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FFCP PHASE1:Mm9::chrX:35929366..35929381,-: Difference between revisions

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{{FFCP|EntrezGene=72584|HGNC=|MCL_coexpression_id=161|UniProt=E9PXY1,A2A432,Q3TP81|association_with_transcript=0bp_to_ENSMUST00000016681,ENSMUST00000115118,NM_001110142,NM_028288,uc009taa.2,uc009tac.2_5end|description=CAGE_peak_4_at_Cul4b_5end|id=chrX:35929366..35929381,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000349,2.02e-07,3;CL:0000351,2.02e-07,3;CL:0002494,8.53e-07,3;CL:0000737,8.53e-07,3;CL:0000746,8.53e-07,3;CL:0000513,8.53e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004872!2.96e-15!33;UBERON:0007100!2.92e-14!18;UBERON:0000948!2.92e-14!18;UBERON:0005498!2.92e-14!18;UBERON:0004140!2.92e-14!18;UBERON:0009881!2.92e-14!18;UBERON:0004141!2.92e-14!18;UBERON:0003084!2.92e-14!18;UBERON:0007005!2.92e-14!18;UBERON:0004139!2.92e-14!18;UBERON:0004291!2.92e-14!18;UBERON:0000926!6.92e-11!193;UBERON:0004120!6.92e-11!193;UBERON:0006603!6.92e-11!193;UBERON:0004535!1.15e-10!23;UBERON:0001009!1.15e-10!23;UBERON:0000991!5.35e-09!18;UBERON:0005564!5.35e-09!18;UBERON:0003133!7.45e-09!24;UBERON:0003914!7.46e-09!47;UBERON:0001048!8.65e-09!147;UBERON:0000473!1.02e-08!14;UBERON:0004176!2.52e-08!17;UBERON:0009196!2.52e-08!17;UBERON:0009117!2.52e-08!17;UBERON:0003135!8.09e-08!15;UBERON:0005156!1.19e-07!26;UBERON:0000990!1.19e-07!26;UBERON:0003101!4.85e-07!16;UBERON:0000079!4.85e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0007100,5.50e-28,18;UBERON:0000948,5.50e-28,18;UBERON:0005498,5.50e-28,18;UBERON:0004140,5.50e-28,18;UBERON:0009881,5.50e-28,18;UBERON:0004141,5.50e-28,18;UBERON:0003084,5.50e-28,18;UBERON:0007005,5.50e-28,18;UBERON:0004139,5.50e-28,18;UBERON:0004291,5.50e-28,18;UBERON:0004872,3.71e-21,33;UBERON:0004535,7.26e-21,23;UBERON:0001009,7.26e-21,23;UBERON:0003914,1.75e-15,47;UBERON:0000473,2.07e-15,14;UBERON:0003135,3.37e-14,15;UBERON:0000991,1.61e-13,18;UBERON:0005564,1.61e-13,18;UBERON:0003133,1.96e-13,24;UBERON:0003101,3.87e-13,16;UBERON:0000079,3.87e-13,16;UBERON:0004176,3.32e-12,17;UBERON:0009196,3.32e-12,17;UBERON:0009117,3.32e-12,17;UBERON:0005156,4.08e-12,26;UBERON:0000990,4.08e-12,26;UBERON:0000926,1.16e-11,120;UBERON:0004120,1.16e-11,120;UBERON:0006603,1.16e-11,120;UBERON:0001048,1.45e-11,134;UBERON:0003103,4.67e-09,43;UBERON:0000358,2.02e-07,3;UBERON:0000307,2.02e-07,3;UBERON:0007010,2.02e-07,3;UBERON:0005631,3.06e-07,3;UBERON:0000478,3.06e-07,3;UBERON:0000158,3.06e-07,3;UBERON:0002323,4.78e-07,37;UBERON:0004458,4.78e-07,37;UBERON:0003886,8.92e-07,38|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.404950534779652,0.699561878128147,0,0,0,20.8356060870121,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.6388303711633,13.4670716771216,13.9231464914909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,4.11061966988616,0.258937883647172,0,0.173485326766136,0,0,0,0.587943535678524,0,23.2363269670311,0.433798070759735,1.76922110389975,0,0.883366073841574,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0.205782136407943,2.7864797354589,0,0,0,3.31401236056803,4.22146907965973,3.96136535214233,2.84093682702252,2.55793501271625,3.85667782218446,2.79040733700489,2.41446061259657,1.98501082024188,1.81015834904829,2.62667942526552,2.35099547682982,1.46199987425332,2.41505126820156,2.14730270016595,0,0,0,1.05780226665418,0.426576501070468,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,0,4.50481785433454,2.16214894624523,2.69834534861824,1.62288097110802,0.964708639009667,1.2731292589071,0.575392274901621,0.324270453550071,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0,0.234690248288502,0,0,0.390267295715598,0,0.8858587585951,0.159454768657487,0.327726629431476,0.172684981865896,0.723245292907558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.488660878060728,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,83.7777997787446,108.246188211412,0,0,0.161464426695906,0.301564624640779,0.358117032009409,0.164140899745061,0,0,0.512612642393558,0.82554747185289,0.925972636848558,0.565105371014073,2.7338845544205,1.37266903923914,0,0,0,0.954670618015114,0,0.203319467126849,0,0.209088296014469,0.436725127492355,1.34864346384821,0.495920734352016,1.30877970992015,0.129614973291793,0,78.3533184771025,5.08356256549528,3.30916980914195,5.05573089694524,2.84151611651008,4.56181538825101,4.5769323071844,15.8849349509619,31.4578033277133,26.8158374116867,63.6546313829883,0,0.810900861160657,0.205421914329655,0.25984164595559,0.179026695667481,0,0,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0,0,111.658934547155,78.7687661031197,134.643462323991,0.965947970160952,0.563047426353546,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.512200817262403,0.486213434136588,0.419226325255965,0,0.44449345560323,0.412070114477788,0,0.252697211763798,0,0.188626341386076,0.280924522409647,0.128050304809739,0.0574354689556133,0.952587382566147,0,0.38581844092741,0,0.147198920134397,0,0,0,0.290692833264657,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.271608227691724,0,0.118635018124174,0,0,0.154936841185966,0.385813221962283,0,0,0.429742108096597,0,0,0|short_description=p4@Cul4b}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=72584
|HGNC=
|MCL_coexpression_id=161
|TSSclassifier=NA
|UniProt=E9PXY1,A2A432,Q3TP81
|association_with_transcript=0bp_to_ENSMUST00000016681,ENSMUST00000115118,NM_001110142,NM_028288,uc009taa.2,uc009tac.2_5end
|cluster_id=chrX:35929366..35929381,-
|description=CAGE_peak_4_at_Cul4b_5end
|id=chrX:35929366..35929381,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000349,2.02e-07,3;CL:0000351,2.02e-07,3;CL:0002494,8.53e-07,3;CL:0000737,8.53e-07,3;CL:0000746,8.53e-07,3;CL:0000513,8.53e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004872!2.96e-15!33;UBERON:0007100!2.92e-14!18;UBERON:0000948!2.92e-14!18;UBERON:0005498!2.92e-14!18;UBERON:0004140!2.92e-14!18;UBERON:0009881!2.92e-14!18;UBERON:0004141!2.92e-14!18;UBERON:0003084!2.92e-14!18;UBERON:0007005!2.92e-14!18;UBERON:0004139!2.92e-14!18;UBERON:0004291!2.92e-14!18;UBERON:0000926!6.92e-11!193;UBERON:0004120!6.92e-11!193;UBERON:0006603!6.92e-11!193;UBERON:0004535!1.15e-10!23;UBERON:0001009!1.15e-10!23;UBERON:0000991!5.35e-09!18;UBERON:0005564!5.35e-09!18;UBERON:0003133!7.45e-09!24;UBERON:0003914!7.46e-09!47;UBERON:0001048!8.65e-09!147;UBERON:0000473!1.02e-08!14;UBERON:0004176!2.52e-08!17;UBERON:0009196!2.52e-08!17;UBERON:0009117!2.52e-08!17;UBERON:0003135!8.09e-08!15;UBERON:0005156!1.19e-07!26;UBERON:0000990!1.19e-07!26;UBERON:0003101!4.85e-07!16;UBERON:0000079!4.85e-07!16
|ontology_enrichment_uberon_v019_2=UBERON:0007100,5.50e-28,18;UBERON:0000948,5.50e-28,18;UBERON:0005498,5.50e-28,18;UBERON:0004140,5.50e-28,18;UBERON:0009881,5.50e-28,18;UBERON:0004141,5.50e-28,18;UBERON:0003084,5.50e-28,18;UBERON:0007005,5.50e-28,18;UBERON:0004139,5.50e-28,18;UBERON:0004291,5.50e-28,18;UBERON:0004872,3.71e-21,33;UBERON:0004535,7.26e-21,23;UBERON:0001009,7.26e-21,23;UBERON:0003914,1.75e-15,47;UBERON:0000473,2.07e-15,14;UBERON:0003135,3.37e-14,15;UBERON:0000991,1.61e-13,18;UBERON:0005564,1.61e-13,18;UBERON:0003133,1.96e-13,24;UBERON:0003101,3.87e-13,16;UBERON:0000079,3.87e-13,16;UBERON:0004176,3.32e-12,17;UBERON:0009196,3.32e-12,17;UBERON:0009117,3.32e-12,17;UBERON:0005156,4.08e-12,26;UBERON:0000990,4.08e-12,26;UBERON:0000926,1.16e-11,120;UBERON:0004120,1.16e-11,120;UBERON:0006603,1.16e-11,120;UBERON:0001048,1.45e-11,134;UBERON:0003103,4.67e-09,43;UBERON:0000358,2.02e-07,3;UBERON:0000307,2.02e-07,3;UBERON:0007010,2.02e-07,3;UBERON:0005631,3.06e-07,3;UBERON:0000478,3.06e-07,3;UBERON:0000158,3.06e-07,3;UBERON:0002323,4.78e-07,37;UBERON:0004458,4.78e-07,37;UBERON:0003886,8.92e-07,38
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.404950534779652,0.699561878128147,0,0,0,20.8356060870121,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.6388303711633,13.4670716771216,13.9231464914909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,4.11061966988616,0.258937883647172,0,0.173485326766136,0,0,0,0.587943535678524,0,23.2363269670311,0.433798070759735,1.76922110389975,0,0.883366073841574,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0.205782136407943,2.7864797354589,0,0,0,3.31401236056803,4.22146907965973,3.96136535214233,2.84093682702252,2.55793501271625,3.85667782218446,2.79040733700489,2.41446061259657,1.98501082024188,1.81015834904829,2.62667942526552,2.35099547682982,1.46199987425332,2.41505126820156,2.14730270016595,0,0,0,1.05780226665418,0.426576501070468,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,0,4.50481785433454,2.16214894624523,2.69834534861824,1.62288097110802,0.964708639009667,1.2731292589071,0.575392274901621,0.324270453550071,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0,0.234690248288502,0,0,0.390267295715598,0,0.8858587585951,0.159454768657487,0.327726629431476,0.172684981865896,0.723245292907558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.488660878060728,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,83.7777997787446,108.246188211412,0,0,0.161464426695906,0.301564624640779,0.358117032009409,0.164140899745061,0,0,0.512612642393558,0.82554747185289,0.925972636848558,0.565105371014073,2.7338845544205,1.37266903923914,0,0,0,0.954670618015114,0,0.203319467126849,0,0.209088296014469,0.436725127492355,1.34864346384821,0.495920734352016,1.30877970992015,0.129614973291793,0,78.3533184771025,5.08356256549528,3.30916980914195,5.05573089694524,2.84151611651008,4.56181538825101,4.5769323071844,15.8849349509619,31.4578033277133,26.8158374116867,63.6546313829883,0,0.810900861160657,0.205421914329655,0.25984164595559,0.179026695667481,0,0,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0,0,111.658934547155,78.7687661031197,134.643462323991,0.965947970160952,0.563047426353546,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.512200817262403,0.486213434136588,0.419226325255965,0,0.44449345560323,0.412070114477788,0,0.252697211763798,0,0.188626341386076,0.280924522409647,0.128050304809739,0.0574354689556133,0.952587382566147,0,0.38581844092741,0,0.147198920134397,0,0,0,0.290692833264657,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.271608227691724,0,0.118635018124174,0,0,0.154936841185966,0.385813221962283,0,0,0.429742108096597,0,0,0
|short_description=p4@Cul4b
}}

Latest revision as of 20:27, 1 October 2015

Short description:p4@Cul4b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Cul4b_5end
Coexpression cluster:MCL_coexpression_mm9:161
Association with transcript: 0bp_to_ENSMUST00000016681, ENSMUST00000115118, NM_001110142, NM_028288, uc009taa.2, uc009tac.2_5end
EntrezGene:Cul4b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Cul4b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A320.84
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C122.64
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E113.47
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C513.92
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A823.24
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E93.31
heart, embryo E12.CNhs11015.353-12F54.22
heart, embryo E13.CNhs11013.376-3I93.96
heart, embryo E14.CNhs10597.403-26D42.84
heart, embryo E15.CNhs11017.431-16C82.56
heart, embryo E16.CNhs11021.457-17C63.86
heart, embryo E17.CNhs11025.479-18E52.79
heart, embryo E18.CNhs11030.1283-20G32.41
heart, neonate N00.CNhs11213.639-21E31.99
heart, neonate N03.CNhs11221.1349-25I21.81
heart, neonate N10.CNhs11118.749-24G12.63
heart, neonate N16.CNhs11209.782-15G12.35
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D32.42
heart, neonate N30.CNhs11202.1390-42D22.15
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F84.50
liver, embryo E13.CNhs10524.378-3H62.16
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I783.78
placenta, adult pregnant day17.CNhs10464.577-18G3108.25
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H12.73
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G578.35
testis, embryo E13.CNhs11031.389-23F55.08
testis, embryo E15.CNhs11034.443-27C53.31
testis, embryo E16.CNhs11033.470-26G55.06
testis, embryo E17.CNhs11029.486-18I52.84
testis, embryo E18.CNhs11027.503-18G54.56
testis, neonate N00.CNhs11189.1300-22B74.58
testis, neonate N07.CNhs11222.726-26I415.88
testis, neonate N10.CNhs11204.763-44D931.46
testis, neonate N20.CNhs11110.839-18H326.82
testis, neonate N30.CNhs11130.1391-42E263.65
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3111.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F778.77
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5134.64
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
extraembryonic cell2.02e-073
trophoblast cell2.02e-073
cardiocyte8.53e-073
striated muscle cell8.53e-073
cardiac muscle cell8.53e-073
cardiac muscle myoblast8.53e-073

Uber anatomy
Ontology termp-valuen
primary circulatory organ5.50e-2818
heart5.50e-2818
primitive heart tube5.50e-2818
primary heart field5.50e-2818
anterior lateral plate mesoderm5.50e-2818
heart tube5.50e-2818
heart primordium5.50e-2818
cardiac mesoderm5.50e-2818
cardiogenic plate5.50e-2818
heart rudiment5.50e-2818
splanchnic layer of lateral plate mesoderm3.71e-2133
cardiovascular system7.26e-2123
circulatory system7.26e-2123
epithelial tube1.75e-1547
testis2.07e-1514
male reproductive organ3.37e-1415
gonad1.61e-1318
gonad primordium1.61e-1318
reproductive organ1.96e-1324
male organism3.87e-1316
male reproductive system3.87e-1316
external genitalia3.32e-1217
indifferent external genitalia3.32e-1217
indifferent gonad3.32e-1217
reproductive structure4.08e-1226
reproductive system4.08e-1226
mesoderm1.16e-11120
mesoderm-derived structure1.16e-11120
presumptive mesoderm1.16e-11120
primordium1.45e-11134
compound organ4.67e-0943
blastocyst2.02e-073
blastula2.02e-073
cleaving embryo2.02e-073
extraembryonic membrane3.06e-073
extraembryonic structure3.06e-073
membranous layer3.06e-073
body cavity4.78e-0737
body cavity or lining4.78e-0737
body cavity precursor8.92e-0738
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