Personal tools

FFCP PHASE1:Mm9::chrX:81321927..81321946,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=13405
|EntrezGene=13405
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-41bp_to_ENSMUST00000139998_5end
|association_with_transcript=-41bp_to_ENSMUST00000139998_5end
|cluster_id=chrX:81321927..81321946,+
|description=CAGE_peak_10_at_Dmd_5end
|description=CAGE_peak_10_at_Dmd_5end
|id=chrX:81321927..81321946,+
|id=chrX:81321927..81321946,+
|ontology_enrichment_celltype=CL:0000117!5.08e-13!23;CL:0000337!5.08e-13!23;CL:0000540!1.32e-09!33;CL:0000047!1.32e-09!33;CL:0000031!1.32e-09!33;CL:0000404!1.32e-09!33;CL:0000393!8.39e-07!39;CL:0000211!8.39e-07!39
|ontology_enrichment_celltype=CL:0000117!5.08e-13!23;CL:0000337!5.08e-13!23;CL:0000540!1.32e-09!33;CL:0000047!1.32e-09!33;CL:0000031!1.32e-09!33;CL:0000404!1.32e-09!33;CL:0000393!8.39e-07!39;CL:0000211!8.39e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,2.20e-12,23;CL:0000337,2.20e-12,23;CL:0000540,1.95e-07,33;CL:0000047,1.95e-07,33;CL:0000031,1.95e-07,33;CL:0000404,1.95e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!3.37e-26!63;UBERON:0003056!2.67e-22!49;UBERON:0001049!3.06e-22!52;UBERON:0005068!3.06e-22!52;UBERON:0006241!3.06e-22!52;UBERON:0007135!3.06e-22!52;UBERON:0002346!1.04e-21!71;UBERON:0003075!1.04e-21!71;UBERON:0007284!1.04e-21!71;UBERON:0000955!1.48e-21!50;UBERON:0006238!1.48e-21!50;UBERON:0001017!5.51e-21!73;UBERON:0005743!5.51e-21!73;UBERON:0002616!1.10e-20!49;UBERON:0000073!7.59e-20!75;UBERON:0001016!7.59e-20!75;UBERON:0004121!4.61e-19!102;UBERON:0000924!4.61e-19!102;UBERON:0006601!4.61e-19!102;UBERON:0003080!5.31e-17!40;UBERON:0002780!3.38e-16!39;UBERON:0001890!3.38e-16!39;UBERON:0006240!3.38e-16!39;UBERON:0002020!4.71e-15!34;UBERON:0000153!3.34e-14!94;UBERON:0007811!1.38e-13!86;UBERON:0002791!2.45e-12!29;UBERON:0003528!2.45e-12!29;UBERON:0001893!2.45e-12!29;UBERON:0000956!6.82e-08!21;UBERON:0001869!6.82e-08!21;UBERON:0000203!6.82e-08!21
|ontology_enrichment_uberon=UBERON:0000033!3.37e-26!63;UBERON:0003056!2.67e-22!49;UBERON:0001049!3.06e-22!52;UBERON:0005068!3.06e-22!52;UBERON:0006241!3.06e-22!52;UBERON:0007135!3.06e-22!52;UBERON:0002346!1.04e-21!71;UBERON:0003075!1.04e-21!71;UBERON:0007284!1.04e-21!71;UBERON:0000955!1.48e-21!50;UBERON:0006238!1.48e-21!50;UBERON:0001017!5.51e-21!73;UBERON:0005743!5.51e-21!73;UBERON:0002616!1.10e-20!49;UBERON:0000073!7.59e-20!75;UBERON:0001016!7.59e-20!75;UBERON:0004121!4.61e-19!102;UBERON:0000924!4.61e-19!102;UBERON:0006601!4.61e-19!102;UBERON:0003080!5.31e-17!40;UBERON:0002780!3.38e-16!39;UBERON:0001890!3.38e-16!39;UBERON:0006240!3.38e-16!39;UBERON:0002020!4.71e-15!34;UBERON:0000153!3.34e-14!94;UBERON:0007811!1.38e-13!86;UBERON:0002791!2.45e-12!29;UBERON:0003528!2.45e-12!29;UBERON:0001893!2.45e-12!29;UBERON:0000956!6.82e-08!21;UBERON:0001869!6.82e-08!21;UBERON:0000203!6.82e-08!21
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.00e-25,64;UBERON:0003075,2.00e-25,64;UBERON:0007284,2.00e-25,64;UBERON:0000073,7.94e-22,54;UBERON:0010371,5.47e-21,73;UBERON:0001049,9.37e-20,52;UBERON:0005068,9.37e-20,52;UBERON:0006241,9.37e-20,52;UBERON:0007135,9.37e-20,52;UBERON:0003056,9.88e-20,49;UBERON:0004121,2.89e-19,95;UBERON:0000924,2.89e-19,95;UBERON:0006601,2.89e-19,95;UBERON:0000955,1.28e-17,47;UBERON:0006238,1.28e-17,47;UBERON:0001017,2.64e-17,73;UBERON:0001016,1.38e-16,75;UBERON:0002616,2.03e-16,46;UBERON:0010314,1.62e-14,92;UBERON:0002020,5.19e-13,34;UBERON:0003080,6.31e-13,40;UBERON:0002780,7.29e-12,39;UBERON:0001890,7.29e-12,39;UBERON:0006240,7.29e-12,39;UBERON:0003528,1.03e-10,29;UBERON:0002791,1.03e-10,29;UBERON:0001893,1.03e-10,29;UBERON:0000970,1.41e-08,9;UBERON:0000019,1.41e-08,9;UBERON:0000047,1.41e-08,9;UBERON:0010312,1.41e-08,9;UBERON:0004088,1.41e-08,9;UBERON:0002104,1.41e-08,9;UBERON:0001456,1.41e-08,9;UBERON:0003072,1.41e-08,9;UBERON:0004128,1.41e-08,9;UBERON:0003071,1.41e-08,9;UBERON:0002420,5.39e-08,8;UBERON:0007245,5.39e-08,8;UBERON:0010009,5.39e-08,8;UBERON:0010011,5.39e-08,8;UBERON:0000454,5.39e-08,8;UBERON:0003076,6.39e-08,12;UBERON:0003057,6.39e-08,12;UBERON:0001444,9.17e-07,11
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,1.14058573539325,1.4850653216486,1.26194976810829,0.285650984403804,0.220868540951614,1.10241719293459,0.0958454710182364,0.919218786610021,1.10115880999389,1.27687338085188,1.38245879930619,0.395658863190582,1.00636407962651,2.08365348222704,1.11673199600552,1.12552522006336,1.98637722109853,2.35702868378934,5.26775218956681,1.67759501242771,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0,0,0.301445281105245,0,0,0,0,0,0,0.220841518460394,0,0,2.92780797011547,4.1889341362691,0,0,0,0,2.24685959107234,1.37250180845588,1.38219787324151,0.869121600961382,1.79000820131231,1.24672826735736,1.62241263067758,0.611036183101898,0,0,0,1.82168620147785,1.83921683546778,1.26043490863744,1.80845781402858,3.06164246180975,2.562274405697,2.81105173679186,0.776110112217047,0,1.13463648100692,0.879755620819744,0.219195732427575,0.834141747676794,0,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0,0,0,0,1.47202963994889,4.21908910755066,0,0,0.213288250535234,0,0.128867461322093,0,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,1.82797620175566,1.1270773567308,1.01825663922657,1.74557238450863,1.19230893813542,0.948548056863859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,1.60550589987792,2.22702204525186,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0.584511715822624,0,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,2.34079422240703,0.129358683782755,0.857348140126369,2.83744373827638,0.713475270408282,0.822745103010605,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,1.11255181206306,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0,0.432021363287205,0,0,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0.129159823477731,0,0.234714477291508,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.84130094602871,0.572895513439397,1.3748254587495,2.74033007908257,0,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0.62272408550506,1.19707462020309,0.853668028770671,1.21553358534147,0.209613162627982,0.367687016900028,0.44449345560323,0.206035057238894,1.28367683836726,1.76888048234658,1.01391719956096,0.754505365544305,1.21733959710847,1.08842759088278,0.402048282689293,2.38146845641537,1.0429589335037,0.964546102318525,0,0.441596760403192,0,0.354951612318675,1.66905332963125,0.145346416632329,1.2234219453993,0.592302255241736,0.73171189149109,0.526139422875686,1.35804113845862,0.561142271657738,0.355905054372522,0.886540341380071,0.409231043169689,1.23949472948773,0.771626443924566,0.499621155875892,0.233931608445408,0.429742108096597,0.57386499620653,0,0
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,1.14058573539325,1.4850653216486,1.26194976810829,0.285650984403804,0.220868540951614,1.10241719293459,0.0958454710182364,0.919218786610021,1.10115880999389,1.27687338085188,1.38245879930619,0.395658863190582,1.00636407962651,2.08365348222704,1.11673199600552,1.12552522006336,1.98637722109853,2.35702868378934,5.26775218956681,1.67759501242771,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0,0,0.301445281105245,0,0,0,0,0,0,0.220841518460394,0,0,2.92780797011547,4.1889341362691,0,0,0,0,2.24685959107234,1.37250180845588,1.38219787324151,0.869121600961382,1.79000820131231,1.24672826735736,1.62241263067758,0.611036183101898,0,0,0,1.82168620147785,1.83921683546778,1.26043490863744,1.80845781402858,3.06164246180975,2.562274405697,2.81105173679186,0.776110112217047,0,1.13463648100692,0.879755620819744,0.219195732427575,0.834141747676794,0,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0,0,0,0,1.47202963994889,4.21908910755066,0,0,0.213288250535234,0,0.128867461322093,0,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,1.82797620175566,1.1270773567308,1.01825663922657,1.74557238450863,1.19230893813542,0.948548056863859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,1.60550589987792,2.22702204525186,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0.584511715822624,0,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,2.34079422240703,0.129358683782755,0.857348140126369,2.83744373827638,0.713475270408282,0.822745103010605,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,1.11255181206306,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0,0.432021363287205,0,0,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0.129159823477731,0,0.234714477291508,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.84130094602871,0.572895513439397,1.3748254587495,2.74033007908257,0,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0.62272408550506,1.19707462020309,0.853668028770671,1.21553358534147,0.209613162627982,0.367687016900028,0.44449345560323,0.206035057238894,1.28367683836726,1.76888048234658,1.01391719956096,0.754505365544305,1.21733959710847,1.08842759088278,0.402048282689293,2.38146845641537,1.0429589335037,0.964546102318525,0,0.441596760403192,0,0.354951612318675,1.66905332963125,0.145346416632329,1.2234219453993,0.592302255241736,0.73171189149109,0.526139422875686,1.35804113845862,0.561142271657738,0.355905054372522,0.886540341380071,0.409231043169689,1.23949472948773,0.771626443924566,0.499621155875892,0.233931608445408,0.429742108096597,0.57386499620653,0,0
|short_description=p10@Dmd
|short_description=p10@Dmd
}}
}}

Latest revision as of 00:41, 2 October 2015

Short description:p10@Dmd
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_10_at_Dmd_5end
Coexpression cluster:NA
Association with transcript: -41bp_to_ENSMUST00000139998_5end
EntrezGene:Dmd
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p10@Dmd

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I24.19
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C61.82
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C63.06
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G82.81
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G14.22
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F81.83
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G71.19
kidney, neonate N10.CNhs11206.758-6D50.95
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.61
medulla oblongata, neonate N30.CNhs11200.1396-42A32.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E62.34
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B92.84
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.20e-1223
neuroblast (sensu Vertebrata)2.20e-1223
neuron1.95e-0733
neuronal stem cell1.95e-0733
neuroblast1.95e-0733
electrically signaling cell1.95e-0733

Uber anatomy
Ontology termp-valuen
neurectoderm2.00e-2564
neural plate2.00e-2564
presumptive neural plate2.00e-2564
regional part of nervous system7.94e-2254
ecto-epithelium5.47e-2173
neural tube9.37e-2052
neural rod9.37e-2052
future spinal cord9.37e-2052
neural keel9.37e-2052
pre-chordal neural plate9.88e-2049
ectoderm-derived structure2.89e-1995
ectoderm2.89e-1995
presumptive ectoderm2.89e-1995
brain1.28e-1747
future brain1.28e-1747
central nervous system2.64e-1773
nervous system1.38e-1675
regional part of brain2.03e-1646
structure with developmental contribution from neural crest1.62e-1492
gray matter5.19e-1334
anterior neural tube6.31e-1340
regional part of forebrain7.29e-1239
forebrain7.29e-1239
future forebrain7.29e-1239
brain grey matter1.03e-1029
regional part of telencephalon1.03e-1029
telencephalon1.03e-1029
eye1.41e-089
camera-type eye1.41e-089
simple eye1.41e-089
immature eye1.41e-089
ocular region1.41e-089
visual system1.41e-089
face1.41e-089
optic cup1.41e-089
optic vesicle1.41e-089
eye primordium1.41e-089
basal ganglion5.39e-088
nuclear complex of neuraxis5.39e-088
aggregate regional part of brain5.39e-088
collection of basal ganglia5.39e-088
cerebral subcortex5.39e-088
posterior neural tube6.39e-0812
chordal neural plate6.39e-0812
subdivision of head9.17e-0711
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chrX:81321927..81321946,%2B&oldid=4330724"