Personal tools

FFCP PHASE1:Mm9::chr16:38800348..38800359,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=22268
|EntrezGene=22268
|HGNC=
|HGNC=
|MCL_coexpression_id=95
|TSSclassifier=NA
|UniProt=Q9Z2C6
|UniProt=Q9Z2C6
|association_with_transcript=-32bp_to_ENSMUST00000057767,NM_178924,uc007zfm.2_5end
|association_with_transcript=-32bp_to_ENSMUST00000057767,NM_178924,uc007zfm.2_5end
|cluster_id=chr16:38800348..38800359,-
|description=CAGE_peak_3_at_Upk1b_5end
|description=CAGE_peak_3_at_Upk1b_5end
|id=chr16:38800348..38800359,-
|id=chr16:38800348..38800359,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000464!3.37e-16!57;UBERON:0000466!1.20e-10!79;UBERON:0000926!1.54e-10!193;UBERON:0004120!1.54e-10!193;UBERON:0006603!1.54e-10!193;UBERON:0005178!5.60e-10!17;UBERON:0005181!5.60e-10!17;UBERON:0002224!5.60e-10!17;UBERON:0000915!5.60e-10!17;UBERON:0008947!5.60e-10!17;UBERON:0003258!5.60e-10!17;UBERON:0005177!9.01e-10!85;UBERON:0003886!4.22e-09!38;UBERON:0001048!5.02e-09!147;UBERON:0002100!6.59e-09!98;UBERON:0003103!7.75e-09!43;UBERON:0002553!1.63e-08!39;UBERON:0002323!1.72e-08!37;UBERON:0004458!1.72e-08!37;UBERON:0002048!5.58e-08!14;UBERON:0000117!5.58e-08!14;UBERON:0000171!5.58e-08!14;UBERON:0000170!5.58e-08!14;UBERON:0005597!5.58e-08!14;UBERON:0000118!5.58e-08!14;UBERON:0002075!1.77e-07!19;UBERON:0007100!2.05e-07!18;UBERON:0000948!2.05e-07!18;UBERON:0005498!2.05e-07!18;UBERON:0004140!2.05e-07!18;UBERON:0009881!2.05e-07!18;UBERON:0004141!2.05e-07!18;UBERON:0003084!2.05e-07!18;UBERON:0007005!2.05e-07!18;UBERON:0004139!2.05e-07!18;UBERON:0004291!2.05e-07!18;UBERON:0004872!2.17e-07!33;UBERON:0009569!4.44e-07!66;UBERON:0005153!8.30e-07!17
|ontology_enrichment_uberon=UBERON:0000464!3.37e-16!57;UBERON:0000466!1.20e-10!79;UBERON:0000926!1.54e-10!193;UBERON:0004120!1.54e-10!193;UBERON:0006603!1.54e-10!193;UBERON:0005178!5.60e-10!17;UBERON:0005181!5.60e-10!17;UBERON:0002224!5.60e-10!17;UBERON:0000915!5.60e-10!17;UBERON:0008947!5.60e-10!17;UBERON:0003258!5.60e-10!17;UBERON:0005177!9.01e-10!85;UBERON:0003886!4.22e-09!38;UBERON:0001048!5.02e-09!147;UBERON:0002100!6.59e-09!98;UBERON:0003103!7.75e-09!43;UBERON:0002553!1.63e-08!39;UBERON:0002323!1.72e-08!37;UBERON:0004458!1.72e-08!37;UBERON:0002048!5.58e-08!14;UBERON:0000117!5.58e-08!14;UBERON:0000171!5.58e-08!14;UBERON:0000170!5.58e-08!14;UBERON:0005597!5.58e-08!14;UBERON:0000118!5.58e-08!14;UBERON:0002075!1.77e-07!19;UBERON:0007100!2.05e-07!18;UBERON:0000948!2.05e-07!18;UBERON:0005498!2.05e-07!18;UBERON:0004140!2.05e-07!18;UBERON:0009881!2.05e-07!18;UBERON:0004141!2.05e-07!18;UBERON:0003084!2.05e-07!18;UBERON:0007005!2.05e-07!18;UBERON:0004139!2.05e-07!18;UBERON:0004291!2.05e-07!18;UBERON:0004872!2.17e-07!33;UBERON:0009569!4.44e-07!66;UBERON:0005153!8.30e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0005178,7.01e-14,17;UBERON:0005181,7.01e-14,17;UBERON:0002224,7.01e-14,17;UBERON:0000915,7.01e-14,17;UBERON:0008947,7.01e-14,17;UBERON:0003258,7.01e-14,17;UBERON:0002048,1.23e-10,14;UBERON:0000117,1.23e-10,14;UBERON:0000171,1.23e-10,14;UBERON:0000170,1.23e-10,14;UBERON:0005597,1.23e-10,14;UBERON:0000118,1.23e-10,14;UBERON:0005153,6.11e-10,17;UBERON:0001264,1.08e-09,12;UBERON:0003886,1.10e-09,38;UBERON:0002100,1.93e-09,90;UBERON:0005177,2.41e-09,79;UBERON:0002075,2.63e-09,19;UBERON:0002553,2.89e-09,39;UBERON:0003103,3.10e-09,43;UBERON:0007100,7.35e-09,18;UBERON:0000948,7.35e-09,18;UBERON:0005498,7.35e-09,18;UBERON:0004140,7.35e-09,18;UBERON:0009881,7.35e-09,18;UBERON:0004141,7.35e-09,18;UBERON:0003084,7.35e-09,18;UBERON:0007005,7.35e-09,18;UBERON:0004139,7.35e-09,18;UBERON:0004291,7.35e-09,18;UBERON:0002323,7.97e-09,37;UBERON:0004458,7.97e-09,37;UBERON:0005157,7.28e-08,20;UBERON:0004535,2.29e-07,23;UBERON:0001009,2.29e-07,23
|phase1_expression=0.160148847104794,0.697950815278722,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0.0992909512008853,0,0,0,0,0.430761996159075,0.430942465371778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,4.87106847895886,16.5015069528782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0,0.869593466105033,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,7.36069539438128,10.1343946190039,3.0331466700887,0.22836775943812,0,0,0.346970653532272,0,0.691846491768175,0.753613202763113,0.823120949949934,0.502666365318702,3.70792451601561,4.77177877835708,0.884610551949874,0,0,0,0,0,0,0,0.239630249011841,0,0,0,0,0,0,0,0.20778804455956,0,4.88828946481518,0.373220911830279,15.4160882644542,2.73574412652416,0,0.689706313300419,1.80062129805349,1.20563854268572,1.7009124787832,1.2811372028485,0.655912071918102,2.32833033665114,0.646703978798527,0.756424320671277,1.23165786914764,1.09597866213787,2.22437799380478,0.696504333044333,0,0.995171334092466,0,0,0,2.69263504296152,2.57978665979206,2.16074473753218,1.42046841351126,0.983821158737019,2.77680803197281,1.39520366850245,1.87791380979733,1.5179494507732,1.81015834904829,1.97000956894914,0.648550476366846,0.730999937126662,1.75640092232841,1.47627060636409,0.210289948564127,0,0,0,1.2797295032114,1.85789337488351,1.41754207454303,0,0.667134131534611,0.380451252225118,0,1.31759163779209,0.754005626400808,0.994782360205754,0.779856348476481,0,0.216138049874694,1.39398891278057,0.379335801906163,0.571242563048644,1.1270773567308,0.610953983535943,1.74557238450863,1.68325967736765,0.632365371242573,0.738050739898011,0.627994911365499,0.987177311374404,0,0.500535317148282,0,0,0.405720242777006,0,0.50925170356284,0.287696137450811,0.648540907100142,0,0,0.372140947668503,0.624075346229121,0.505157755894224,0.358794827043824,0,4.43407656399851,1.32643988239339,0.651859905768103,0.339490171550376,1.64283173801951,1.50755631697634,3.09456733151818,2.53673742215138,5.04432461139811,5.53661724121937,5.58091690301205,7.86543910635542,9.84304396635605,9.83613598354279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.83880170416537,3.91744328067962,6.35259141478947,1.48473110675282,1.32745138339963,1.45668381692989,1.209294227859,1.50884063804718,2.36241514304618,2.45948118355142,2.84271122485043,3.27180356529755,2.13898427030833,1.26414703174326,1.05418608574999,2.06271086496374,0,0.18006109403131,0.129358683782755,0,0,0,0.329098041204242,0,0.704015124191131,0.63549621259146,12.7906470871878,0.16488625294148,0.161464426695906,0.241251699712623,0.358117032009409,0.492422699235184,0.291480836629851,0.18542530201051,0.170870880797853,5.15967169908056,2.77791791054568,0.753473828018764,0.27338845544205,0.228778173206523,0,0,0,0,0.790839983952838,2.23651413839534,4.86024033698106,4.80903080833278,3.05707589244649,3.77620169877498,2.31429676030941,0.785267825952089,0.129614973291793,0,0,1.49516546043979,0.496375471371293,0.388902376688095,1.03327858782185,0.337912250981556,0.704143431874524,0.2604087696879,0.104859344425711,0,0,0.316011120628178,0,0,0.51968329191118,0,0,0,0.147689527174577,0.504832249740738,0,0,0,0,0.233753804363138,0,0,0,0,77.2758376128762,2.064507229963,0.549454872801795,0.857473516316263,11.034586288778,0,0,0,0,0,0.755393897389701,0.675022500231806,0,0,0,0,0.798049746802062,0.512200817262403,1.45864030240976,1.25767897576789,0.551530525350042,0.666740183404846,0.824140228955577,1.92551525755089,0.758091635291392,1.01391719956096,0.943131706930381,0.561849044819294,0.576226371643824,0.918967503289812,1.42888107384922,0.811190281613988,0.192909220463705,0,0.883193520806384,0.685738504770831,0.70990322463735,0.238436189947321,0.726732083161643,0.846984423737976,0.930760686808441,0.73171189149109,0.789209134313529,0.679020569229309,0.561142271657738,0.355905054372522,0.591026894253381,0,0.619747364743864,0.771626443924566,1.24905288968973,1.16965804222704,1.28922632428979,0.57386499620653,0,0.231867835620421
|phase1_expression=0.160148847104794,0.697950815278722,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0.0992909512008853,0,0,0,0,0.430761996159075,0.430942465371778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,4.87106847895886,16.5015069528782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0,0.869593466105033,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,7.36069539438128,10.1343946190039,3.0331466700887,0.22836775943812,0,0,0.346970653532272,0,0.691846491768175,0.753613202763113,0.823120949949934,0.502666365318702,3.70792451601561,4.77177877835708,0.884610551949874,0,0,0,0,0,0,0,0.239630249011841,0,0,0,0,0,0,0,0.20778804455956,0,4.88828946481518,0.373220911830279,15.4160882644542,2.73574412652416,0,0.689706313300419,1.80062129805349,1.20563854268572,1.7009124787832,1.2811372028485,0.655912071918102,2.32833033665114,0.646703978798527,0.756424320671277,1.23165786914764,1.09597866213787,2.22437799380478,0.696504333044333,0,0.995171334092466,0,0,0,2.69263504296152,2.57978665979206,2.16074473753218,1.42046841351126,0.983821158737019,2.77680803197281,1.39520366850245,1.87791380979733,1.5179494507732,1.81015834904829,1.97000956894914,0.648550476366846,0.730999937126662,1.75640092232841,1.47627060636409,0.210289948564127,0,0,0,1.2797295032114,1.85789337488351,1.41754207454303,0,0.667134131534611,0.380451252225118,0,1.31759163779209,0.754005626400808,0.994782360205754,0.779856348476481,0,0.216138049874694,1.39398891278057,0.379335801906163,0.571242563048644,1.1270773567308,0.610953983535943,1.74557238450863,1.68325967736765,0.632365371242573,0.738050739898011,0.627994911365499,0.987177311374404,0,0.500535317148282,0,0,0.405720242777006,0,0.50925170356284,0.287696137450811,0.648540907100142,0,0,0.372140947668503,0.624075346229121,0.505157755894224,0.358794827043824,0,4.43407656399851,1.32643988239339,0.651859905768103,0.339490171550376,1.64283173801951,1.50755631697634,3.09456733151818,2.53673742215138,5.04432461139811,5.53661724121937,5.58091690301205,7.86543910635542,9.84304396635605,9.83613598354279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.83880170416537,3.91744328067962,6.35259141478947,1.48473110675282,1.32745138339963,1.45668381692989,1.209294227859,1.50884063804718,2.36241514304618,2.45948118355142,2.84271122485043,3.27180356529755,2.13898427030833,1.26414703174326,1.05418608574999,2.06271086496374,0,0.18006109403131,0.129358683782755,0,0,0,0.329098041204242,0,0.704015124191131,0.63549621259146,12.7906470871878,0.16488625294148,0.161464426695906,0.241251699712623,0.358117032009409,0.492422699235184,0.291480836629851,0.18542530201051,0.170870880797853,5.15967169908056,2.77791791054568,0.753473828018764,0.27338845544205,0.228778173206523,0,0,0,0,0.790839983952838,2.23651413839534,4.86024033698106,4.80903080833278,3.05707589244649,3.77620169877498,2.31429676030941,0.785267825952089,0.129614973291793,0,0,1.49516546043979,0.496375471371293,0.388902376688095,1.03327858782185,0.337912250981556,0.704143431874524,0.2604087696879,0.104859344425711,0,0,0.316011120628178,0,0,0.51968329191118,0,0,0,0.147689527174577,0.504832249740738,0,0,0,0,0.233753804363138,0,0,0,0,77.2758376128762,2.064507229963,0.549454872801795,0.857473516316263,11.034586288778,0,0,0,0,0,0.755393897389701,0.675022500231806,0,0,0,0,0.798049746802062,0.512200817262403,1.45864030240976,1.25767897576789,0.551530525350042,0.666740183404846,0.824140228955577,1.92551525755089,0.758091635291392,1.01391719956096,0.943131706930381,0.561849044819294,0.576226371643824,0.918967503289812,1.42888107384922,0.811190281613988,0.192909220463705,0,0.883193520806384,0.685738504770831,0.70990322463735,0.238436189947321,0.726732083161643,0.846984423737976,0.930760686808441,0.73171189149109,0.789209134313529,0.679020569229309,0.561142271657738,0.355905054372522,0.591026894253381,0,0.619747364743864,0.771626443924566,1.24905288968973,1.16965804222704,1.28922632428979,0.57386499620653,0,0.231867835620421
|short_description=p3@Upk1b
|short_description=p3@Upk1b
}}
}}

Latest revision as of 00:12, 2 October 2015

Short description:p3@Upk1b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Upk1b_5end
Coexpression cluster:MCL_coexpression_mm9:95
Association with transcript: -32bp_to_ENSMUST00000057767, NM_178924, uc007zfm.2_5end
EntrezGene:Upk1b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Upk1b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C516.50
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G17.36
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G210.13
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A83.71
aorta, adult.CNhs10498.46-23H14.77
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.89
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B215.42
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.70
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.69
heart, embryo E12.CNhs11015.353-12F52.58
heart, embryo E13.CNhs11013.376-3I92.16
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C62.78
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E31.52
heart, neonate N03.CNhs11221.1349-25I21.81
heart, neonate N10.CNhs11118.749-24G11.97
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G71.68
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B14.43
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I63.09
lung, neonate N00.CNhs11224.640-42C62.54
lung, neonate N06.CNhs11212.683-20E55.04
lung, neonate N07.CNhs11111.715-19A35.54
lung, neonate N10.CNhs11219.750-23E65.58
lung, neonate N20.CNhs11109.822-18A47.87
lung, neonate N25.CNhs11119.1359-25C79.84
lung, neonate N30.CNhs11133.1394-42H29.84
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I72.84
ovary, embryo E18.CNhs11040.505-44H73.92
ovary, neonate N00.CNhs11217.1299-22I46.35
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F812.79
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C15.16
spleen, embryo E18.CNhs11011.1271-21F22.78
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D44.86
stomach, embryo E17.CNhs11006.1035-18D54.81
stomach, embryo E18.CNhs10999.1286-20C63.06
stomach, neonate N03.CNhs11193.1340-24B83.78
stomach, neonate N07.CNhs11210.718-18A92.31
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E477.28
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F811.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
thoracic cavity element7.01e-1417
thoracic segment organ7.01e-1417
thoracic cavity7.01e-1417
thoracic segment of trunk7.01e-1417
respiratory primordium7.01e-1417
endoderm of foregut7.01e-1417
lung1.23e-1014
respiratory tube1.23e-1014
respiration organ1.23e-1014
pair of lungs1.23e-1014
lung primordium1.23e-1014
lung bud1.23e-1014
epithelial bud6.11e-1017
pancreas1.08e-0912
body cavity precursor1.10e-0938
trunk1.93e-0990
trunk region element2.41e-0979
viscus2.63e-0919
anatomical cavity2.89e-0939
compound organ3.10e-0943
primary circulatory organ7.35e-0918
heart7.35e-0918
primitive heart tube7.35e-0918
primary heart field7.35e-0918
anterior lateral plate mesoderm7.35e-0918
heart tube7.35e-0918
heart primordium7.35e-0918
cardiac mesoderm7.35e-0918
cardiogenic plate7.35e-0918
heart rudiment7.35e-0918
body cavity7.97e-0937
body cavity or lining7.97e-0937
epithelial fold7.28e-0820
cardiovascular system2.29e-0723
circulatory system2.29e-0723
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr16:38800348..38800359,-&oldid=4329686"