FFCP PHASE1:Mm9::chr5:129458922..129458941,-: Difference between revisions
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{{FFCP|EntrezGene=231760|HGNC=|MCL_coexpression_id=1|UniProt=Q80U40,D3YXR8|association_with_transcript=295bp_to_ENSMUST00000031370,ENSMUST00000111346,NM_001081388,uc008zsl.1,uc008zsm.1,uc012edx.1_5end|description=CAGE_peak_1_at_Rimbp2_5end|id=chr5:129458922..129458941,-|ontology_enrichment_celltype=CL:0000117!8.43e-14!23;CL:0000337!8.43e-14!23;CL:0000540!1.91e-11!33;CL:0000047!1.91e-11!33;CL:0000031!1.91e-11!33;CL:0000404!1.91e-11!33;CL:0000393!9.46e-08!39;CL:0000211!9.46e-08!39;CL:0000221!8.32e-07!44;CL:0000133!8.32e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.03e-17,23;CL:0000337,1.03e-17,23;CL:0000540,1.41e-11,33;CL:0000047,1.41e-11,33;CL:0000031,1.41e-11,33;CL:0000404,1.41e-11,33;CL:0000393,1.62e-08,39;CL:0000211,1.62e-08,39;CL:0000221,3.21e-07,44;CL:0000133,3.21e-07,44;CL:0002319,5.23e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.20e-30!71;UBERON:0003075!1.20e-30!71;UBERON:0007284!1.20e-30!71;UBERON:0001049!4.40e-25!52;UBERON:0005068!4.40e-25!52;UBERON:0006241!4.40e-25!52;UBERON:0007135!4.40e-25!52;UBERON:0000033!6.60e-25!63;UBERON:0001017!8.71e-25!73;UBERON:0005743!8.71e-25!73;UBERON:0000073!2.23e-24!75;UBERON:0001016!2.23e-24!75;UBERON:0000955!5.44e-24!50;UBERON:0006238!5.44e-24!50;UBERON:0004121!1.02e-23!102;UBERON:0000924!1.02e-23!102;UBERON:0006601!1.02e-23!102;UBERON:0002616!3.46e-23!49;UBERON:0003056!5.58e-23!49;UBERON:0003080!4.48e-21!40;UBERON:0002780!2.56e-20!39;UBERON:0001890!2.56e-20!39;UBERON:0006240!2.56e-20!39;UBERON:0002020!5.60e-19!34;UBERON:0002791!7.26e-16!29;UBERON:0003528!7.26e-16!29;UBERON:0001893!7.26e-16!29;UBERON:0007811!1.85e-12!86;UBERON:0000956!4.41e-11!21;UBERON:0001869!4.41e-11!21;UBERON:0000203!4.41e-11!21;UBERON:0000153!8.96e-10!94;UBERON:0002619!3.58e-09!17;UBERON:0002021!5.72e-09!10;UBERON:0000411!5.72e-09!10;UBERON:0001950!5.72e-09!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.90e-34,54;UBERON:0001049,6.37e-32,52;UBERON:0005068,6.37e-32,52;UBERON:0006241,6.37e-32,52;UBERON:0007135,6.37e-32,52;UBERON:0002346,6.83e-31,64;UBERON:0003075,6.83e-31,64;UBERON:0007284,6.83e-31,64;UBERON:0001017,2.82e-29,73;UBERON:0001016,6.26e-28,75;UBERON:0000955,1.04e-27,47;UBERON:0006238,1.04e-27,47;UBERON:0002616,1.12e-26,46;UBERON:0010371,1.28e-26,73;UBERON:0003056,5.11e-26,49;UBERON:0003080,5.73e-26,40;UBERON:0002020,3.17e-25,34;UBERON:0002780,5.59e-25,39;UBERON:0001890,5.59e-25,39;UBERON:0006240,5.59e-25,39;UBERON:0004121,4.65e-24,95;UBERON:0000924,4.65e-24,95;UBERON:0006601,4.65e-24,95;UBERON:0010314,1.20e-23,92;UBERON:0003528,4.31e-21,29;UBERON:0002791,4.31e-21,29;UBERON:0001893,4.31e-21,29;UBERON:0000956,9.63e-15,21;UBERON:0001869,9.63e-15,21;UBERON:0000203,9.63e-15,21;UBERON:0002619,3.20e-12,17;UBERON:0002021,2.44e-11,10;UBERON:0000411,2.44e-11,10;UBERON:0001950,2.44e-11,10;UBERON:0002420,1.56e-07,8;UBERON:0007245,1.56e-07,8;UBERON:0010009,1.56e-07,8;UBERON:0010011,1.56e-07,8;UBERON:0000454,1.56e-07,8|phase1_expression=1.92178616525753,0,0,0,0,1.6787927191189,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14660173558958,0,0,0,0,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.46254444320914,7.40587370980846,9.50747105259269,0,0,0,0,0.7104801149461,0,0,1.97010263386108,3.64516033495565,2.94454945891935,7.14127461009509,7.50953039235486,3.67472397644862,2.1086003624012,5.51531271966013,15.4162233399144,8.2996769755372,9.83081812839958,6.3305418110493,8.05091263701205,5.2091337055676,6.97957497503452,10.6924895906019,10.2374826010463,9.42811473515737,10.8202477407318,6.33758115806022,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0,0,0,1.12674735821344,0,0,0,0,0,0,0.34255163915718,0,2.3750742250372,2.60227990149204,2.43572382649713,2.07553947530453,2.86373017049983,2.58695155698551,0.628332956648377,0,0,0,0,0,0,0,1.17112318804619,2.72280718857492,0,0,0,0,16.7765516133401,13.7250180845588,6.53402630986895,25.0307021076878,24.8043993610421,14.3373750746096,14.9261962022337,0,0,0,1.26265113531884,0.650602214813519,0.229902104433473,0.540186389416048,1.05493372485001,2.9255694635071,2.69038812598185,2.15513966487376,4.9153640440413,0,0,0,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0.621377317606506,0.234526059981096,0,0.23674473558521,0.393528463494808,0.617068451549513,0.232533944750408,1.07309360559848,0.116765342367169,0.16455984991348,0,0,0,0,0,39.1139304329277,6.48299057989492,0,0.264450566663544,0.853153002140936,0,0.515469845288373,0.605050573870028,0.444756087689741,0.951128130562796,0.474529061544512,0.329397909448022,0.502670417600539,0.198956472041151,0.19496408711912,0.898819408654221,0.216138049874694,0.398282546508734,0,0.342745537829186,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0.509235257325564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3990918891332,10.9006868530749,0,0,1.26203287766503,0.780877488593277,0.861693590931196,0.477937595905104,0,0,0.809621403349789,0,0.395287777946524,23.4564560987919,0,0,0,0.164970122972535,0,2.18502572539483,1.81394134178851,1.32023555829129,0.885905678642318,3.68922177532713,4.13485269069154,2.90826983582004,3.92147116223193,1.8962205476149,0,0,11.234506989875,0.540183282093931,0.646793418913773,1.71469628025274,4.07882537377229,3.21063871683727,5.26556865926787,7.30715877875038,0,0,0,0,0,0,0,0,1.45740418314925,10.5692422145991,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0,0.218362563746178,0.404593039154462,0.330613822901344,0.785267825952089,0.259229946583586,0,0,0,0.330916980914195,0,0,0.168956125490778,0.234714477291508,2.0832701575032,0.419437377702843,0,0,0,0.405450430580328,0.205421914329655,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0.428736758158132,0,25.9785847603851,23.9369122983732,19.4784474569395,16.497905504994,28.773465830367,30.9711497929777,22.2757425076496,21.1650965515384,26.2822597210839,23.2992140288319,0.31136204275253,1.19707462020309,3.07320490357441,0.972426868273176,2.09613162627982,1.83843508450014,2.22246727801615,1.64828045791115,1.28367683836726,1.76888048234658,2.5347929989024,0.943131706930381,1.591905626988,1.98477972455095,1.60819313075717,2.38146845641537,1.39061191133827,1.54327376370964,1.23625770240992,2.20798380201596,2.05721551431249,2.8396128985494,0.715308569841963,2.0348498328526,1.50575008664529,2.45382362885862,1.82927972872773,1.57841826862706,1.7654534799962,2.24456908663095,1.42362021749009,1.37906275325789,0.818462086339379,1.85924209423159,0.964533054905707,3.74715866906919,1.63752125911786,1.07435527024149,1.72159498861959,0.441182838239031,0.463735671240843|short_description=p1@Rimbp2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=231760 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q80U40,D3YXR8 | |||
|association_with_transcript=295bp_to_ENSMUST00000031370,ENSMUST00000111346,NM_001081388,uc008zsl.1,uc008zsm.1,uc012edx.1_5end | |||
|cluster_id=chr5:129458922..129458941,- | |||
|description=CAGE_peak_1_at_Rimbp2_5end | |||
|id=chr5:129458922..129458941,- | |||
|ontology_enrichment_celltype=CL:0000117!8.43e-14!23;CL:0000337!8.43e-14!23;CL:0000540!1.91e-11!33;CL:0000047!1.91e-11!33;CL:0000031!1.91e-11!33;CL:0000404!1.91e-11!33;CL:0000393!9.46e-08!39;CL:0000211!9.46e-08!39;CL:0000221!8.32e-07!44;CL:0000133!8.32e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.03e-17,23;CL:0000337,1.03e-17,23;CL:0000540,1.41e-11,33;CL:0000047,1.41e-11,33;CL:0000031,1.41e-11,33;CL:0000404,1.41e-11,33;CL:0000393,1.62e-08,39;CL:0000211,1.62e-08,39;CL:0000221,3.21e-07,44;CL:0000133,3.21e-07,44;CL:0002319,5.23e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.20e-30!71;UBERON:0003075!1.20e-30!71;UBERON:0007284!1.20e-30!71;UBERON:0001049!4.40e-25!52;UBERON:0005068!4.40e-25!52;UBERON:0006241!4.40e-25!52;UBERON:0007135!4.40e-25!52;UBERON:0000033!6.60e-25!63;UBERON:0001017!8.71e-25!73;UBERON:0005743!8.71e-25!73;UBERON:0000073!2.23e-24!75;UBERON:0001016!2.23e-24!75;UBERON:0000955!5.44e-24!50;UBERON:0006238!5.44e-24!50;UBERON:0004121!1.02e-23!102;UBERON:0000924!1.02e-23!102;UBERON:0006601!1.02e-23!102;UBERON:0002616!3.46e-23!49;UBERON:0003056!5.58e-23!49;UBERON:0003080!4.48e-21!40;UBERON:0002780!2.56e-20!39;UBERON:0001890!2.56e-20!39;UBERON:0006240!2.56e-20!39;UBERON:0002020!5.60e-19!34;UBERON:0002791!7.26e-16!29;UBERON:0003528!7.26e-16!29;UBERON:0001893!7.26e-16!29;UBERON:0007811!1.85e-12!86;UBERON:0000956!4.41e-11!21;UBERON:0001869!4.41e-11!21;UBERON:0000203!4.41e-11!21;UBERON:0000153!8.96e-10!94;UBERON:0002619!3.58e-09!17;UBERON:0002021!5.72e-09!10;UBERON:0000411!5.72e-09!10;UBERON:0001950!5.72e-09!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.90e-34,54;UBERON:0001049,6.37e-32,52;UBERON:0005068,6.37e-32,52;UBERON:0006241,6.37e-32,52;UBERON:0007135,6.37e-32,52;UBERON:0002346,6.83e-31,64;UBERON:0003075,6.83e-31,64;UBERON:0007284,6.83e-31,64;UBERON:0001017,2.82e-29,73;UBERON:0001016,6.26e-28,75;UBERON:0000955,1.04e-27,47;UBERON:0006238,1.04e-27,47;UBERON:0002616,1.12e-26,46;UBERON:0010371,1.28e-26,73;UBERON:0003056,5.11e-26,49;UBERON:0003080,5.73e-26,40;UBERON:0002020,3.17e-25,34;UBERON:0002780,5.59e-25,39;UBERON:0001890,5.59e-25,39;UBERON:0006240,5.59e-25,39;UBERON:0004121,4.65e-24,95;UBERON:0000924,4.65e-24,95;UBERON:0006601,4.65e-24,95;UBERON:0010314,1.20e-23,92;UBERON:0003528,4.31e-21,29;UBERON:0002791,4.31e-21,29;UBERON:0001893,4.31e-21,29;UBERON:0000956,9.63e-15,21;UBERON:0001869,9.63e-15,21;UBERON:0000203,9.63e-15,21;UBERON:0002619,3.20e-12,17;UBERON:0002021,2.44e-11,10;UBERON:0000411,2.44e-11,10;UBERON:0001950,2.44e-11,10;UBERON:0002420,1.56e-07,8;UBERON:0007245,1.56e-07,8;UBERON:0010009,1.56e-07,8;UBERON:0010011,1.56e-07,8;UBERON:0000454,1.56e-07,8 | |||
|phase1_expression=1.92178616525753,0,0,0,0,1.6787927191189,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14660173558958,0,0,0,0,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.46254444320914,7.40587370980846,9.50747105259269,0,0,0,0,0.7104801149461,0,0,1.97010263386108,3.64516033495565,2.94454945891935,7.14127461009509,7.50953039235486,3.67472397644862,2.1086003624012,5.51531271966013,15.4162233399144,8.2996769755372,9.83081812839958,6.3305418110493,8.05091263701205,5.2091337055676,6.97957497503452,10.6924895906019,10.2374826010463,9.42811473515737,10.8202477407318,6.33758115806022,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0,0,0,1.12674735821344,0,0,0,0,0,0,0.34255163915718,0,2.3750742250372,2.60227990149204,2.43572382649713,2.07553947530453,2.86373017049983,2.58695155698551,0.628332956648377,0,0,0,0,0,0,0,1.17112318804619,2.72280718857492,0,0,0,0,16.7765516133401,13.7250180845588,6.53402630986895,25.0307021076878,24.8043993610421,14.3373750746096,14.9261962022337,0,0,0,1.26265113531884,0.650602214813519,0.229902104433473,0.540186389416048,1.05493372485001,2.9255694635071,2.69038812598185,2.15513966487376,4.9153640440413,0,0,0,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0.621377317606506,0.234526059981096,0,0.23674473558521,0.393528463494808,0.617068451549513,0.232533944750408,1.07309360559848,0.116765342367169,0.16455984991348,0,0,0,0,0,39.1139304329277,6.48299057989492,0,0.264450566663544,0.853153002140936,0,0.515469845288373,0.605050573870028,0.444756087689741,0.951128130562796,0.474529061544512,0.329397909448022,0.502670417600539,0.198956472041151,0.19496408711912,0.898819408654221,0.216138049874694,0.398282546508734,0,0.342745537829186,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0.509235257325564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3990918891332,10.9006868530749,0,0,1.26203287766503,0.780877488593277,0.861693590931196,0.477937595905104,0,0,0.809621403349789,0,0.395287777946524,23.4564560987919,0,0,0,0.164970122972535,0,2.18502572539483,1.81394134178851,1.32023555829129,0.885905678642318,3.68922177532713,4.13485269069154,2.90826983582004,3.92147116223193,1.8962205476149,0,0,11.234506989875,0.540183282093931,0.646793418913773,1.71469628025274,4.07882537377229,3.21063871683727,5.26556865926787,7.30715877875038,0,0,0,0,0,0,0,0,1.45740418314925,10.5692422145991,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0,0.218362563746178,0.404593039154462,0.330613822901344,0.785267825952089,0.259229946583586,0,0,0,0.330916980914195,0,0,0.168956125490778,0.234714477291508,2.0832701575032,0.419437377702843,0,0,0,0.405450430580328,0.205421914329655,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0.428736758158132,0,25.9785847603851,23.9369122983732,19.4784474569395,16.497905504994,28.773465830367,30.9711497929777,22.2757425076496,21.1650965515384,26.2822597210839,23.2992140288319,0.31136204275253,1.19707462020309,3.07320490357441,0.972426868273176,2.09613162627982,1.83843508450014,2.22246727801615,1.64828045791115,1.28367683836726,1.76888048234658,2.5347929989024,0.943131706930381,1.591905626988,1.98477972455095,1.60819313075717,2.38146845641537,1.39061191133827,1.54327376370964,1.23625770240992,2.20798380201596,2.05721551431249,2.8396128985494,0.715308569841963,2.0348498328526,1.50575008664529,2.45382362885862,1.82927972872773,1.57841826862706,1.7654534799962,2.24456908663095,1.42362021749009,1.37906275325789,0.818462086339379,1.85924209423159,0.964533054905707,3.74715866906919,1.63752125911786,1.07435527024149,1.72159498861959,0.441182838239031,0.463735671240843 | |||
|short_description=p1@Rimbp2 | |||
}} |
Latest revision as of 22:35, 1 October 2015
Short description: | p1@Rimbp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rimbp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 295bp_to_ENSMUST00000031370, ENSMUST00000111346, NM_001081388, uc008zsl.1, uc008zsm.1, uc012edx.1_5end |
EntrezGene: | Rimbp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.03e-17 | 23 |
neuroblast (sensu Vertebrata) | 1.03e-17 | 23 |
neuron | 1.41e-11 | 33 |
neuronal stem cell | 1.41e-11 | 33 |
neuroblast | 1.41e-11 | 33 |
electrically signaling cell | 1.41e-11 | 33 |
electrically responsive cell | 1.62e-08 | 39 |
electrically active cell | 1.62e-08 | 39 |
ectodermal cell | 3.21e-07 | 44 |
neurectodermal cell | 3.21e-07 | 44 |
neural cell | 5.23e-07 | 43 |