Template:FFCP others

CAGE_peaks_ID:	{{{cage_peaks_id}}}
Chr:	{{{chromosome}}}
Start:	{{{start}}}
End:	{{{end}}}
Score:	{{{score}}}
Strand:	{{{strand}}}
Ensembl_transcript_id:	{{{ensembl_transcript_id}}}
Ensembl_gene_id:	{{{ensembl_gene_id}}}
Augustus_gene_name:	{{{augustus_gene_name}}}
RefSeq_transcript_id:	{{{refseq_transcript_id}}}
Genscan_gene_name:	{{{genscan_gene_name}}}
EST_gene_name:	{{{est_gene_name}}}

View on UCSC genome browser

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Mouse over to see Genome browser image, Click image to go to Genome browser

CAGE Expression

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• Click each plot point to find sample in table

Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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Cell type

Ontology term	p-value	n

Uber anatomy

Ontology term	p-value	n

Disease

Ontology term	p-value	n

"FFCP others" is not a number.

Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Property "Cage peaks id" (as page type) with input value "{{{cage_peaks_id}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Property "Start" (as page type) with input value "{{{start}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "End" (as page type) with input value "{{{end}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "Score" (as page type) with input value "{{{score}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Property "Ensembl transcript id" (as page type) with input value "{{{ensembl_transcript_id}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "Ensembl gene id" (as page type) with input value "{{{ensembl_gene_id}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "Ensembl gene name" (as page type) with input value "{{{ensembl_gene_name}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "Augustus gene name" (as page type) with input value "{{{augustus_gene_name}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "Refseq transcript id" (as page type) with input value "{{{refseq_transcript_id}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "Genscan gene name" (as page type) with input value "{{{genscan_gene_name}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "Est gene name" (as page type) with input value "{{{est_gene_name}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "Aldb lincRNA" (as page type) with input value "{{{aldb_lincRNA}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "Noncode" (as page type) with input value "{{{noncode}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.