FFCP PHASE1:Mm9::chrX:35464090..35464097,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chrX:35464090..35464097,- to FFCP PHASE1:Mm9::chrX:35464090..35464097,-: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=382282 | |EntrezGene=382282 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=150 | |||
|TSSclassifier=NA | |||
|UniProt=Q4TU81 | |UniProt=Q4TU81 | ||
|association_with_transcript=-6bp_to_ENSMUST00000096453,NM_001025083,uc009szn.1_5end | |||
|cluster_id=chrX:35464090..35464097,- | |||
|description=CAGE_peak_1_at_Rhox12_5end | |||
|id=chrX:35464090..35464097,- | |||
|ontology_enrichment_celltype=CL:0000349!6.51e-17!3;CL:0000351!6.51e-17!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.68e-24,3;CL:0000351,6.68e-24,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.15e-17!3;UBERON:0000478!2.15e-17!3;UBERON:0000158!2.15e-17!3;UBERON:0000358!6.51e-17!3;UBERON:0000307!6.51e-17!3;UBERON:0005795!4.17e-13!4;UBERON:0000995!4.17e-13!4;UBERON:0001987!2.99e-12!2;UBERON:0003124!2.99e-12!2;UBERON:0004340!2.99e-12!2;UBERON:0003975!1.38e-10!5;UBERON:0002370!3.73e-10!23;UBERON:0000974!3.73e-10!23;UBERON:0004807!3.73e-10!23;UBERON:0005058!3.73e-10!23;UBERON:0003351!3.73e-10!23;UBERON:0009113!3.73e-10!23;UBERON:0003295!3.73e-10!23;UBERON:0009722!3.73e-10!23;UBERON:0005562!3.73e-10!23;UBERON:0007690!3.73e-10!23;UBERON:0006562!1.05e-09!24;UBERON:0003408!1.05e-09!24;UBERON:0001557!1.05e-09!24;UBERON:0001042!1.05e-09!24;UBERON:0008814!1.05e-09!24;UBERON:0009145!1.05e-09!24;UBERON:0000072!1.49e-08!27;UBERON:0004177!6.44e-08!29;UBERON:0003081!7.81e-07!88;UBERON:0000305!8.36e-07!1;UBERON:0003134!8.72e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.35e-53,3;UBERON:0000478,7.35e-53,3;UBERON:0000158,7.35e-53,3;UBERON:0001987,4.23e-36,2;UBERON:0003124,4.23e-36,2;UBERON:0004340,4.23e-36,2;UBERON:0000358,6.68e-24,3;UBERON:0000307,6.68e-24,3;UBERON:0007010,6.68e-24,3;UBERON:0005795,1.16e-18,4;UBERON:0000995,1.16e-18,4;UBERON:0000305,1.74e-18,1;UBERON:0003975,3.73e-15,5;UBERON:0003134,7.26e-10,8;UBERON:0004175,7.02e-09,9;UBERON:0000474,7.02e-09,9;UBERON:0003100,1.94e-07,11;UBERON:0004923,2.29e-07,24;UBERON:0004871,4.77e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3709685157812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.3825231030356,81.1316831408431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0.15241361331,0.201652370273681,0,0.384847366561318,0.350630706544707,0,3.10780334723691,0.448569283047378,13.4307693091263,0,0.93841237725591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3709685157812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.3825231030356,81.1316831408431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0.15241361331,0.201652370273681,0,0.384847366561318,0.350630706544707,0,3.10780334723691,0.448569283047378,13.4307693091263,0,0.93841237725591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@Rhox12 | |||
}} | }} |
Latest revision as of 20:15, 1 October 2015
Short description: | p1@Rhox12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rhox12_5end |
Coexpression cluster: | MCL_coexpression_mm9:150 |
Association with transcript: | -6bp_to_ENSMUST00000096453, NM_001025083, uc009szn.1_5end |
EntrezGene: | Rhox12 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.68e-24 | 3 |
trophoblast cell | 6.68e-24 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.35e-53 | 3 |
extraembryonic structure | 7.35e-53 | 3 |
membranous layer | 7.35e-53 | 3 |
placenta | 4.23e-36 | 2 |
chorion | 4.23e-36 | 2 |
allantois | 4.23e-36 | 2 |
blastocyst | 6.68e-24 | 3 |
blastula | 6.68e-24 | 3 |
cleaving embryo | 6.68e-24 | 3 |
embryonic uterus | 1.16e-18 | 4 |
uterus | 1.16e-18 | 4 |
amnion | 1.74e-18 | 1 |
internal female genitalia | 3.73e-15 | 5 |
female reproductive organ | 7.26e-10 | 8 |
internal genitalia | 7.02e-09 | 9 |
female reproductive system | 7.02e-09 | 9 |
female organism | 1.94e-07 | 11 |
organ component layer | 2.29e-07 | 24 |
somatic layer of lateral plate mesoderm | 4.77e-07 | 3 |