Personal tools

FFCP PHASE1:Mm9::chr19:10315252..10315266,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=225908
|EntrezGene=225908
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=F8WJJ9,Q3UR85,B2RXQ7
|UniProt=F8WJJ9,Q3UR85,B2RXQ7
|association_with_transcript=-14bp_to_ENSMUST00000088013,ENSMUST00000096230,NM_001033481,uc008gpl.1,uc012bil.1,uc012bim.1_5end
|association_with_transcript=-14bp_to_ENSMUST00000088013,ENSMUST00000096230,NM_001033481,uc008gpl.1,uc012bil.1,uc012bim.1_5end
|cluster_id=chr19:10315252..10315266,-
|description=CAGE_peak_2_at_Gm98_5end
|description=CAGE_peak_2_at_Gm98_5end
|id=chr19:10315252..10315266,-
|id=chr19:10315252..10315266,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002563,1.14e-08,9;CL:0002251,1.14e-08,9;CL:0000239,4.83e-07,6;CL:0000677,4.83e-07,6;CL:0000584,4.83e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!4.72e-14!43;UBERON:0005409!4.90e-13!59;UBERON:0001007!8.63e-08!128;UBERON:0001555!8.63e-08!128;UBERON:0007026!8.63e-08!128;UBERON:0000344!1.03e-07!15;UBERON:0000466!1.90e-07!79;UBERON:0004119!2.11e-07!130;UBERON:0000925!2.11e-07!130;UBERON:0006595!2.11e-07!130;UBERON:0004921!2.76e-07!126;UBERON:0004185!2.76e-07!126;UBERON:0001242!3.93e-07!13;UBERON:0000060!3.93e-07!13;UBERON:0001262!3.93e-07!13;UBERON:0004786!3.93e-07!13
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.22e-12,31;UBERON:0005409,4.53e-11,47;UBERON:0001007,3.00e-09,116;UBERON:0001555,3.00e-09,116;UBERON:0007026,3.00e-09,116;UBERON:0000344,4.16e-09,15;UBERON:0004119,8.05e-09,118;UBERON:0000925,8.05e-09,118;UBERON:0006595,8.05e-09,118;UBERON:0003350,1.14e-08,9;UBERON:0004808,1.14e-08,9;UBERON:0001277,1.14e-08,9;UBERON:0004921,1.49e-08,114;UBERON:0001242,3.24e-08,13;UBERON:0001262,3.24e-08,13;UBERON:0004786,3.24e-08,13;UBERON:0002107,6.68e-07,22;UBERON:0007499,6.68e-07,22;UBERON:0006925,6.68e-07,22;UBERON:0009497,6.68e-07,22;UBERON:0000015,6.68e-07,22;UBERON:0002423,6.68e-07,22;UBERON:0006235,6.68e-07,22;UBERON:0008835,6.68e-07,22;UBERON:0003894,6.68e-07,22;UBERON:0004161,6.68e-07,22;UBERON:0008836,6.68e-07,22
|phase1_expression=0,2.44282785347553,5.0049916332849,4.23449895829562,2.50447864973174,3.18970616632591,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0.794327609607082,0,1.27993938234725,2.06468352960453,3.44539178469012,2.15380998079537,2.80112602491656,0.760093677825496,0.756090389279792,2.21730510655305,0.635030673459631,0.61506478758457,0,2.02196133825892,1.99481574430191,1.63335485009895,0,0,0,0,0,0,1.00717454380462,1.82478476195126,2.38610777810186,2.34717403304412,0.218025156380447,0.219686182734472,0,0.279972843250725,0,0,0,0,1.02903774414379,1.43266719969378,0.515672092277442,0,0,0,1.35537812827653,1.77858959222228,0,1.97773272513395,1.4209602298922,0.898800331555214,1.92109152660777,0,0,0.210324961351382,0.856952953211411,1.76694832761291,0,0,0,3.30347642998166,1.40456071893706,2.15049146558741,0.395658863190582,0.0914876436024097,0,1.3959149950069,1.12552522006336,1.68078072554491,0.883885756421003,0.569486723196412,0.186399445825301,0.075726193333184,0.226714680320357,2.6087803983151,2.58127163094416,0,2.69851595818909,1.29955283489534,1.34408066129201,1.26399978118577,0,0,0,0.14084341977668,0,0,0,0,0,0,0.91347103775248,0,0,0.520455980298408,0,0.691846491768175,0.301445281105245,0.705532242814229,0.125666591329675,0.741584903203122,1.3013942122792,0,0,0,0,0,1.46390398505774,1.04723353406728,2.04365644166873,0,0,0,0.299581278809645,0.915001205637253,0.376963056338593,0.695297280769106,1.02286182932132,1.45451631191692,1.94689515681309,2.64782346010822,0,0,0,0.910843100738926,0.229902104433473,0.720248519221397,0,0,0.12811372028485,0.0937017245597288,0.517406741478031,1.07783996466421,1.70195472151037,0.351902248327898,0,0,0,0,1.39323986772945,0,0,0,2.89976081549703,0.469052119962192,0.900310307305074,0.946978942340841,0,0.308534225774757,0.697601834251224,0,0.350296027101508,0.16455984991348,0.32833492815819,0.0810688095458557,0.292399974850665,0.878200461164203,0.134206418760372,1.05144974282064,0.102904612379284,3.96502539580558,1.32225283331772,2.13288250535234,2.78684006232526,2.83508414908605,2.42020229548011,2.44615848229357,0.951128130562796,1.42358718463353,0.658795818896044,1.50801125280162,1.39269530428806,1.16978452271472,1.79763881730844,1.51296634912286,0.995706366271836,0.189667900953082,0.456994050438915,2.25415471346161,0.203651327845314,0.581857461502877,0.561086559122548,0.569128834118316,0.738050739898011,0.470996183524124,0.493588655687202,1.48226313543574,1.33476084572875,2.35870794135844,1.34917267430912,2.02860121388503,2.41177159752417,0.50925170356284,1.43848068725405,1.62135226775035,0.823684239564244,0,0.744281895337007,1.87222603868736,1.51547326768267,1.25578189465339,1.92977408545347,0.739012760666419,2.08440552947533,2.28150967018836,1.01847051465113,0.938760993154008,0.837531287209079,2.38043640886014,0.585400943573396,1.41871629695572,0.44292937929755,1.59454768657487,0.327726629431476,0.863424909329478,0.723245292907558,0,0,0,0,1.28440471990234,2.81308047821288,0,0.252470927204373,0.315508219416257,0,0.430846795465598,0.955875191810208,0.668396022247182,0.849229592366497,0,0.584511715822624,0.395287777946524,0.321321316421807,0.425820255624806,2.67098405500883,2.44330439030364,0.989820737835213,0,4.85561272309963,3.02323556964751,1.88605079755898,3.54362271456927,1.84461088766356,2.06742634534577,1.45413491791002,1.78248689192361,2.84433082142234,0,2.06271086496374,0,1.08036656418786,0.517434735131018,0.643011105094777,0.177340233642274,0.356737635204141,0.164549020602121,0,0,0.42366414172764,0,0.16488625294148,0,0.120625849856312,0,0.328281799490123,0.582961673259701,3.52308073819968,0,1.03193433981611,0.370389054739423,0.188368457004691,0,0,0,0,0,1.90934123603023,5.06137589729817,1.01659733563424,2.16010681643603,1.46361807210128,1.31017538247707,0.809186078308924,0.991841468704031,1.30877970992015,0,0,0.56369293868419,2.8408143748356,1.32366792365678,0.972255941720238,0.645799117388655,0.844780627453891,0.234714477291508,0.911430693907651,1.46803082195995,0.724752362478018,0,0,0.608175645870493,0.102710957164827,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0,1.33191572024439,0.448569283047378,0.503653849092235,1.35232715822533,0.750729901804728,0.549454872801795,0,0,1.6942555278512,0.920650473014354,0,0.515559547031063,0.685082519770642,0.755393897389701,0.675022500231806,0.900642406448441,0.453142408984205,0.51776031175182,0.207574695168353,0.798049746802062,0.682934423016537,0.972426868273176,0.419226325255965,0.183843508450014,0.222246727801615,0.412070114477788,0.320919209591815,0,0,0.188626341386076,0.280924522409647,0.576226371643824,0.459483751644906,0.476293691283074,0.115884325944855,0.578727661391115,0.824171801606613,0.735994600671987,0.342869252385415,0.177475806159338,0,0.726732083161643,0.564656282491984,0.169229215783353,0.914639864363863,0.263069711437843,0.543216455383447,0,0.237270036248348,0,0.818462086339379,0.619747364743864,0.192906610981141,0.249810577937946,0.467863216890817,0.644613162144895,0,0.441182838239031,0.463735671240843
|phase1_expression=0,2.44282785347553,5.0049916332849,4.23449895829562,2.50447864973174,3.18970616632591,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0.794327609607082,0,1.27993938234725,2.06468352960453,3.44539178469012,2.15380998079537,2.80112602491656,0.760093677825496,0.756090389279792,2.21730510655305,0.635030673459631,0.61506478758457,0,2.02196133825892,1.99481574430191,1.63335485009895,0,0,0,0,0,0,1.00717454380462,1.82478476195126,2.38610777810186,2.34717403304412,0.218025156380447,0.219686182734472,0,0.279972843250725,0,0,0,0,1.02903774414379,1.43266719969378,0.515672092277442,0,0,0,1.35537812827653,1.77858959222228,0,1.97773272513395,1.4209602298922,0.898800331555214,1.92109152660777,0,0,0.210324961351382,0.856952953211411,1.76694832761291,0,0,0,3.30347642998166,1.40456071893706,2.15049146558741,0.395658863190582,0.0914876436024097,0,1.3959149950069,1.12552522006336,1.68078072554491,0.883885756421003,0.569486723196412,0.186399445825301,0.075726193333184,0.226714680320357,2.6087803983151,2.58127163094416,0,2.69851595818909,1.29955283489534,1.34408066129201,1.26399978118577,0,0,0,0.14084341977668,0,0,0,0,0,0,0.91347103775248,0,0,0.520455980298408,0,0.691846491768175,0.301445281105245,0.705532242814229,0.125666591329675,0.741584903203122,1.3013942122792,0,0,0,0,0,1.46390398505774,1.04723353406728,2.04365644166873,0,0,0,0.299581278809645,0.915001205637253,0.376963056338593,0.695297280769106,1.02286182932132,1.45451631191692,1.94689515681309,2.64782346010822,0,0,0,0.910843100738926,0.229902104433473,0.720248519221397,0,0,0.12811372028485,0.0937017245597288,0.517406741478031,1.07783996466421,1.70195472151037,0.351902248327898,0,0,0,0,1.39323986772945,0,0,0,2.89976081549703,0.469052119962192,0.900310307305074,0.946978942340841,0,0.308534225774757,0.697601834251224,0,0.350296027101508,0.16455984991348,0.32833492815819,0.0810688095458557,0.292399974850665,0.878200461164203,0.134206418760372,1.05144974282064,0.102904612379284,3.96502539580558,1.32225283331772,2.13288250535234,2.78684006232526,2.83508414908605,2.42020229548011,2.44615848229357,0.951128130562796,1.42358718463353,0.658795818896044,1.50801125280162,1.39269530428806,1.16978452271472,1.79763881730844,1.51296634912286,0.995706366271836,0.189667900953082,0.456994050438915,2.25415471346161,0.203651327845314,0.581857461502877,0.561086559122548,0.569128834118316,0.738050739898011,0.470996183524124,0.493588655687202,1.48226313543574,1.33476084572875,2.35870794135844,1.34917267430912,2.02860121388503,2.41177159752417,0.50925170356284,1.43848068725405,1.62135226775035,0.823684239564244,0,0.744281895337007,1.87222603868736,1.51547326768267,1.25578189465339,1.92977408545347,0.739012760666419,2.08440552947533,2.28150967018836,1.01847051465113,0.938760993154008,0.837531287209079,2.38043640886014,0.585400943573396,1.41871629695572,0.44292937929755,1.59454768657487,0.327726629431476,0.863424909329478,0.723245292907558,0,0,0,0,1.28440471990234,2.81308047821288,0,0.252470927204373,0.315508219416257,0,0.430846795465598,0.955875191810208,0.668396022247182,0.849229592366497,0,0.584511715822624,0.395287777946524,0.321321316421807,0.425820255624806,2.67098405500883,2.44330439030364,0.989820737835213,0,4.85561272309963,3.02323556964751,1.88605079755898,3.54362271456927,1.84461088766356,2.06742634534577,1.45413491791002,1.78248689192361,2.84433082142234,0,2.06271086496374,0,1.08036656418786,0.517434735131018,0.643011105094777,0.177340233642274,0.356737635204141,0.164549020602121,0,0,0.42366414172764,0,0.16488625294148,0,0.120625849856312,0,0.328281799490123,0.582961673259701,3.52308073819968,0,1.03193433981611,0.370389054739423,0.188368457004691,0,0,0,0,0,1.90934123603023,5.06137589729817,1.01659733563424,2.16010681643603,1.46361807210128,1.31017538247707,0.809186078308924,0.991841468704031,1.30877970992015,0,0,0.56369293868419,2.8408143748356,1.32366792365678,0.972255941720238,0.645799117388655,0.844780627453891,0.234714477291508,0.911430693907651,1.46803082195995,0.724752362478018,0,0,0.608175645870493,0.102710957164827,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0,1.33191572024439,0.448569283047378,0.503653849092235,1.35232715822533,0.750729901804728,0.549454872801795,0,0,1.6942555278512,0.920650473014354,0,0.515559547031063,0.685082519770642,0.755393897389701,0.675022500231806,0.900642406448441,0.453142408984205,0.51776031175182,0.207574695168353,0.798049746802062,0.682934423016537,0.972426868273176,0.419226325255965,0.183843508450014,0.222246727801615,0.412070114477788,0.320919209591815,0,0,0.188626341386076,0.280924522409647,0.576226371643824,0.459483751644906,0.476293691283074,0.115884325944855,0.578727661391115,0.824171801606613,0.735994600671987,0.342869252385415,0.177475806159338,0,0.726732083161643,0.564656282491984,0.169229215783353,0.914639864363863,0.263069711437843,0.543216455383447,0,0.237270036248348,0,0.818462086339379,0.619747364743864,0.192906610981141,0.249810577937946,0.467863216890817,0.644613162144895,0,0.441182838239031,0.463735671240843
|short_description=p2@Gm98
|short_description=p2@Gm98
}}
}}

Latest revision as of 20:29, 1 October 2015

Short description:p2@Gm98
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Gm98_5end
Coexpression cluster:NA
Association with transcript: -14bp_to_ENSMUST00000088013, ENSMUST00000096230, NM_001033481, uc008gpl.1, uc012bil.1, uc012bim.1_5end
EntrezGene:Gm98
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Gm98

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.23
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.19
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.57
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.06
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I22.80
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.82
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.39
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.40
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H72.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.65
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.90
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I33.97
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D82.84
intestine, embryo E16.CNhs10585.463-22H42.42
intestine, embryo E17.CNhs10582.482-18D32.45
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H62.36
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D72.03
liver, embryo E16.CNhs10523.462-17F52.41
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F41.62
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H11.26
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F82.28
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E51.42
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A32.81
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H72.67
ovary, neonate N00.CNhs11217.1299-22I42.44
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F44.86
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E51.89
pancreas, embryo E17.CNhs10599.1558-45G33.54
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C93.52
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E35.06
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D42.16
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F52.84
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D91.47
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
intestinal epithelial cell1.14e-089
epithelial cell of alimentary canal1.14e-089
brush border epithelial cell4.83e-076
gut absorptive cell4.83e-076
enterocyte4.83e-076

Uber anatomy
Ontology termp-valuen
intestine9.22e-1231
gastrointestinal system4.53e-1147
digestive system3.00e-09116
digestive tract3.00e-09116
primitive gut3.00e-09116
mucosa4.16e-0915
endoderm-derived structure8.05e-09118
endoderm8.05e-09118
presumptive endoderm8.05e-09118
epithelium of mucosa1.14e-089
gastrointestinal system epithelium1.14e-089
intestinal epithelium1.14e-089
subdivision of digestive tract1.49e-08114
intestinal mucosa3.24e-0813
wall of intestine3.24e-0813
gastrointestinal system mucosa3.24e-0813
liver6.68e-0722
epithelial sac6.68e-0722
digestive gland6.68e-0722
epithelium of foregut-midgut junction6.68e-0722
anatomical boundary6.68e-0722
hepatobiliary system6.68e-0722
foregut-midgut junction6.68e-0722
hepatic diverticulum6.68e-0722
liver primordium6.68e-0722
septum transversum6.68e-0722
liver bud6.68e-0722
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr19:10315252..10315266,-&oldid=4320870"