FFCP PHASE1:Mm9::chrX:35917464..35917511,-: Difference between revisions
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{{FFCP|EntrezGene=72584|HGNC=|MCL_coexpression_id=121|UniProt=|association_with_transcript=327bp_to_ENSMUST00000147129,uc009tab.1_5end|description=CAGE_peak_5_at_Cul4b_5end|id=chrX:35917464..35917511,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.64e-08!71;UBERON:0003075!3.64e-08!71;UBERON:0007284!3.64e-08!71;UBERON:0001049!6.18e-08!52;UBERON:0005068!6.18e-08!52;UBERON:0006241!6.18e-08!52;UBERON:0007135!6.18e-08!52;UBERON:0000955!1.35e-07!50;UBERON:0006238!1.35e-07!50;UBERON:0000033!1.86e-07!63;UBERON:0002616!3.34e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.49e-09,54;UBERON:0001049,1.42e-08,52;UBERON:0005068,1.42e-08,52;UBERON:0006241,1.42e-08,52;UBERON:0007135,1.42e-08,52;UBERON:0010314,8.47e-08,92;UBERON:0002346,1.04e-07,64;UBERON:0003075,1.04e-07,64;UBERON:0007284,1.04e-07,64;UBERON:0000955,9.16e-07,47;UBERON:0006238,9.16e-07,47|phase1_expression=0.640595388419176,0.348975407639361,0.454999239389536,0.30246421130683,0.500895729946347,0.16787927191189,0.233612640595526,3.22808308603941,0.422366166455,0.936258105287974,0.34243593645101,0.239316476986009,2.05440875917447,2.88487327982691,0,0.404950534779652,0,0.473193248037357,0.685572168028694,0,2.12608225377674,0.397163804803541,0,0.639969691173627,0.22940928106717,0.57423196411502,0.430761996159075,0,0,0.252030129759931,0.443461021310609,0,1.23012957516914,0,0,0.166234645358492,0.204169356262369,2.09265815368454,0.7813353445238,2.61761871986899,2.35292595212406,2.73218193983378,3.88408282424923,5.03587271902309,4.66333883609767,4.58866880404204,0,0.872100625521786,0.219686182734472,1.1665793944457,0.419959264876088,0,0.503347818173209,0,1.34437519656986,0.771778308107841,0.573066879877513,3.09403255366465,1.21389876515759,1.05798195854407,1.90149421051854,0.677689064138264,0,0,1.97773272513395,0,0,0.384218305321555,1.03689612308478,0.540023753326763,1.05162480675691,1.71390590642282,2.65042249141936,0.489963196859816,0.383381884072945,0,5.50579404996943,4.21368215681119,5.06901559745603,1.18697658957174,0.914876436024097,2.6045668527838,3.62937898701795,5.06486349028512,5.04234217663473,5.59794312399969,3.98640706237488,2.23679334990361,0.37863096666592,0.377857800533928,5.50742528533188,2.58127163094416,0.679971333707751,0.539703191637817,0.649776417447669,0,1.54488862144927,1.70430322578058,0.779358013808606,1.06001872353102,0.563373679106722,1.28326477414318,0,0,0,0,0,0.91347103775248,2.58937883647172,1.63286352971307,1.21439728736295,1.21786191324856,1.61430848079241,1.05505848386836,2.4693628498498,2.01066546127481,1.97755974187499,3.90418263683761,0.884610551949874,0.323533699894818,0.441683036920787,1.93950101254089,1.86391761218122,15.2246014446005,14.2423760633149,0.766371165625774,0.479260498023681,0,0.635351135365324,10.1857634795279,5.03250663100489,1.38219787324151,4.69325664519146,3.3243009452943,7.68815764870372,4.38051410282946,1.12023300235348,1.7416975885413,0.758168275301024,1.47309299120532,1.69156575851515,1.14951052216736,0.900310649026746,1.20563854268572,0.884474488967262,1.2811372028485,1.21812241927647,2.58703370739016,1.5089759505299,3.21480336285293,2.11141348996739,1.09597866213787,1.11218899690239,1.0447564995665,1.85203922767149,4.97585667046233,0.702213187313235,0.257347907114715,1.42081749697796,3.10688658803253,2.81431271977315,1.2604344302271,0.23674473558521,1.37734962223183,0.771335564436891,1.86027155800326,0.804820204198858,1.05088808130453,0,1.14917224855367,2.02672023864639,2.19299981137998,3.29325172936576,1.20785776884335,5.88811855979556,2.05809224758569,0.660837565967596,1.32225283331772,2.55945900642281,1.16118335930219,1.28867461322093,0.80673409849337,1.11189021922435,0.380451252225118,0.474529061544512,0.988193728344065,0.251335208800269,1.39269530428806,2.9244613067868,1.79763881730844,1.08069024937347,1.7922714592893,0.758671603812327,1.37098215131675,1.1270773567308,1.22190796707189,0.775809948670503,1.19230893813542,1.45444035385792,1.91893192373483,2.98297582898612,3.45512058981041,1.1858105083486,0.333690211432188,0.589676985339609,0.449724224769707,0.405720242777006,0.241177159752417,0.763877555344259,0.575392274901621,1.29708181420028,0.549122826376163,2.87536413054709,0.744281895337007,0.624075346229121,1.01031551178845,0.358794827043824,0.964887042726734,2.58654466233247,0.568474235311454,0.488894929326078,0.169745085775188,1.17345124144251,0.335012514883631,1.42826184531608,1.56106918286239,1.57635144106191,0.221464689648775,0.318909537314974,1.63863314715738,1.20879487306127,2.02508682014116,0,0,2.45882136509518,3.86311444826625,7.70642831941401,5.39173758324135,0.983609672260053,1.00988370881749,1.26203287766503,1.17131623288992,0.430846795465598,0.477937595905104,0.445597348164788,1.13230612315533,0.404810701674894,0.876767573733936,1.18586333383957,3.53453448063988,3.26462195979018,2.31485284767432,2.44330439030364,3.13443233647817,2.65490276679926,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72584 | |||
|HGNC= | |||
|MCL_coexpression_id=121 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=327bp_to_ENSMUST00000147129,uc009tab.1_5end | |||
|cluster_id=chrX:35917464..35917511,- | |||
|description=CAGE_peak_5_at_Cul4b_5end | |||
|id=chrX:35917464..35917511,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.64e-08!71;UBERON:0003075!3.64e-08!71;UBERON:0007284!3.64e-08!71;UBERON:0001049!6.18e-08!52;UBERON:0005068!6.18e-08!52;UBERON:0006241!6.18e-08!52;UBERON:0007135!6.18e-08!52;UBERON:0000955!1.35e-07!50;UBERON:0006238!1.35e-07!50;UBERON:0000033!1.86e-07!63;UBERON:0002616!3.34e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.49e-09,54;UBERON:0001049,1.42e-08,52;UBERON:0005068,1.42e-08,52;UBERON:0006241,1.42e-08,52;UBERON:0007135,1.42e-08,52;UBERON:0010314,8.47e-08,92;UBERON:0002346,1.04e-07,64;UBERON:0003075,1.04e-07,64;UBERON:0007284,1.04e-07,64;UBERON:0000955,9.16e-07,47;UBERON:0006238,9.16e-07,47 | |||
|phase1_expression=0.640595388419176,0.348975407639361,0.454999239389536,0.30246421130683,0.500895729946347,0.16787927191189,0.233612640595526,3.22808308603941,0.422366166455,0.936258105287974,0.34243593645101,0.239316476986009,2.05440875917447,2.88487327982691,0,0.404950534779652,0,0.473193248037357,0.685572168028694,0,2.12608225377674,0.397163804803541,0,0.639969691173627,0.22940928106717,0.57423196411502,0.430761996159075,0,0,0.252030129759931,0.443461021310609,0,1.23012957516914,0,0,0.166234645358492,0.204169356262369,2.09265815368454,0.7813353445238,2.61761871986899,2.35292595212406,2.73218193983378,3.88408282424923,5.03587271902309,4.66333883609767,4.58866880404204,0,0.872100625521786,0.219686182734472,1.1665793944457,0.419959264876088,0,0.503347818173209,0,1.34437519656986,0.771778308107841,0.573066879877513,3.09403255366465,1.21389876515759,1.05798195854407,1.90149421051854,0.677689064138264,0,0,1.97773272513395,0,0,0.384218305321555,1.03689612308478,0.540023753326763,1.05162480675691,1.71390590642282,2.65042249141936,0.489963196859816,0.383381884072945,0,5.50579404996943,4.21368215681119,5.06901559745603,1.18697658957174,0.914876436024097,2.6045668527838,3.62937898701795,5.06486349028512,5.04234217663473,5.59794312399969,3.98640706237488,2.23679334990361,0.37863096666592,0.377857800533928,5.50742528533188,2.58127163094416,0.679971333707751,0.539703191637817,0.649776417447669,0,1.54488862144927,1.70430322578058,0.779358013808606,1.06001872353102,0.563373679106722,1.28326477414318,0,0,0,0,0,0.91347103775248,2.58937883647172,1.63286352971307,1.21439728736295,1.21786191324856,1.61430848079241,1.05505848386836,2.4693628498498,2.01066546127481,1.97755974187499,3.90418263683761,0.884610551949874,0.323533699894818,0.441683036920787,1.93950101254089,1.86391761218122,15.2246014446005,14.2423760633149,0.766371165625774,0.479260498023681,0,0.635351135365324,10.1857634795279,5.03250663100489,1.38219787324151,4.69325664519146,3.3243009452943,7.68815764870372,4.38051410282946,1.12023300235348,1.7416975885413,0.758168275301024,1.47309299120532,1.69156575851515,1.14951052216736,0.900310649026746,1.20563854268572,0.884474488967262,1.2811372028485,1.21812241927647,2.58703370739016,1.5089759505299,3.21480336285293,2.11141348996739,1.09597866213787,1.11218899690239,1.0447564995665,1.85203922767149,4.97585667046233,0.702213187313235,0.257347907114715,1.42081749697796,3.10688658803253,2.81431271977315,1.2604344302271,0.23674473558521,1.37734962223183,0.771335564436891,1.86027155800326,0.804820204198858,1.05088808130453,0,1.14917224855367,2.02672023864639,2.19299981137998,3.29325172936576,1.20785776884335,5.88811855979556,2.05809224758569,0.660837565967596,1.32225283331772,2.55945900642281,1.16118335930219,1.28867461322093,0.80673409849337,1.11189021922435,0.380451252225118,0.474529061544512,0.988193728344065,0.251335208800269,1.39269530428806,2.9244613067868,1.79763881730844,1.08069024937347,1.7922714592893,0.758671603812327,1.37098215131675,1.1270773567308,1.22190796707189,0.775809948670503,1.19230893813542,1.45444035385792,1.91893192373483,2.98297582898612,3.45512058981041,1.1858105083486,0.333690211432188,0.589676985339609,0.449724224769707,0.405720242777006,0.241177159752417,0.763877555344259,0.575392274901621,1.29708181420028,0.549122826376163,2.87536413054709,0.744281895337007,0.624075346229121,1.01031551178845,0.358794827043824,0.964887042726734,2.58654466233247,0.568474235311454,0.488894929326078,0.169745085775188,1.17345124144251,0.335012514883631,1.42826184531608,1.56106918286239,1.57635144106191,0.221464689648775,0.318909537314974,1.63863314715738,1.20879487306127,2.02508682014116,0,0,2.45882136509518,3.86311444826625,7.70642831941401,5.39173758324135,0.983609672260053,1.00988370881749,1.26203287766503,1.17131623288992,0.430846795465598,0.477937595905104,0.445597348164788,1.13230612315533,0.404810701674894,0.876767573733936,1.18586333383957,3.53453448063988,3.26462195979018,2.31485284767432,2.44330439030364,3.13443233647817,2.65490276679926,1.94224508923985,0.604647113929502,1.32023555829129,0.885905678642318,1.53717573971964,0.258428293168221,1.45413491791002,0.356497378384721,0.632073515871632,0,1.03135543248187,4.08527526904546,1.8006109403131,0.388076051348264,0.643011105094777,1.77340233642274,1.07021290561242,1.97458824722545,0.913394847343798,1.64270195644597,0.42366414172764,1.7642271844397,0.8244312647074,2.42196640043858,0.482503399425247,0.596861720015682,0.820704498725306,2.04036585640896,9.27126510052548,1.19609616558497,0.82554747185289,1.48155621895769,1.13021074202815,1.0935538217682,0.686334519619568,1.01987057996313,1.95932033253121,1.24379976423981,0,1.58167996790568,0.609958401380546,0.648032044930808,0.836353184057875,1.74690050996942,1.21377911746339,0.41326727862668,1.30877970992015,0.648074866458964,2.4853572523477,0.56369293868419,4.63501292736334,3.97100377097034,2.72231663681667,2.32487682259916,2.02747350588934,2.93393096614385,0.781226309063701,1.15345278868282,0.483168241652012,0.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| |||
|short_description=p5@Cul4b | |||
}} |
Latest revision as of 20:23, 1 October 2015
Short description: | p5@Cul4b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Cul4b_5end |
Coexpression cluster: | MCL_coexpression_mm9:121 |
Association with transcript: | 327bp_to_ENSMUST00000147129, uc009tab.1_5end |
EntrezGene: | Cul4b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.49e-09 | 54 |
neural tube | 1.42e-08 | 52 |
neural rod | 1.42e-08 | 52 |
future spinal cord | 1.42e-08 | 52 |
neural keel | 1.42e-08 | 52 |
structure with developmental contribution from neural crest | 8.47e-08 | 92 |
neurectoderm | 1.04e-07 | 64 |
neural plate | 1.04e-07 | 64 |
presumptive neural plate | 1.04e-07 | 64 |
brain | 9.16e-07 | 47 |
future brain | 9.16e-07 | 47 |