FF:10061-101H7: Difference between revisions
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{{f5samples | {{f5samples | ||
|DRA_sample_Accession=CAGE@SAMD00004925 | |||
|accession_numbers=CAGE;DRX008744;DRR009616;DRZ001041;DRZ002426;DRZ012391;DRZ013776 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0000341,UBERON:0000974,UBERON:0000479,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0001062,UBERON:0000153,UBERON:0007811 | |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0000341,UBERON:0000974,UBERON:0000479,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0001062,UBERON:0000153,UBERON:0007811 | ||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000999,FF:0000004,FF:0010061 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr2:114036488..114036504,-!p1@PAX8!2.15!140.22!PAX8;;chr9:100615499..100615519,+!p1@FOXE1!2.13!134.03!FOXE1;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.82!65.71!PEG3;;chr15:42749722..42749739,-!p2@ZFP106!1.77!101.89!ZFP106;;chr19:46801639..46801699,+!p1@HIF3A!1.77!57.85!HIF3A;;chr1:203055129..203055147,-!p1@MYOG!1.77!57.85!MYOG;;chr20:62680984..62680999,-!p1@SOX18!1.67!59.99!SOX18;;chr1:201979703..201979721,+!p2@ELF3!1.66!45.23!ELF3;;chr19:46800289..46800327,+!p2@HIF3A!1.66!44.52!HIF3A;;chr11:34642612..34642646,+!p1@EHF!1.65!44.04!EHF;;chr8:25902876..25902936,-!p1@EBF2!1.65!43.57!EBF2;;chr6:19837592..19837621,+!p1@ID4!1.62!237.59!ID4;;chr2:122042770..122042785,-!p1@TFCP2L1!1.60!38.80!TFCP2L1;;chr4:57547454..57547469,-!p1@HOPX!1.59!38.33!HOPX;;chr17:53342311..53342400,+!p1@HLF!1.57!40.95!HLF;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.57!35.95!ZBED1;;chr1:214161272..214161322,+!p1@PROX1!1.53!46.18!PROX1;;chr10:94449703..94449718,+!p1@HHEX!1.52!121.17!HHEX;;chr10:131762504..131762555,-!p1@EBF3!1.49!29.76!EBF3;;chr1:40105299..40105326,-!p1@HEYL!1.48!29.28!HEYL;;chr8:10588010..10588030,-!p1@SOX7!1.47!28.33!SOX7;;chr2:19558373..19558392,-!p1@OSR1!1.44!70.47!OSR1;;chr1:201979743..201979762,+!p1@ELF3!1.44!26.66!ELF3;;chr5:158526917..158526932,-!p1@EBF1!1.42!61.66!EBF1;;chr12:52437488..52437507,+!p2@NR4A1!1.42!25.23!NR4A1;;chr21:39870339..39870443,-!p1@ERG!1.38!22.85!ERG;;chr7:15726296..15726315,-!p1@MEOX2!1.37!22.62!MEOX2;;chr20:50179368..50179392,-!p2@NFATC2!1.36!28.33!NFATC2;;chr17:74137321..74137337,-!p1@FOXJ1!1.35!21.43!FOXJ1;;chr8:102504651..102504683,+!p1@GRHL2!1.34!20.71!GRHL2;;chr1:170632285..170632309,+!p1@PRRX1!1.33!22.85!PRRX1;;chr5:133451294..133451310,+!p2@TCF7!1.31!19.28!TCF7;;chr16:79634624..79634642,-!p1@MAF!1.29!72.13!MAF;;chr19:2867325..2867348,+!p1@ZNF556!1.29!18.33!ZNF556;;chr6:1312325..1312340,+!p1@FOXQ1!1.28!29.28!FOXQ1;;chr8:106330656..106330684,+!p1@ZFPM2!1.25!43.33!ZFPM2;;chr7:113726357..113726443,+!p1@FOXP2!1.25!28.81!FOXP2;;chr22:19748231..19748317,+!p1@TBX1!1.25!16.66!TBX1;;chr5:134369879..134369898,-!p2@PITX1!1.24!16.19!PITX1;;chr11:113930425..113930471,+!p1@ZBTB16!1.23!23.09!ZBTB16;;chr12:96588368..96588394,+!p3@ELK3!1.22!41.42!ELK3;;chr20:51588873..51588953,+!p1@TSHZ2!1.20!19.52!TSHZ2;;chr6:28321971..28321995,-!p1@ZNF323!1.20!15.00!ZNF323;;chr12:81110684..81110700,+!p1@MYF5!1.20!14.76!MYF5;;chr18:22932080..22932170,-!p1@ZNF521!1.19!60.71!ZNF521;;chr16:79634595..79634620,-!p2@MAF!1.19!26.19!MAF;;chr17:80797886..80797906,-!p1@ZNF750!1.18!14.05!ZNF750;;chr3:114819124..114819200,-!p3@ZBTB20!1.17!32.14!ZBTB20;;chr5:158527104..158527135,-!p4@EBF1!1.17!13.81!EBF1;;chr1:61548225..61548299,+!p1@NFIA!1.16!175.69!NFIA;;chr1:209979467..209979494,-!p1@IRF6!1.16!15.24!IRF6;;chr1:61548374..61548415,+!p4@NFIA!1.15!24.52!NFIA;;chr2:145277882..145277967,-!p3@ZEB2!1.14!21.90!ZEB2;;chr15:57511609..57511651,+!p2@TCF12!1.14!21.66!TCF12;;chr18:53068911..53068935,-!p4@TCF4!1.14!14.52!TCF4;;chr1:170633348..170633399,+!p2@PRRX1!1.13!16.90!PRRX1;;chr14:36990416..36990438,-!p4@NKX2-1!1.13!12.62!NKX2-1;;chr14:61116183..61116208,-!p1@SIX1!1.12!45.95!SIX1;;chr12:115122005..115122016,-!p3@TBX3!1.12!14.52!TBX3;;chr6:144329384..144329405,-!p1@PLAGL1!1.11!136.65!PLAGL1;;chr7:19157248..19157268,-!p1@TWIST1!1.10!32.61!TWIST1;;chr2:60780753..60780800,-!p1@BCL11A!1.09!55.95!BCL11A;;chr1:61547894..61547968,+!p2@NFIA!1.08!32.14!NFIA;;chr1:151804244..151804310,-!p1@RORC!1.08!10.95!RORC;;chr20:30433396..30433414,-!p1@FOXS1!1.08!10.95!FOXS1;;chr12:81101404..81101421,+!p1@MYF6!1.08!10.95!MYF6;;chr17:1959369..1959388,+!p2@HIC1!1.06!28.09!HIC1;;chr1:61548069..61548102,+!p3@NFIA!1.06!25.71!NFIA;;chr19:20278043..20278054,+!p2@ZNF486!1.06!10.47!ZNF486;;chr16:51185318..51185348,-!p2@SALL1!1.05!10.24!SALL1;;chr22:31739291..31739311,-!p2@PATZ1!1.05!10.24!PATZ1;;chr5:2751762..2751784,-!p1@IRX2!1.05!10.24!IRX2;;chr11:125034640..125034655,+!p1@PKNOX2!1.05!10.24!PKNOX2;;chr1:164528410..164528428,+!p1@PBX1!1.04!74.99!PBX1;;chr1:170633262..170633285,+!p3@PRRX1!1.04!11.43!PRRX1;;chr22:38380543..38380569,-!p1@SOX10!1.04!10.00!SOX10;;chr11:16629261..16629284,-!p1@SOX6!1.04!10.00!SOX6;;chr4:174451370..174451387,-!p1@HAND2!1.03!9.76!HAND2;;chr3:12330560..12330579,+!p1@PPARG!1.02!10.95!PPARG;;chr11:128457446..128457461,-!p4@ETS1!1.02!9.52!ETS1;;chr12:81101472..81101483,+!p2@MYF6!1.02!9.52!MYF6;;chr7:15726243..15726293,-!p2@MEOX2!1.02!9.52!MEOX2;;chr5:88178983..88179012,-!p1@MEF2C!1.01!73.32!MEF2C;;chr15:96873984..96873999,+!p3@NR2F2!1.01!69.51!NR2F2;;chr2:166326200..166326216,+!p1@CSRNP3!1.01!13.57!CSRNP3;;chr14:37131058..37131139,+!p1@PAX9!1.01!9.28!PAX9;;chrX:591524..591527,+!p1@SHOX!1.00!9.05!SHOX;;chr4:149363494..149363543,-!p1@NR3C2!1.00!9.05!NR3C2;;chr12:115121962..115121987,-!p1@TBX3!0.99!74.99!TBX3;;chr10:70320074..70320106,+!p1@TET1!0.99!18.09!TET1;;chr13:72441315..72441454,-!p1@DACH1!0.98!17.38!DACH1;;chr3:169381420..169381535,-!p1@MECOM!0.98!10.00!MECOM;;chr2:24714729..24714761,+!p1@NCOA1!0.98!8.57!NCOA1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| |expression_enrichment_score=chr2:114036488..114036504,-!p1@PAX8!2.15!140.22!PAX8;;chr9:100615499..100615519,+!p1@FOXE1!2.13!134.03!FOXE1;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.82!65.71!PEG3;;chr15:42749722..42749739,-!p2@ZFP106!1.77!101.89!ZFP106;;chr19:46801639..46801699,+!p1@HIF3A!1.77!57.85!HIF3A;;chr1:203055129..203055147,-!p1@MYOG!1.77!57.85!MYOG;;chr20:62680984..62680999,-!p1@SOX18!1.67!59.99!SOX18;;chr1:201979703..201979721,+!p2@ELF3!1.66!45.23!ELF3;;chr19:46800289..46800327,+!p2@HIF3A!1.66!44.52!HIF3A;;chr11:34642612..34642646,+!p1@EHF!1.65!44.04!EHF;;chr8:25902876..25902936,-!p1@EBF2!1.65!43.57!EBF2;;chr6:19837592..19837621,+!p1@ID4!1.62!237.59!ID4;;chr2:122042770..122042785,-!p1@TFCP2L1!1.60!38.80!TFCP2L1;;chr4:57547454..57547469,-!p1@HOPX!1.59!38.33!HOPX;;chr17:53342311..53342400,+!p1@HLF!1.57!40.95!HLF;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.57!35.95!ZBED1;;chr1:214161272..214161322,+!p1@PROX1!1.53!46.18!PROX1;;chr10:94449703..94449718,+!p1@HHEX!1.52!121.17!HHEX;;chr10:131762504..131762555,-!p1@EBF3!1.49!29.76!EBF3;;chr1:40105299..40105326,-!p1@HEYL!1.48!29.28!HEYL;;chr8:10588010..10588030,-!p1@SOX7!1.47!28.33!SOX7;;chr2:19558373..19558392,-!p1@OSR1!1.44!70.47!OSR1;;chr1:201979743..201979762,+!p1@ELF3!1.44!26.66!ELF3;;chr5:158526917..158526932,-!p1@EBF1!1.42!61.66!EBF1;;chr12:52437488..52437507,+!p2@NR4A1!1.42!25.23!NR4A1;;chr21:39870339..39870443,-!p1@ERG!1.38!22.85!ERG;;chr7:15726296..15726315,-!p1@MEOX2!1.37!22.62!MEOX2;;chr20:50179368..50179392,-!p2@NFATC2!1.36!28.33!NFATC2;;chr17:74137321..74137337,-!p1@FOXJ1!1.35!21.43!FOXJ1;;chr8:102504651..102504683,+!p1@GRHL2!1.34!20.71!GRHL2;;chr1:170632285..170632309,+!p1@PRRX1!1.33!22.85!PRRX1;;chr5:133451294..133451310,+!p2@TCF7!1.31!19.28!TCF7;;chr16:79634624..79634642,-!p1@MAF!1.29!72.13!MAF;;chr19:2867325..2867348,+!p1@ZNF556!1.29!18.33!ZNF556;;chr6:1312325..1312340,+!p1@FOXQ1!1.28!29.28!FOXQ1;;chr8:106330656..106330684,+!p1@ZFPM2!1.25!43.33!ZFPM2;;chr7:113726357..113726443,+!p1@FOXP2!1.25!28.81!FOXP2;;chr22:19748231..19748317,+!p1@TBX1!1.25!16.66!TBX1;;chr5:134369879..134369898,-!p2@PITX1!1.24!16.19!PITX1;;chr11:113930425..113930471,+!p1@ZBTB16!1.23!23.09!ZBTB16;;chr12:96588368..96588394,+!p3@ELK3!1.22!41.42!ELK3;;chr20:51588873..51588953,+!p1@TSHZ2!1.20!19.52!TSHZ2;;chr6:28321971..28321995,-!p1@ZNF323!1.20!15.00!ZNF323;;chr12:81110684..81110700,+!p1@MYF5!1.20!14.76!MYF5;;chr18:22932080..22932170,-!p1@ZNF521!1.19!60.71!ZNF521;;chr16:79634595..79634620,-!p2@MAF!1.19!26.19!MAF;;chr17:80797886..80797906,-!p1@ZNF750!1.18!14.05!ZNF750;;chr3:114819124..114819200,-!p3@ZBTB20!1.17!32.14!ZBTB20;;chr5:158527104..158527135,-!p4@EBF1!1.17!13.81!EBF1;;chr1:61548225..61548299,+!p1@NFIA!1.16!175.69!NFIA;;chr1:209979467..209979494,-!p1@IRF6!1.16!15.24!IRF6;;chr1:61548374..61548415,+!p4@NFIA!1.15!24.52!NFIA;;chr2:145277882..145277967,-!p3@ZEB2!1.14!21.90!ZEB2;;chr15:57511609..57511651,+!p2@TCF12!1.14!21.66!TCF12;;chr18:53068911..53068935,-!p4@TCF4!1.14!14.52!TCF4;;chr1:170633348..170633399,+!p2@PRRX1!1.13!16.90!PRRX1;;chr14:36990416..36990438,-!p4@NKX2-1!1.13!12.62!NKX2-1;;chr14:61116183..61116208,-!p1@SIX1!1.12!45.95!SIX1;;chr12:115122005..115122016,-!p3@TBX3!1.12!14.52!TBX3;;chr6:144329384..144329405,-!p1@PLAGL1!1.11!136.65!PLAGL1;;chr7:19157248..19157268,-!p1@TWIST1!1.10!32.61!TWIST1;;chr2:60780753..60780800,-!p1@BCL11A!1.09!55.95!BCL11A;;chr1:61547894..61547968,+!p2@NFIA!1.08!32.14!NFIA;;chr1:151804244..151804310,-!p1@RORC!1.08!10.95!RORC;;chr20:30433396..30433414,-!p1@FOXS1!1.08!10.95!FOXS1;;chr12:81101404..81101421,+!p1@MYF6!1.08!10.95!MYF6;;chr17:1959369..1959388,+!p2@HIC1!1.06!28.09!HIC1;;chr1:61548069..61548102,+!p3@NFIA!1.06!25.71!NFIA;;chr19:20278043..20278054,+!p2@ZNF486!1.06!10.47!ZNF486;;chr16:51185318..51185348,-!p2@SALL1!1.05!10.24!SALL1;;chr22:31739291..31739311,-!p2@PATZ1!1.05!10.24!PATZ1;;chr5:2751762..2751784,-!p1@IRX2!1.05!10.24!IRX2;;chr11:125034640..125034655,+!p1@PKNOX2!1.05!10.24!PKNOX2;;chr1:164528410..164528428,+!p1@PBX1!1.04!74.99!PBX1;;chr1:170633262..170633285,+!p3@PRRX1!1.04!11.43!PRRX1;;chr22:38380543..38380569,-!p1@SOX10!1.04!10.00!SOX10;;chr11:16629261..16629284,-!p1@SOX6!1.04!10.00!SOX6;;chr4:174451370..174451387,-!p1@HAND2!1.03!9.76!HAND2;;chr3:12330560..12330579,+!p1@PPARG!1.02!10.95!PPARG;;chr11:128457446..128457461,-!p4@ETS1!1.02!9.52!ETS1;;chr12:81101472..81101483,+!p2@MYF6!1.02!9.52!MYF6;;chr7:15726243..15726293,-!p2@MEOX2!1.02!9.52!MEOX2;;chr5:88178983..88179012,-!p1@MEF2C!1.01!73.32!MEF2C;;chr15:96873984..96873999,+!p3@NR2F2!1.01!69.51!NR2F2;;chr2:166326200..166326216,+!p1@CSRNP3!1.01!13.57!CSRNP3;;chr14:37131058..37131139,+!p1@PAX9!1.01!9.28!PAX9;;chrX:591524..591527,+!p1@SHOX!1.00!9.05!SHOX;;chr4:149363494..149363543,-!p1@NR3C2!1.00!9.05!NR3C2;;chr12:115121962..115121987,-!p1@TBX3!0.99!74.99!TBX3;;chr10:70320074..70320106,+!p1@TET1!0.99!18.09!TET1;;chr13:72441315..72441454,-!p1@DACH1!0.98!17.38!DACH1;;chr3:169381420..169381535,-!p1@MECOM!0.98!10.00!MECOM;;chr2:24714729..24714761,+!p1@NCOA1!0.98!8.57!NCOA1;;chr3:181429704..181429722,+!p1@SOX2!0.98!8.57!SOX2;;chr16:1031762..1031781,+!p1@SOX8!0.98!8.57!SOX8;;chr18:45935720..45935772,-!p1@ZBTB7C!0.98!8.57!ZBTB7C;;chrX:84498989..84499003,+!p1@ZNF711!0.97!11.67!ZNF711;;chr1:61547405..61547434,+!p11@NFIA!0.97!8.33!NFIA;;chr7:27142290..27142310,-!p1@HOXA2!0.97!8.33!HOXA2;;chr8:55370487..55370503,+!p1@SOX17!0.97!8.33!SOX17;;chr17:6926362..6926377,+!p1@BCL6B!0.97!8.33!BCL6B;;chr9:14314131..14314147,-!p2@NFIB!0.96!46.18!NFIB;;chr1:170699295..170699343,+!p35@PRRX1!0.96!8.09!PRRX1;;chr19:33793430..33793447,-!p1@CEBPA!0.95!34.76!CEBPA;;chrX:131623044..131623089,-!p1@MBNL3!0.95!34.04!MBNL3;;chr15:61521417..61521460,-!p2@RORA!0.95!18.09!RORA;;chr20:2673383..2673441,+!p1@EBF4!0.95!12.86!EBF4;;chr1:170632959..170632987,+!p4@PRRX1!0.95!8.81!PRRX1;;chr14:29235961..29236008,+!p1@FOXG1!0.95!7.86!FOXG1;;chr5:71803177..71803255,-!p1@ZNF366!0.95!7.86!ZNF366;;chr7:88389004..88389019,+!p1@ZNF804B!0.95!7.86!ZNF804B;;chr3:111314186..111314204,-!p1@ZBED2!0.95!7.86!ZBED2;;chr3:114866084..114866118,-!p2@ZBTB20!0.94!29.04!ZBTB20;;chr15:57210961..57211012,+!p3@TCF12!0.94!25.23!TCF12;;chr3:18486354..18486377,-!p2@SATB1!0.94!9.76!SATB1;;chr16:51185172..51185197,-!p1@SALL1!0.94!7.62!SALL1;;chr6:28321909..28321965,-!p3@ZNF323!0.94!7.62!ZNF323;;chr16:86544113..86544145,+!p1@FOXF1!0.93!9.52!FOXF1;;chr9:14314522..14314556,-!p3@NFIB!0.92!17.85!NFIB;;chr18:52989031..52989079,-!p2@TCF4!0.92!17.62!TCF4;;chr12:54785074..54785122,-!p2@ZNF385A!0.92!11.43!ZNF385A;;chr8:106330696..106330719,+!p2@ZFPM2!0.92!9.52!ZFPM2;;chr5:50679228..50679288,+!p1@ISL1!0.92!7.38!ISL1;;chr6:34524093..34524135,-!p1@SPDEF!0.92!7.38!SPDEF;;chr7:100065686..100065701,-!p2@TSC22D4!0.92!7.38!TSC22D4;;chr1:217251619..217251658,-!p6@ESRRG!0.92!7.38!ESRRG;;chr2:5832508..5832524,+!p1@SOX11!0.92!7.38!SOX11;;chr4:109090075..109090095,-!p2@LEF1!0.92!7.38!LEF1;;chr11:129245526..129245553,+!p1@BARX2!0.92!7.38!BARX2;;chr1:2461692..2461710,-!p1@HES5!0.91!7.14!HES5;;chr9:100616439..100616476,+!p3@FOXE1!0.91!7.14!FOXE1;;chr6:134210243..134210257,+!p1@TCF21!0.90!6.90!TCF21;;chr1:170632683..170632696,+!p12@PRRX1!0.90!6.90!PRRX1;;chr12:52445218..52445237,+!p1@NR4A1!0.89!89.75!NR4A1;;chr14:21994337..21994442,-!p1@SALL2!0.89!19.28!SALL2;;chr6:144289132..144289134,-!p3@PLAGL1!0.89!16.19!PLAGL1;;chr5:124084493..124084524,-!p2@ZNF608!0.89!15.71!ZNF608;;chr16:79633894..79633954,-!p3@MAF!0.89!13.57!MAF;;chr5:134369905..134369972,-!p1@PITX1!0.89!10.71!PITX1;;chr6:1389789..1389821,+!p1@FOXF2!0.88!9.28!FOXF2;;chr9:1050331..1050363,+!p1@DMRT2!0.88!6.67!DMRT2;;chr11:16627528..16627550,-!p7@SOX6!0.88!6.67!SOX6;;chr4:109087445..109087463,-!p1@LEF1!0.88!6.67!LEF1;;chr9:14314566..14314618,-!p1@NFIB!0.87!81.18!NFIB;;chr19:58220517..58220583,-!p1@ZNF154!0.87!21.43!ZNF154;;chr3:21792585..21792625,-!p2@ZNF385D!0.87!7.14!ZNF385D;;chr20:51589133..51589159,+!p2@TSHZ2!0.87!6.43!TSHZ2;;chr14:38064429..38064486,-!p1@FOXA1!0.87!6.43!FOXA1;;chrX:101186981..101187030,-!p1@ZMAT1!0.86!21.66!ZMAT1;;chr12:24715376..24715432,-!p1@SOX5!0.86!8.09!SOX5;;chr7:27153454..27153469,-!p2@HOXA3!0.86!6.19!HOXA3;;chr2:242556880..242556899,-!p5@THAP4!0.86!6.19!THAP4;;chr3:114819101..114819121,-!p7@ZBTB20!0.86!6.19!ZBTB20;;chr3:189507432..189507459,+!p1@TP63!0.86!6.19!TP63;;chr3:25470156..25470227,+!p2@RARB!0.86!6.19!RARB;;chr4:57522598..57522664,-!p3@HOPX!0.86!6.19!HOPX;;chr1:216978721..216978728,-!p13@ESRRG!0.86!6.19!ESRRG;;chr16:85932760..85932775,+!p1@IRF8!0.86!6.19!IRF8;;chr7:28448965..28448994,+!p2@CREB5!0.85!22.38!CREB5;;chr2:66662281..66662308,+!p1@MEIS1!0.85!22.38!MEIS1;;chr8:99956662..99956684,+!p1@OSR2!0.85!9.52!OSR2;;chr14:33408072..33408114,+!p2@NPAS3!0.85!7.38!NPAS3;;chr3:18466787..18466839,-!p1@SATB1!0.84!27.85!SATB1;;chrX:107018969..107019024,-!p6@TSC22D3!0.84!8.33!TSC22D3;;chr20:55204351..55204377,+!p1@TFAP2C!0.84!7.62!TFAP2C;;chr6:126070769..126070801,+!p1@HEY2!0.84!6.90!HEY2;;chr19:57183114..57183145,-!p1@ZNF835!0.84!6.67!ZNF835;;chr21:44441260..44441273,+!p3@PKNOX1!0.84!5.95!PKNOX1;;chr16:79634581..79634592,-!p4@MAF!0.84!5.95!MAF;;chr13:72441074..72441172,-!p2@DACH1!0.84!5.95!DACH1;;chr2:43453734..43453751,-!p1@ZFP36L2!0.83!652.77!ZFP36L2;;chr5:88179195..88179224,-!p3@MEF2C!0.83!9.52!MEF2C;;chr7:27170359..27170381,-!p1@HOXA4!0.83!5.71!HOXA4;;chr8:93107451..93107468,-!p2@RUNX1T1!0.83!5.71!RUNX1T1;;chr8:93115274..93115323,-!p4@RUNX1T1!0.83!5.71!RUNX1T1;;chr2:45236540..45236577,-!p1@SIX2!0.83!5.71!SIX2;;chr1:119530493..119530572,-!p1@TBX15!0.83!5.71!TBX15;;chr1:170632477..170632506,+!p6@PRRX1!0.83!5.71!PRRX1;;chr12:26277956..26277980,-!p1@BHLHE41!0.82!21.43!BHLHE41;;chr1:23696308..23696339,-!p2@ZNF436!0.82!12.62!ZNF436;;chr3:42947600..42947680,+!p1@ZNF662!0.82!8.33!ZNF662;;chr9:77112244..77112262,+!p1@RORB!0.82!6.43!RORB;;chr2:145277640..145277771,-!p1@ZEB2!0.81!79.51!ZEB2;;chr18:42260059..42260132,+!p1@SETBP1!0.81!9.52!SETBP1;;chr17:41739283..41739297,-!p1@MEOX1!0.81!5.48!MEOX1;;chr1:170632723..170632739,+!p8@PRRX1!0.81!5.48!PRRX1;;chr1:209979411..209979433,-!p2@IRF6!0.81!5.48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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000341 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/throat%252c%2520fetal%252c%2520donor1.CNhs11770.10061-101H7.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/throat%252c%2520fetal%252c%2520donor1.CNhs11770.10061-101H7.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/throat%252c%2520fetal%252c%2520donor1.CNhs11770.10061-101H7.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/throat%252c%2520fetal%252c%2520donor1.CNhs11770.10061-101H7.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/throat%252c%2520fetal%252c%2520donor1.CNhs11770.10061-101H7.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10061-101H7 | |id=FF:10061-101H7 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0010061 | ||
|is_obsolete= | |||
|library_id=CNhs11770 | |||
|library_id_phase_based=2:CNhs11770 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10061 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10061 | |||
|name=throat, fetal, donor1 | |name=throat, fetal, donor1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11770,LSID820,release009,COMPLETED | |profile_hcage=CNhs11770,LSID820,release009,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0.0463716234329315,0,0,0.98092643819162,0,-0.160318030086386,0.092743246865863,-0.0433023403039134,0.633067421888761,0,0,0,0.092743246865863,0,0,0,0,0,0.092743246865863,0,0,0,0.272610600234812,0,0,0,0.084562136065824,0.169124272131648,0.644234776123826,0,0,0.609236082613022,0,0,0,0,0,0,0.0463716234329315,0,0,0,0.092743246865863,0,-0.00826525205369142,0.292285921270514,0,0,0,0,0,0,0,0.0685282257530287,0,0.092743246865863,0,0.234059791889601,0.234059791889601,0.177107097529025,0.169124272131648,0.432007118805573,0,0,-0.00460038034723392,0.169124272131648,0,0,0,0,0,0,0,0.092743246865863,0,0,0.0463716234329315,0,0,0,0,0.092743246865863,0.0873005880844235,0,0,0.169124272131648,0.0452073821653649,0,0.155406142068504,0.207947983806595,0.424195758476827,0,0.092743246865863,0.0427137397762714,0.0660236462376105,0,0.092743246865863,0.084562136065824,0,0.242472645271862,0.329227601413012,0,0,0,0,0,0,0.169124272131648,0,0,0,0,0,0,0,0,0.092743246865863,0,0.182903221111705,0.092743246865863,0,0,-0.0266094859650764,-0.306307393518869,0.169124272131648,0,0.169124272131648,0,0,0 | |||
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| |||
|rna_box=101 | |rna_box=101 | ||
|rna_catalog_number=Cat:RtHFN: Throat | |rna_catalog_number=Cat:RtHFN: Throat | ||
Line 57: | Line 78: | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|sample_age= | |sample_age= | ||
|sample_category=tissues | |||
|sample_cell_catalog=NA | |sample_cell_catalog=NA | ||
|sample_cell_line= | |sample_cell_line= | ||
Line 77: | Line 99: | ||
|sample_tissue=throat | |sample_tissue=throat | ||
|top_motifs=MEF2{A,B,C,D}:4.15116208778;ZNF384:3.91640936039;MYBL2:3.09895486916;HOX{A4,D4}:2.79698051754;SPZ1:2.58302879695;TGIF1:2.49203911724;SOX5:2.3343367086;MAZ:2.32883940431;IKZF2:2.29592656067;TAL1_TCF{3,4,12}:2.25636778738;HMGA1,2:2.13100996522;TBP:2.0858957283;PAX6:1.98704983596;HIC1:1.94559210094;GCM1,2:1.94526767579;POU3F1..4:1.90997601167;ZIC1..3:1.90072237726;LMO2:1.79146145848;CDC5L:1.77590019315;PAX5:1.77057916247;KLF4:1.7332640335;BPTF:1.6176458952;PATZ1:1.60519473547;RFX2..5_RFXANK_RFXAP:1.58618990389;MYOD1:1.57861284823;FOXP1:1.55831619468;MZF1:1.54143816735;RBPJ:1.520956569;NR5A1,2:1.50755890299;NKX6-1,2:1.50096531339;SP1:1.49583781116;PRDM1:1.46904314798;CDX1,2,4:1.46802542399;NKX2-3_NKX2-5:1.46220991139;TFAP2{A,C}:1.46108325652;FOXL1:1.44970094048;SMAD1..7,9:1.43342469515;FOXP3:1.42883231177;SNAI1..3:1.42091915791;MED-1{core}:1.419713458;FOXO1,3,4:1.38884041134;ESR1:1.37596929805;NR1H4:1.36300744738;VSX1,2:1.3350921463;NHLH1,2:1.31024142676;GLI1..3:1.24365770219;RFX1:1.24157551856;IKZF1:1.21958177719;SRF:1.19743740569;EP300:1.19064824687;TLX2:1.18014303675;TFAP2B:1.1557015509;GATA4:1.15326433847;GTF2I:1.1245911936;NR6A1:1.11256643031;NKX2-1,4:1.10729770233;NFATC1..3:1.10613096558;TEAD1:1.10217403215;RREB1:1.10047143325;TBX4,5:1.09896714734;EGR1..3:1.08894714299;XBP1:1.07193771986;TFAP4:1.06290321644;MTF1:1.05666865116;MTE{core}:1.03654086589;TLX1..3_NFIC{dimer}:1.01401794188;ALX1:1.00642315658;POU6F1:0.995917831195;GFI1B:0.981641095091;XCPE1{core}:0.955755896784;ZBTB16:0.942904579334;FOXD3:0.939265694946;SOX{8,9,10}:0.934947749866;GFI1:0.933940244573;CUX2:0.927193470179;TFCP2:0.919638988237;FOXN1:0.917684431086;ZEB1:0.900610765337;HMX1:0.892609252424;BREu{core}:0.846493900584;SOX2:0.834194771233;NFIX:0.825280335197;FOX{D1,D2}:0.814914652354;POU1F1:0.790730778634;NR3C1:0.789698758813;ZFP161:0.783893718381;ATF2:0.753163054284;POU5F1:0.752889303363;RORA:0.748929426224;GTF2A1,2:0.735293804859;NKX3-1:0.710703414531;LHX3,4:0.692939312091;HOX{A6,A7,B6,B7}:0.692816422233;NANOG{mouse}:0.68926704999;RXRA_VDR{dimer}:0.680609733007;MYFfamily:0.651411181257;FOXA2:0.631857455649;UFEwm:0.598338359674;HSF1,2:0.572364051032;AIRE:0.568621579759;TOPORS:0.542431477844;ZNF238:0.542293359511;FOXM1:0.54149989643;REST:0.533974456093;PBX1:0.470333874238;ZNF423:0.461406768841;FOXQ1:0.440732335365;SOX17:0.431926474273;NKX3-2:0.428326067934;DBP:0.421474321036;ZNF143:0.375200565382;TEF:0.294572297682;HBP1_HMGB_SSRP1_UBTF:0.294037821104;STAT1,3:0.289757661432;ZNF148:0.221363341695;PAX3,7:0.198899069452;ATF6:0.159979321929;NFY{A,B,C}:0.143391484916;YY1:0.135148682872;HAND1,2:0.113918986068;ARID5B:0.0979431644466;IRF7:0.0912956500984;NRF1:0.079870231066;STAT5{A,B}:0.06780926698;ALX4:0.0672587119971;GZF1:0.0670373962903;PITX1..3:0.0594139788839;EVI1:0.0543236657771;E2F1..5:-0.0138855277834;AR:-0.0322523968682;IRF1,2:-0.0347482944509;OCT4_SOX2{dimer}:-0.0354710669325;ONECUT1,2:-0.0370579123759;RXR{A,B,G}:-0.0517352507717;LEF1_TCF7_TCF7L1,2:-0.0551477998538;TP53:-0.0620913498787;PRRX1,2:-0.0867211201429;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.102684257242;ETS1,2:-0.13551743164;DMAP1_NCOR{1,2}_SMARC:-0.160869531248;GATA6:-0.165892574563;FOX{I1,J2}:-0.18930991981;ELF1,2,4:-0.195848866134;SREBF1,2:-0.200663968515;JUN:-0.212402757687;EN1,2:-0.242976898318;PAX4:-0.267026870616;STAT2,4,6:-0.274845304378;EBF1:-0.290379949466;ZBTB6:-0.298624269686;SPI1:-0.310690083592;NANOG:-0.387502008982;FOX{F1,F2,J1}:-0.392627161659;MAFB:-0.3938737986;PDX1:-0.395688279111;T:-0.396018905278;HNF4A_NR2F1,2:-0.401989353436;PAX1,9:-0.408006600711;ESRRA:-0.417271465132;TFDP1:-0.428639822483;SPIB:-0.430665781317;HES1:-0.442353454778;CREB1:-0.484174811206;PAX2:-0.538620110541;HNF1A:-0.578098933297;CRX:-0.595134267791;ATF4:-0.626901716712;NKX2-2,8:-0.63530178169;NFIL3:-0.645084983141;NFE2L1:-0.649883360488;HIF1A:-0.666528918339;ADNP_IRX_SIX_ZHX:-0.673748679085;HOXA9_MEIS1:-0.695080871277;NFKB1_REL_RELA:-0.730098403681;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.736412958037;RUNX1..3:-0.764353502169;HLF:-0.824084378297;FOSL2:-0.833818730169;ELK1,4_GABP{A,B1}:-0.871936788394;AHR_ARNT_ARNT2:-0.909418202468;FOS_FOS{B,L1}_JUN{B,D}:-1.0506927738;ATF5_CREB3:-1.05841964027;MYB:-1.06150266035;POU2F1..3:-1.10632421351;HOX{A5,B5}:-1.12465260136;BACH2:-1.14873482176;NFE2:-1.15819177442;CEBPA,B_DDIT3:-1.16860224223;NFE2L2:-1.44998330922;PAX8:-1.51231357873;bHLH_family:-1.66149427794;PPARG:-1.68436384075 | |top_motifs=MEF2{A,B,C,D}:4.15116208778;ZNF384:3.91640936039;MYBL2:3.09895486916;HOX{A4,D4}:2.79698051754;SPZ1:2.58302879695;TGIF1:2.49203911724;SOX5:2.3343367086;MAZ:2.32883940431;IKZF2:2.29592656067;TAL1_TCF{3,4,12}:2.25636778738;HMGA1,2:2.13100996522;TBP:2.0858957283;PAX6:1.98704983596;HIC1:1.94559210094;GCM1,2:1.94526767579;POU3F1..4:1.90997601167;ZIC1..3:1.90072237726;LMO2:1.79146145848;CDC5L:1.77590019315;PAX5:1.77057916247;KLF4:1.7332640335;BPTF:1.6176458952;PATZ1:1.60519473547;RFX2..5_RFXANK_RFXAP:1.58618990389;MYOD1:1.57861284823;FOXP1:1.55831619468;MZF1:1.54143816735;RBPJ:1.520956569;NR5A1,2:1.50755890299;NKX6-1,2:1.50096531339;SP1:1.49583781116;PRDM1:1.46904314798;CDX1,2,4:1.46802542399;NKX2-3_NKX2-5:1.46220991139;TFAP2{A,C}:1.46108325652;FOXL1:1.44970094048;SMAD1..7,9:1.43342469515;FOXP3:1.42883231177;SNAI1..3:1.42091915791;MED-1{core}:1.419713458;FOXO1,3,4:1.38884041134;ESR1:1.37596929805;NR1H4:1.36300744738;VSX1,2:1.3350921463;NHLH1,2:1.31024142676;GLI1..3:1.24365770219;RFX1:1.24157551856;IKZF1:1.21958177719;SRF:1.19743740569;EP300:1.19064824687;TLX2:1.18014303675;TFAP2B:1.1557015509;GATA4:1.15326433847;GTF2I:1.1245911936;NR6A1:1.11256643031;NKX2-1,4:1.10729770233;NFATC1..3:1.10613096558;TEAD1:1.10217403215;RREB1:1.10047143325;TBX4,5:1.09896714734;EGR1..3:1.08894714299;XBP1:1.07193771986;TFAP4:1.06290321644;MTF1:1.05666865116;MTE{core}:1.03654086589;TLX1..3_NFIC{dimer}:1.01401794188;ALX1:1.00642315658;POU6F1:0.995917831195;GFI1B:0.981641095091;XCPE1{core}:0.955755896784;ZBTB16:0.942904579334;FOXD3:0.939265694946;SOX{8,9,10}:0.934947749866;GFI1:0.933940244573;CUX2:0.927193470179;TFCP2:0.919638988237;FOXN1:0.917684431086;ZEB1:0.900610765337;HMX1:0.892609252424;BREu{core}:0.846493900584;SOX2:0.834194771233;NFIX:0.825280335197;FOX{D1,D2}:0.814914652354;POU1F1:0.790730778634;NR3C1:0.789698758813;ZFP161:0.783893718381;ATF2:0.753163054284;POU5F1:0.752889303363;RORA:0.748929426224;GTF2A1,2:0.735293804859;NKX3-1:0.710703414531;LHX3,4:0.692939312091;HOX{A6,A7,B6,B7}:0.692816422233;NANOG{mouse}:0.68926704999;RXRA_VDR{dimer}:0.680609733007;MYFfamily:0.651411181257;FOXA2:0.631857455649;UFEwm:0.598338359674;HSF1,2:0.572364051032;AIRE:0.568621579759;TOPORS:0.542431477844;ZNF238:0.542293359511;FOXM1:0.54149989643;REST:0.533974456093;PBX1:0.470333874238;ZNF423:0.461406768841;FOXQ1:0.440732335365;SOX17:0.431926474273;NKX3-2:0.428326067934;DBP:0.421474321036;ZNF143:0.375200565382;TEF:0.294572297682;HBP1_HMGB_SSRP1_UBTF:0.294037821104;STAT1,3:0.289757661432;ZNF148:0.221363341695;PAX3,7:0.198899069452;ATF6:0.159979321929;NFY{A,B,C}:0.143391484916;YY1:0.135148682872;HAND1,2:0.113918986068;ARID5B:0.0979431644466;IRF7:0.0912956500984;NRF1:0.079870231066;STAT5{A,B}:0.06780926698;ALX4:0.0672587119971;GZF1:0.0670373962903;PITX1..3:0.0594139788839;EVI1:0.0543236657771;E2F1..5:-0.0138855277834;AR:-0.0322523968682;IRF1,2:-0.0347482944509;OCT4_SOX2{dimer}:-0.0354710669325;ONECUT1,2:-0.0370579123759;RXR{A,B,G}:-0.0517352507717;LEF1_TCF7_TCF7L1,2:-0.0551477998538;TP53:-0.0620913498787;PRRX1,2:-0.0867211201429;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.102684257242;ETS1,2:-0.13551743164;DMAP1_NCOR{1,2}_SMARC:-0.160869531248;GATA6:-0.165892574563;FOX{I1,J2}:-0.18930991981;ELF1,2,4:-0.195848866134;SREBF1,2:-0.200663968515;JUN:-0.212402757687;EN1,2:-0.242976898318;PAX4:-0.267026870616;STAT2,4,6:-0.274845304378;EBF1:-0.290379949466;ZBTB6:-0.298624269686;SPI1:-0.310690083592;NANOG:-0.387502008982;FOX{F1,F2,J1}:-0.392627161659;MAFB:-0.3938737986;PDX1:-0.395688279111;T:-0.396018905278;HNF4A_NR2F1,2:-0.401989353436;PAX1,9:-0.408006600711;ESRRA:-0.417271465132;TFDP1:-0.428639822483;SPIB:-0.430665781317;HES1:-0.442353454778;CREB1:-0.484174811206;PAX2:-0.538620110541;HNF1A:-0.578098933297;CRX:-0.595134267791;ATF4:-0.626901716712;NKX2-2,8:-0.63530178169;NFIL3:-0.645084983141;NFE2L1:-0.649883360488;HIF1A:-0.666528918339;ADNP_IRX_SIX_ZHX:-0.673748679085;HOXA9_MEIS1:-0.695080871277;NFKB1_REL_RELA:-0.730098403681;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.736412958037;RUNX1..3:-0.764353502169;HLF:-0.824084378297;FOSL2:-0.833818730169;ELK1,4_GABP{A,B1}:-0.871936788394;AHR_ARNT_ARNT2:-0.909418202468;FOS_FOS{B,L1}_JUN{B,D}:-1.0506927738;ATF5_CREB3:-1.05841964027;MYB:-1.06150266035;POU2F1..3:-1.10632421351;HOX{A5,B5}:-1.12465260136;BACH2:-1.14873482176;NFE2:-1.15819177442;CEBPA,B_DDIT3:-1.16860224223;NFE2L2:-1.44998330922;PAX8:-1.51231357873;bHLH_family:-1.66149427794;PPARG:-1.68436384075 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10061-101H7;search_select_hide=table117:FF:10061-101H7 | |||
}} | }} |
Latest revision as of 12:18, 3 June 2020
Name: | throat, fetal, donor1 |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs11770 |
Sample type: | tissues |
Genomic View: | UCSC |
RefEX: | Specific genes |
FANTOM CAT: | 1 |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11770
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11770
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.0546 |
10 | 10 | 0.0476 |
100 | 100 | 0.408 |
101 | 101 | 0.772 |
102 | 102 | 0.577 |
103 | 103 | 0.0595 |
104 | 104 | 0.551 |
105 | 105 | 0.764 |
106 | 106 | 0.16 |
107 | 107 | 0.978 |
108 | 108 | 0.935 |
109 | 109 | 0.00253 |
11 | 11 | 0.0694 |
110 | 110 | 0.166 |
111 | 111 | 0.0604 |
112 | 112 | 0.737 |
113 | 113 | 0.0199 |
114 | 114 | 0.00247 |
115 | 115 | 0.43 |
116 | 116 | 0.86 |
117 | 117 | 0.0147 |
118 | 118 | 0.0467 |
119 | 119 | 0.242 |
12 | 12 | 0.426 |
120 | 120 | 0.248 |
121 | 121 | 0.9 |
122 | 122 | 0.112 |
123 | 123 | 0.139 |
124 | 124 | 0.19 |
125 | 125 | 0.302 |
126 | 126 | 0.672 |
127 | 127 | 0.126 |
128 | 128 | 0.534 |
129 | 129 | 0.674 |
13 | 13 | 0.215 |
130 | 130 | 0.798 |
131 | 131 | 0.568 |
132 | 132 | 0.0795 |
133 | 133 | 0.302 |
134 | 134 | 0.472 |
135 | 135 | 0.47 |
136 | 136 | 0.325 |
137 | 137 | 0.502 |
138 | 138 | 0.452 |
139 | 139 | 0.137 |
14 | 14 | 0.737 |
140 | 140 | 0.652 |
141 | 141 | 0.273 |
142 | 142 | 0.287 |
143 | 143 | 1.3921e-4 |
144 | 144 | 0.85 |
145 | 145 | 0.663 |
146 | 146 | 0.472 |
147 | 147 | 0.315 |
148 | 148 | 0.0574 |
149 | 149 | 0.658 |
15 | 15 | 0.0563 |
150 | 150 | 0.42 |
151 | 151 | 0.477 |
152 | 152 | 0.46 |
153 | 153 | 0.606 |
154 | 154 | 0.809 |
155 | 155 | 0.164 |
156 | 156 | 0.626 |
157 | 157 | 0.804 |
158 | 158 | 0.414 |
159 | 159 | 0.81 |
16 | 16 | 0.315 |
160 | 160 | 0.522 |
161 | 161 | 0.373 |
162 | 162 | 0.262 |
163 | 163 | 0.0399 |
164 | 164 | 0.208 |
165 | 165 | 0.605 |
166 | 166 | 0.251 |
167 | 167 | 0.0861 |
168 | 168 | 0.829 |
169 | 169 | 0.0117 |
17 | 17 | 0.123 |
18 | 18 | 0.00571 |
19 | 19 | 0.777 |
2 | 2 | 0.713 |
20 | 20 | 0.139 |
21 | 21 | 0.484 |
22 | 22 | 0.367 |
23 | 23 | 0.576 |
24 | 24 | 0.188 |
25 | 25 | 0.61 |
26 | 26 | 0.0202 |
27 | 27 | 0.619 |
28 | 28 | 0.551 |
29 | 29 | 0.0435 |
3 | 3 | 0.126 |
30 | 30 | 0.194 |
31 | 31 | 0.736 |
32 | 32 | 0.191 |
33 | 33 | 0.292 |
34 | 34 | 0.783 |
35 | 35 | 0.183 |
36 | 36 | 0.0186 |
37 | 37 | 0.0358 |
38 | 38 | 0.31 |
39 | 39 | 0.734 |
4 | 4 | 0.717 |
40 | 40 | 0.0643 |
41 | 41 | 0.104 |
42 | 42 | 0.204 |
43 | 43 | 0.047 |
44 | 44 | 0.811 |
45 | 45 | 0.903 |
46 | 46 | 0.0722 |
47 | 47 | 0.0424 |
48 | 48 | 0.108 |
49 | 49 | 0.0495 |
5 | 5 | 0.331 |
50 | 50 | 0.889 |
51 | 51 | 0.345 |
52 | 52 | 0.915 |
53 | 53 | 0.733 |
54 | 54 | 0.382 |
55 | 55 | 0.333 |
56 | 56 | 0.446 |
57 | 57 | 0.265 |
58 | 58 | 0.323 |
59 | 59 | 0.167 |
6 | 6 | 0.759 |
60 | 60 | 0.526 |
61 | 61 | 0.13 |
62 | 62 | 0.22 |
63 | 63 | 0.484 |
64 | 64 | 0.222 |
65 | 65 | 0.28 |
66 | 66 | 0.0545 |
67 | 67 | 0.415 |
68 | 68 | 0.787 |
69 | 69 | 0.841 |
7 | 7 | 0.623 |
70 | 70 | 0.0325 |
71 | 71 | 0.0191 |
72 | 72 | 0.158 |
73 | 73 | 0.102 |
74 | 74 | 0.468 |
75 | 75 | 0.0152 |
76 | 76 | 0.125 |
77 | 77 | 0.509 |
78 | 78 | 0.0989 |
79 | 79 | 0.649 |
8 | 8 | 0.0904 |
80 | 80 | 0.896 |
81 | 81 | 0.404 |
82 | 82 | 0.314 |
83 | 83 | 0.473 |
84 | 84 | 0.781 |
85 | 85 | 0.336 |
86 | 86 | 0.176 |
87 | 87 | 0.00227 |
88 | 88 | 0.78 |
89 | 89 | 0.526 |
9 | 9 | 0.8 |
90 | 90 | 0.0868 |
91 | 91 | 0.673 |
92 | 92 | 0.376 |
93 | 93 | 0.974 |
94 | 94 | 0.0446 |
95 | 95 | 0.00647 |
96 | 96 | 0.277 |
97 | 97 | 0.965 |
98 | 98 | 0.117 |
99 | 99 | 0.55 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11770
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0010061 human throat - fetal sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0000341 (throat)
0000974 (neck)
0000479 (tissue)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)
0000153 (anterior region of body)
0007811 (craniocervical region)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000999 (fetal tissue sample)
0000004 (tissue sample)
0010061 (human throat - fetal sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA