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{{f5samples
{{f5samples
|id=FF:10076-102A4
|DRA_sample_Accession=CAGE@SAMD00004850
|name=occipital lobe, adult, donor1
|accession_numbers=CAGE;DRX008692;DRR009564;DRZ000989;DRZ002374;DRZ012339;DRZ013724
|sample_id=10076
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000955,UBERON:0002021,UBERON:0000956,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0000073,UBERON:0000477,UBERON:0003528,UBERON:0002791,UBERON:0000467,UBERON:0002619,UBERON:0001062,UBERON:0000480,UBERON:0002616,UBERON:0002780,UBERON:0002020,UBERON:0010317,UBERON:0001017,UBERON:0001016,UBERON:0001869,UBERON:0001893,UBERON:0001890,UBERON:0000203,UBERON:0001950
|rna_tube_id=102A4
|rna_box=102
|rna_position=A4
|sample_cell_lot=NA
|sample_cell_catalog=NA
|sample_company=Biochain
|rna_lot_number=A505663
|rna_catalog_number=Cat:RtpHAN: Brain
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=27 years old adult
|sample_tissue=occipital lobe
|sample_donor(cell lot)=1
|sample_sex=male
|sample_age=
|sample_ethnicity=A?
|rna_rin=7.2
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=normal
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_weight_ug=50
|rna_concentration=2.7
|sample_note=
|profile_hcage=CNhs11787,LSID820,release009,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=
|ancestors_in_cell_lineage_facet=
|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000033,UBERON:0000061,UBERON:0000062,UBERON:0000064,UBERON:0000073,UBERON:0000153,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000477,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0000955,UBERON:0000956,UBERON:0001016,UBERON:0001017,UBERON:0001049,UBERON:0001062,UBERON:0001869,UBERON:0001890,UBERON:0001893,UBERON:0001950,UBERON:0002021,UBERON:0002050,UBERON:0002346,UBERON:0002532,UBERON:0002616,UBERON:0002619,UBERON:0002780,UBERON:0002791,UBERON:0003056,UBERON:0003075,UBERON:0003080,UBERON:0004121,UBERON:0005068,UBERON:0005291,UBERON:0005423,UBERON:0005743,UBERON:0006598,UBERON:0007023,UBERON:0007135,UBERON:0007284
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010076
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr7:100065686..100065701,-!p2@TSC22D4!2.72!526.53!TSC22D4;;chr21:34442439..34442455,+!p1@OLIG1!2.38!241.01!OLIG1;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!2.30!199.58!PEG3;;chr9:77112244..77112262,+!p1@RORB!2.28!212.30!RORB;;chr17:53342311..53342400,+!p1@HLF!2.08!136.40!HLF;;chr15:80735246..80735321,+!p3@ARNT2!1.95!88.82!ARNT2;;chr21:34398234..34398250,+!p1@OLIG2!1.94!86.15!OLIG2;;chr11:61520075..61520136,+!p1@C11orf9!1.91!165.73!C11orf9;;chr2:95963052..95963106,+!p1@KCNIP3!1.89!76.71!KCNIP3;;chrX:25034067..25034088,-!p1@ARX!1.88!74.25!ARX;;chr9:114287433..114287513,+!p1@ZNF483!1.87!181.12!ZNF483;;chr22:38380543..38380569,-!p1@SOX10!1.86!71.38!SOX10;;chr4:57547454..57547469,-!p1@HOPX!1.86!71.38!HOPX;;chr15:80733570..80733659,+!p2@ARNT2!1.81!63.59!ARNT2;;chr2:162272785..162272836,+!p1@TBR1!1.81!63.38!TBR1;;chr2:145277882..145277967,-!p3@ZEB2!1.78!98.87!ZEB2;;chr2:2334997..2335053,-!p1@MYT1L!1.78!58.66!MYT1L;;chr5:88178983..88179012,-!p1@MEF2C!1.76!416.59!MEF2C;;chr4:81118647..81118666,+!p1@PRDM8!1.75!72.41!PRDM8;;chr10:64134120..64134183,+!p1@ZNF365!1.75!65.84!ZNF365;;chr17:37764128..37764258,-!p1@NEUROD2!1.75!55.38!NEUROD2;;chr21:34442540..34442560,+!p2@OLIG1!1.71!50.66!OLIG1;;chr8:40755333..40755352,-!p1@ZMAT4!1.71!50.05!ZMAT4;;chr10:48355030..48355090,+!p1@ZNF488!1.70!62.36!ZNF488;;chr19:13135582..13135600,+!p3@NFIX!1.69!48.20!NFIX;;chr3:181429704..181429722,+!p1@SOX2!1.69!47.79!SOX2;;chr14:29235961..29236008,+!p1@FOXG1!1.68!46.97!FOXG1;;chr2:60781201..60781258,-!p3@BCL11A!1.64!42.66!BCL11A;;chr11:8102846..8102892,+!p1@TUB!1.63!57.02!TUB;;chr18:53070846..53070902,-!p6@TCF4!1.63!41.23!TCF4;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.60!38.97!POU3F3;;chr15:80696703..80696754,+!p1@ARNT2!1.59!49.43!ARNT2;;chr8:53322304..53322340,-!p1@ST18!1.57!36.31!ST18;;chr4:57522166..57522260,-!p2@HOPX!1.54!38.97!HOPX;;chr17:38821373..38821440,-!p1@KRT222,p2@SMARCE1!1.53!33.02!SMARCE1;;chr5:88179017..88179046,-!p2@MEF2C!1.51!122.45!MEF2C;;chr2:95963120..95963136,+!p2@KCNIP3!1.51!31.18!KCNIP3;;chr16:1031762..1031781,+!p1@SOX8!1.47!28.51!SOX8;;chr19:13135386..13135435,+!p4@NFIX!1.46!27.90!NFIX;;chr2:73520667..73520683,-!p1@EGR4!1.43!26.05!EGR4;;chr12:54779511..54779577,-!p5@ZNF385A!1.42!25.02!ZNF385A;;chr12:26277817..26277863,-!p2@BHLHE41!1.41!33.23!BHLHE41;;chr2:166326200..166326216,+!p1@CSRNP3!1.40!35.07!CSRNP3;;chr7:31380292..31380351,-!p1@NEUROD6!1.40!24.00!NEUROD6;;chr2:60780753..60780800,-!p1@BCL11A!1.39!111.99!BCL11A;;chr11:113930425..113930471,+!p1@ZBTB16!1.39!33.64!ZBTB16;;chr14:29234581..29234601,+!p2@FOXG1!1.39!23.79!FOXG1;;chr12:106976774..106976788,+!p1@RFX4!1.38!22.97!RFX4;;chr19:38720294..38720348,-!p1@DPF1!1.37!28.10!DPF1;;chr1:2461692..2461710,-!p1@HES5!1.37!22.56!HES5;;chr9:77112225..77112238,+!p2@RORB!1.37!22.36!RORB;;chr10:134599649..134599653,-!p1@NKX6-2!1.37!22.36!NKX6-2;;chr9:126774018..126774055,+!p1@LHX2!1.36!21.74!LHX2;;chr1:214161272..214161322,+!p1@PROX1!1.35!30.15!PROX1;;chr19:57352109..57352153,-!p2@ZIM2!1.33!20.31!ZIM2;;chr11:125034640..125034655,+!p1@PKNOX2!1.32!19.90!PKNOX2;;chr8:53322347..53322378,-!p2@ST18!1.32!19.69!ST18;;chr12:106976678..106976708,+!p2@RFX4!1.30!18.87!RFX4;;chr19:46801639..46801699,+!p1@HIF3A!1.30!18.87!HIF3A;;chr3:181429741..181429767,+!p2@SOX2!1.28!18.26!SOX2;;chr14:33403881..33403924,+!p1@NPAS3!1.28!18.05!NPAS3;;chr12:103351444..103351461,+!p1@ASCL1!1.28!17.85!ASCL1;;chr2:239148671..239148686,-!p1@HES6!1.27!64.20!HES6;;chr8:145560111..145560165,-!p2@SCRT1!1.27!17.64!SCRT1;;chr19:13135566..13135577,+!p9@NFIX!1.26!17.23!NFIX;;chr11:8102819..8102845,+!p3@TUB!1.24!20.31!TUB;;chr10:119302232..119302265,+!p1@EMX2!1.24!16.20!EMX2;;chr12:26277956..26277980,-!p1@BHLHE41!1.23!57.23!BHLHE41;;chr3:24536253..24536328,-!p1@THRB!1.22!29.13!THRB;;chr6:126112039..126112062,+!p8@NCOA7!1.22!18.87!NCOA7;;chr2:60780607..60780624,-!p2@BCL11A!1.21!46.36!BCL11A;;chr22:41763452..41763466,+!p2@TEF!1.21!15.18!TEF;;chrY:21906594..21906622,-!p1@KDM5D!1.19!14.56!KDM5D;;chr10:64134045..64134083,+!p3@ZNF365!1.19!14.36!ZNF365;;chr20:62680984..62680999,-!p1@SOX18!1.18!18.67!SOX18;;chr2:162272889..162272915,+!p2@TBR1!1.18!14.15!TBR1;;chr8:22550530..22550609,-!p2@EGR3!1.18!14.15!EGR3;;chr1:151032860..151032918,+!p1@MLLT11!1.16!156.71!MLLT11;;chr17:7492684..7492778,-!p2@SOX15!1.16!28.10!SOX15;;chr12:54785074..54785122,-!p2@ZNF385A!1.16!20.92!ZNF385A;;chr3:21792682..21792720,-!p1@ZNF385D!1.16!13.54!ZNF385D;;chrX:85969626..85969664,+!p1@DACH2!1.16!13.54!DACH2;;chr8:145560371..145560449,-!p1@SCRT1!1.16!13.33!SCRT1;;chr2:162272716..162272753,+!p3@TBR1!1.16!13.33!TBR1;;chr19:58545454..58545498,+!p1@ZSCAN1!1.15!13.13!ZSCAN1;;chrX:118739835..118739862,-!p1@NKRF!1.14!13.95!NKRF;;chr4:57522598..57522664,-!p3@HOPX!1.14!12.92!HOPX;;chr2:2335070..2335098,-!p4@MYT1L!1.13!12.51!MYT1L;;chr14:29236269..29236285,+!p3@FOXG1!1.12!12.31!FOXG1;;chr6:15401104..15401166,+!p5@JARID2!1.12!12.31!JARID2;;chr19:13135731..13135787,+!p10@NFIX!1.12!12.10!NFIX;;chr19:38085768..38085821,+!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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000955;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000956;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001016;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001890;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001893;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002021;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003528
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006601,UBERON:0010316
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 66: Line 41:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/occipital%2520lobe%252c%2520adult%252c%2520donor1.CNhs11787.10076-102A4.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/occipital%2520lobe%252c%2520adult%252c%2520donor1.CNhs11787.10076-102A4.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/occipital%2520lobe%252c%2520adult%252c%2520donor1.CNhs11787.10076-102A4.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/occipital%2520lobe%252c%2520adult%252c%2520donor1.CNhs11787.10076-102A4.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/occipital%2520lobe%252c%2520adult%252c%2520donor1.CNhs11787.10076-102A4.hg38.nobarcode.ctss.bed.gz
|id=FF:10076-102A4
|is_a=EFO:0002091;;FF:0010076
|is_obsolete=
|library_id=CNhs11787
|library_id_phase_based=2:CNhs11787
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10076
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10076
|name=occipital lobe, adult, donor1
|namespace=FANTOM5
|part_of=
|profile_cagescan=,,,
|profile_hcage=CNhs11787,LSID820,release009,COMPLETED
|profile_rnaseq=
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|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=102
|rna_catalog_number=Cat:RtpHAN: Brain
|rna_concentration=2.7
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_lot_number=A505663
|rna_od260/230=
|rna_od260/280=
|rna_position=A4
|rna_rin=7.2
|rna_sample_type=total RNA
|rna_tube_id=102A4
|rna_weight_ug=50
|sample_age=
|sample_category=tissues
|sample_cell_catalog=NA
|sample_cell_line=
|sample_cell_lot=NA
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Biochain
|sample_description=
|sample_dev_stage=27 years old adult
|sample_disease=normal
|sample_donor(cell lot)=1
|sample_ethnicity=A?
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.34416772869082e-288!GO:0005737;cytoplasm;1.97999761678666e-160!GO:0044444;cytoplasmic part;9.06985236018169e-111!GO:0043226;organelle;3.16377588189858e-93!GO:0043229;intracellular organelle;9.72428063602089e-93!GO:0043227;membrane-bound organelle;1.77419800554842e-87!GO:0043231;intracellular membrane-bound organelle;2.30430277999414e-87!GO:0044422;organelle part;8.58134240426779e-69!GO:0044446;intracellular organelle part;6.45451251369782e-68!GO:0032991;macromolecular complex;4.76370109169142e-63!GO:0005515;protein binding;3.25848588340828e-58!GO:0005739;mitochondrion;1.16907802802022e-49!GO:0030529;ribonucleoprotein complex;5.53765904324819e-45!GO:0016043;cellular component organization and biogenesis;8.18047830873998e-44!GO:0031090;organelle membrane;3.27303349314644e-42!GO:0015031;protein transport;4.76757230717112e-38!GO:0044429;mitochondrial part;1.04561029127759e-37!GO:0033036;macromolecule localization;1.48187235338709e-37!GO:0003723;RNA binding;1.81577509653945e-37!GO:0043234;protein complex;4.54865969154086e-35!GO:0008104;protein localization;6.57283822310829e-35!GO:0045184;establishment of protein localization;6.55357842746537e-34!GO:0046907;intracellular transport;2.70884431397796e-30!GO:0043233;organelle lumen;4.1347248792322e-30!GO:0031974;membrane-enclosed lumen;4.1347248792322e-30!GO:0031975;envelope;1.39866979969785e-29!GO:0031967;organelle envelope;1.84001111857119e-29!GO:0005840;ribosome;1.47092261221289e-28!GO:0051649;establishment of cellular localization;3.26161145223597e-28!GO:0051641;cellular localization;4.82313459010731e-28!GO:0019538;protein metabolic process;4.28278440362238e-26!GO:0044428;nuclear part;5.04250398207093e-26!GO:0005829;cytosol;1.56354895522288e-25!GO:0005740;mitochondrial envelope;2.21112697581195e-25!GO:0016192;vesicle-mediated transport;3.60850716202347e-25!GO:0031966;mitochondrial membrane;5.86148000782944e-25!GO:0044238;primary metabolic process;4.53837530726903e-24!GO:0003735;structural constituent of ribosome;5.01611364241721e-24!GO:0006119;oxidative phosphorylation;6.19234525397261e-24!GO:0044260;cellular macromolecule metabolic process;4.38203216897547e-23!GO:0044237;cellular metabolic process;4.54680132172973e-23!GO:0044267;cellular protein metabolic process;1.69749804232321e-22!GO:0006886;intracellular protein transport;1.99985980472718e-22!GO:0019866;organelle inner membrane;2.1403446903026e-22!GO:0005743;mitochondrial inner membrane;1.07606612164082e-21!GO:0016071;mRNA metabolic process;1.07606612164082e-21!GO:0006412;translation;2.97898523370462e-21!GO:0043170;macromolecule metabolic process;3.29493674993771e-21!GO:0008380;RNA splicing;1.1415709713585e-20!GO:0006396;RNA processing;1.43842269146553e-20!GO:0033279;ribosomal subunit;2.15297455939351e-20!GO:0005794;Golgi apparatus;2.51667350177543e-20!GO:0009058;biosynthetic process;8.3985548710875e-20!GO:0006996;organelle organization and biogenesis;4.53399204802566e-19!GO:0031982;vesicle;5.03017770645146e-19!GO:0044455;mitochondrial membrane part;6.3606650282379e-19!GO:0031410;cytoplasmic vesicle;2.08953134986371e-18!GO:0006397;mRNA processing;6.2076558293365e-18!GO:0031988;membrane-bound vesicle;6.24107969462615e-18!GO:0005746;mitochondrial respiratory chain;1.15437696712179e-17!GO:0065003;macromolecular complex assembly;1.66394909788142e-17!GO:0016023;cytoplasmic membrane-bound vesicle;2.59787605451524e-17!GO:0009059;macromolecule biosynthetic process;1.01054826743406e-16!GO:0044249;cellular biosynthetic process;3.34886089003815e-16!GO:0050136;NADH dehydrogenase (quinone) activity;7.55157014191741e-16!GO:0003954;NADH dehydrogenase activity;7.55157014191741e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;7.55157014191741e-16!GO:0022607;cellular component assembly;9.4340982855078e-16!GO:0005634;nucleus;1.16703964266704e-15!GO:0012505;endomembrane system;1.18220855370794e-15!GO:0006512;ubiquitin cycle;2.48569946372937e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.76315402743887e-15!GO:0031980;mitochondrial lumen;5.06922504255413e-15!GO:0005759;mitochondrial matrix;5.06922504255413e-15!GO:0000166;nucleotide binding;6.28248102521589e-15!GO:0031981;nuclear lumen;1.61946793738091e-14!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.15164993969477e-14!GO:0030964;NADH dehydrogenase complex (quinone);5.47146403479579e-14!GO:0045271;respiratory chain complex I;5.47146403479579e-14!GO:0005747;mitochondrial respiratory chain complex I;5.47146403479579e-14!GO:0045045;secretory pathway;5.96311505966377e-14!GO:0005681;spliceosome;6.82994703321182e-14!GO:0044445;cytosolic part;9.30320926586776e-14!GO:0042775;organelle ATP synthesis coupled electron transport;1.03548517805489e-13!GO:0042773;ATP synthesis coupled electron transport;1.03548517805489e-13!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.42868324972084e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.73550841597009e-13!GO:0016817;hydrolase activity, acting on acid anhydrides;1.75576940800921e-13!GO:0016462;pyrophosphatase activity;1.76476694218917e-13!GO:0043412;biopolymer modification;2.94089790925696e-13!GO:0016874;ligase activity;5.08787541285641e-13!GO:0006464;protein modification process;1.06340907475278e-12!GO:0017111;nucleoside-triphosphatase activity;1.40696341923349e-12!GO:0030135;coated vesicle;2.01473296481041e-12!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.95557802943436e-12!GO:0006457;protein folding;4.06013003818073e-12!GO:0043687;post-translational protein modification;4.69308009379892e-12!GO:0048193;Golgi vesicle transport;1.00911272167759e-11!GO:0048770;pigment granule;1.683988463428e-11!GO:0042470;melanosome;1.683988463428e-11!GO:0032553;ribonucleotide binding;2.26663333186706e-11!GO:0032555;purine ribonucleotide binding;2.26663333186706e-11!GO:0015935;small ribosomal subunit;3.44385294791749e-11!GO:0006810;transport;3.46708874572166e-11!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;4.08348691522187e-11!GO:0022618;protein-RNA complex assembly;4.7117040761628e-11!GO:0019829;cation-transporting ATPase activity;5.28398546174395e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;5.38299736096409e-11!GO:0043283;biopolymer metabolic process;5.50698222293238e-11!GO:0044431;Golgi apparatus part;8.87517702235392e-11!GO:0017076;purine nucleotide binding;2.50908810789607e-10!GO:0006605;protein targeting;2.64758400690174e-10!GO:0015934;large ribosomal subunit;3.39116947724738e-10!GO:0051603;proteolysis involved in cellular protein catabolic process;3.4680005524792e-10!GO:0008135;translation factor activity, nucleic acid binding;3.47583641380008e-10!GO:0007399;nervous system development;3.66010154356488e-10!GO:0007264;small GTPase mediated signal transduction;4.27819417726871e-10!GO:0006511;ubiquitin-dependent protein catabolic process;4.63865762903579e-10!GO:0043228;non-membrane-bound organelle;4.64510510841372e-10!GO:0043232;intracellular non-membrane-bound organelle;4.64510510841372e-10!GO:0043005;neuron projection;5.44954366394408e-10!GO:0019941;modification-dependent protein catabolic process;5.80943504227978e-10!GO:0043632;modification-dependent macromolecule catabolic process;5.80943504227978e-10!GO:0051186;cofactor metabolic process;5.94397387131461e-10!GO:0051082;unfolded protein binding;6.7793787167718e-10!GO:0044257;cellular protein catabolic process;7.01161425245831e-10!GO:0008092;cytoskeletal protein binding;1.0670357162504e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.09251427404101e-09!GO:0005783;endoplasmic reticulum;1.4864390303171e-09!GO:0006793;phosphorus metabolic process;1.50547371924457e-09!GO:0006796;phosphate metabolic process;1.50547371924457e-09!GO:0005768;endosome;1.82184367092083e-09!GO:0003924;GTPase activity;1.89328413032624e-09!GO:0008565;protein transporter activity;1.92089446907447e-09!GO:0015986;ATP synthesis coupled proton transport;2.25737185860223e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.25737185860223e-09!GO:0005654;nucleoplasm;2.61588165359077e-09!GO:0000502;proteasome complex (sensu Eukaryota);3.25490872864172e-09!GO:0005761;mitochondrial ribosome;3.29269451394495e-09!GO:0000313;organellar ribosome;3.29269451394495e-09!GO:0030136;clathrin-coated vesicle;3.36960652666202e-09!GO:0044265;cellular macromolecule catabolic process;5.23607572824695e-09!GO:0005525;GTP binding;7.74847682111198e-09!GO:0032940;secretion by cell;1.00263815026099e-08!GO:0051234;establishment of localization;1.18597365647589e-08!GO:0030163;protein catabolic process;2.12736884917391e-08!GO:0008639;small protein conjugating enzyme activity;2.24982777470526e-08!GO:0000139;Golgi membrane;2.36996375087109e-08!GO:0051179;localization;2.41798232042713e-08!GO:0044451;nucleoplasm part;3.98069569901869e-08!GO:0007010;cytoskeleton organization and biogenesis;4.43667934898911e-08!GO:0044248;cellular catabolic process;4.79619218440424e-08!GO:0019717;synaptosome;4.80633875641485e-08!GO:0004842;ubiquitin-protein ligase activity;4.80633875641485e-08!GO:0016044;membrane organization and biogenesis;5.6942290001214e-08!GO:0043285;biopolymer catabolic process;6.24686436637731e-08!GO:0046034;ATP metabolic process;6.29582184336493e-08!GO:0009060;aerobic respiration;6.42996361272392e-08!GO:0019787;small conjugating protein ligase activity;8.02443209461289e-08!GO:0010467;gene expression;1.19443932514404e-07!GO:0006163;purine nucleotide metabolic process;1.19443932514404e-07!GO:0006413;translational initiation;1.21316699195825e-07!GO:0006754;ATP biosynthetic process;1.21861985773304e-07!GO:0006753;nucleoside phosphate metabolic process;1.21861985773304e-07!GO:0006732;coenzyme metabolic process;1.28082973362969e-07!GO:0008134;transcription factor binding;1.44575388959641e-07!GO:0009150;purine ribonucleotide metabolic process;1.48269596431388e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.48269596431388e-07!GO:0009144;purine nucleoside triphosphate metabolic process;1.48269596431388e-07!GO:0009141;nucleoside triphosphate metabolic process;1.55862188615025e-07!GO:0006164;purine nucleotide biosynthetic process;1.74622871703993e-07!GO:0009199;ribonucleoside triphosphate metabolic process;2.06663977706827e-07!GO:0009152;purine ribonucleotide biosynthetic process;2.09148505857132e-07!GO:0003743;translation initiation factor activity;2.13947570040576e-07!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.17458211083177e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.19985413218886e-07!GO:0016469;proton-transporting two-sector ATPase complex;2.26397692577952e-07!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.26700196857581e-07!GO:0008287;protein serine/threonine phosphatase complex;2.28998855854477e-07!GO:0005083;small GTPase regulator activity;2.46697267793382e-07!GO:0045333;cellular respiration;2.47316328794819e-07!GO:0009055;electron carrier activity;2.5702349220988e-07!GO:0015078;hydrogen ion transmembrane transporter activity;2.61968984701617e-07!GO:0032561;guanyl ribonucleotide binding;2.64562392070496e-07!GO:0019001;guanyl nucleotide binding;2.64562392070496e-07!GO:0030695;GTPase regulator activity;3.40944994445558e-07!GO:0006446;regulation of translational initiation;3.83811950354809e-07!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;4.02998506759694e-07!GO:0009057;macromolecule catabolic process;4.16571373165924e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;4.16571373165924e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;4.16571373165924e-07!GO:0006461;protein complex assembly;4.16571373165924e-07!GO:0009259;ribonucleotide metabolic process;4.55681558191901e-07!GO:0009142;nucleoside triphosphate biosynthetic process;5.9607399220297e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;5.9607399220297e-07!GO:0015631;tubulin binding;6.1047490446597e-07!GO:0016881;acid-amino acid ligase activity;8.31007139193116e-07!GO:0009260;ribonucleotide biosynthetic process;1.37529888013079e-06!GO:0006099;tricarboxylic acid cycle;1.40967432541778e-06!GO:0046356;acetyl-CoA catabolic process;1.40967432541778e-06!GO:0048471;perinuclear region of cytoplasm;1.62054362065821e-06!GO:0016310;phosphorylation;1.62054362065821e-06!GO:0000398;nuclear mRNA splicing, via spliceosome;1.66130156474182e-06!GO:0000375;RNA splicing, via transesterification reactions;1.66130156474182e-06!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.66130156474182e-06!GO:0006913;nucleocytoplasmic transport;1.97918517231905e-06!GO:0030036;actin cytoskeleton organization and biogenesis;2.07796737319783e-06!GO:0031965;nuclear membrane;2.10906927169624e-06!GO:0051169;nuclear transport;2.68761533748774e-06!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.82580534984839e-06!GO:0032559;adenyl ribonucleotide binding;2.93790996368427e-06!GO:0045259;proton-transporting ATP synthase complex;3.51846250283368e-06!GO:0008021;synaptic vesicle;3.85246086864234e-06!GO:0048475;coated membrane;3.88866766132715e-06!GO:0030117;membrane coat;3.88866766132715e-06!GO:0044440;endosomal part;4.11756249741343e-06!GO:0010008;endosome membrane;4.11756249741343e-06!GO:0009109;coenzyme catabolic process;4.22036115438151e-06!GO:0044432;endoplasmic reticulum part;4.66798240430386e-06!GO:0030425;dendrite;4.77643472843468e-06!GO:0006084;acetyl-CoA metabolic process;6.29521099292043e-06!GO:0005770;late endosome;7.13222679079086e-06!GO:0005905;coated pit;7.38606274432191e-06!GO:0005524;ATP binding;7.90334385051925e-06!GO:0019226;transmission of nerve impulse;8.77267312447725e-06!GO:0016604;nuclear body;9.18059602706542e-06!GO:0005635;nuclear envelope;9.18059602706542e-06!GO:0022890;inorganic cation transmembrane transporter activity;1.12293360060014e-05!GO:0015630;microtubule cytoskeleton;1.12293360060014e-05!GO:0030029;actin filament-based process;1.30190353203638e-05!GO:0032446;protein modification by small protein conjugation;1.621643964102e-05!GO:0017038;protein import;1.63171817692822e-05!GO:0019899;enzyme binding;1.63445424023413e-05!GO:0030554;adenyl nucleotide binding;1.97615701791613e-05!GO:0005769;early endosome;2.20661961942331e-05!GO:0051187;cofactor catabolic process;2.28827725433423e-05!GO:0005798;Golgi-associated vesicle;2.29167574799417e-05!GO:0016567;protein ubiquitination;2.89449969962743e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;3.30102888160477e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;3.42460343987212e-05!GO:0015399;primary active transmembrane transporter activity;3.42460343987212e-05!GO:0016607;nuclear speck;3.44135766439274e-05!GO:0003779;actin binding;3.48482594500788e-05!GO:0042623;ATPase activity, coupled;3.51766929456598e-05!GO:0005730;nucleolus;3.54019320107043e-05!GO:0005789;endoplasmic reticulum membrane;3.72539896194869e-05!GO:0030120;vesicle coat;3.96595017985552e-05!GO:0030662;coated vesicle membrane;3.96595017985552e-05!GO:0048489;synaptic vesicle transport;4.29447477517899e-05!GO:0051188;cofactor biosynthetic process;4.85395795065647e-05!GO:0007269;neurotransmitter secretion;4.92005606146199e-05!GO:0005874;microtubule;4.95795931707392e-05!GO:0016887;ATPase activity;5.50692569130773e-05!GO:0007242;intracellular signaling cascade;5.74814563150409e-05!GO:0051128;regulation of cellular component organization and biogenesis;7.17103325212438e-05!GO:0006897;endocytosis;7.5193381852428e-05!GO:0010324;membrane invagination;7.5193381852428e-05!GO:0008654;phospholipid biosynthetic process;7.70215083989345e-05!GO:0031252;leading edge;7.83626997527398e-05!GO:0009056;catabolic process;0.000115510864423306!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000132368877299217!GO:0016311;dephosphorylation;0.000150591329371107!GO:0046467;membrane lipid biosynthetic process;0.000159950353766914!GO:0008017;microtubule binding;0.000175541102488323!GO:0007268;synaptic transmission;0.000181627515009879!GO:0045055;regulated secretory pathway;0.000184941873734964!GO:0006325;establishment and/or maintenance of chromatin architecture;0.000193353245255312!GO:0006888;ER to Golgi vesicle-mediated transport;0.000195845029696086!GO:0043492;ATPase activity, coupled to movement of substances;0.000220030070111333!GO:0004721;phosphoprotein phosphatase activity;0.000230238834814088!GO:0006650;glycerophospholipid metabolic process;0.000232840376695232!GO:0019208;phosphatase regulator activity;0.000238130259606834!GO:0000151;ubiquitin ligase complex;0.00023884545229164!GO:0030133;transport vesicle;0.000249289822674052!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000274793831109365!GO:0003729;mRNA binding;0.000292468122612542!GO:0003712;transcription cofactor activity;0.000309602784658999!GO:0000245;spliceosome assembly;0.000312027110209532!GO:0048523;negative regulation of cellular process;0.000323230219632825!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000327294509895344!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.00032987242722702!GO:0006752;group transfer coenzyme metabolic process;0.000348789852397984!GO:0005793;ER-Golgi intermediate compartment;0.000350426178064025!GO:0006613;cotranslational protein targeting to membrane;0.000352876667405374!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000359219827973726!GO:0006323;DNA packaging;0.000361694671621342!GO:0000159;protein phosphatase type 2A complex;0.000370963106385871!GO:0005741;mitochondrial outer membrane;0.000395055769128317!GO:0006470;protein amino acid dephosphorylation;0.000402142799319539!GO:0009108;coenzyme biosynthetic process;0.000447059341180874!GO:0007265;Ras protein signal transduction;0.000459684403602041!GO:0044453;nuclear membrane part;0.000480294000299952!GO:0005773;vacuole;0.000494478511904139!GO:0016791;phosphoric monoester hydrolase activity;0.00052180032495801!GO:0019888;protein phosphatase regulator activity;0.000622987459148825!GO:0008601;protein phosphatase type 2A regulator activity;0.000639624017855226!GO:0000902;cell morphogenesis;0.000668965351100647!GO:0032989;cellular structure morphogenesis;0.000668965351100647!GO:0001505;regulation of neurotransmitter levels;0.000730253438165971!GO:0006643;membrane lipid metabolic process;0.000734875117932607!GO:0005643;nuclear pore;0.0007576479082605!GO:0015980;energy derivation by oxidation of organic compounds;0.000794585389322883!GO:0051246;regulation of protein metabolic process;0.000803537950525411!GO:0045786;negative regulation of progression through cell cycle;0.000882337842446274!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000882337842446274!GO:0008047;enzyme activator activity;0.00089418155382685!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00089418155382685!GO:0004812;aminoacyl-tRNA ligase activity;0.00089418155382685!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00089418155382685!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000971300455757629!GO:0007019;microtubule depolymerization;0.000992465534850564!GO:0019867;outer membrane;0.000998407333939362!GO:0006606;protein import into nucleus;0.00106247648481186!GO:0031968;organelle outer membrane;0.00107565640490132!GO:0004722;protein serine/threonine phosphatase activity;0.00112100667493756!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00119542819876973!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00119542819876973!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00119542819876973!GO:0031072;heat shock protein binding;0.00124354171220245!GO:0051170;nuclear import;0.0012930702146497!GO:0030027;lamellipodium;0.00132448010733918!GO:0030384;phosphoinositide metabolic process;0.00132849400667768!GO:0030118;clathrin coat;0.00136255264580231!GO:0051056;regulation of small GTPase mediated signal transduction;0.00136500383798886!GO:0043623;cellular protein complex assembly;0.00148449019107992!GO:0003697;single-stranded DNA binding;0.00157219678769531!GO:0019902;phosphatase binding;0.00160407650821337!GO:0016564;transcription repressor activity;0.00160651019807498!GO:0005762;mitochondrial large ribosomal subunit;0.00160940558465345!GO:0000315;organellar large ribosomal subunit;0.00160940558465345!GO:0016568;chromatin modification;0.0017453601756014!GO:0048167;regulation of synaptic plasticity;0.0017453601756014!GO:0000314;organellar small ribosomal subunit;0.0017453601756014!GO:0005763;mitochondrial small ribosomal subunit;0.0017453601756014!GO:0043566;structure-specific DNA binding;0.0017453601756014!GO:0043038;amino acid activation;0.0017453601756014!GO:0006418;tRNA aminoacylation for protein translation;0.0017453601756014!GO:0043039;tRNA aminoacylation;0.0017453601756014!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00175140116272247!GO:0006414;translational elongation;0.00177935661683226!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.0018752119177094!GO:0009117;nucleotide metabolic process;0.00190039861993703!GO:0016197;endosome transport;0.00194105490884721!GO:0005516;calmodulin binding;0.00220127999493436!GO:0005875;microtubule associated complex;0.00223866695782965!GO:0008154;actin polymerization and/or depolymerization;0.00232750659309573!GO:0006403;RNA localization;0.00234836049880766!GO:0030427;site of polarized growth;0.00235033716522286!GO:0048519;negative regulation of biological process;0.0023783146316249!GO:0030426;growth cone;0.00250848480316312!GO:0006892;post-Golgi vesicle-mediated transport;0.0025729831383703!GO:0016301;kinase activity;0.00258620877496647!GO:0005869;dynactin complex;0.00264211931018309!GO:0031111;negative regulation of microtubule polymerization or depolymerization;0.00264433094293555!GO:0016050;vesicle organization and biogenesis;0.00273574049245345!GO:0005096;GTPase activator activity;0.00274568223396102!GO:0050657;nucleic acid transport;0.00282926447990455!GO:0051236;establishment of RNA localization;0.00282926447990455!GO:0050658;RNA transport;0.00282926447990455!GO:0050767;regulation of neurogenesis;0.00283925724128577!GO:0050803;regulation of synapse structure and activity;0.00297201424386197!GO:0048487;beta-tubulin binding;0.00303988322858287!GO:0051129;negative regulation of cellular component organization and biogenesis;0.00306283240953204!GO:0000323;lytic vacuole;0.00313095584010482!GO:0005764;lysosome;0.00313095584010482!GO:0031114;regulation of microtubule depolymerization;0.00318185231783405!GO:0007026;negative regulation of microtubule depolymerization;0.00318185231783405!GO:0031901;early endosome membrane;0.00320975528301675!GO:0016740;transferase activity;0.00322229127813104!GO:0005839;proteasome core complex (sensu Eukaryota);0.0032724306484317!GO:0005938;cell cortex;0.0034385899223339!GO:0012506;vesicle membrane;0.00361941023831001!GO:0030054;cell junction;0.00372443428392661!GO:0030424;axon;0.00372443428392661!GO:0030532;small nuclear ribonucleoprotein complex;0.00377699327366522!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00389250036411849!GO:0043209;myelin sheath;0.00390102447340825!GO:0022406;membrane docking;0.00398070588834723!GO:0048278;vesicle docking;0.00398070588834723!GO:0046488;phosphatidylinositol metabolic process;0.00417006131160306!GO:0065002;intracellular protein transport across a membrane;0.00421617473044416!GO:0008610;lipid biosynthetic process;0.00425257979807703!GO:0051427;hormone receptor binding;0.00431713924184614!GO:0006259;DNA metabolic process;0.00432990048941234!GO:0006891;intra-Golgi vesicle-mediated transport;0.00445303290517934!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00446814785865059!GO:0003714;transcription corepressor activity;0.00450388888001848!GO:0006333;chromatin assembly or disassembly;0.0045254488303979!GO:0031902;late endosome membrane;0.00468444043348273!GO:0006904;vesicle docking during exocytosis;0.00492343723627019!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00496138571356238!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00496138571356238!GO:0004674;protein serine/threonine kinase activity;0.00504388703715201!GO:0005048;signal sequence binding;0.005346623525552!GO:0051087;chaperone binding;0.00563715452208102!GO:0006612;protein targeting to membrane;0.00624908415204035!GO:0006665;sphingolipid metabolic process;0.0066331972184497!GO:0007017;microtubule-based process;0.00666663413984954!GO:0051540;metal cluster binding;0.00674612281214546!GO:0051536;iron-sulfur cluster binding;0.00674612281214546!GO:0019903;protein phosphatase binding;0.00675215251036806!GO:0044456;synapse part;0.00682596106784073!GO:0046474;glycerophospholipid biosynthetic process;0.00682596106784073!GO:0005085;guanyl-nucleotide exchange factor activity;0.00692215287768482!GO:0050811;GABA receptor binding;0.0069501055528049!GO:0048699;generation of neurons;0.00702648754900625!GO:0051261;protein depolymerization;0.00709860380808807!GO:0044433;cytoplasmic vesicle part;0.0072459765751931!GO:0030867;rough endoplasmic reticulum membrane;0.00725040790022834!GO:0008026;ATP-dependent helicase activity;0.00725040790022834!GO:0051920;peroxiredoxin activity;0.00725829885186519!GO:0035257;nuclear hormone receptor binding;0.00735572562305619!GO:0030660;Golgi-associated vesicle membrane;0.00757390574958498!GO:0022008;neurogenesis;0.00771657003441327!GO:0043681;protein import into mitochondrion;0.00800231748906101!GO:0001578;microtubule bundle formation;0.00801355503403723!GO:0005774;vacuolar membrane;0.00829032657508411!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00836288564712683!GO:0005001;transmembrane receptor protein tyrosine phosphatase activity;0.00870908912029784!GO:0019198;transmembrane receptor protein phosphatase activity;0.00870908912029784!GO:0030865;cortical cytoskeleton organization and biogenesis;0.00875322342468292!GO:0006644;phospholipid metabolic process;0.00890831564426266!GO:0030742;GTP-dependent protein binding;0.00900759809638235!GO:0006607;NLS-bearing substrate import into nucleus;0.009085685112629!GO:0030258;lipid modification;0.00925853937673791!GO:0016126;sterol biosynthetic process;0.00947057163056188!GO:0030041;actin filament polymerization;0.00956814409216475!GO:0042578;phosphoric ester hydrolase activity;0.00980373512378507!GO:0006818;hydrogen transport;0.00995311053827216!GO:0030132;clathrin coat of coated pit;0.00998948553257146!GO:0030658;transport vesicle membrane;0.010055101966896!GO:0003746;translation elongation factor activity;0.0102522017351773!GO:0050839;cell adhesion molecule binding;0.0103328274176764!GO:0004298;threonine endopeptidase activity;0.0103603497274195!GO:0003724;RNA helicase activity;0.0103603497274195!GO:0008180;signalosome;0.010872911784607!GO:0009165;nucleotide biosynthetic process;0.010872911784607!GO:0007611;learning and/or memory;0.0111755566765963!GO:0048500;signal recognition particle;0.0118013550992466!GO:0005791;rough endoplasmic reticulum;0.0122392960520258!GO:0006887;exocytosis;0.0123000303266001!GO:0007005;mitochondrion organization and biogenesis;0.0123060813422743!GO:0042254;ribosome biogenesis and assembly;0.0123577767788711!GO:0046578;regulation of Ras protein signal transduction;0.0125422417892636!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0125897468727878!GO:0008250;oligosaccharyl transferase complex;0.0126904394935387!GO:0007272;ensheathment of neurons;0.0128687611889976!GO:0008366;axon ensheathment;0.0128687611889976!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0129703722022801!GO:0044448;cell cortex part;0.0130273511078034!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0132476586571892!GO:0006091;generation of precursor metabolites and energy;0.0133384797579106!GO:0032011;ARF protein signal transduction;0.0138794723166517!GO:0032012;regulation of ARF protein signal transduction;0.0138794723166517!GO:0004386;helicase activity;0.0138798438833309!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.0140975641455904!GO:0004667;prostaglandin-D synthase activity;0.0140975641455904!GO:0050802;circadian sleep/wake cycle, sleep;0.0140975641455904!GO:0022410;circadian sleep/wake cycle process;0.0140975641455904!GO:0042749;regulation of circadian sleep/wake cycle;0.0140975641455904!GO:0030182;neuron differentiation;0.0141545705512598!GO:0006402;mRNA catabolic process;0.0144508109013797!GO:0060052;neurofilament cytoskeleton organization and biogenesis;0.0144673073323712!GO:0006672;ceramide metabolic process;0.0145822370388511!GO:0051276;chromosome organization and biogenesis;0.0148367707119817!GO:0015992;proton transport;0.0149370131011794!GO:0035035;histone acetyltransferase binding;0.0150844083019013!GO:0030320;cellular monovalent inorganic anion homeostasis;0.0152229638007918!GO:0055083;monovalent inorganic anion homeostasis;0.0152229638007918!GO:0055064;chloride ion homeostasis;0.0152229638007918!GO:0030644;cellular chloride ion homeostasis;0.0152229638007918!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.0152819279651824!GO:0008139;nuclear localization sequence binding;0.0160053459075524!GO:0006916;anti-apoptosis;0.0165316897869465!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0167992655550262!GO:0015002;heme-copper terminal oxidase activity;0.0167992655550262!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0167992655550262!GO:0004129;cytochrome-c oxidase activity;0.0167992655550262!GO:0005885;Arp2/3 protein complex;0.0170449726986027!GO:0007266;Rho protein signal transduction;0.0175082661824789!GO:0051287;NAD binding;0.0175082661824789!GO:0030125;clathrin vesicle coat;0.0175082661824789!GO:0030665;clathrin coated vesicle membrane;0.0175082661824789!GO:0019904;protein domain specific binding;0.0179433580027275!GO:0030137;COPI-coated vesicle;0.0181346733714813!GO:0019887;protein kinase regulator activity;0.0181346733714813!GO:0009966;regulation of signal transduction;0.0183377494656643!GO:0005765;lysosomal membrane;0.0186196911369453!GO:0030659;cytoplasmic vesicle membrane;0.0186211829374449!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0188000729828059!GO:0007006;mitochondrial membrane organization and biogenesis;0.0189618031232298!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0190022591473053!GO:0051028;mRNA transport;0.0190022591473053!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0190777520207472!GO:0045047;protein targeting to ER;0.0190777520207472!GO:0000059;protein import into nucleus, docking;0.0192085597629731!GO:0016079;synaptic vesicle exocytosis;0.0204369460432151!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.0213434103233365!GO:0001508;regulation of action potential;0.0213693114458411!GO:0043021;ribonucleoprotein binding;0.021438531094343!GO:0031109;microtubule polymerization or depolymerization;0.021883850353583!GO:0004576;oligosaccharyl transferase activity;0.022069636773161!GO:0003730;mRNA 3'-UTR binding;0.0221389028061627!GO:0035258;steroid hormone receptor binding;0.0222483804372199!GO:0005868;cytoplasmic dynein complex;0.0226213283907058!GO:0004683;calmodulin-dependent protein kinase activity;0.0226938870029646!GO:0043284;biopolymer biosynthetic process;0.0228661218651269!GO:0046519;sphingoid metabolic process;0.0228661218651269!GO:0051168;nuclear export;0.0228661218651269!GO:0005086;ARF guanyl-nucleotide exchange factor activity;0.0228661218651269!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0230596270101233!GO:0019843;rRNA binding;0.0236615389530767!GO:0044437;vacuolar part;0.0236627287126669!GO:0007034;vacuolar transport;0.0245546257033206!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.024684562443609!GO:0019894;kinesin binding;0.0247924392990251!GO:0031301;integral to organelle membrane;0.0248516349891125!GO:0031124;mRNA 3'-end processing;0.0250223557527297!GO:0046930;pore complex;0.0252720129190961!GO:0005092;GDP-dissociation inhibitor activity;0.0255239997674254!GO:0005100;Rho GTPase activator activity;0.02630051384483!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.02630051384483!GO:0033043;regulation of organelle organization and biogenesis;0.02630051384483!GO:0016579;protein deubiquitination;0.0271720285889899!GO:0005813;centrosome;0.028847148815831!GO:0030030;cell projection organization and biogenesis;0.0288767129703019!GO:0048858;cell projection morphogenesis;0.0288767129703019!GO:0032990;cell part morphogenesis;0.0288767129703019!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0291679789717914!GO:0045296;cadherin binding;0.0292553320851985!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0293300461663985!GO:0048666;neuron development;0.0297338197409069!GO:0030641;cellular hydrogen ion homeostasis;0.0312231318888162!GO:0046489;phosphoinositide biosynthetic process;0.0318245844320438!GO:0031371;ubiquitin conjugating enzyme complex;0.0326985193428853!GO:0008361;regulation of cell size;0.0329893289206789!GO:0043488;regulation of mRNA stability;0.0329893289206789!GO:0043487;regulation of RNA stability;0.0329893289206789!GO:0000904;cellular morphogenesis during differentiation;0.0329893289206789!GO:0000287;magnesium ion binding;0.0329893289206789!GO:0000062;acyl-CoA binding;0.033251997965265!GO:0043025;cell soma;0.0333824809501329!GO:0019911;structural constituent of myelin sheath;0.0334598635177589!GO:0051252;regulation of RNA metabolic process;0.0347052739395393!GO:0046839;phospholipid dephosphorylation;0.0349024425802914!GO:0001726;ruffle;0.0349024425802914!GO:0006661;phosphatidylinositol biosynthetic process;0.036194091414288!GO:0042176;regulation of protein catabolic process;0.0363830237736638!GO:0008312;7S RNA binding;0.0363830237736638!GO:0009892;negative regulation of metabolic process;0.0363910153302314!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0367457249683719!GO:0004423;iduronate-2-sulfatase activity;0.0370800927503711!GO:0042995;cell projection;0.0370979540202415!GO:0030911;TPR domain binding;0.0373194987072095!GO:0016859;cis-trans isomerase activity;0.0379065560974309!GO:0006595;polyamine metabolic process;0.0379426894056386!GO:0048168;regulation of neuronal synaptic plasticity;0.0384920983649907!GO:0008088;axon cargo transport;0.0392050759483389!GO:0006399;tRNA metabolic process;0.0406080183857083!GO:0019783;small conjugating protein-specific protease activity;0.0414421394784083!GO:0032956;regulation of actin cytoskeleton organization and biogenesis;0.0414741117263167!GO:0003713;transcription coactivator activity;0.0416271737160272!GO:0043069;negative regulation of programmed cell death;0.0421702296706541!GO:0042670;retinal cone cell differentiation;0.0425406918060332!GO:0051281;positive regulation of release of sequestered calcium ion into cytosol;0.0425406918060332!GO:0046549;retinal cone cell development;0.0425406918060332!GO:0005099;Ras GTPase activator activity;0.042691475523536!GO:0033673;negative regulation of kinase activity;0.0429948594712067!GO:0006469;negative regulation of protein kinase activity;0.0429948594712067!GO:0004113;2',3'-cyclic-nucleotide 3'-phosphodiesterase activity;0.0434809928628364!GO:0009214;cyclic nucleotide catabolic process;0.0434809928628364!GO:0065004;protein-DNA complex assembly;0.0434873867038916!GO:0019207;kinase regulator activity;0.0443432406864471!GO:0008429;phosphatidylethanolamine binding;0.0455041188072862!GO:0043066;negative regulation of apoptosis;0.0460137432352319!GO:0008186;RNA-dependent ATPase activity;0.0469041462969054!GO:0051539;4 iron, 4 sulfur cluster binding;0.0478035004041734!GO:0007033;vacuole organization and biogenesis;0.0484158768636439!GO:0008090;retrograde axon cargo transport;0.0484158768636439!GO:0033596;TSC1-TSC2 complex;0.0484158768636439!GO:0033693;neurofilament bundle assembly;0.0484158768636439!GO:0043254;regulation of protein complex assembly;0.0484239538954244!GO:0048667;neuron morphogenesis during differentiation;0.0484288158460883!GO:0048812;neurite morphogenesis;0.0484288158460883!GO:0004843;ubiquitin-specific protease activity;0.0487968983874697!GO:0030176;integral to endoplasmic reticulum membrane;0.0487989453277575!GO:0032535;regulation of cellular component size;0.0489084742097183!GO:0030140;trans-Golgi network transport vesicle;0.0489491121546373!GO:0031628;opioid receptor binding;0.0489491121546373!GO:0031852;mu-type opioid receptor binding;0.0489491121546373!GO:0000209;protein polyubiquitination;0.0496400817765805!GO:0007049;cell cycle;0.0497246535634165!GO:0033130;acetylcholine receptor binding;0.0498998164454976
|sample_id=10076
|sample_note=
|sample_sex=male
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=occipital lobe
|top_motifs=HOXA9_MEIS1:4.7375570931;REST:4.51530246565;NHLH1,2:3.9384133188;ZBTB6:3.93687723764;EGR1..3:3.88896278486;MTE{core}:3.77089354565;MYFfamily:3.72923784919;MED-1{core}:3.62586249905;AHR_ARNT_ARNT2:3.58227002577;FOXM1:3.56811414321;ZFP161:3.53959720452;CUX2:3.40666287717;PRRX1,2:3.3467008012;TFAP2B:3.25256267825;MTF1:3.24603657608;PAX5:3.24021042788;DBP:3.1056940318;POU6F1:2.84719592997;HIC1:2.75114281438;GTF2I:2.73806840993;ATF2:2.68722234501;OCT4_SOX2{dimer}:2.68070890079;PAX6:2.58396310429;RFX1:2.56044349697;BREu{core}:2.52112105066;MZF1:2.50849985334;XBP1:2.42763017374;SOX5:2.39520465145;POU5F1:2.38438964541;PRDM1:2.33852421365;TFDP1:2.33815257992;NFIX:2.32894742463;LMO2:2.32623600605;HMGA1,2:2.27043148142;POU3F1..4:2.26636008524;GFI1B:2.25028562141;SMAD1..7,9:2.20808359381;HOX{A4,D4}:2.1640611611;SOX2:2.15707754699;PATZ1:2.12254316393;TEF:2.11461618879;CDC5L:2.10428903074;NKX3-2:2.09494172282;RREB1:2.05371220942;MAFB:2.01343433818;JUN:1.96641004232;GATA4:1.95668058555;GCM1,2:1.92463936416;ARID5B:1.9227796386;MAZ:1.90075699662;KLF4:1.89450639177;SOX17:1.88734737241;FOXQ1:1.87102682009;TGIF1:1.86282860222;RFX2..5_RFXANK_RFXAP:1.81106285041;FOXP1:1.68726269089;FOX{F1,F2,J1}:1.52329011041;SPZ1:1.49608778631;ZNF384:1.49307069144;SOX{8,9,10}:1.44494204504;NRF1:1.43539865154;ALX1:1.43452097099;NKX6-1,2:1.42495206274;LEF1_TCF7_TCF7L1,2:1.41641824722;MYOD1:1.41278619586;EBF1:1.37635593365;NKX2-3_NKX2-5:1.37342680071;ONECUT1,2:1.36828450205;HBP1_HMGB_SSRP1_UBTF:1.34886030176;FOXD3:1.29016703658;NFIL3:1.28090127186;IKZF2:1.26117096057;HAND1,2:1.2092133767;CRX:1.20826415605;TFAP2{A,C}:1.16573194217;RBPJ:1.12308895109;FOXL1:1.1205110318;ESRRA:1.09014525714;BPTF:1.06610053587;RORA:1.02853353592;ZNF423:1.02456193104;PAX4:1.00441865153;GTF2A1,2:0.998665163943;ZEB1:0.948980285005;FOXP3:0.945592266778;ZNF238:0.91543322024;NFE2L1:0.878614719112;UFEwm:0.827539586455;NANOG:0.825486949256;YY1:0.760770239172;ADNP_IRX_SIX_ZHX:0.740528108283;CREB1:0.732730054271;SREBF1,2:0.725959167723;T:0.713458543611;ZNF143:0.671688032483;MYBL2:0.638370789306;ATF5_CREB3:0.633301931943;TBX4,5:0.607180854808;EP300:0.573202155827;ATF4:0.56821350768;GZF1:0.502789276683;HMX1:0.488911026738;ZIC1..3:0.479334188619;MEF2{A,B,C,D}:0.463588817952;SP1:0.431363194161;POU1F1:0.4082615558;TLX2:0.374438965766;VSX1,2:0.36273276943;GFI1:0.290811717357;AR:0.25283243662;FOXN1:0.249146632763;IKZF1:0.214117733079;NKX2-2,8:0.202001057316;LHX3,4:0.12223595459;XCPE1{core}:0.119756687511;PAX8:0.079169157875;TLX1..3_NFIC{dimer}:0.0746385878448;ZBTB16:0.0387863158397;FOX{D1,D2}:0.0118211479571;FOX{I1,J2}:-0.0152519940996;STAT1,3:-0.0363476671895;bHLH_family:-0.0544061799662;PAX2:-0.0797634276885;PDX1:-0.135363244353;PAX1,9:-0.135380285724;NFE2L2:-0.162807543467;NR5A1,2:-0.173582420349;PBX1:-0.177362436876;HOX{A6,A7,B6,B7}:-0.196681743161;STAT2,4,6:-0.204082607355;NANOG{mouse}:-0.207962849112;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.210004232463;DMAP1_NCOR{1,2}_SMARC:-0.24810461191;TOPORS:-0.260694240141;IRF7:-0.263895538953;FOXA2:-0.27535546725;NR3C1:-0.309683587128;SNAI1..3:-0.354437487249;TFAP4:-0.354602376115;ATF6:-0.382647666503;ESR1:-0.431686176759;TAL1_TCF{3,4,12}:-0.435775004861;NFY{A,B,C}:-0.505754907191;FOXO1,3,4:-0.531830468411;IRF1,2:-0.564254114455;AIRE:-0.578843609741;SPI1:-0.589498649282;RXR{A,B,G}:-0.589544588928;TFCP2:-0.604668734111;CEBPA,B_DDIT3:-0.61207980288;NFATC1..3:-0.61920450089;ZNF148:-0.620976464904;NKX3-1:-0.673803894542;NFE2:-0.691808180696;EVI1:-0.709595003642;PAX3,7:-0.71304944547;NR1H4:-0.747774137962;SPIB:-0.822474924313;PITX1..3:-0.823591607137;GATA6:-0.829525610965;HNF1A:-0.851132159955;HNF4A_NR2F1,2:-0.894543706344;FOSL2:-1.06179802579;TEAD1:-1.06575665436;BACH2:-1.10241356005;TP53:-1.10985381807;FOS_FOS{B,L1}_JUN{B,D}:-1.11981740114;ETS1,2:-1.12919919635;ELK1,4_GABP{A,B1}:-1.15581514546;CDX1,2,4:-1.16427669557;RUNX1..3:-1.1736262891;ALX4:-1.18887013923;HSF1,2:-1.24450064293;GLI1..3:-1.26461889266;NFKB1_REL_RELA:-1.27968626182;HES1:-1.31720918354;E2F1..5:-1.34610493263;STAT5{A,B}:-1.37506995846;TBP:-1.39677417367;SRF:-1.39810703179;HIF1A:-1.40003460114;HLF:-1.43530139243;NKX2-1,4:-1.50336228062;MYB:-1.52250993645;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.53409738978;POU2F1..3:-1.570911808;RXRA_VDR{dimer}:-1.60301938369;PPARG:-1.78235991147;NR6A1:-1.91360414648;ELF1,2,4:-1.94209940192;HOX{A5,B5}:-2.13424212517;EN1,2:-2.17954942647
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10076-102A4;search_select_hide=table117:FF:10076-102A4
}}
}}

Latest revision as of 12:20, 3 June 2020

Name:occipital lobe, adult, donor1
Species:Human (Homo sapiens)
Library ID:CNhs11787
Sample type:tissues
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueoccipital lobe
dev stage27 years old adult
sexmale
ageNA
cell typeCELL MIXTURE - tissue sample
cell lineNA
companyBiochain
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberA505663
catalog numberCat:RtpHAN: Brain
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004850
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11787 CAGE DRX008692 DRR009564
Accession ID Hg19

Library idBAMCTSS
CNhs11787 DRZ000989 DRZ002374
Accession ID Hg38

Library idBAMCTSS
CNhs11787 DRZ012339 DRZ013724
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0.422
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.145
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.356
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0.141
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0.513
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0.081
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0.929
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0.307
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0.149
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.0625
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.486
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.135
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0.149
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.027
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0.068
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.844
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.102
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0.484
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0.081
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0.564
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0.26
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.0154
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.0877
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0.539
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0.208
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0.234
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.566
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.651
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial1.261
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0.149
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.081
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0.725
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0.208
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0.149
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0.454
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0.208
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11787

Jaspar motifP-value
MA0002.20.0049
MA0003.10.313
MA0004.10.356
MA0006.10.378
MA0007.10.263
MA0009.10.214
MA0014.10.537
MA0017.10.00284
MA0018.20.0673
MA0019.10.888
MA0024.10.901
MA0025.10.534
MA0027.10.761
MA0028.10.065
MA0029.10.0499
MA0030.10.665
MA0031.10.467
MA0035.20.0345
MA0038.10.306
MA0039.20.0702
MA0040.10.705
MA0041.10.828
MA0042.10.978
MA0043.10.561
MA0046.10.0157
MA0047.20.0397
MA0048.10.111
MA0050.14.67964e-4
MA0051.10.035
MA0052.10.662
MA0055.10.00162
MA0057.10.843
MA0058.10.276
MA0059.10.0875
MA0060.10.803
MA0061.10.00591
MA0062.20.00341
MA0065.24.72889e-4
MA0066.10.0271
MA0067.10.785
MA0068.10.0969
MA0069.10.442
MA0070.10.325
MA0071.10.027
MA0072.10.229
MA0073.10.322
MA0074.10.211
MA0076.10.11
MA0077.10.27
MA0078.10.753
MA0079.20.596
MA0080.21.07389e-9
MA0081.10.0205
MA0083.10.0591
MA0084.10.78
MA0087.10.695
MA0088.10.121
MA0090.10.236
MA0091.10.617
MA0092.10.353
MA0093.10.363
MA0099.21.18096e-17
MA0100.10.383
MA0101.19.57996e-4
MA0102.20.0568
MA0103.10.28
MA0104.20.411
MA0105.10.00109
MA0106.10.037
MA0107.10.00213
MA0108.20.564
MA0111.10.614
MA0112.26.78574e-4
MA0113.10.268
MA0114.10.00299
MA0115.10.449
MA0116.10.00485
MA0117.10.955
MA0119.10.0484
MA0122.10.769
MA0124.10.684
MA0125.10.376
MA0131.10.766
MA0135.10.097
MA0136.16.28882e-15
MA0137.20.313
MA0138.20.121
MA0139.10.423
MA0140.10.00696
MA0141.10.0169
MA0142.10.88
MA0143.10.872
MA0144.10.268
MA0145.10.2
MA0146.10.00695
MA0147.10.307
MA0148.10.0412
MA0149.10.0122
MA0150.12.59329e-4
MA0152.10.842
MA0153.10.136
MA0154.10.0378
MA0155.10.672
MA0156.14.37605e-9
MA0157.10.386
MA0159.10.00587
MA0160.10.0355
MA0162.10.16
MA0163.12.61642e-5
MA0164.10.958
MA0258.10.00896
MA0259.10.747



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11787

Novel motifP-value
10.0512
100.0415
1000.331
1010.693
1020.768
1030.152
1040.116
1050.0985
1060.0945
1070.153
1080.786
1090.00674
110.0153
1100.036
1110.134
1120.619
1130.631
1140.097
1150.587
1160.297
1170.00903
1180.153
1190.19
120.517
1200.23
1210.393
1220.744
1230.787
1240.0783
1250.397
1260.0266
1270.381
1280.255
1290.58
134.87382e-4
1300.133
1310.208
1320.612
1330.00593
1340.534
1350.321
1360.0113
1370.66
1380.779
1390.153
140.692
1400.587
1410.339
1420.626
1430.0214
1440.989
1450.083
1460.386
1470.99
1480.381
1490.296
150.0736
1500.154
1510.649
1520.13
1530.765
1540.519
1550.369
1560.295
1570.424
1580.796
1590.189
160.0746
1600.223
1610.158
1620.696
1630.665
1640.027
1650.0535
1660.803
1670.52
1680.404
1690.0087
170.129
180.241
190.2
20.914
200.103
210.0949
220.194
230.413
240.0329
250.446
261.12338e-4
270.99
280.623
290.0121
30.0285
300.821
310.916
320.0403
330.0555
340.666
350.535
360.121
370.0353
380.276
390.248
40.878
400.0297
410.394
420.165
430.095
440.209
450.716
460.0672
470.0612
480.0503
490.127
50.487
500.232
510.472
520.617
530.984
540.407
550.422
560.475
570.35
580.288
590.147
60.77
600.0782
610.0598
620.173
630.152
640.237
650.284
660.132
670.315
680.306
690.495
70.0322
700.0556
710.00917
720.328
730.0385
740.571
750.0316
760.479
770.184
780.00284
790.476
80.096
800.545
810.691
820.718
830.0417
840.652
850.272
860.232
870.0036
880.864
890.55
90.403
900.0832
910.606
920.497
930.899
940.139
950.0213
960.82
970.718
980.194
990.734



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11787


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000955 (brain)
0002021 (occipital lobe)
0000956 (cerebral cortex)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0000073 (regional part of nervous system)
0000477 (anatomical cluster)
0003528 (brain grey matter)
0002791 (regional part of telencephalon)
0000467 (anatomical system)
0002619 (regional part of cerebral cortex)
0001062 (anatomical entity)
0000480 (anatomical group)
0002616 (regional part of brain)
0002780 (regional part of forebrain)
0002020 (gray matter)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)
0001869 (cerebral hemisphere)
0001893 (telencephalon)
0001890 (forebrain)
0000203 (pallium)
0001950 (neocortex)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010076 (human occipital lobe - adult sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0010316 (germ layer / neural crest)

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