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FFCP PHASE1:Mm9::chr13:88961487..88961519,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=13612
|EntrezGene=13612
|HGNC=
|HGNC=
|MCL_coexpression_id=2876
|TSSclassifier=NA
|UniProt=Q8C4U8
|UniProt=Q8C4U8
|association_with_transcript=240bp_to_ENSMUST00000043111_5end
|association_with_transcript=240bp_to_ENSMUST00000043111_5end
|cluster_id=chr13:88961487..88961519,+
|description=CAGE_peak_4_at_Edil3_5end
|description=CAGE_peak_4_at_Edil3_5end
|id=chr13:88961487..88961519,+
|id=chr13:88961487..88961519,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!9.03e-14!75;UBERON:0001016!9.03e-14!75;UBERON:0004121!1.47e-13!102;UBERON:0000924!1.47e-13!102;UBERON:0006601!1.47e-13!102;UBERON:0001017!2.46e-13!73;UBERON:0005743!2.46e-13!73;UBERON:0002346!1.24e-11!71;UBERON:0003075!1.24e-11!71;UBERON:0007284!1.24e-11!71;UBERON:0000955!3.27e-11!50;UBERON:0006238!3.27e-11!50;UBERON:0000033!4.65e-11!63;UBERON:0001049!7.44e-11!52;UBERON:0005068!7.44e-11!52;UBERON:0006241!7.44e-11!52;UBERON:0007135!7.44e-11!52;UBERON:0002616!1.01e-10!49;UBERON:0003056!2.91e-08!49;UBERON:0003080!2.16e-07!40;UBERON:0002780!7.02e-07!39;UBERON:0001890!7.02e-07!39;UBERON:0006240!7.02e-07!39
|ontology_enrichment_uberon=UBERON:0000073!9.03e-14!75;UBERON:0001016!9.03e-14!75;UBERON:0004121!1.47e-13!102;UBERON:0000924!1.47e-13!102;UBERON:0006601!1.47e-13!102;UBERON:0001017!2.46e-13!73;UBERON:0005743!2.46e-13!73;UBERON:0002346!1.24e-11!71;UBERON:0003075!1.24e-11!71;UBERON:0007284!1.24e-11!71;UBERON:0000955!3.27e-11!50;UBERON:0006238!3.27e-11!50;UBERON:0000033!4.65e-11!63;UBERON:0001049!7.44e-11!52;UBERON:0005068!7.44e-11!52;UBERON:0006241!7.44e-11!52;UBERON:0007135!7.44e-11!52;UBERON:0002616!1.01e-10!49;UBERON:0003056!2.91e-08!49;UBERON:0003080!2.16e-07!40;UBERON:0002780!7.02e-07!39;UBERON:0001890!7.02e-07!39;UBERON:0006240!7.02e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.04e-12,54;UBERON:0001016,1.88e-12,75;UBERON:0001017,3.63e-12,73;UBERON:0001049,3.43e-11,52;UBERON:0005068,3.43e-11,52;UBERON:0006241,3.43e-11,52;UBERON:0007135,3.43e-11,52;UBERON:0000955,8.65e-10,47;UBERON:0006238,8.65e-10,47;UBERON:0004121,3.06e-09,95;UBERON:0000924,3.06e-09,95;UBERON:0006601,3.06e-09,95;UBERON:0002616,3.43e-09,46;UBERON:0002346,3.56e-09,64;UBERON:0003075,3.56e-09,64;UBERON:0007284,3.56e-09,64;UBERON:0002021,1.10e-08,10;UBERON:0000411,1.10e-08,10;UBERON:0001950,1.10e-08,10;UBERON:0010371,3.15e-07,73;UBERON:0003080,8.45e-07,40
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,1.56478268869608,0,0,0.58328969722285,2.37976916763116,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,1.26766280701236,3.38844532069132,3.55717918444456,0,0,0,1.49800055259202,0,0.518448061542388,0.675029691658453,0.210324961351382,0.571301968807607,1.98781686856452,0,0,0,14.3150645299205,10.3426743849002,9.36999852863085,0.263772575460388,0.914876436024097,0,3.35019598801657,2.25105044012672,7.18151764551008,2.06240009831567,2.13557521198654,1.3047961207771,0.37863096666592,6.19686792875641,0,0,0,0,0,0,1.54488862144927,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0.776813650941515,2.22663208597237,0.346970653532272,0.608930956624282,0.230615497256059,0.904335843315735,0.823120949949934,1.0053327306374,0,0.722996784599558,4.42305275974937,6.63244084784378,4.85851340612866,6.30337829075789,0,4.39171195517321,2.30391377494801,0,0.359445373517761,0,0.254140454146129,9.43681028250383,9.15001205637253,0.628271760564322,5.73620256634512,6.13717097592793,11.0127663616567,7.46309810111685,0.407357455401265,6.84238338355512,0.252722758433675,2.52530227063769,0.260240885925407,0.689706313300419,0.540186389416048,1.05493372485001,0.884474488967262,0.640568601424249,0.374806898238915,4.39795730256327,0,0.189106080167819,0.175951124163949,0.43839146485515,1.11218899690239,3.83077383174383,4.7329891373827,0.796137067273973,0.702213187313235,0.257347907114715,0,1.44988040774851,1.64168241986767,1.2604344302271,0.946978942340841,0.393528463494808,0.154267112887378,0.232533944750408,0.804820204198858,0.116765342367169,0,0,0.0810688095458557,0.438599962275997,0.219550115291051,0.134206418760372,5.25724871410318,0.92614151141356,0,0.264450566663544,0.853153002140936,1.16118335930219,1.54640953586512,0.403367049246685,0.444756087689741,0.760902504450237,0.474529061544512,0.658795818896044,0,0.596869416123452,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0.189667900953082,0.342745537829186,0,0.203651327845314,0.581857461502877,0.280543279561274,0.442655759869801,0.442830443938806,1.09899109488962,0.123397163921801,0,0.166845105716094,0.393117990226406,0,0.405720242777006,0,0,0,0.162135226775035,0,0,1.11642284300551,0,0,0,0,3.8798169934987,0.37898282354097,0.977789858652155,0.678980343100753,1.40814148973101,2.01007508930179,2.85652369063216,1.17080188714679,5.35959489961049,4.4292937929755,4.78364305972461,5.07976275618788,6.21665934717224,4.91806799177139,1.50791283939272,0,0,0,14.1284519189257,13.83097901788,2.29508923527346,1.26235463602186,0,0.390438744296638,0.646270193198397,1.19484398976276,0.891194696329576,2.83076530788832,0.404810701674894,0.876767573733936,1.97643888973262,4.4984984299053,0.141940085208269,0.35613120733451,0.81443479676788,0.494910368917606,0,0,0.302323556964751,0,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0.632073515871632,0,0,8.85142974959849,0.540183282093931,0.517434735131018,1.07168517515796,1.24138163549592,0.713475270408282,1.15184314421485,0.304464949114599,0.469343416127421,0,1.10264199027481,1.31909002353184,0.968786560175433,0.301564624640779,0.477489376012546,0.984845398470368,0.291480836629851,13.1651964427462,0,0.412773735926445,1.85194527369712,0,0,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0.158167996790568,0.609958401380546,0.324016022465404,0.209088296014469,0.87345025498471,0.134864346384821,0.165306911450672,0,0.518459893167171,0,0,0,0,0.388902376688095,0.258319646955462,0.168956125490778,0.234714477291508,0,0,0.241584120826006,0,0.316011120628178,0,0,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0.226730383615211,0.887943813496259,0,0,0.579568782096571,0,0.36630324853453,0.214368379079066,0,2.25900737046827,4.14292712856459,2.86447756719698,3.43706364687375,13.0165678756422,7.55393897389701,1.35004500046361,7.20513925158753,4.07828168085784,6.21312374102184,0.103787347584177,0,0.341467211508268,1.21553358534147,0.628839487883947,0.551530525350042,0.888986911206461,1.44224540067226,1.28367683836726,1.01078884705519,0.50695859978048,1.69763707247469,1.68554713445788,1.34452820050225,0.918967503289812,1.90517476513229,1.50649623728312,0.38581844092741,1.23625770240992,1.03039244094078,1.02860775715625,2.12970967391205,2.38436189947321,1.30811774969096,1.12931256498397,1.35383372626682,1.46342378298218,2.10455769150274,1.49384525230448,2.24456908663095,1.42362021749009,0.985044823755635,2.45538625901814,1.54936841185966,1.15743966588685,0.499621155875892,2.33931608445408,1.50409737833809,3.44318997723918,2.8676884485537,3.94175320554716
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,1.56478268869608,0,0,0.58328969722285,2.37976916763116,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,1.26766280701236,3.38844532069132,3.55717918444456,0,0,0,1.49800055259202,0,0.518448061542388,0.675029691658453,0.210324961351382,0.571301968807607,1.98781686856452,0,0,0,14.3150645299205,10.3426743849002,9.36999852863085,0.263772575460388,0.914876436024097,0,3.35019598801657,2.25105044012672,7.18151764551008,2.06240009831567,2.13557521198654,1.3047961207771,0.37863096666592,6.19686792875641,0,0,0,0,0,0,1.54488862144927,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0.776813650941515,2.22663208597237,0.346970653532272,0.608930956624282,0.230615497256059,0.904335843315735,0.823120949949934,1.0053327306374,0,0.722996784599558,4.42305275974937,6.63244084784378,4.85851340612866,6.30337829075789,0,4.39171195517321,2.30391377494801,0,0.359445373517761,0,0.254140454146129,9.43681028250383,9.15001205637253,0.628271760564322,5.73620256634512,6.13717097592793,11.0127663616567,7.46309810111685,0.407357455401265,6.84238338355512,0.252722758433675,2.52530227063769,0.260240885925407,0.689706313300419,0.540186389416048,1.05493372485001,0.884474488967262,0.640568601424249,0.374806898238915,4.39795730256327,0,0.189106080167819,0.175951124163949,0.43839146485515,1.11218899690239,3.83077383174383,4.7329891373827,0.796137067273973,0.702213187313235,0.257347907114715,0,1.44988040774851,1.64168241986767,1.2604344302271,0.946978942340841,0.393528463494808,0.154267112887378,0.232533944750408,0.804820204198858,0.116765342367169,0,0,0.0810688095458557,0.438599962275997,0.219550115291051,0.134206418760372,5.25724871410318,0.92614151141356,0,0.264450566663544,0.853153002140936,1.16118335930219,1.54640953586512,0.403367049246685,0.444756087689741,0.760902504450237,0.474529061544512,0.658795818896044,0,0.596869416123452,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0.189667900953082,0.342745537829186,0,0.203651327845314,0.581857461502877,0.280543279561274,0.442655759869801,0.442830443938806,1.09899109488962,0.123397163921801,0,0.166845105716094,0.393117990226406,0,0.405720242777006,0,0,0,0.162135226775035,0,0,1.11642284300551,0,0,0,0,3.8798169934987,0.37898282354097,0.977789858652155,0.678980343100753,1.40814148973101,2.01007508930179,2.85652369063216,1.17080188714679,5.35959489961049,4.4292937929755,4.78364305972461,5.07976275618788,6.21665934717224,4.91806799177139,1.50791283939272,0,0,0,14.1284519189257,13.83097901788,2.29508923527346,1.26235463602186,0,0.390438744296638,0.646270193198397,1.19484398976276,0.891194696329576,2.83076530788832,0.404810701674894,0.876767573733936,1.97643888973262,4.4984984299053,0.141940085208269,0.35613120733451,0.81443479676788,0.494910368917606,0,0,0.302323556964751,0,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0.632073515871632,0,0,8.85142974959849,0.540183282093931,0.517434735131018,1.07168517515796,1.24138163549592,0.713475270408282,1.15184314421485,0.304464949114599,0.469343416127421,0,1.10264199027481,1.31909002353184,0.968786560175433,0.301564624640779,0.477489376012546,0.984845398470368,0.291480836629851,13.1651964427462,0,0.412773735926445,1.85194527369712,0,0,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0.158167996790568,0.609958401380546,0.324016022465404,0.209088296014469,0.87345025498471,0.134864346384821,0.165306911450672,0,0.518459893167171,0,0,0,0,0.388902376688095,0.258319646955462,0.168956125490778,0.234714477291508,0,0,0.241584120826006,0,0.316011120628178,0,0,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0.226730383615211,0.887943813496259,0,0,0.579568782096571,0,0.36630324853453,0.214368379079066,0,2.25900737046827,4.14292712856459,2.86447756719698,3.43706364687375,13.0165678756422,7.55393897389701,1.35004500046361,7.20513925158753,4.07828168085784,6.21312374102184,0.103787347584177,0,0.341467211508268,1.21553358534147,0.628839487883947,0.551530525350042,0.888986911206461,1.44224540067226,1.28367683836726,1.01078884705519,0.50695859978048,1.69763707247469,1.68554713445788,1.34452820050225,0.918967503289812,1.90517476513229,1.50649623728312,0.38581844092741,1.23625770240992,1.03039244094078,1.02860775715625,2.12970967391205,2.38436189947321,1.30811774969096,1.12931256498397,1.35383372626682,1.46342378298218,2.10455769150274,1.49384525230448,2.24456908663095,1.42362021749009,0.985044823755635,2.45538625901814,1.54936841185966,1.15743966588685,0.499621155875892,2.33931608445408,1.50409737833809,3.44318997723918,2.8676884485537,3.94175320554716
|short_description=p4@Edil3
|short_description=p4@Edil3
}}
}}

Latest revision as of 23:52, 1 October 2015

Short description:p4@Edil3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Edil3_5end
Coexpression cluster:MCL_coexpression_mm9:2876
Association with transcript: 240bp_to_ENSMUST00000043111_5end
EntrezGene:Edil3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Edil3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.38
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D314.32
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.34
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.37
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.18
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F96.20
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D72.23
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F56.63
bone (os femoris), neonate N16.CNhs11225.1525-43A64.86
bone (os femoris), neonate N20.CNhs11195.1350-25C36.30
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.39
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A49.44
corpus striatum, adult.CNhs10487.19-21D89.15
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D55.74
cortex, neonate N30.CNhs11107.1392-42F26.14
diencephalon, adult.CNhs10482.20-12F211.01
diencephalon, neonate N30.CNhs11201.1388-42B27.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.84
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.88
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A24.40
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C43.83
forelimb, embryo E18.CNhs11008.1520-43B54.73
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E85.26
hippocampus, neonate N00.CNhs11228.627-43G10.93
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B13.88
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E55.36
lung, neonate N07.CNhs11111.715-19A34.43
lung, neonate N10.CNhs11219.750-23E64.78
lung, neonate N20.CNhs11109.822-18A45.08
lung, neonate N25.CNhs11119.1359-25C76.22
lung, neonate N30.CNhs11133.1394-42H24.92
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C214.13
medulla oblongata, neonate N30.CNhs11200.1396-42A313.83
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.30
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G88.85
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C913.17
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F21.85
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.02
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C63.44
whole body, neonate N06.CNhs10515.692-21D12.87
whole body, neonate N10.CNhs10518.761-6B43.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.04e-1254
nervous system1.88e-1275
central nervous system3.63e-1273
neural tube3.43e-1152
neural rod3.43e-1152
future spinal cord3.43e-1152
neural keel3.43e-1152
brain8.65e-1047
future brain8.65e-1047
ectoderm-derived structure3.06e-0995
ectoderm3.06e-0995
presumptive ectoderm3.06e-0995
regional part of brain3.43e-0946
neurectoderm3.56e-0964
neural plate3.56e-0964
presumptive neural plate3.56e-0964
occipital lobe1.10e-0810
visual cortex1.10e-0810
neocortex1.10e-0810
ecto-epithelium3.15e-0773
anterior neural tube8.45e-0740
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