Personal tools

FFCP PHASE1:Mm9::chr13:83712735..83712761,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=17260
|EntrezGene=17260
|HGNC=
|HGNC=
|MCL_coexpression_id=28
|TSSclassifier=NA
|UniProt=Q8CFN5
|UniProt=Q8CFN5
|association_with_transcript=-14bp_to_uc007rih.2_5end
|association_with_transcript=-14bp_to_uc007rih.2_5end
|cluster_id=chr13:83712735..83712761,+
|description=CAGE_peak_9_at_Mef2c_5end
|description=CAGE_peak_9_at_Mef2c_5end
|id=chr13:83712735..83712761,+
|id=chr13:83712735..83712761,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003914!4.44e-09!47;UBERON:0005172!6.94e-08!49;UBERON:0005173!6.94e-08!49;UBERON:0002417!6.94e-08!49;UBERON:0000916!6.94e-08!49;UBERON:0000473!2.41e-07!14;UBERON:0000991!9.16e-07!18;UBERON:0005564!9.16e-07!18
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.34e-23,14;UBERON:0003135,2.62e-21,15;UBERON:0003101,6.80e-20,16;UBERON:0000079,6.80e-20,16;UBERON:0004176,1.20e-18,17;UBERON:0009196,1.20e-18,17;UBERON:0009117,1.20e-18,17;UBERON:0000991,1.55e-17,18;UBERON:0005564,1.55e-17,18;UBERON:0003133,8.18e-13,24;UBERON:0005156,1.01e-11,26;UBERON:0000990,1.01e-11,26;UBERON:0001048,5.24e-08,134;UBERON:0002323,7.90e-08,37;UBERON:0004458,7.90e-08,37;UBERON:0003886,1.38e-07,38;UBERON:0002553,2.34e-07,39;UBERON:0000926,6.18e-07,120;UBERON:0004120,6.18e-07,120;UBERON:0006603,6.18e-07,120
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607425802169478,0,0.157731082679119,0.137114433605739,0.42438965179803,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.53647670624362,0,0,0,0.649776417447669,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.517875767294343,1.7813056687779,0.346970653532272,0,0.230615497256059,0.452167921657868,1.41106448562846,0.502666365318702,0,1.73519228303894,0.884610551949874,0.323533699894818,0,0,0,0,0,0,0.359445373517761,0,0.254140454146129,0,0,0,0,0.255715457330331,0,0.162241263067758,0,0.497627882440372,0,28.409650544674,0,0,0,0.150704817835715,0,0,0,14.2286853906459,0,0,0.175951124163949,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0.414251545071004,0,0.180062061461015,0,0.393528463494808,0.154267112887378,0.465067889500816,0.268273401399619,0.700592054203017,0.822799249567402,0.656669856316381,1.86458261955468,1.90059983652932,2.19550115291051,3.89198614405078,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0.126473074248515,0.147610147979602,0,0.123397163921801,0.592905254174298,0.83422552858047,0.589676985339609,0.224862112384854,0.608580364165509,0.241177159752417,0.50925170356284,0.287696137450811,0.972811360650212,0.549122826376163,1.43768206527355,1.86070473834252,0,0.757736633841335,0.358794827043824,0,0.184753190166605,0.189491411770485,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0.144649058581512,0,0,1.47529281905711,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.49465875882444,0,0.241251699712623,0.119372344003136,0.164140899745061,0,0,0,0.412773735926445,0,0.376736914009382,0.27338845544205,0.457556346413045,0.509935289981566,0.419854356970974,0.414599921413271,0,0,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,4.78452947340732,3.14371131868485,2.52786544847262,5.03723311563151,7.09615727061268,8.21500670520278,5.07797100891405,3.56521771047417,0.966336483304024,1.72818003754719,0,0,0,0,0.179026695667481,0.198681354781265,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0.19318959403219,0.750729901804728,0.183151624267265,0,0,0.564751842617067,0,0,0,0,0,0,0,0.453142408984205,0.51776031175182,0,0,0.170733605754134,0,0,0.735374033800057,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0.377252682772152,0.37456602987953,0.448176066834085,0.229741875822453,0,0.231768651889711,0.38581844092741,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0,0.145346416632329,0.282328141245992,0.338458431566706,0.182927972872773,0.526139422875686,0.135804113845862,0,0.118635018124174,0.394017929502254,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0.231867835620421
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607425802169478,0,0.157731082679119,0.137114433605739,0.42438965179803,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.53647670624362,0,0,0,0.649776417447669,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.517875767294343,1.7813056687779,0.346970653532272,0,0.230615497256059,0.452167921657868,1.41106448562846,0.502666365318702,0,1.73519228303894,0.884610551949874,0.323533699894818,0,0,0,0,0,0,0.359445373517761,0,0.254140454146129,0,0,0,0,0.255715457330331,0,0.162241263067758,0,0.497627882440372,0,28.409650544674,0,0,0,0.150704817835715,0,0,0,14.2286853906459,0,0,0.175951124163949,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0.414251545071004,0,0.180062061461015,0,0.393528463494808,0.154267112887378,0.465067889500816,0.268273401399619,0.700592054203017,0.822799249567402,0.656669856316381,1.86458261955468,1.90059983652932,2.19550115291051,3.89198614405078,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0.126473074248515,0.147610147979602,0,0.123397163921801,0.592905254174298,0.83422552858047,0.589676985339609,0.224862112384854,0.608580364165509,0.241177159752417,0.50925170356284,0.287696137450811,0.972811360650212,0.549122826376163,1.43768206527355,1.86070473834252,0,0.757736633841335,0.358794827043824,0,0.184753190166605,0.189491411770485,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0.144649058581512,0,0,1.47529281905711,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.49465875882444,0,0.241251699712623,0.119372344003136,0.164140899745061,0,0,0,0.412773735926445,0,0.376736914009382,0.27338845544205,0.457556346413045,0.509935289981566,0.419854356970974,0.414599921413271,0,0,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,4.78452947340732,3.14371131868485,2.52786544847262,5.03723311563151,7.09615727061268,8.21500670520278,5.07797100891405,3.56521771047417,0.966336483304024,1.72818003754719,0,0,0,0,0.179026695667481,0.198681354781265,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0.19318959403219,0.750729901804728,0.183151624267265,0,0,0.564751842617067,0,0,0,0,0,0,0,0.453142408984205,0.51776031175182,0,0,0.170733605754134,0,0,0.735374033800057,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0.377252682772152,0.37456602987953,0.448176066834085,0.229741875822453,0,0.231768651889711,0.38581844092741,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0,0.145346416632329,0.282328141245992,0.338458431566706,0.182927972872773,0.526139422875686,0.135804113845862,0,0.118635018124174,0.394017929502254,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0.231867835620421
|short_description=p9@Mef2c
|short_description=p9@Mef2c
}}
}}

Latest revision as of 23:27, 1 October 2015

Short description:p9@Mef2c
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_9_at_Mef2c_5end
Coexpression cluster:MCL_coexpression_mm9:28
Association with transcript: -14bp_to_uc007rih.2_5end
EntrezGene:Mef2c
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
5
10
15
20
25
30




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data