FFCP PHASE1:Mm9::chr5:123439095..123439120,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=30841 | |EntrezGene=30841 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q6P1G2,D3YUE3 | |UniProt=Q6P1G2,D3YUE3 | ||
|association_with_transcript=0bp_to_ENSMUST00000046073,ENSMUST00000123479,ENSMUST00000134501,NM_001003953,uc008zms.1,uc008zmu.1,uc008zmv.1_5end | |association_with_transcript=0bp_to_ENSMUST00000046073,ENSMUST00000123479,ENSMUST00000134501,NM_001003953,uc008zms.1,uc008zmu.1,uc008zmv.1_5end | ||
|cluster_id=chr5:123439095..123439120,- | |||
|description=CAGE_peak_2_at_Kdm2b_5end | |description=CAGE_peak_2_at_Kdm2b_5end | ||
|id=chr5:123439095..123439120,- | |id=chr5:123439095..123439120,- | ||
|ontology_enrichment_celltype=CL:0000988!9.84e-10!32;CL:0002032!9.84e-10!32;CL:0000037!9.84e-10!32;CL:0000566!9.84e-10!32;CL:0000837!9.84e-10!32;CL:0000542!3.32e-09!13;CL:0000051!3.32e-09!13;CL:0000838!7.08e-09!12;CL:0002031!1.82e-08!25;CL:0000084!3.16e-08!11;CL:0000827!3.16e-08!11;CL:0000738!1.53e-07!17;CL:0002087!1.53e-07!17;CL:0000791!3.87e-07!9;CL:0000789!3.87e-07!9;CL:0002420!3.87e-07!9;CL:0002419!3.87e-07!9;CL:0000790!3.87e-07!9 | |ontology_enrichment_celltype=CL:0000988!9.84e-10!32;CL:0002032!9.84e-10!32;CL:0000037!9.84e-10!32;CL:0000566!9.84e-10!32;CL:0000837!9.84e-10!32;CL:0000542!3.32e-09!13;CL:0000051!3.32e-09!13;CL:0000838!7.08e-09!12;CL:0002031!1.82e-08!25;CL:0000084!3.16e-08!11;CL:0000827!3.16e-08!11;CL:0000738!1.53e-07!17;CL:0002087!1.53e-07!17;CL:0000791!3.87e-07!9;CL:0000789!3.87e-07!9;CL:0002420!3.87e-07!9;CL:0002419!3.87e-07!9;CL:0000790!3.87e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,8.88e-10,32;CL:0002032,8.88e-10,32;CL:0000037,8.88e-10,32;CL:0000837,8.88e-10,32;CL:0000542,2.75e-09,13;CL:0000051,2.75e-09,13;CL:0000838,5.93e-09,12;CL:0002031,1.70e-08,25;CL:0000084,2.68e-08,11;CL:0000827,2.68e-08,11;CL:0000738,8.91e-08,17;CL:0002087,8.91e-08,17;CL:0000791,3.37e-07,9;CL:0000789,3.37e-07,9;CL:0002420,3.37e-07,9;CL:0002419,3.37e-07,9;CL:0000790,3.37e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!2.94e-10!23;UBERON:0000974!2.94e-10!23;UBERON:0004807!2.94e-10!23;UBERON:0005058!2.94e-10!23;UBERON:0003351!2.94e-10!23;UBERON:0009113!2.94e-10!23;UBERON:0003295!2.94e-10!23;UBERON:0009722!2.94e-10!23;UBERON:0005562!2.94e-10!23;UBERON:0007690!2.94e-10!23;UBERON:0003408!6.63e-10!24;UBERON:0006562!7.28e-10!24;UBERON:0001557!7.28e-10!24;UBERON:0001042!7.28e-10!24;UBERON:0008814!7.28e-10!24;UBERON:0009145!7.28e-10!24;UBERON:0004177!2.67e-09!29;UBERON:0000065!2.89e-08!41;UBERON:0001004!4.10e-08!42;UBERON:0000072!9.78e-08!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007811,7.03e-11,36;UBERON:0000153,7.39e-11,43;UBERON:0002370,2.37e-10,23;UBERON:0000974,2.37e-10,23;UBERON:0004807,2.37e-10,23;UBERON:0005058,2.37e-10,23;UBERON:0003351,2.37e-10,23;UBERON:0009113,2.37e-10,23;UBERON:0003295,2.37e-10,23;UBERON:0009722,2.37e-10,23;UBERON:0005562,2.37e-10,23;UBERON:0007690,2.37e-10,23;UBERON:0003408,5.41e-10,24;UBERON:0006562,5.94e-10,24;UBERON:0001557,5.94e-10,24;UBERON:0001042,5.94e-10,24;UBERON:0008814,5.94e-10,24;UBERON:0009145,5.94e-10,24;UBERON:0004177,2.21e-09,29;UBERON:0005057,2.21e-09,29;UBERON:0000077,2.52e-08,35;UBERON:0000065,2.93e-08,41;UBERON:0001004,4.16e-08,42;UBERON:0000072,1.03e-07,27 | |||
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| ||
|short_description=p2@Kdm2b | |short_description=p2@Kdm2b | ||
}} | }} |
Latest revision as of 20:33, 1 October 2015
Short description: | p2@Kdm2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Kdm2b_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000046073, ENSMUST00000123479, ENSMUST00000134501, NM_001003953, uc008zms.1, uc008zmu.1, uc008zmv.1_5end |
EntrezGene: | Kdm2b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 8.88e-10 | 32 |
hematopoietic oligopotent progenitor cell | 8.88e-10 | 32 |
hematopoietic stem cell | 8.88e-10 | 32 |
hematopoietic multipotent progenitor cell | 8.88e-10 | 32 |
lymphocyte | 2.75e-09 | 13 |
common lymphoid progenitor | 2.75e-09 | 13 |
lymphoid lineage restricted progenitor cell | 5.93e-09 | 12 |
hematopoietic lineage restricted progenitor cell | 1.70e-08 | 25 |
T cell | 2.68e-08 | 11 |
pro-T cell | 2.68e-08 | 11 |
leukocyte | 8.91e-08 | 17 |
nongranular leukocyte | 8.91e-08 | 17 |
mature alpha-beta T cell | 3.37e-07 | 9 |
alpha-beta T cell | 3.37e-07 | 9 |
immature T cell | 3.37e-07 | 9 |
mature T cell | 3.37e-07 | 9 |
immature alpha-beta T cell | 3.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
craniocervical region | 7.03e-11 | 36 |
anterior region of body | 7.39e-11 | 43 |
thymus | 2.37e-10 | 23 |
neck | 2.37e-10 | 23 |
respiratory system epithelium | 2.37e-10 | 23 |
hemolymphoid system gland | 2.37e-10 | 23 |
pharyngeal epithelium | 2.37e-10 | 23 |
thymic region | 2.37e-10 | 23 |
pharyngeal gland | 2.37e-10 | 23 |
entire pharyngeal arch endoderm | 2.37e-10 | 23 |
thymus primordium | 2.37e-10 | 23 |
early pharyngeal endoderm | 2.37e-10 | 23 |
gland of gut | 5.41e-10 | 24 |
pharynx | 5.94e-10 | 24 |
upper respiratory tract | 5.94e-10 | 24 |
chordate pharynx | 5.94e-10 | 24 |
pharyngeal arch system | 5.94e-10 | 24 |
pharyngeal region of foregut | 5.94e-10 | 24 |
hemopoietic organ | 2.21e-09 | 29 |
immune organ | 2.21e-09 | 29 |
mixed endoderm/mesoderm-derived structure | 2.52e-08 | 35 |
respiratory tract | 2.93e-08 | 41 |
respiratory system | 4.16e-08 | 42 |
segment of respiratory tract | 1.03e-07 | 27 |