FFCP PHASE1:Mm9::chr1:95651346..95651383,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67026 | |EntrezGene=67026 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000027500_5end | |association_with_transcript=0bp_to_ENSMUST00000027500_5end | ||
|cluster_id=chr1:95651346..95651383,- | |||
|description=CAGE_peak_3_at_Thap4_5end | |description=CAGE_peak_3_at_Thap4_5end | ||
|id=chr1:95651346..95651383,- | |id=chr1:95651346..95651383,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.03e-08!45;UBERON:0003061!1.03e-08!45;UBERON:0004177!1.21e-08!29;UBERON:0002193!3.96e-08!48;UBERON:0002370!1.02e-07!23;UBERON:0000974!1.02e-07!23;UBERON:0004807!1.02e-07!23;UBERON:0005058!1.02e-07!23;UBERON:0003351!1.02e-07!23;UBERON:0009113!1.02e-07!23;UBERON:0003295!1.02e-07!23;UBERON:0009722!1.02e-07!23;UBERON:0005562!1.02e-07!23;UBERON:0007690!1.02e-07!23;UBERON:0006562!5.06e-07!24;UBERON:0001557!5.06e-07!24;UBERON:0001042!5.06e-07!24;UBERON:0008814!5.06e-07!24;UBERON:0009145!5.06e-07!24;UBERON:0000490!7.58e-07!66;UBERON:0000072!8.11e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.42e-09,29;UBERON:0005057,1.42e-09,29;UBERON:0002390,1.91e-09,45;UBERON:0003061,1.91e-09,45;UBERON:0002370,1.27e-08,23;UBERON:0000974,1.27e-08,23;UBERON:0004807,1.27e-08,23;UBERON:0005058,1.27e-08,23;UBERON:0003351,1.27e-08,23;UBERON:0009113,1.27e-08,23;UBERON:0003295,1.27e-08,23;UBERON:0009722,1.27e-08,23;UBERON:0005562,1.27e-08,23;UBERON:0007690,1.27e-08,23;UBERON:0002193,1.45e-08,48;UBERON:0002405,1.45e-08,48;UBERON:0006562,8.64e-08,24;UBERON:0003408,8.64e-08,24;UBERON:0001557,8.64e-08,24;UBERON:0001042,8.64e-08,24;UBERON:0008814,8.64e-08,24;UBERON:0009145,8.64e-08,24;UBERON:0000077,1.14e-07,35;UBERON:0000490,1.41e-07,66;UBERON:0000072,1.53e-07,27;UBERON:0003929,6.00e-07,55 | |||
|phase1_expression=1.28119077683835,1.39590163055744,1.81999695755814,2.41971369045464,2.00358291978539,2.01455126294268,2.10251376535973,3.22808308603941,4.08287294239834,5.14941957908386,4.28044920563762,4.78632953972018,2.05440875917447,2.01066925563694,2.99798785634096,1.01237633694913,0.699561878128147,2.05050407482854,1.37114433605739,1.27316895539409,4.33720779770456,1.48936426801328,1.56719873483361,0.799962113967033,2.06468352960453,0.57423196411502,1.29228598847722,1.72376986148711,0.760093677825496,1.51218077855958,1.99557459589774,0.635030673459631,1.84519436275371,0,2.3108129580102,3.32469290716985,2.45003227514843,5.4409111995798,2.3440060335714,3.14114246384279,6.47054636834116,5.46436387966757,4.36959317728038,2.01434908760924,1.92616169317078,0.917733760808408,2.34717403304412,0,0.219686182734472,0.777719596297134,1.53985063787899,2.87505128729943,1.17447824240415,2.17608642603403,0.672187598284928,1.28629718017973,1.71920063963254,0.515672092277442,0.404632921719196,0,1.90149421051854,1.35537812827653,2.66788438833342,1.3498495759221,0.988866362566974,2.8419204597844,1.79760066311043,1.53687322128622,1.76272340924412,1.4850653216486,1.89292465216244,0,0.883474163806454,2.20483438586917,2.49198224647415,2.75765635983006,0,0.383062014255563,0.614426133024974,1.31886287730194,0.640413505216868,0,0.279182999001381,1.12552522006336,0,0.883885756421003,0.996601765593721,0.745597783301202,2.04460721999597,1.28471652181535,0.579728977403356,0,3.39985666853875,1.61910957491345,1.29955283489534,0.896053774194671,0.842666520790511,2.38602451609281,0,1.06001872353102,1.26759077799012,1.28326477414318,0,0,1.73192832808971,1.77351905832569,1.01104889002957,1.7127581957859,0.776813650941515,0.445326417194474,2.4287945747259,0.304465478312141,1.61430848079241,0.904335843315735,0.705532242814229,0.251333182659351,0.988779870937496,1.44599356919912,0.884610551949874,1.29413479957927,0.662524555381181,1.93950101254089,1.86391761218122,0.292780797011547,0.41889341362691,1.02182822083437,4.31334448221313,0.599902730993408,4.44745794755726,0.149790639404823,0.457500602818626,2.63874139437015,0.347648640384553,0,0.20778804455956,0.324482526135515,1.62942982160506,1.24406970610093,1.0108910337347,1.68353484709179,0.910843100738926,1.14951052216736,0.720248519221397,1.35634336052144,1.2246569847239,1.2811372028485,1.49922759295566,0.776110112217047,3.88022387279116,2.83659120251729,1.23165786914764,1.7535658594206,2.22437799380478,2.43776516565517,1.02891068203972,0.995171334092466,2.80885274925294,3.60287069960601,3.12579849335152,1.44988040774851,2.11073453982987,1.62055855314913,1.18372367792605,1.77087808572663,1.07986979021165,1.62773761325285,1.07309360559848,0.817357396570186,0.329119699826961,0.820837320395476,0.972825714550269,0,0.878200461164203,0.536825675041487,0,0.720332286654991,1.32167513193519,1.32225283331772,0.426576501070468,0.696710015581316,2.19074684247559,1.81515172161008,1.11189021922435,0.951128130562796,0.949058123089023,0.823494773620054,1.25667604400135,1.39269530428806,1.75467678407208,0.898819408654221,1.29682829924817,1.59313018603494,2.27601481143698,1.14248512609729,3.38123207019241,1.4255592949172,2.13347735884388,1.75339549725796,1.13825766823663,0.885660887877613,0.941992367048249,1.35736880313981,0.889357881261447,2.33583148002532,2.16214894624523,1.79889689907883,1.42002084971952,1.92941727801933,1.2731292589071,3.74004978686054,1.13494658742525,1.09824565275233,0,0.372140947668503,0,0.757736633841335,0.358794827043824,2.41221760681684,0.739012760666419,1.13694847062291,1.46668478797823,2.03694102930226,1.64283173801951,0.837531287209079,0.476087281772027,0.780534591431195,2.04925687338048,1.55025282754142,0.478364305972461,0.327726629431476,0.345369963731791,0.433947175744535,1.50791283939272,0,0.491764273019036,0.827810238914197,0.80275294993896,0.35163505977661,2.29508923527346,0.757412781613119,0.631016438832513,1.17131623288992,1.50796378412959,1.19484398976276,1.78238939265915,1.13230612315533,0.809621403349789,0.584511715822624,0.395287777946524,0.321321316421807,1.56134093729095,1.06839362200353,1.14020871547503,0.494910368917606,0,1.69946445308487,1.51161778482376,0.943025398779491,1.18120757152309,0.922305443831782,1.55056975900933,0.727067458955011,0.356497378384721,0.316036757935816,0,3.09406629744561,0.340439605753788,1.44048875225048,0.517434735131018,1.50035924522115,0.532020700926821,1.24858172321449,0.493647061806363,0.304464949114599,2.3467170806371,1.90648863777438,1.10264199027481,1.31909002353184,1.93757312035087,2.17126529741361,2.26807453605959,1.80554989719567,0.291480836629851,0.18542530201051,2.56306321196779,1.23832120777933,1.48155621895769,2.26042148405629,2.1871076435364,2.0590035588587,1.35982743995084,1.81936888020755,1.79659965945751,0,2.05618395827738,1.01659733563424,0.540026704109006,1.25452977608681,1.09181281873089,0.809186078308924,1.1571483801547,1.04702376793612,1.94422459937689,0,41.1495845239459,1.64468200648377,1.48912641411388,1.16670713006429,1.16243841129958,1.01373675294467,2.8165737274981,1.17183946359555,3.14578033277133,8.21386010808421,14.1134703066354,2.8441000856536,1.82452693761148,2.05421914329655,2.33857481360031,2.68540043501222,2.78153896693771,3.846254384639,4.13530676088816,3.33189284828887,3.27689268616499,3.62974266492626,3.31356794515158,2.50150788264857,3.15567635890236,0.680191150845634,3.7737612073591,6.2799699626633,1.84673078000486,0.579568782096571,1.87682475451182,1.28206136987086,0.643105137237198,0,0,0.460325236507177,1.71868654031819,0.343706364687375,0,0.755393897389701,0,0.900642406448441,0.453142408984205,0.51776031175182,1.764384908931,1.99512436700516,0.682934423016537,1.21553358534147,2.09613162627982,1.10306105070008,2.44471400581777,2.47242068686673,1.92551525755089,1.51618327058278,1.2673964994512,1.32038438970253,0.936415074698824,0.448176066834085,0.746661096422973,1.90517476513229,0.579421629724277,0.77163688185482,2.06042950401653,0.735994600671987,0.685738504770831,0.532427418478012,1.66905332963125,1.74415699958794,0.941093804153306,1.35383372626682,0.73171189149109,1.31534855718921,0.814824683075171,2.80571135828869,1.06771516311757,0.886540341380071,0.409231043169689,1.54936841185966,1.15743966588685,2.24829520144151,1.16965804222704,1.07435527024149,0.956441660344217,1.54413993383661,1.62307484934295 | |phase1_expression=1.28119077683835,1.39590163055744,1.81999695755814,2.41971369045464,2.00358291978539,2.01455126294268,2.10251376535973,3.22808308603941,4.08287294239834,5.14941957908386,4.28044920563762,4.78632953972018,2.05440875917447,2.01066925563694,2.99798785634096,1.01237633694913,0.699561878128147,2.05050407482854,1.37114433605739,1.27316895539409,4.33720779770456,1.48936426801328,1.56719873483361,0.799962113967033,2.06468352960453,0.57423196411502,1.29228598847722,1.72376986148711,0.760093677825496,1.51218077855958,1.99557459589774,0.635030673459631,1.84519436275371,0,2.3108129580102,3.32469290716985,2.45003227514843,5.4409111995798,2.3440060335714,3.14114246384279,6.47054636834116,5.46436387966757,4.36959317728038,2.01434908760924,1.92616169317078,0.917733760808408,2.34717403304412,0,0.219686182734472,0.777719596297134,1.53985063787899,2.87505128729943,1.17447824240415,2.17608642603403,0.672187598284928,1.28629718017973,1.71920063963254,0.515672092277442,0.404632921719196,0,1.90149421051854,1.35537812827653,2.66788438833342,1.3498495759221,0.988866362566974,2.8419204597844,1.79760066311043,1.53687322128622,1.76272340924412,1.4850653216486,1.89292465216244,0,0.883474163806454,2.20483438586917,2.49198224647415,2.75765635983006,0,0.383062014255563,0.614426133024974,1.31886287730194,0.640413505216868,0,0.279182999001381,1.12552522006336,0,0.883885756421003,0.996601765593721,0.745597783301202,2.04460721999597,1.28471652181535,0.579728977403356,0,3.39985666853875,1.61910957491345,1.29955283489534,0.896053774194671,0.842666520790511,2.38602451609281,0,1.06001872353102,1.26759077799012,1.28326477414318,0,0,1.73192832808971,1.77351905832569,1.01104889002957,1.7127581957859,0.776813650941515,0.445326417194474,2.4287945747259,0.304465478312141,1.61430848079241,0.904335843315735,0.705532242814229,0.251333182659351,0.988779870937496,1.44599356919912,0.884610551949874,1.29413479957927,0.662524555381181,1.93950101254089,1.86391761218122,0.292780797011547,0.41889341362691,1.02182822083437,4.31334448221313,0.599902730993408,4.44745794755726,0.149790639404823,0.457500602818626,2.63874139437015,0.347648640384553,0,0.20778804455956,0.324482526135515,1.62942982160506,1.24406970610093,1.0108910337347,1.68353484709179,0.910843100738926,1.14951052216736,0.720248519221397,1.35634336052144,1.2246569847239,1.2811372028485,1.49922759295566,0.776110112217047,3.88022387279116,2.83659120251729,1.23165786914764,1.7535658594206,2.22437799380478,2.43776516565517,1.02891068203972,0.995171334092466,2.80885274925294,3.60287069960601,3.12579849335152,1.44988040774851,2.11073453982987,1.62055855314913,1.18372367792605,1.77087808572663,1.07986979021165,1.62773761325285,1.07309360559848,0.817357396570186,0.329119699826961,0.820837320395476,0.972825714550269,0,0.878200461164203,0.536825675041487,0,0.720332286654991,1.32167513193519,1.32225283331772,0.426576501070468,0.696710015581316,2.19074684247559,1.81515172161008,1.11189021922435,0.951128130562796,0.949058123089023,0.823494773620054,1.25667604400135,1.39269530428806,1.75467678407208,0.898819408654221,1.29682829924817,1.59313018603494,2.27601481143698,1.14248512609729,3.38123207019241,1.4255592949172,2.13347735884388,1.75339549725796,1.13825766823663,0.885660887877613,0.941992367048249,1.35736880313981,0.889357881261447,2.33583148002532,2.16214894624523,1.79889689907883,1.42002084971952,1.92941727801933,1.2731292589071,3.74004978686054,1.13494658742525,1.09824565275233,0,0.372140947668503,0,0.757736633841335,0.358794827043824,2.41221760681684,0.739012760666419,1.13694847062291,1.46668478797823,2.03694102930226,1.64283173801951,0.837531287209079,0.476087281772027,0.780534591431195,2.04925687338048,1.55025282754142,0.478364305972461,0.327726629431476,0.345369963731791,0.433947175744535,1.50791283939272,0,0.491764273019036,0.827810238914197,0.80275294993896,0.35163505977661,2.29508923527346,0.757412781613119,0.631016438832513,1.17131623288992,1.50796378412959,1.19484398976276,1.78238939265915,1.13230612315533,0.809621403349789,0.584511715822624,0.395287777946524,0.321321316421807,1.56134093729095,1.06839362200353,1.14020871547503,0.494910368917606,0,1.69946445308487,1.51161778482376,0.943025398779491,1.18120757152309,0.922305443831782,1.55056975900933,0.727067458955011,0.356497378384721,0.316036757935816,0,3.09406629744561,0.340439605753788,1.44048875225048,0.517434735131018,1.50035924522115,0.532020700926821,1.24858172321449,0.493647061806363,0.304464949114599,2.3467170806371,1.90648863777438,1.10264199027481,1.31909002353184,1.93757312035087,2.17126529741361,2.26807453605959,1.80554989719567,0.291480836629851,0.18542530201051,2.56306321196779,1.23832120777933,1.48155621895769,2.26042148405629,2.1871076435364,2.0590035588587,1.35982743995084,1.81936888020755,1.79659965945751,0,2.05618395827738,1.01659733563424,0.540026704109006,1.25452977608681,1.09181281873089,0.809186078308924,1.1571483801547,1.04702376793612,1.94422459937689,0,41.1495845239459,1.64468200648377,1.48912641411388,1.16670713006429,1.16243841129958,1.01373675294467,2.8165737274981,1.17183946359555,3.14578033277133,8.21386010808421,14.1134703066354,2.8441000856536,1.82452693761148,2.05421914329655,2.33857481360031,2.68540043501222,2.78153896693771,3.846254384639,4.13530676088816,3.33189284828887,3.27689268616499,3.62974266492626,3.31356794515158,2.50150788264857,3.15567635890236,0.680191150845634,3.7737612073591,6.2799699626633,1.84673078000486,0.579568782096571,1.87682475451182,1.28206136987086,0.643105137237198,0,0,0.460325236507177,1.71868654031819,0.343706364687375,0,0.755393897389701,0,0.900642406448441,0.453142408984205,0.51776031175182,1.764384908931,1.99512436700516,0.682934423016537,1.21553358534147,2.09613162627982,1.10306105070008,2.44471400581777,2.47242068686673,1.92551525755089,1.51618327058278,1.2673964994512,1.32038438970253,0.936415074698824,0.448176066834085,0.746661096422973,1.90517476513229,0.579421629724277,0.77163688185482,2.06042950401653,0.735994600671987,0.685738504770831,0.532427418478012,1.66905332963125,1.74415699958794,0.941093804153306,1.35383372626682,0.73171189149109,1.31534855718921,0.814824683075171,2.80571135828869,1.06771516311757,0.886540341380071,0.409231043169689,1.54936841185966,1.15743966588685,2.24829520144151,1.16965804222704,1.07435527024149,0.956441660344217,1.54413993383661,1.62307484934295 | ||
|short_description=p3@Thap4 | |short_description=p3@Thap4 | ||
}} | }} |
Latest revision as of 20:12, 1 October 2015
Short description: | p3@Thap4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Thap4_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000027500_5end |
EntrezGene: | Thap4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.42e-09 | 29 |
immune organ | 1.42e-09 | 29 |
hematopoietic system | 1.91e-09 | 45 |
blood island | 1.91e-09 | 45 |
thymus | 1.27e-08 | 23 |
neck | 1.27e-08 | 23 |
respiratory system epithelium | 1.27e-08 | 23 |
hemolymphoid system gland | 1.27e-08 | 23 |
pharyngeal epithelium | 1.27e-08 | 23 |
thymic region | 1.27e-08 | 23 |
pharyngeal gland | 1.27e-08 | 23 |
entire pharyngeal arch endoderm | 1.27e-08 | 23 |
thymus primordium | 1.27e-08 | 23 |
early pharyngeal endoderm | 1.27e-08 | 23 |
hemolymphoid system | 1.45e-08 | 48 |
immune system | 1.45e-08 | 48 |
pharynx | 8.64e-08 | 24 |
gland of gut | 8.64e-08 | 24 |
upper respiratory tract | 8.64e-08 | 24 |
chordate pharynx | 8.64e-08 | 24 |
pharyngeal arch system | 8.64e-08 | 24 |
pharyngeal region of foregut | 8.64e-08 | 24 |
mixed endoderm/mesoderm-derived structure | 1.14e-07 | 35 |
unilaminar epithelium | 1.41e-07 | 66 |
segment of respiratory tract | 1.53e-07 | 27 |
gut epithelium | 6.00e-07 | 55 |