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FFCP PHASE1:Mm9::chr6:87761646..87761661,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=69834
|EntrezGene=69834
|HGNC=
|HGNC=
|MCL_coexpression_id=175
|MCL_coexpression_id=175
|TSSclassifier=NA
|UniProt=D3Z444,Q8CG50,Q0PD10
|UniProt=D3Z444,Q8CG50,Q0PD10
|association_with_transcript=111bp_to_ENSMUST00000032135,ENSMUST00000078647,NM_001039394,uc009ctx.1,uc009cua.1_5end
|association_with_transcript=111bp_to_ENSMUST00000032135,ENSMUST00000078647,NM_001039394,uc009ctx.1,uc009cua.1_5end
|cluster_id=chr6:87761646..87761661,-
|description=CAGE_peak_4_at_Rab43_5end
|description=CAGE_peak_4_at_Rab43_5end
|id=chr6:87761646..87761661,-
|id=chr6:87761646..87761661,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000182,5.21e-07,5
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001007!1.49e-14!128;UBERON:0001555!1.49e-14!128;UBERON:0007026!1.49e-14!128;UBERON:0004119!1.86e-14!130;UBERON:0000925!1.86e-14!130;UBERON:0006595!1.86e-14!130;UBERON:0005409!6.29e-14!59;UBERON:0004921!1.16e-13!126;UBERON:0004185!1.16e-13!126;UBERON:0009854!1.19e-13!23;UBERON:0009856!1.19e-13!23;UBERON:0002107!4.35e-13!22;UBERON:0007499!4.35e-13!22;UBERON:0006925!4.35e-13!22;UBERON:0009497!4.35e-13!22;UBERON:0000015!4.35e-13!22;UBERON:0002423!4.35e-13!22;UBERON:0006235!4.35e-13!22;UBERON:0008835!4.35e-13!22;UBERON:0003894!4.35e-13!22;UBERON:0004161!4.35e-13!22;UBERON:0008836!4.35e-13!22;UBERON:0000160!8.44e-13!43;UBERON:0002365!4.28e-10!25;UBERON:0002330!4.28e-10!25;UBERON:0005172!3.49e-09!49;UBERON:0005173!3.49e-09!49;UBERON:0002417!3.49e-09!49;UBERON:0000916!3.49e-09!49;UBERON:0000466!8.15e-08!79;UBERON:0005177!1.03e-07!85;UBERON:0002100!2.41e-07!98;UBERON:0005256!3.14e-07!47
|ontology_enrichment_uberon=UBERON:0001007!1.49e-14!128;UBERON:0001555!1.49e-14!128;UBERON:0007026!1.49e-14!128;UBERON:0004119!1.86e-14!130;UBERON:0000925!1.86e-14!130;UBERON:0006595!1.86e-14!130;UBERON:0005409!6.29e-14!59;UBERON:0004921!1.16e-13!126;UBERON:0004185!1.16e-13!126;UBERON:0009854!1.19e-13!23;UBERON:0009856!1.19e-13!23;UBERON:0002107!4.35e-13!22;UBERON:0007499!4.35e-13!22;UBERON:0006925!4.35e-13!22;UBERON:0009497!4.35e-13!22;UBERON:0000015!4.35e-13!22;UBERON:0002423!4.35e-13!22;UBERON:0006235!4.35e-13!22;UBERON:0008835!4.35e-13!22;UBERON:0003894!4.35e-13!22;UBERON:0004161!4.35e-13!22;UBERON:0008836!4.35e-13!22;UBERON:0000160!8.44e-13!43;UBERON:0002365!4.28e-10!25;UBERON:0002330!4.28e-10!25;UBERON:0005172!3.49e-09!49;UBERON:0005173!3.49e-09!49;UBERON:0002417!3.49e-09!49;UBERON:0000916!3.49e-09!49;UBERON:0000466!8.15e-08!79;UBERON:0005177!1.03e-07!85;UBERON:0002100!2.41e-07!98;UBERON:0005256!3.14e-07!47
|ontology_enrichment_uberon_v019_2=UBERON:0009854,2.77e-21,23;UBERON:0009856,2.77e-21,23;UBERON:0002107,6.03e-20,22;UBERON:0007499,6.03e-20,22;UBERON:0006925,6.03e-20,22;UBERON:0009497,6.03e-20,22;UBERON:0000015,6.03e-20,22;UBERON:0002423,6.03e-20,22;UBERON:0006235,6.03e-20,22;UBERON:0008835,6.03e-20,22;UBERON:0003894,6.03e-20,22;UBERON:0004161,6.03e-20,22;UBERON:0008836,6.03e-20,22;UBERON:0002365,5.23e-17,25;UBERON:0002330,5.23e-17,25;UBERON:0000160,1.48e-15,31;UBERON:0001007,3.52e-14,116;UBERON:0001555,3.52e-14,116;UBERON:0007026,3.52e-14,116;UBERON:0004119,8.89e-14,118;UBERON:0000925,8.89e-14,118;UBERON:0006595,8.89e-14,118;UBERON:0004921,1.56e-13,114;UBERON:0005409,4.35e-11,47;UBERON:0005172,1.38e-09,49;UBERON:0005173,1.38e-09,49;UBERON:0002417,1.38e-09,49;UBERON:0000916,1.38e-09,49;UBERON:0003929,2.01e-09,55;UBERON:0005256,1.28e-08,45;UBERON:0003914,4.63e-07,47;UBERON:0000490,5.30e-07,66;UBERON:0005177,7.66e-07,79;UBERON:0003104,9.16e-07,61;UBERON:0009142,9.16e-07,61
|phase1_expression=0.160148847104794,2.44282785347553,1.81999695755814,7.86406949397758,8.01433167914156,0.33575854382378,0.700837921786577,0.258246646883153,0,0,0,0,0.171200729931206,0.0874204024189974,0.666219523631325,0.404950534779652,0,0.315462165358238,0.274228867211478,0,0.680346321208558,0.0992909512008853,0,2.71987118748791,0.68822784320151,1.72269589234506,2.15380998079537,0.646413698057667,1.14014051673824,1.76421090831952,0.443461021310609,0,0,0,0,0.166234645358492,0.612508068787107,0.418531630736908,0,0,0,0,0,0.629484089877886,0.608261587317087,0,0,0,0.439372365468944,0.194429899074283,0,0,1.51004345451963,0,0,0.514518872071894,0,0.515672092277442,0,0,0,0.338844532069132,0,0,0.988866362566974,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,12.0459342777394,5.439770669662,8.09554787456726,8.4470934268197,13.8888335000174,5.19644354487482,0.170430322578058,0,0,0,0,0,0,0,0,0,5.02409070763864,0,0.148442139064825,0,0,0,0,0.23517741427141,0,0.247194967734374,0.144599356919912,0,0,0.441683036920787,0,1.86391761218122,0.292780797011547,0.628340120440365,2.81002760729451,0.239630249011841,0,0.127070227073065,0,0,0,0,0.255715457330331,0.20778804455956,0.162241263067758,0.101839363850316,0.248813941220186,0.252722758433675,3.78795340595653,0,0,0,0,0.0680364991513279,0.12811372028485,0,1.55222022443409,0,0,0.175951124163949,0,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0,0,0.292399974850665,0,0,0,0.102904612379284,8.59088835757875,1.58670339998127,0,0,0,0.201683524623343,0.444756087689741,0.380451252225118,2.84717436926707,1.31759163779209,1.75934646160189,1.39269530428806,1.16978452271472,6.29173586057955,2.16138049874694,2.58883655230677,0,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0.189709611372772,1.62371162777562,0.784993639206874,1.35736880313981,11.2651998293117,0.333690211432188,0.393117990226406,0.224862112384854,1.42002084971952,0.964708639009667,0.763877555344259,2.87696137450811,4.05338066937588,3.0201755450689,5.75072826109418,7.07067800570156,4.68056509671841,7.57736633841335,8.7904732625737,11.0962009913574,0.369506380333209,0,0,0,0,0.167506257441816,0,0,0.315270288212382,0.221464689648775,0.478364305972461,0,0.345369963731791,0.433947175744535,0,0.54390568381871,0,0,0.160550589987792,0,0.327869890753351,0,0,0,0,0.238968797952552,0,0,0,0,0,0.642642632843614,0.141940085208269,0,0,0.164970122972535,1.32745138339963,0,0.302323556964751,0.377210159511796,0.590603785761546,0.614870295887855,1.55056975900933,0.363533729477506,0.712994756769443,0.948110273807448,1.05418608574999,7.21948802737308,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0.469343416127421,0,0.882113592219848,0.16488625294148,0,0.301564624640779,0,0.164140899745061,2.91480836629851,0.18542530201051,0.512612642393558,0.206386867963223,0.555583582109135,0.376736914009382,0.410082683163076,0.228778173206523,0.169978429993855,0,0,0.954670618015114,0,0,0.108005340821801,0.209088296014469,0,0.404593039154462,0.909188012978695,2.09404753587224,2.98114438571124,0,0.56369293868419,0,0.165458490457098,0.194451188344048,0,0,0,0,0.104859344425711,0.724752362478018,0,0.316011120628178,0.202725215290164,0,0,0,0,0,0.147689527174577,0,0.15241361331,0,0,0.0962118416403295,0.233753804363138,0.226730383615211,0,0.179427713218951,0.167884616364078,0.19318959403219,0.750729901804728,0.183151624267265,0,2.00628841614145,0.564751842617067,0.460325236507177,0.572895513439397,0,0,0.755393897389701,0,0,0,0,0,0.399024873401031,0,0.243106717068294,0,0.183843508450014,0,0,0.64183841918363,0.505394423527595,0,0.377252682772152,0.187283014939765,0.256100609619477,0.287177344778066,0,0,0,0.824171801606613,0.147198920134397,0.685738504770831,0,0,0,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0.385813221962283,0.249810577937946,0.467863216890817,0.644613162144895,0.382576664137687,0.220591419119515,0
|phase1_expression=0.160148847104794,2.44282785347553,1.81999695755814,7.86406949397758,8.01433167914156,0.33575854382378,0.700837921786577,0.258246646883153,0,0,0,0,0.171200729931206,0.0874204024189974,0.666219523631325,0.404950534779652,0,0.315462165358238,0.274228867211478,0,0.680346321208558,0.0992909512008853,0,2.71987118748791,0.68822784320151,1.72269589234506,2.15380998079537,0.646413698057667,1.14014051673824,1.76421090831952,0.443461021310609,0,0,0,0,0.166234645358492,0.612508068787107,0.418531630736908,0,0,0,0,0,0.629484089877886,0.608261587317087,0,0,0,0.439372365468944,0.194429899074283,0,0,1.51004345451963,0,0,0.514518872071894,0,0.515672092277442,0,0,0,0.338844532069132,0,0,0.988866362566974,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,12.0459342777394,5.439770669662,8.09554787456726,8.4470934268197,13.8888335000174,5.19644354487482,0.170430322578058,0,0,0,0,0,0,0,0,0,5.02409070763864,0,0.148442139064825,0,0,0,0,0.23517741427141,0,0.247194967734374,0.144599356919912,0,0,0.441683036920787,0,1.86391761218122,0.292780797011547,0.628340120440365,2.81002760729451,0.239630249011841,0,0.127070227073065,0,0,0,0,0.255715457330331,0.20778804455956,0.162241263067758,0.101839363850316,0.248813941220186,0.252722758433675,3.78795340595653,0,0,0,0,0.0680364991513279,0.12811372028485,0,1.55222022443409,0,0,0.175951124163949,0,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0,0,0.292399974850665,0,0,0,0.102904612379284,8.59088835757875,1.58670339998127,0,0,0,0.201683524623343,0.444756087689741,0.380451252225118,2.84717436926707,1.31759163779209,1.75934646160189,1.39269530428806,1.16978452271472,6.29173586057955,2.16138049874694,2.58883655230677,0,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0.189709611372772,1.62371162777562,0.784993639206874,1.35736880313981,11.2651998293117,0.333690211432188,0.393117990226406,0.224862112384854,1.42002084971952,0.964708639009667,0.763877555344259,2.87696137450811,4.05338066937588,3.0201755450689,5.75072826109418,7.07067800570156,4.68056509671841,7.57736633841335,8.7904732625737,11.0962009913574,0.369506380333209,0,0,0,0,0.167506257441816,0,0,0.315270288212382,0.221464689648775,0.478364305972461,0,0.345369963731791,0.433947175744535,0,0.54390568381871,0,0,0.160550589987792,0,0.327869890753351,0,0,0,0,0.238968797952552,0,0,0,0,0,0.642642632843614,0.141940085208269,0,0,0.164970122972535,1.32745138339963,0,0.302323556964751,0.377210159511796,0.590603785761546,0.614870295887855,1.55056975900933,0.363533729477506,0.712994756769443,0.948110273807448,1.05418608574999,7.21948802737308,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0.469343416127421,0,0.882113592219848,0.16488625294148,0,0.301564624640779,0,0.164140899745061,2.91480836629851,0.18542530201051,0.512612642393558,0.206386867963223,0.555583582109135,0.376736914009382,0.410082683163076,0.228778173206523,0.169978429993855,0,0,0.954670618015114,0,0,0.108005340821801,0.209088296014469,0,0.404593039154462,0.909188012978695,2.09404753587224,2.98114438571124,0,0.56369293868419,0,0.165458490457098,0.194451188344048,0,0,0,0,0.104859344425711,0.724752362478018,0,0.316011120628178,0.202725215290164,0,0,0,0,0,0.147689527174577,0,0.15241361331,0,0,0.0962118416403295,0.233753804363138,0.226730383615211,0,0.179427713218951,0.167884616364078,0.19318959403219,0.750729901804728,0.183151624267265,0,2.00628841614145,0.564751842617067,0.460325236507177,0.572895513439397,0,0,0.755393897389701,0,0,0,0,0,0.399024873401031,0,0.243106717068294,0,0.183843508450014,0,0,0.64183841918363,0.505394423527595,0,0.377252682772152,0.187283014939765,0.256100609619477,0.287177344778066,0,0,0,0.824171801606613,0.147198920134397,0.685738504770831,0,0,0,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0.385813221962283,0.249810577937946,0.467863216890817,0.644613162144895,0.382576664137687,0.220591419119515,0
|short_description=p4@Rab43
|short_description=p4@Rab43
}}
}}

Latest revision as of 21:09, 1 October 2015

Short description:p4@Rab43
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Rab43_5end
Coexpression cluster:MCL_coexpression_mm9:175
Association with transcript: 111bp_to_ENSMUST00000032135, ENSMUST00000078647, NM_001039394, uc009ctx.1, uc009cua.1_5end
EntrezGene:Rab43
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p4@Rab43

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I37.86
CD326+ enterocyte, pool2.CNhs13197.11849-124I48.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C11.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.51
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F712.05
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C88.10
Mouse hepatocyte, donor6.CNhs13090.11822-124F48.45
Mouse hepatocyte, donor8.CNhs13091.11824-124F613.89
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.02
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H72.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G43.79
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I38.59
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G12.59
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H11.36
liver, adult pregnant day01.CNhs10466.508-5B211.27
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G42.88
liver, neonate N00.CNhs11117.641-24F44.05
liver, neonate N03.CNhs11123.1345-25G23.02
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H27.07
liver, neonate N10.CNhs11115.751-24B94.68
liver, neonate N20.CNhs11220.823-25A37.58
liver, neonate N25.CNhs11198.1368-26H18.79
liver, neonate N30.CNhs11106.1382-42D111.10
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I12.98
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hepatocyte5.21e-075

Uber anatomy
Ontology termp-valuen
digestive tract diverticulum2.77e-2123
sac2.77e-2123
liver6.03e-2022
epithelial sac6.03e-2022
digestive gland6.03e-2022
epithelium of foregut-midgut junction6.03e-2022
anatomical boundary6.03e-2022
hepatobiliary system6.03e-2022
foregut-midgut junction6.03e-2022
hepatic diverticulum6.03e-2022
liver primordium6.03e-2022
septum transversum6.03e-2022
liver bud6.03e-2022
exocrine gland5.23e-1725
exocrine system5.23e-1725
intestine1.48e-1531
digestive system3.52e-14116
digestive tract3.52e-14116
primitive gut3.52e-14116
endoderm-derived structure8.89e-14118
endoderm8.89e-14118
presumptive endoderm8.89e-14118
subdivision of digestive tract1.56e-13114
gastrointestinal system4.35e-1147
abdomen element1.38e-0949
abdominal segment element1.38e-0949
abdominal segment of trunk1.38e-0949
abdomen1.38e-0949
gut epithelium2.01e-0955
trunk mesenchyme1.28e-0845
epithelial tube4.63e-0747
unilaminar epithelium5.30e-0766
trunk region element7.66e-0779
mesenchyme9.16e-0761
entire embryonic mesenchyme9.16e-0761
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