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FFCP PHASE1:Mm9::chr11:59953459..59953527,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19377
|EntrezGene=19377
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=Q61818,Q5QGZ6,B1AU86
|UniProt=Q61818,Q5QGZ6,B1AU86
|association_with_transcript=-56bp_to_ENSMUST00000171108,NM_001037764,uc007jfl.1,uc007jfm.1_5end
|association_with_transcript=-56bp_to_ENSMUST00000171108,NM_001037764,uc007jfl.1,uc007jfm.1_5end
|cluster_id=chr11:59953459..59953527,+
|description=CAGE_peak_5_at_Rai1_5end
|description=CAGE_peak_5_at_Rai1_5end
|id=chr11:59953459..59953527,+
|id=chr11:59953459..59953527,+
|ontology_enrichment_celltype=CL:0000540!3.84e-11!33;CL:0000047!3.84e-11!33;CL:0000031!3.84e-11!33;CL:0000404!3.84e-11!33;CL:0000117!5.83e-11!23;CL:0000337!5.83e-11!23;CL:0000221!1.07e-10!44;CL:0000133!1.07e-10!44;CL:0002319!1.18e-10!43;CL:0000393!5.63e-08!39;CL:0000211!5.63e-08!39;CL:0000055!1.91e-07!50
|ontology_enrichment_celltype=CL:0000540!3.84e-11!33;CL:0000047!3.84e-11!33;CL:0000031!3.84e-11!33;CL:0000404!3.84e-11!33;CL:0000117!5.83e-11!23;CL:0000337!5.83e-11!23;CL:0000221!1.07e-10!44;CL:0000133!1.07e-10!44;CL:0002319!1.18e-10!43;CL:0000393!5.63e-08!39;CL:0000211!5.63e-08!39;CL:0000055!1.91e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,8.92e-12,23;CL:0000337,8.92e-12,23;CL:0000540,3.73e-11,33;CL:0000047,3.73e-11,33;CL:0000031,3.73e-11,33;CL:0000404,3.73e-11,33;CL:0000221,4.09e-10,44;CL:0000133,4.09e-10,44;CL:0002319,4.67e-10,43;CL:0000393,7.86e-08,39;CL:0000211,7.86e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.65e-25!73;UBERON:0005743!2.65e-25!73;UBERON:0000073!3.82e-24!75;UBERON:0001016!3.82e-24!75;UBERON:0002346!2.49e-23!71;UBERON:0003075!2.49e-23!71;UBERON:0007284!2.49e-23!71;UBERON:0001049!3.81e-21!52;UBERON:0005068!3.81e-21!52;UBERON:0006241!3.81e-21!52;UBERON:0007135!3.81e-21!52;UBERON:0004121!4.03e-21!102;UBERON:0000924!4.03e-21!102;UBERON:0006601!4.03e-21!102;UBERON:0003056!2.55e-19!49;UBERON:0000955!1.09e-18!50;UBERON:0006238!1.09e-18!50;UBERON:0000033!1.33e-18!63;UBERON:0002616!4.15e-18!49;UBERON:0003080!6.55e-18!40;UBERON:0002780!1.65e-17!39;UBERON:0001890!1.65e-17!39;UBERON:0006240!1.65e-17!39;UBERON:0002020!4.17e-15!34;UBERON:0002791!1.37e-12!29;UBERON:0003528!1.37e-12!29;UBERON:0001893!1.37e-12!29;UBERON:0000153!8.17e-10!94;UBERON:0007811!1.06e-09!86;UBERON:0000956!1.16e-09!21;UBERON:0001869!1.16e-09!21;UBERON:0000203!1.16e-09!21;UBERON:0002619!2.03e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.46e-26,73;UBERON:0002346,4.13e-25,64;UBERON:0003075,4.13e-25,64;UBERON:0007284,4.13e-25,64;UBERON:0001016,2.38e-24,75;UBERON:0001049,2.30e-22,52;UBERON:0005068,2.30e-22,52;UBERON:0006241,2.30e-22,52;UBERON:0007135,2.30e-22,52;UBERON:0000073,5.41e-22,54;UBERON:0003056,7.33e-21,49;UBERON:0004121,1.05e-20,95;UBERON:0000924,1.05e-20,95;UBERON:0006601,1.05e-20,95;UBERON:0000955,1.20e-19,47;UBERON:0006238,1.20e-19,47;UBERON:0003080,2.49e-19,40;UBERON:0002616,5.11e-19,46;UBERON:0002780,6.82e-19,39;UBERON:0001890,6.82e-19,39;UBERON:0006240,6.82e-19,39;UBERON:0010371,6.85e-19,73;UBERON:0010314,8.17e-18,92;UBERON:0002020,2.79e-16,34;UBERON:0003528,1.52e-13,29;UBERON:0002791,1.52e-13,29;UBERON:0001893,1.52e-13,29;UBERON:0000956,2.29e-10,21;UBERON:0001869,2.29e-10,21;UBERON:0000203,2.29e-10,21;UBERON:0002619,6.27e-08,17
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0.129123323441576,0.563154888606667,0,0,0,0,0.0874204024189974,0,0,0.699561878128147,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.202753862439029,1.65192076945513,4.69434806608824,0.872100625521786,2.41654801007919,1.74986909166855,2.79972843250725,1.43752564364972,0,0,2.35265659399725,0.514518872071894,0,0,11.9366711907163,13.7537654610729,18.3811107016792,2.71075625655306,8.00365316500025,0.449949858640699,0,0.7104801149461,2.39680088414724,6.14749288514487,16.7977171939734,14.9856591548177,15.984697062705,5.71301968807607,6.40518768759679,15.1888591026543,20.6067762689208,28.4957823849107,1.10115880999389,2.80912143787413,3.22573719838111,15.5625819521629,13.0827330351446,10.4182674111352,1.95428099300967,1.12552522006336,3.51435969886663,8.2496003932627,4.27115042397309,8.57437450796383,0.454357159999104,0.302286240427142,0.579728977403356,0,0,0.539703191637817,0,0,0.421333260395256,0.511290967734173,1.03914401841148,0,2.25349471642689,0,2.54805239706646,7.11066703153331,1.08245520505607,1.26679932737549,1.51657333504435,0,0,1.63286352971307,2.60227990149204,2.13125834818499,1.84492397804847,1.65794904607885,2.70454026412121,1.0053327306374,2.71914464507811,0.289198713839823,0,1.13236794963186,0.220841518460394,0.969750506270444,0,2.63502717310392,2.72280718857492,0,0,0,0,4.94309110035915,14.1825186873774,22.4921290282027,4.69325664519146,5.11430914660661,5.61027720310812,7.62533936418461,2.03678727700633,0.124406970610093,0.505445516867349,1.47309299120532,3.513251959993,2.5289231487682,3.42118046630164,2.86339153887859,4.49040894398764,3.20284300712124,5.80950692270319,1.81092359517311,7.32931175971664,6.61871280587367,3.87092473160687,1.31517439456545,1.11218899690239,0.348252166522167,1.02891068203972,3.58261680273288,0,0,0,3.72826390563903,5.15957331958412,3.06105504483725,3.55117103377815,2.36117078096885,2.31400669331067,2.32533944750408,0.804820204198858,0.817357396570186,0.658239399653922,0,0.162137619091711,0,0.219550115291051,0.268412837520744,6.51898840548794,12.0398396483763,0,0,5.97207101498655,5.10920678092965,3.09281907173024,1.00841762311671,0.444756087689741,0.760902504450237,0,0.658795818896044,0,1.59165177632921,0.38992817423824,0.898819408654221,0.216138049874694,0.199141273254367,2.0863469104839,2.39921876480431,1.1270773567308,1.62921062276251,1.55161989734101,1.61312385747733,0.632365371242573,0.147610147979602,0.156998727841375,0,0.296452627087149,1.33476084572875,0.786235980452812,0.674586337154561,0.202860121388503,0.241177159752417,0.763877555344259,0,0.324270453550071,0,2.87536413054709,0,0.312037673114561,0.252578877947112,0,0,0.369506380333209,2.08440552947533,3.25929952884052,1.35796068620151,3.75504397261603,3.1826188913945,1.42826184531608,0.975668239288994,0.788175720530955,0.44292937929755,0.797273843287435,0.327726629431476,0.345369963731791,0.723245292907558,1.50791283939272,0,0,0.275936746304732,3.53211297973142,1.52375192569864,0,0,3.47059041357882,4.29482618726302,2.80050417052639,0.955875191810208,2.22798674082394,1.98153571552183,1.61924280669958,3.21481443702443,6.32460444714438,6.74774764485795,3.40656204499845,1.95872164033981,1.79175655288934,2.3095817216155,0,0.728341908464944,2.11626489875326,0.565815239267694,0.295301892880773,1.84461088766356,0,0,1.42598951353889,0,0,0,6.80879211507576,5.221771726908,7.76152102696527,6.64444808597936,5.67488747655275,6.0645397984704,4.60737257685939,5.48036908406279,3.05073220482823,6.14313005505079,0.441056796109924,0,0.161464426695906,0.482503399425247,0.358117032009409,0.164140899745061,0,4.82105785227325,0.341741761595705,1.23832120777933,0.740778109478847,0,0.136694227721025,0,1.35982743995084,0.419854356970974,1.10559979043539,0.954670618015114,3.16335993581135,1.82987520414164,1.83609079397062,2.92723614420256,2.62035076495413,2.42755823492677,2.0663363931334,0.26175594198403,0,0,0.56369293868419,4.9340460194513,4.96375471371293,5.25018208528929,4.26227417476513,7.60302564708502,6.10257640957921,5.7289929331338,5.03324853243412,1.93267296660805,0.864090018773596,0,2.02725215290164,0.924398614483445,0.77952493786677,1.07416017400489,1.19208812868759,0.600977247599844,0.147689527174577,0.403865799792591,0.228620419965,0,0.292373642219257,0.192423683280659,0,0.680191150845634,7.10355050797007,13.5467923480308,6.71538465456314,4.056981474676,1.50145980360946,4.76194223094889,1.07184189539533,1.00314420807073,6.21227026878773,5.9842280745933,5.72895513439397,4.29632955859219,4.7955776383945,3.7769694869485,3.37511250115903,4.05289082901798,2.26571204492102,6.21312374102184,3.63255716544618,7.98049746802062,6.4878770186571,4.86213434136588,5.03071590307158,2.38996560985018,1.33348036680969,2.26638562962784,2.88827288632634,1.51618327058278,2.78827229879264,1.32038438970253,2.71560371662659,2.04880487695582,1.89537047553524,3.33405583898152,2.0859178670074,1.35036454324594,3.70877310722976,2.06078488188156,3.08582327146874,1.774758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|short_description=p5@Rai1
|short_description=p5@Rai1
}}
}}

Latest revision as of 19:51, 1 October 2015

Short description:p5@Rai1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Rai1_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: -56bp_to_ENSMUST00000171108, NM_001037764, uc007jfl.1, uc007jfm.1_5end
EntrezGene:Rai1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Rai1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.65
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.80
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C311.94
Mouse Granule cells, donor2.CNhs12357.11731-123E313.75
Mouse Granule cells, donor3.CNhs12108.11636-122C718.38
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E86.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D516.80
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F514.99
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D915.98
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.41
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D215.19
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F220.61
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D628.50
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D415.56
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F413.08
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.42
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.51
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.25
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.57
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C52.60
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C12.70
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A82.72
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.64
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.94
corpus striatum, adult.CNhs10487.19-21D814.18
corpus striatum, neonate N00.CNhs11226.630-43F122.49
cortex, adult.CNhs10473.12-14D54.69
cortex, neonate N30.CNhs11107.1392-42F25.11
diencephalon, adult.CNhs10482.20-12F25.61
diencephalon, neonate N30.CNhs11201.1388-42B27.63
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.04
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C63.51
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C93.42
eyeball, embryo E17.CNhs11023.1261-18D42.86
eyeball, neonate N00.CNhs11207.633-15C64.49
eyeball, neonate N01.CNhs11140.1532-43E73.20
eyeball, neonate N02.CNhs11205.1551-44G85.81
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E27.33
forelimb, embryo E12.CNhs10600.359-14H26.62
forelimb, embryo E13.CNhs10589.384-1E23.87
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I63.58
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E93.73
heart, embryo E12.CNhs11015.353-12F55.16
heart, embryo E13.CNhs11013.376-3I93.06
heart, embryo E14.CNhs10597.403-26D43.55
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C62.31
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E86.52
hippocampus, neonate N00.CNhs11228.627-43G112.04
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I55.97
intestine, embryo E13.CNhs11010.381-16D55.11
intestine, embryo E15.CNhs10602.976-16D83.09
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F82.40
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G71.61
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F83.26
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B63.76
lung, embryo E17.CNhs10605.480-44A63.18
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C23.53
medulla oblongata, neonate N30.CNhs11200.1396-42A31.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.32
olfactory brain, adult.CNhs10489.18-22I96.75
ovary, adult.CNhs10507.91-2I73.41
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I41.79
oviduct, adult pregnant day01.CNhs10500.988-6G62.31
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G86.81
pituitary gland, embryo E12.CNhs11018.346-16E65.22
pituitary gland, embryo E13.CNhs11009.370-44C77.76
pituitary gland, embryo E14.CNhs11037.398-44A56.64
pituitary gland, embryo E15.CNhs10592.427-16B95.67
pituitary gland, embryo E16.CNhs11036.449-43F66.06
pituitary gland, embryo E17.CNhs11039.1265-44F54.61
pituitary gland, neonate N00.CNhs11190.1308-22E95.48
placenta, adult pregnant day10.CNhs10472.539-13I73.05
placenta, adult pregnant day17.CNhs10464.577-18G36.14
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.82
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E33.16
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D41.84
stomach, embryo E17.CNhs11006.1035-18D52.93
stomach, embryo E18.CNhs10999.1286-20C62.62
stomach, neonate N03.CNhs11193.1340-24B82.43
stomach, neonate N07.CNhs11210.718-18A92.07
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F54.93
testis, embryo E15.CNhs11034.443-27C54.96
testis, embryo E16.CNhs11033.470-26G55.25
testis, embryo E17.CNhs11029.486-18I54.26
testis, embryo E18.CNhs11027.503-18G57.60
testis, neonate N00.CNhs11189.1300-22B76.10
testis, neonate N07.CNhs11222.726-26I45.73
testis, neonate N10.CNhs11204.763-44D95.03
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.10
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F713.55
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G56.72
urinary bladder, adult.CNhs10481.879-12E44.06
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E54.76
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.30
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I83.63
whole body, embryo E12.CNhs10587.857-27C97.98
whole body, embryo E13.CNhs10512.372-23H26.49
whole body, embryo E14.5.CNhs10578.420-27D24.86
whole body, embryo E14.CNhs10519.395-14B15.03
whole body, embryo E16.CNhs10514.453-14F22.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.92
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F92.51
whole body, embryo E17.CNhs10517.475-3I56.50
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)8.92e-1223
neuroblast (sensu Vertebrata)8.92e-1223
neuron3.73e-1133
neuronal stem cell3.73e-1133
neuroblast3.73e-1133
electrically signaling cell3.73e-1133
ectodermal cell4.09e-1044
neurectodermal cell4.09e-1044
neural cell4.67e-1043
electrically responsive cell7.86e-0839
electrically active cell7.86e-0839

Uber anatomy
Ontology termp-valuen
central nervous system5.46e-2673
neurectoderm4.13e-2564
neural plate4.13e-2564
presumptive neural plate4.13e-2564
nervous system2.38e-2475
neural tube2.30e-2252
neural rod2.30e-2252
future spinal cord2.30e-2252
neural keel2.30e-2252
regional part of nervous system5.41e-2254
pre-chordal neural plate7.33e-2149
ectoderm-derived structure1.05e-2095
ectoderm1.05e-2095
presumptive ectoderm1.05e-2095
brain1.20e-1947
future brain1.20e-1947
anterior neural tube2.49e-1940
regional part of brain5.11e-1946
regional part of forebrain6.82e-1939
forebrain6.82e-1939
future forebrain6.82e-1939
ecto-epithelium6.85e-1973
structure with developmental contribution from neural crest8.17e-1892
gray matter2.79e-1634
brain grey matter1.52e-1329
regional part of telencephalon1.52e-1329
telencephalon1.52e-1329
cerebral cortex2.29e-1021
cerebral hemisphere2.29e-1021
pallium2.29e-1021
regional part of cerebral cortex6.27e-0817
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