FF:10180-103C9: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(23 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005584 | ||
|accession_numbers=CAGE;DRX008708;DRR009580;DRZ001005;DRZ002390;DRZ012355;DRZ013740 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000955,UBERON:0000007,UBERON:0001894,UBERON:0000479,UBERON:0004121,UBERON:0003296,UBERON:0010133,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0000073,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0002368,UBERON:0002616,UBERON:0002780,UBERON:0002530,UBERON:0010317,UBERON:0001017,UBERON:0001016,UBERON:0001890,UBERON:0000949 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010162 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/pituitary%2520gland%2520-%2520adult%252c%2520donor10196.CNhs13805.10180-103C9.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/pituitary%2520gland%2520-%2520adult%252c%2520donor10196.CNhs13805.10180-103C9.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/pituitary%2520gland%2520-%2520adult%252c%2520donor10196.CNhs13805.10180-103C9.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/pituitary%2520gland%2520-%2520adult%252c%2520donor10196.CNhs13805.10180-103C9.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/pituitary%2520gland%2520-%2520adult%252c%2520donor10196.CNhs13805.10180-103C9.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10180-103C9 | |id=FF:10180-103C9 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0010162 | ||
|is_obsolete= | |||
|library_id=CNhs13805 | |||
|library_id_phase_based=2:CNhs13805 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10180 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10180 | |||
|name=pituitary gland - adult, donor10196 | |name=pituitary gland - adult, donor10196 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
Line 44: | Line 63: | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq= | |profile_srnaseq= | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,0.0456885510639547,0,0.172677595576449,0.64931907165384,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.153323010348428,0,0,0,0.488805073159703,0,0.247206226035888,0,0,0.75221354652399,0,0,0,0,0,0,0,0,0,0,0,0,-0.214950770290977,0.158369470489422,0,0,0,0,0,0,0,0.200978578949904,0,0,0,0,0,0.0109039341179751,0,0.438031021215083,0,0,0.247820495090848,0.206006581150341,0,0,0,0,0,0,0,0,0,0,0,0,0.206006581150341,0,0,0,0,0.206006581150341,0,0,0,0,0,0,0.475494575285366,0,0.115710313790014,0.155524345152209,0.461520965424229,0.172582061151972,0.206006581150341,0.103003290575171,0,0.107971229912634,0.476689928502503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274141387881554,0.206006581150341,0,0,-0.0306358713632606,-0.341151452854652,0,0,0.206006581150341,0.103003290575171,0,0 | |||
|repeat_enrich_byname=0,0,0,0,0.107971229912634,0,0,0.206006581150341,0.206006581150341,0.206006581150341,0.345164122303945,0.605825028266788,0,0.206006581150341,0,0,0.203208324839911,0,-0.474086218752008,0.201648979780473,0,0,0.640001009439894,0,0.605825028266788,0,0.441221399627749,0.810413353782508,0.345164122303945,0.810413353782508,0.948928768219192,0.206006581150341,0.0778867141977761,0,0.155594029561026,0.370514981804014,0,0.206006581150341,0,0,0.90334896989935,0.206006581150341,0.185770264515387,0.382042939048108,0,0.206006581150341,0,0,-0.0642340881839836,0,0.545806343981957,0.262443953980528,1.29912310807346,0.00534383092080551,0.159201922257961,0,0,0,-0.0655448439036867,0.0580933451633909,0,0,0.509911434909853,0.528747140819611,0,0,0.494125554751217,1.02984825142148,-0.366348701160039,-0.248868050382253,0,0.104564435097824,0,0,0.450387200125476,0,0,0.206006581150341,0,0.345164122303945,1.15695004637952,0,0,0.218091884905707,0.0181755256249763,0.207629824287982,0,0,0,0.0517387087431564,0.206006581150341,0,-0.373286155956567,-0.06362539533452,0.0710530013839225,-0.156614520029797,0,0.364296100765785,0.106856157014531,0.248842910560008,-0.0286750240113843,0.458423178895649,0.345041662907841,0,0.069763934906453,0.0988975071888402,0.07874946850023,-0.388540327046342,-0.0508721286500381,-0.564722680511407,0.239707002641415,0,0,0,-0.0450871359076365,0,0,0.115710313790014,0.282341015300114,0.128115027172552,0.0794652834492945,0.168828434022564,0.162118573084808,1.28280371249935,0.619035805659684,0.0089083680789614,0.156216413139527,0.0306759180214989,0.450387200125476,0.000986904708671466,-0.0699202549424797,0.218602036169645,-0.409819592028338,0,-0.0335902616855047,0.137662320072973,0.342829187615442,-0.169005327591329,-0.0411084749836426,0,0.206006581150341,-0.233613108567467,0,0,0,0.0478459431135638,0.948928768219192,0.145213021930466,0.536980115526113,-0.232855561555545,0,0.08507058868621,0,0.0056264337808074,0.028304847546755,0.185903578023356,0.00383581953953532,0.277084746157976,-0.0866272234458951,0.0502882199872228,-0.204331661538565,-0.161638486490425,0.041015884811338,0.11262857706595,0.547378201454963,-0.385307811471786,-0.0416948239746278,-0.263776385271786,0.060458419935089,-0.044273923479788,-0.0881268324752877,0.206006581150341,0.170240873613478,-0.0736731033547365,0,-0.177614099521007,0,-0.102476677243598,0,-0.23804810387517,0,-0.344942748209183,-0.54043375147324,0.227396453195012,0.129461803828452,0.00352318704259447,0.253442715178528,0.350054175083581,0,-0.122671371804124,0.126521623050642,0.535023382457688,0.0556394978157015,-0.247308766387107,0.116546462773319,0.189207433958714,0,0.128138292629851,0,0.767580660617003,-0.164263404971302,0.299547344693299,0.345164122303945,-0.00070331279077071,-0.264038791909451,-0.0691926587376067,0.0900355077154068,0.345164122303945,0,0.272518113026783,0.248121457313113,0,-0.60592806381803,0.535023382457688,0.190630029823874,-0.0473197603364149,0.096507358288926,0.892316926318999,0.0281415335292179,0.535023382457688,0.2728594341603,0,0.140550280332385,0,0,-0.146878006023653,0.228536009313812,0,0,0.720056651329793,-0.195265690557764,0,0.0582651277363111,0,0,0.105703372157864,0,0,0.0576797577332937,-0.354833330216448,0,-0.228327847125316,0,0.206006581150341,0,0,0,0.23436104117367,0,0,-0.643402070600484,-0.0674977464250846,-0.12301741567642,0,0.206006581150341,0,0,0.234663797572001,0.00277001905561705,0,-0.131862706497632,0,0,0,0,-0.0861409897892114,0,0,0,0.172582061151972,0.392656743071812,0.252844189582325,0,0,0,0.608215734701061,0.345164122303945,0,0,0.0378903318845175,0.00246664388484308,0,0.206006581150341,0.67818722332912,0,-0.225964409311904,0.368805320578635,0,-0.074843719706834,-1.39238619635869,-0.703795312381674,0,0,0.2736762506678,0,0,0.0826283064805204,0,0.345164122303945,0.255646855761827,0,0,0,0,0,0,0.13084960990419,0,0,0,0,0,0.345164122303945,0,0.206006581150341,0,0,0,0.144006310263415,-0.0922240566585104,0,0,0.206006581150341,0,0,0,0,0.0788972674962675,-0.111826620542655,0,0,0,0,0,0,0.103003290575171,0,0.248630711666551,0,0,0,0,0,0.438031021215083,0,0,0,0,0.848250943182203,0,0,0.173025067931962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221845036268497,0.172677595576449,0,0,0,0,0,0,0,-0.0688267170557497,0,0.450387200125476,0,0,1.63140051856102,0,0,0,-0.104796384789156,0,0.0456885510639547,0,0,0.206006581150341,0,0,0,0,0,0,0,0.535023382457688,0,0,0,0,0,0,0,0,0,0,-0.593728832837288,0,0,0.0031213460192826,0,0,-0.129625062057871,0,0,0,0,0,0,-0.031340424028527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206006581150341,0,0,0,0,0,0,0.068145246770082,0,0,0,0,0,0,0,0.247206226035888,0,0,0.175478881428318,0,0,0,0,0,0,0.239725592281119,0.244885714372984,0.0700742859901638,0,0,0,0.329404757826047,0,0,0.0375954277776972,0,-0.0667773874189013,0,0,0,0,0.103003290575171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.153323010348428,0,0,0,0,0,0,0,0,0,0,0,0.103003290575171,0.103003290575171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.450387200125476,0.172582061151972,0,0,0,0,0,0,0.138570697876556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730394885513869,0,0,0,-0.213086229657044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206006581150341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206006581150341,0,0,0,-0.199422285800054,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157784505911287,0,-0.0843766322300271,0,0,0.345164122303945,0,0,0,0,0,0,0,0,0.450387200125476,0,0,0,0.206006581150341,0.427106103803693,0,0,0,0,0.158369470489422,0,0.103003290575171,0,0,0,0,0,0.215484016331541,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281412774169183,0,0,-0.318028478722954,0,0,0,0,0,0,0,0,0,0,0,0,0.144686402000214,0,0,0,0,0,0,0,0,0,0,0.401957157899807,0,0,0,0.345164122303945,0,0,0,0,0,0,0,0,0.345164122303945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103003290575171,-0.0449757781987773,-0.341151452854652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103003290575171,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375878205214612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257071638485,0,0,0,0,0,0,0,0,0,0,0,-0.0296969223726757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405915804708564,0,0,0,0,0,0,0,0,0,0,0,0.977610146319405,0,0,0,0,0,0,0,0,0,0,0,0.206006581150341,0,0,0,0,0,0,0.85866539503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206006581150341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206006581150341,0,0,0,0,0,0,0,0.206006581150341,0,0,0,0,0,0.342276194612766,0,0,0,0,0,0,0.206006581150341,0,0,0,0.206006581150341,0,0,0,0,0,0,0,0,0,0,0.206006581150341,0,0,0,0,0,0,0.103003290575171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0542331237113365,0,0,0.172582061151972,0,0,0,0,0.0833105841533399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0237397835175619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0317165860483832,0,0,0,0,0,0,0,0,0,0,0,0,0.206006581150341,0,0,0,0,0,0,0,0,0,0,0,0.103003290575171,0,0,0,-0.0797419986649781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247820495090848,0,0.275585351727143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.75221354652399,0,0,0,0,0,0,0,0,0,0,0,0.345164122303945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0499379825215864,0.103003290575171,0,0,0,0,0,0,0,0,0,0.061753199047363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.39683723036089,0,0,0.492735913980572,0,-0.0327994264176813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225193600062738,0,0,0,0.206006581150341,0,0.035243558728078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.074065514172625,0,0.292069822656926,0.551854079697178,0,0,-0.0821118996293936,0.206006581150341,0,0.454130690545347,0,0.450387200125476,0.360030487367389,0.260666295529603,0,0,0,0,0,0,0,0,0,0.206006581150341,0,0,0,0,0.0315648916323312,0.345164122303945,0,0,0.548966082104189,0.180911564530907,0.666685827775698,-0.378836254350424,0,0,0.267058811651658,0,0,0,0.110047173776754 | |||
|rna_box=103 | |rna_box=103 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
Line 57: | Line 79: | ||
|rna_weight_ug=130.08975 | |rna_weight_ug=130.08975 | ||
|sample_age=60 | |sample_age=60 | ||
|sample_category=tissues | |||
|sample_cell_catalog=NA | |sample_cell_catalog=NA | ||
|sample_cell_line= | |sample_cell_line= | ||
Line 69: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;6.97759043547019e-218!GO:0005737;cytoplasm;1.80919631317185e-158!GO:0043226;organelle;2.01975152912156e-148!GO:0043229;intracellular organelle;8.21459600810204e-148!GO:0043227;membrane-bound organelle;2.54586378866804e-144!GO:0043231;intracellular membrane-bound organelle;4.12908542807933e-144!GO:0044444;cytoplasmic part;4.17652474290633e-115!GO:0044422;organelle part;2.27491007641491e-94!GO:0044446;intracellular organelle part;1.23188975742895e-92!GO:0032991;macromolecular complex;2.95318402035261e-74!GO:0030529;ribonucleoprotein complex;5.74096737457026e-60!GO:0003723;RNA binding;2.59322075648768e-57!GO:0005515;protein binding;2.43374155002295e-55!GO:0044238;primary metabolic process;2.41314861395366e-52!GO:0044237;cellular metabolic process;3.26730066228276e-52!GO:0044428;nuclear part;3.748315453515e-52!GO:0015031;protein transport;7.82392356794596e-52!GO:0033036;macromolecule localization;9.03142896928466e-51!GO:0043170;macromolecule metabolic process;1.53841182101586e-50!GO:0043233;organelle lumen;2.8122785573553e-50!GO:0031974;membrane-enclosed lumen;2.8122785573553e-50!GO:0045184;establishment of protein localization;8.25311101963695e-48!GO:0008104;protein localization;5.53938192536908e-47!GO:0005739;mitochondrion;1.88590147505368e-46!GO:0005634;nucleus;4.00403295970247e-45!GO:0016043;cellular component organization and biogenesis;1.03233826162466e-44!GO:0031090;organelle membrane;1.43723022074424e-43!GO:0046907;intracellular transport;4.35710866252812e-40!GO:0006396;RNA processing;1.46222571973428e-38!GO:0043234;protein complex;3.00379707354623e-38!GO:0016071;mRNA metabolic process;4.99556512534425e-36!GO:0006886;intracellular protein transport;7.26991940436989e-34!GO:0005840;ribosome;9.78627181234038e-33!GO:0010467;gene expression;1.12178929016573e-32!GO:0019538;protein metabolic process;1.71243143723322e-32!GO:0008380;RNA splicing;3.54820749403171e-32!GO:0031981;nuclear lumen;1.11976186701794e-31!GO:0044429;mitochondrial part;2.87104790017462e-31!GO:0006397;mRNA processing;5.0205319578672e-31!GO:0051649;establishment of cellular localization;1.00433470038104e-30!GO:0031967;organelle envelope;5.1908552279385e-30!GO:0051641;cellular localization;7.65039460478624e-30!GO:0005829;cytosol;9.82342082024289e-30!GO:0031975;envelope;9.82342082024289e-30!GO:0006412;translation;1.18724246764668e-29!GO:0043283;biopolymer metabolic process;1.37283033727211e-29!GO:0044260;cellular macromolecule metabolic process;3.06592806616506e-28!GO:0044267;cellular protein metabolic process;1.03737248138449e-27!GO:0003735;structural constituent of ribosome;1.44421007672133e-27!GO:0033279;ribosomal subunit;3.34206884646124e-25!GO:0016192;vesicle-mediated transport;6.2293211652938e-25!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.18428928992424e-22!GO:0005654;nucleoplasm;1.57624275187025e-22!GO:0005681;spliceosome;4.33603476783019e-22!GO:0006119;oxidative phosphorylation;9.5109065824473e-22!GO:0005794;Golgi apparatus;1.06204244563613e-21!GO:0065003;macromolecular complex assembly;4.63310784496058e-21!GO:0009059;macromolecule biosynthetic process;1.51668034334464e-20!GO:0019866;organelle inner membrane;2.30739857368517e-20!GO:0044451;nucleoplasm part;2.96968350054426e-20!GO:0005740;mitochondrial envelope;3.75682623846783e-20!GO:0031966;mitochondrial membrane;1.02292876233777e-19!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.24980816255796e-19!GO:0005743;mitochondrial inner membrane;2.17508133554713e-19!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.86725464403842e-19!GO:0009058;biosynthetic process;8.36364184802681e-19!GO:0044249;cellular biosynthetic process;8.94598229442628e-19!GO:0006457;protein folding;2.05150390134781e-18!GO:0012505;endomembrane system;4.28215763233118e-18!GO:0022607;cellular component assembly;7.25789115603277e-18!GO:0000166;nucleotide binding;2.63396880926662e-17!GO:0048193;Golgi vesicle transport;4.40409359918228e-17!GO:0044455;mitochondrial membrane part;6.44747253451775e-17!GO:0006512;ubiquitin cycle;9.60212523214873e-17!GO:0044445;cytosolic part;2.70198347757032e-16!GO:0006996;organelle organization and biogenesis;4.951708630503e-16!GO:0016070;RNA metabolic process;6.01025496479564e-16!GO:0003676;nucleic acid binding;2.23378826827006e-15!GO:0016874;ligase activity;2.72459144644838e-15!GO:0005746;mitochondrial respiratory chain;5.07338557702112e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;5.25628273721325e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;6.05362199986636e-15!GO:0016462;pyrophosphatase activity;6.3494368484195e-15!GO:0006511;ubiquitin-dependent protein catabolic process;7.32696236782109e-15!GO:0031982;vesicle;7.70594271226607e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;1.02944282720107e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.20734817647511e-14!GO:0022618;protein-RNA complex assembly;2.18274596872527e-14!GO:0019941;modification-dependent protein catabolic process;2.18274596872527e-14!GO:0043632;modification-dependent macromolecule catabolic process;2.18274596872527e-14!GO:0048770;pigment granule;2.4185744584308e-14!GO:0042470;melanosome;2.4185744584308e-14!GO:0044257;cellular protein catabolic process;2.77777526217161e-14!GO:0050136;NADH dehydrogenase (quinone) activity;3.01718903919478e-14!GO:0003954;NADH dehydrogenase activity;3.01718903919478e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;3.01718903919478e-14!GO:0031410;cytoplasmic vesicle;3.34935698016169e-14!GO:0017111;nucleoside-triphosphatase activity;3.34935698016169e-14!GO:0044265;cellular macromolecule catabolic process;5.7927166351296e-14!GO:0051082;unfolded protein binding;8.6761718441336e-14!GO:0016604;nuclear body;9.20160060638035e-14!GO:0031980;mitochondrial lumen;1.41926093333649e-13!GO:0005759;mitochondrial matrix;1.41926093333649e-13!GO:0006605;protein targeting;1.92018526969185e-13!GO:0008135;translation factor activity, nucleic acid binding;2.49136128996193e-13!GO:0031988;membrane-bound vesicle;2.84891444618551e-13!GO:0008134;transcription factor binding;3.08540342708691e-13!GO:0015934;large ribosomal subunit;3.77526562437091e-13!GO:0015935;small ribosomal subunit;6.64486225779695e-13!GO:0008565;protein transporter activity;7.71074730995764e-13!GO:0043285;biopolymer catabolic process;8.0768217543296e-13!GO:0016023;cytoplasmic membrane-bound vesicle;1.54187943988769e-12!GO:0016607;nuclear speck;1.71958864371482e-12!GO:0005783;endoplasmic reticulum;1.94526786155497e-12!GO:0030964;NADH dehydrogenase complex (quinone);2.2317630696463e-12!GO:0045271;respiratory chain complex I;2.2317630696463e-12!GO:0005747;mitochondrial respiratory chain complex I;2.2317630696463e-12!GO:0043228;non-membrane-bound organelle;2.27769425335683e-12!GO:0043232;intracellular non-membrane-bound organelle;2.27769425335683e-12!GO:0042775;organelle ATP synthesis coupled electron transport;4.23253299038622e-12!GO:0042773;ATP synthesis coupled electron transport;4.23253299038622e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;6.55224598253329e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.08270433599968e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;2.12192687365265e-11!GO:0000375;RNA splicing, via transesterification reactions;2.12192687365265e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.12192687365265e-11!GO:0031965;nuclear membrane;2.46909367422783e-11!GO:0009057;macromolecule catabolic process;3.59590285584704e-11!GO:0000502;proteasome complex (sensu Eukaryota);4.22752662691687e-11!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;4.60311102748201e-11!GO:0044248;cellular catabolic process;5.43442941748034e-11!GO:0030163;protein catabolic process;6.82305346271716e-11!GO:0032553;ribonucleotide binding;8.70262089743987e-11!GO:0032555;purine ribonucleotide binding;8.70262089743987e-11!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);9.39038047688159e-11!GO:0017076;purine nucleotide binding;1.06689402907317e-10!GO:0045045;secretory pathway;1.26118574186945e-10!GO:0043412;biopolymer modification;1.56021081657449e-10!GO:0005635;nuclear envelope;2.45534000479846e-10!GO:0003743;translation initiation factor activity;2.57449291273762e-10!GO:0043687;post-translational protein modification;9.32888796606723e-10!GO:0051169;nuclear transport;1.04960787544598e-09!GO:0006464;protein modification process;1.39784350052887e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.6650349103671e-09!GO:0005730;nucleolus;1.69129892260694e-09!GO:0048475;coated membrane;2.89186191410158e-09!GO:0030117;membrane coat;2.89186191410158e-09!GO:0044431;Golgi apparatus part;3.29475435534754e-09!GO:0006413;translational initiation;3.38224585720197e-09!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.79391903895774e-09!GO:0006913;nucleocytoplasmic transport;4.35243851490036e-09!GO:0044432;endoplasmic reticulum part;6.02282704161846e-09!GO:0015986;ATP synthesis coupled proton transport;7.21388602140722e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;7.21388602140722e-09!GO:0008639;small protein conjugating enzyme activity;7.72201807265812e-09!GO:0006446;regulation of translational initiation;7.72201807265812e-09!GO:0006888;ER to Golgi vesicle-mediated transport;8.99051675681294e-09!GO:0004842;ubiquitin-protein ligase activity;9.03681847482111e-09!GO:0006259;DNA metabolic process;1.03836741285482e-08!GO:0019829;cation-transporting ATPase activity;1.12742879698376e-08!GO:0005761;mitochondrial ribosome;1.20591409289687e-08!GO:0000313;organellar ribosome;1.20591409289687e-08!GO:0005768;endosome;2.5944161924353e-08!GO:0044453;nuclear membrane part;3.0437307697861e-08!GO:0019787;small conjugating protein ligase activity;3.34349291058785e-08!GO:0051186;cofactor metabolic process;4.63616949828671e-08!GO:0003712;transcription cofactor activity;5.42799396605832e-08!GO:0030120;vesicle coat;6.13291468967213e-08!GO:0030662;coated vesicle membrane;6.13291468967213e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;8.61578406793487e-08!GO:0006461;protein complex assembly;8.64871091568942e-08!GO:0032940;secretion by cell;1.09108068455268e-07!GO:0005643;nuclear pore;1.13567065106402e-07!GO:0003924;GTPase activity;1.23384582659335e-07!GO:0005793;ER-Golgi intermediate compartment;1.55678019960707e-07!GO:0006164;purine nucleotide biosynthetic process;1.56828382215284e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.84560589291123e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.84560589291123e-07!GO:0006163;purine nucleotide metabolic process;1.88487073267627e-07!GO:0009142;nucleoside triphosphate biosynthetic process;2.2065313171373e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.2065313171373e-07!GO:0009152;purine ribonucleotide biosynthetic process;2.3541283637527e-07!GO:0006754;ATP biosynthetic process;2.92898037579646e-07!GO:0006753;nucleoside phosphate metabolic process;2.92898037579646e-07!GO:0016469;proton-transporting two-sector ATPase complex;2.9786820111625e-07!GO:0009150;purine ribonucleotide metabolic process;3.02351169270353e-07!GO:0015078;hydrogen ion transmembrane transporter activity;3.1457017418122e-07!GO:0016887;ATPase activity;3.25150370681564e-07!GO:0005798;Golgi-associated vesicle;3.61418704538558e-07!GO:0006403;RNA localization;3.69092872400721e-07!GO:0050657;nucleic acid transport;4.78224959860735e-07!GO:0051236;establishment of RNA localization;4.78224959860735e-07!GO:0050658;RNA transport;4.78224959860735e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;5.18988219210934e-07!GO:0016564;transcription repressor activity;5.27812059814838e-07!GO:0016881;acid-amino acid ligase activity;5.42710343596499e-07!GO:0009259;ribonucleotide metabolic process;5.98512539329879e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;6.45405716230953e-07!GO:0009144;purine nucleoside triphosphate metabolic process;6.45405716230953e-07!GO:0006732;coenzyme metabolic process;7.01037931663414e-07!GO:0009141;nucleoside triphosphate metabolic process;7.152423359097e-07!GO:0009199;ribonucleoside triphosphate metabolic process;7.2470821714489e-07!GO:0005525;GTP binding;1.04971208208197e-06!GO:0004386;helicase activity;1.08021287001921e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.33548081427848e-06!GO:0000139;Golgi membrane;1.34589448557386e-06!GO:0009260;ribonucleotide biosynthetic process;1.39857512412484e-06!GO:0032559;adenyl ribonucleotide binding;1.63039211277176e-06!GO:0046034;ATP metabolic process;1.66447674506966e-06!GO:0005524;ATP binding;1.67220698535973e-06!GO:0009055;electron carrier activity;1.88024292971499e-06!GO:0030133;transport vesicle;2.03014859983567e-06!GO:0030554;adenyl nucleotide binding;2.16004840518171e-06!GO:0006325;establishment and/or maintenance of chromatin architecture;2.24737773157334e-06!GO:0005789;endoplasmic reticulum membrane;2.26969069267732e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.37893534967518e-06!GO:0042623;ATPase activity, coupled;2.67848862235848e-06!GO:0048471;perinuclear region of cytoplasm;2.67848862235848e-06!GO:0017038;protein import;2.94163219324117e-06!GO:0045333;cellular respiration;3.27322890357368e-06!GO:0009060;aerobic respiration;3.76400743221675e-06!GO:0065002;intracellular protein transport across a membrane;3.83681151526994e-06!GO:0016568;chromatin modification;4.0683223020854e-06!GO:0015630;microtubule cytoskeleton;4.51433789704847e-06!GO:0030135;coated vesicle;4.93222930596493e-06!GO:0006793;phosphorus metabolic process;5.18452252237995e-06!GO:0006796;phosphate metabolic process;5.18452252237995e-06!GO:0009056;catabolic process;5.3083340483782e-06!GO:0006323;DNA packaging;6.13158281743433e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;6.45817997821157e-06!GO:0006613;cotranslational protein targeting to membrane;6.67408312336223e-06!GO:0044440;endosomal part;6.67983208164339e-06!GO:0010008;endosome membrane;6.67983208164339e-06!GO:0048523;negative regulation of cellular process;7.40775228593469e-06!GO:0006366;transcription from RNA polymerase II promoter;7.50181679162718e-06!GO:0000245;spliceosome assembly;8.67833309864074e-06!GO:0045259;proton-transporting ATP synthase complex;8.72835608499048e-06!GO:0032561;guanyl ribonucleotide binding;9.13484917253546e-06!GO:0019001;guanyl nucleotide binding;9.13484917253546e-06!GO:0016044;membrane organization and biogenesis;9.38016723636093e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.29208674662303e-05!GO:0008026;ATP-dependent helicase activity;1.31051222267999e-05!GO:0051028;mRNA transport;1.37650157719491e-05!GO:0030532;small nuclear ribonucleoprotein complex;1.39807646164902e-05!GO:0005770;late endosome;1.43198291789738e-05!GO:0042254;ribosome biogenesis and assembly;1.73148869972825e-05!GO:0005773;vacuole;1.94421183454797e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.18008605802021e-05!GO:0000151;ubiquitin ligase complex;2.18008605802021e-05!GO:0043566;structure-specific DNA binding;2.30605311460545e-05!GO:0032446;protein modification by small protein conjugation;2.50263055165144e-05!GO:0051188;cofactor biosynthetic process;2.75948645868601e-05!GO:0046930;pore complex;2.85411666033162e-05!GO:0003714;transcription corepressor activity;2.93838268440525e-05!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;3.23941366637895e-05!GO:0004812;aminoacyl-tRNA ligase activity;3.23941366637895e-05!GO:0016875;ligase activity, forming carbon-oxygen bonds;3.23941366637895e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;3.60203031418726e-05!GO:0031252;leading edge;3.89322501051793e-05!GO:0016567;protein ubiquitination;4.76746963152533e-05!GO:0006399;tRNA metabolic process;4.83492592644344e-05!GO:0006612;protein targeting to membrane;5.3851620153742e-05!GO:0043038;amino acid activation;5.81066080259006e-05!GO:0006418;tRNA aminoacylation for protein translation;5.81066080259006e-05!GO:0043039;tRNA aminoacylation;5.81066080259006e-05!GO:0009108;coenzyme biosynthetic process;7.31797804945239e-05!GO:0016859;cis-trans isomerase activity;7.84592102404608e-05!GO:0006752;group transfer coenzyme metabolic process;8.10774479347423e-05!GO:0006099;tricarboxylic acid cycle;8.50675896144627e-05!GO:0046356;acetyl-CoA catabolic process;8.50675896144627e-05!GO:0050794;regulation of cellular process;8.9037572440982e-05!GO:0003724;RNA helicase activity;0.000114409588729149!GO:0019899;enzyme binding;0.000122787815195922!GO:0051170;nuclear import;0.00012415052732264!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000133259517995075!GO:0015399;primary active transmembrane transporter activity;0.000133259517995075!GO:0012501;programmed cell death;0.000155813856029769!GO:0006891;intra-Golgi vesicle-mediated transport;0.000158184046688458!GO:0015631;tubulin binding;0.000158974219808148!GO:0048519;negative regulation of biological process;0.000178097741192549!GO:0008654;phospholipid biosynthetic process;0.000183357234634047!GO:0006606;protein import into nucleus;0.000183357234634047!GO:0006084;acetyl-CoA metabolic process;0.000190437342151902!GO:0006915;apoptosis;0.000200601859235038!GO:0003697;single-stranded DNA binding;0.000207044033479334!GO:0008092;cytoskeletal protein binding;0.000233664429741553!GO:0006974;response to DNA damage stimulus;0.000234990643511719!GO:0000323;lytic vacuole;0.000236085475492239!GO:0005764;lysosome;0.000236085475492239!GO:0051168;nuclear export;0.000250263409729088!GO:0051789;response to protein stimulus;0.000256522690139965!GO:0006986;response to unfolded protein;0.000256522690139965!GO:0016310;phosphorylation;0.000293390080069311!GO:0008219;cell death;0.000298436120982502!GO:0016265;death;0.000298436120982502!GO:0005048;signal sequence binding;0.000316839561990015!GO:0009109;coenzyme catabolic process;0.000342569584689649!GO:0031072;heat shock protein binding;0.000349260348935566!GO:0022406;membrane docking;0.000359391089212928!GO:0048278;vesicle docking;0.000359391089212928!GO:0050789;regulation of biological process;0.000393988823382613!GO:0030137;COPI-coated vesicle;0.000407906825661499!GO:0031324;negative regulation of cellular metabolic process;0.000412403178530108!GO:0006414;translational elongation;0.000424348568759312!GO:0005839;proteasome core complex (sensu Eukaryota);0.000439303529083192!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000456047583591893!GO:0030658;transport vesicle membrane;0.000474366906173403!GO:0006892;post-Golgi vesicle-mediated transport;0.000475651643444893!GO:0030118;clathrin coat;0.000506430659951561!GO:0051276;chromosome organization and biogenesis;0.000563812832189328!GO:0009892;negative regulation of metabolic process;0.000563812832189328!GO:0005667;transcription factor complex;0.000593144842812898!GO:0051246;regulation of protein metabolic process;0.000593679563373914!GO:0006904;vesicle docking during exocytosis;0.000616309408939465!GO:0005813;centrosome;0.000620497288414154!GO:0043623;cellular protein complex assembly;0.000647147522180378!GO:0008250;oligosaccharyl transferase complex;0.000676327103227288!GO:0006897;endocytosis;0.000684618270961623!GO:0010324;membrane invagination;0.000684618270961623!GO:0019222;regulation of metabolic process;0.000733245661073027!GO:0005874;microtubule;0.00075995005683219!GO:0004298;threonine endopeptidase activity;0.000782280524620472!GO:0048500;signal recognition particle;0.000795760441619683!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000840118046568527!GO:0008287;protein serine/threonine phosphatase complex;0.000891095241792149!GO:0043069;negative regulation of programmed cell death;0.000895416287585173!GO:0030663;COPI coated vesicle membrane;0.000976889253900651!GO:0030126;COPI vesicle coat;0.000976889253900651!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000988993998047944!GO:0008017;microtubule binding;0.000992573985025832!GO:0003713;transcription coactivator activity;0.00100985713300148!GO:0051187;cofactor catabolic process;0.0010115020290672!GO:0004576;oligosaccharyl transferase activity;0.00101577109154445!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00104708673386386!GO:0006281;DNA repair;0.001049090841889!GO:0005769;early endosome;0.00108182462729366!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00108185615135347!GO:0043021;ribonucleoprotein binding;0.00112677361440963!GO:0043066;negative regulation of apoptosis;0.00116371225528141!GO:0030127;COPII vesicle coat;0.00119217644655084!GO:0012507;ER to Golgi transport vesicle membrane;0.00119217644655084!GO:0022890;inorganic cation transmembrane transporter activity;0.00121652529483145!GO:0030134;ER to Golgi transport vesicle;0.00123278057236199!GO:0016853;isomerase activity;0.00127613817788556!GO:0005905;coated pit;0.00128310513887809!GO:0051920;peroxiredoxin activity;0.00132989082569785!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00140872162978094!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00140872162978094!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00140872162978094!GO:0008186;RNA-dependent ATPase activity;0.00147228622214341!GO:0006916;anti-apoptosis;0.00147228622214341!GO:0005788;endoplasmic reticulum lumen;0.00149394128547977!GO:0007264;small GTPase mediated signal transduction;0.00150841087679337!GO:0043492;ATPase activity, coupled to movement of substances;0.00166716313922107!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00167990790313415!GO:0008361;regulation of cell size;0.00183845802313734!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00185195624326954!GO:0030660;Golgi-associated vesicle membrane;0.0019493953344159!GO:0016481;negative regulation of transcription;0.00200070603886137!GO:0015980;energy derivation by oxidation of organic compounds;0.00210921157846932!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00214188478180396!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00217537094162039!GO:0045047;protein targeting to ER;0.00217537094162039!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.00218436821337909!GO:0003729;mRNA binding;0.00218750033002932!GO:0033116;ER-Golgi intermediate compartment membrane;0.0022303192537999!GO:0005815;microtubule organizing center;0.00242190146872423!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00250069585942661!GO:0000314;organellar small ribosomal subunit;0.00251487632955151!GO:0005763;mitochondrial small ribosomal subunit;0.00251487632955151!GO:0016072;rRNA metabolic process;0.00254147253034703!GO:0006402;mRNA catabolic process;0.00256218662556174!GO:0006364;rRNA processing;0.00256221860673197!GO:0016791;phosphoric monoester hydrolase activity;0.00257573743930735!GO:0016197;endosome transport;0.00268759968065713!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00279358654420959!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00298614909565996!GO:0030867;rough endoplasmic reticulum membrane;0.00300361030053652!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00329260220298651!GO:0016049;cell growth;0.00331146530597826!GO:0012506;vesicle membrane;0.00334985392637405!GO:0051087;chaperone binding;0.00369243825251799!GO:0006333;chromatin assembly or disassembly;0.00371942054308046!GO:0031628;opioid receptor binding;0.00373451733125058!GO:0031852;mu-type opioid receptor binding;0.00373451733125058!GO:0003690;double-stranded DNA binding;0.00377461024263235!GO:0051427;hormone receptor binding;0.00401338963885144!GO:0004004;ATP-dependent RNA helicase activity;0.00415681079457592!GO:0005774;vacuolar membrane;0.00436864726314984!GO:0007005;mitochondrion organization and biogenesis;0.00437229628527648!GO:0006091;generation of precursor metabolites and energy;0.00443825063504378!GO:0008312;7S RNA binding;0.00457594091437619!GO:0001558;regulation of cell growth;0.0046627805036547!GO:0005083;small GTPase regulator activity;0.00471238736308287!GO:0003711;transcription elongation regulator activity;0.00486301780222158!GO:0016363;nuclear matrix;0.00501839066297609!GO:0005885;Arp2/3 protein complex;0.00509338804649724!GO:0006607;NLS-bearing substrate import into nucleus;0.00510952410809956!GO:0033673;negative regulation of kinase activity;0.00531832203303179!GO:0006469;negative regulation of protein kinase activity;0.00531832203303179!GO:0008180;signalosome;0.00548077955586026!GO:0051128;regulation of cellular component organization and biogenesis;0.00570815039102939!GO:0046489;phosphoinositide biosynthetic process;0.0057330872389645!GO:0045786;negative regulation of progression through cell cycle;0.00584471032557792!GO:0046467;membrane lipid biosynthetic process;0.00589931677614329!GO:0031124;mRNA 3'-end processing;0.00602890260724897!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00618985947656303!GO:0005762;mitochondrial large ribosomal subunit;0.00618985947656303!GO:0000315;organellar large ribosomal subunit;0.00618985947656303!GO:0018196;peptidyl-asparagine modification;0.00645108992076068!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00645108992076068!GO:0005791;rough endoplasmic reticulum;0.00662425271224653!GO:0031902;late endosome membrane;0.00679444377809604!GO:0050811;GABA receptor binding;0.00701856954641901!GO:0000059;protein import into nucleus, docking;0.00709727731220775!GO:0035257;nuclear hormone receptor binding;0.00723321632617278!GO:0004721;phosphoprotein phosphatase activity;0.0072411836614819!GO:0009719;response to endogenous stimulus;0.00733160062649777!GO:0046474;glycerophospholipid biosynthetic process;0.00802737517011734!GO:0006383;transcription from RNA polymerase III promoter;0.00802737517011734!GO:0065004;protein-DNA complex assembly;0.00831820079319515!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.00840138329664055!GO:0004667;prostaglandin-D synthase activity;0.00840138329664055!GO:0050802;circadian sleep/wake cycle, sleep;0.00840138329664055!GO:0022410;circadian sleep/wake cycle process;0.00840138329664055!GO:0042749;regulation of circadian sleep/wake cycle;0.00840138329664055!GO:0019783;small conjugating protein-specific protease activity;0.00844992831251746!GO:0006818;hydrogen transport;0.00851382393643627!GO:0008139;nuclear localization sequence binding;0.00869363025027678!GO:0044433;cytoplasmic vesicle part;0.00874322906378516!GO:0006810;transport;0.00906016509202842!GO:0008320;protein transmembrane transporter activity;0.00962099592812885!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00972593022883136!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00972593022883136!GO:0048487;beta-tubulin binding;0.00990455998053997!GO:0008601;protein phosphatase type 2A regulator activity;0.0099655538108789!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0102412067769168!GO:0015992;proton transport;0.0102588790669567!GO:0031123;RNA 3'-end processing;0.0103543829269785!GO:0009117;nucleotide metabolic process;0.0104770098750801!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0105618591863623!GO:0004860;protein kinase inhibitor activity;0.0107617220139318!GO:0006350;transcription;0.0113166328329071!GO:0030384;phosphoinositide metabolic process;0.0114175866510994!GO:0051348;negative regulation of transferase activity;0.0120457361451152!GO:0004221;ubiquitin thiolesterase activity;0.0122112515128154!GO:0016740;transferase activity;0.0123822967711865!GO:0004843;ubiquitin-specific protease activity;0.0124207320930848!GO:0030659;cytoplasmic vesicle membrane;0.0130468488880216!GO:0031323;regulation of cellular metabolic process;0.0131171197498976!GO:0030027;lamellipodium;0.0131171197498976!GO:0003746;translation elongation factor activity;0.0138122646788248!GO:0044437;vacuolar part;0.0138219786874518!GO:0000159;protein phosphatase type 2A complex;0.0141300465036868!GO:0006611;protein export from nucleus;0.0142688147466222!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0143798430377079!GO:0006650;glycerophospholipid metabolic process;0.014793408204773!GO:0016563;transcription activator activity;0.0156600222181919!GO:0030695;GTPase regulator activity;0.0158155199089009!GO:0019867;outer membrane;0.0158280967550032!GO:0030036;actin cytoskeleton organization and biogenesis;0.0160281267214688!GO:0000209;protein polyubiquitination;0.0165989104103997!GO:0005869;dynactin complex;0.0170682932420739!GO:0016311;dephosphorylation;0.0171908447068052!GO:0006401;RNA catabolic process;0.0171975225350783!GO:0001726;ruffle;0.017228520362207!GO:0019887;protein kinase regulator activity;0.0174036695370114!GO:0010468;regulation of gene expression;0.0175290047570394!GO:0016585;chromatin remodeling complex;0.0177007422578501!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0177007422578501!GO:0015002;heme-copper terminal oxidase activity;0.0177007422578501!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0177007422578501!GO:0004129;cytochrome-c oxidase activity;0.0177007422578501!GO:0065007;biological regulation;0.0178340421213483!GO:0008270;zinc ion binding;0.017889981330874!GO:0007049;cell cycle;0.0179975519539722!GO:0031968;organelle outer membrane;0.0180292800420059!GO:0005741;mitochondrial outer membrane;0.0184770098229091!GO:0005938;cell cortex;0.0187054890819454!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0191595460895028!GO:0016615;malate dehydrogenase activity;0.0194432708967925!GO:0030176;integral to endoplasmic reticulum membrane;0.0195934365350271!GO:0046903;secretion;0.0195934365350271!GO:0016272;prefoldin complex;0.0201734651158159!GO:0045892;negative regulation of transcription, DNA-dependent;0.020497189172494!GO:0005875;microtubule associated complex;0.0205384374153119!GO:0043284;biopolymer biosynthetic process;0.0208775668040934!GO:0016050;vesicle organization and biogenesis;0.0209026519903398!GO:0006378;mRNA polyadenylation;0.0209895433119319!GO:0016913;follicle-stimulating hormone activity;0.0230573493581212!GO:0031901;early endosome membrane;0.0234356306438478!GO:0016779;nucleotidyltransferase activity;0.0234356306438478!GO:0016251;general RNA polymerase II transcription factor activity;0.0234356306438478!GO:0006405;RNA export from nucleus;0.0234824619227068!GO:0006376;mRNA splice site selection;0.0235061973280037!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0235061973280037!GO:0031625;ubiquitin protein ligase binding;0.0243656450943897!GO:0019843;rRNA binding;0.0246661875074055!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0250699494679097!GO:0007004;telomere maintenance via telomerase;0.0252666421086795!GO:0051252;regulation of RNA metabolic process;0.0253778042325471!GO:0008154;actin polymerization and/or depolymerization;0.0254584905091026!GO:0030119;AP-type membrane coat adaptor complex;0.0255304515847753!GO:0005765;lysosomal membrane;0.0257055201038685!GO:0008047;enzyme activator activity;0.0258308096786519!GO:0009081;branched chain family amino acid metabolic process;0.026248946896567!GO:0004674;protein serine/threonine kinase activity;0.0264613490123858!GO:0007030;Golgi organization and biogenesis;0.0264613490123858!GO:0048245;eosinophil chemotaxis;0.0265074168660064!GO:0006839;mitochondrial transport;0.0265450420313696!GO:0005868;cytoplasmic dynein complex;0.0267495720391901!GO:0003702;RNA polymerase II transcription factor activity;0.0270587466553097!GO:0006338;chromatin remodeling;0.0272665604329767!GO:0042802;identical protein binding;0.0281261349676266!GO:0045454;cell redox homeostasis;0.0283316651635703!GO:0000049;tRNA binding;0.0293788980093713!GO:0007010;cytoskeleton organization and biogenesis;0.0297599868373516!GO:0017166;vinculin binding;0.029798624302965!GO:0030132;clathrin coat of coated pit;0.0302520821817337!GO:0006352;transcription initiation;0.0315107237384684!GO:0030880;RNA polymerase complex;0.0317039595203498!GO:0051540;metal cluster binding;0.0318913189448645!GO:0051536;iron-sulfur cluster binding;0.0318913189448645!GO:0030521;androgen receptor signaling pathway;0.0322545854812177!GO:0030140;trans-Golgi network transport vesicle;0.0325264844870977!GO:0051287;NAD binding;0.0328377399306463!GO:0006108;malate metabolic process;0.0337241357210254!GO:0006497;protein amino acid lipidation;0.033779740376748!GO:0008286;insulin receptor signaling pathway;0.033779740376748!GO:0030125;clathrin vesicle coat;0.0350469024350561!GO:0030665;clathrin coated vesicle membrane;0.0350469024350561!GO:0030029;actin filament-based process;0.0361090549114195!GO:0030136;clathrin-coated vesicle;0.0361090549114195!GO:0040029;regulation of gene expression, epigenetic;0.0367111934123676!GO:0016787;hydrolase activity;0.0367935692162675!GO:0019210;kinase inhibitor activity;0.0369130593282437!GO:0005684;U2-dependent spliceosome;0.0371854082543982!GO:0043488;regulation of mRNA stability;0.0372779854530072!GO:0043487;regulation of RNA stability;0.0372779854530072!GO:0030131;clathrin adaptor complex;0.0382086868115753!GO:0043681;protein import into mitochondrion;0.0384414923019709!GO:0042158;lipoprotein biosynthetic process;0.0406278657054171!GO:0000339;RNA cap binding;0.0408756727020773!GO:0006470;protein amino acid dephosphorylation;0.0412788992153438!GO:0016790;thiolester hydrolase activity;0.0424463303639!GO:0008097;5S rRNA binding;0.0429428948666574!GO:0007243;protein kinase cascade;0.0432331048711084!GO:0016579;protein deubiquitination;0.0436054720830433!GO:0031371;ubiquitin conjugating enzyme complex;0.0448483144439416!GO:0005832;chaperonin-containing T-complex;0.0451485602730709!GO:0032200;telomere organization and biogenesis;0.0462651486006357!GO:0000723;telomere maintenance;0.0462651486006357!GO:0016301;kinase activity;0.0462651486006357!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0464381889359409!GO:0048489;synaptic vesicle transport;0.0468271760289776!GO:0009165;nucleotide biosynthetic process;0.0469287265550406!GO:0006595;polyamine metabolic process;0.0471135870325591!GO:0051539;4 iron, 4 sulfur cluster binding;0.0480496968538528!GO:0019207;kinase regulator activity;0.0480996830677395!GO:0008022;protein C-terminus binding;0.0493474772874802 | |||
|sample_id=10180 | |sample_id=10180 | ||
|sample_note= | |sample_note= | ||
Line 76: | Line 100: | ||
|sample_tissue=pituitary gland | |sample_tissue=pituitary gland | ||
|top_motifs=RFX1:3.50377996178;LHX3,4:3.44258808165;ALX1:3.33206867987;POU6F1:2.72396209933;RFX2..5_RFXANK_RFXAP:2.47661433186;ADNP_IRX_SIX_ZHX:2.37651977111;ATF6:2.33211812166;AIRE:2.257639025;FOXP3:2.05444961297;ATF2:2.04428374357;FOXN1:2.00936720316;POU1F1:1.95980234543;AR:1.89126607717;REST:1.83600135169;NRF1:1.8161414488;RREB1:1.65188367378;ONECUT1,2:1.64531052261;SNAI1..3:1.6442454742;MYOD1:1.61187214216;CREB1:1.51652948646;MYFfamily:1.50991523852;MAFB:1.50708077652;ZEB1:1.4513392871;GATA4:1.42193646257;CUX2:1.40975042612;FOXA2:1.40432624956;PAX1,9:1.40017817851;TGIF1:1.3830337221;HIF1A:1.38044843057;SREBF1,2:1.36823609707;LMO2:1.3452330938;AHR_ARNT_ARNT2:1.33590867249;JUN:1.30216753226;TEF:1.23369791128;XBP1:1.1893255708;NHLH1,2:1.17173189036;GCM1,2:1.1350271866;ATF4:1.10074114663;HMGA1,2:1.0842785572;ARID5B:1.07585207764;BPTF:1.06854352767;HOX{A6,A7,B6,B7}:1.05811866153;NKX3-2:1.03079159341;FOX{D1,D2}:1.00788179533;PRDM1:1.00262188064;HAND1,2:0.989538343004;EP300:0.970463524633;EGR1..3:0.961817557248;ZFP161:0.951109833056;TBX4,5:0.949989478782;NKX2-3_NKX2-5:0.923475336283;MTF1:0.918394745339;NANOG:0.915915221355;YY1:0.892954608045;MED-1{core}:0.880030127401;HMX1:0.87552963238;NKX6-1,2:0.863867148807;ESRRA:0.860461277868;PAX4:0.854475582291;PRRX1,2:0.843566373027;HIC1:0.807598500892;TLX2:0.79860127023;ZNF143:0.791778573801;GFI1B:0.773607404061;MAZ:0.702585492901;ATF5_CREB3:0.698672693604;PAX6:0.698286652533;GTF2I:0.678664046844;ELK1,4_GABP{A,B1}:0.669612353055;ZIC1..3:0.62518972214;SP1:0.614767576219;PATZ1:0.574533018068;ZBTB6:0.535631483464;HOX{A4,D4}:0.529312436539;HOXA9_MEIS1:0.508028105475;STAT1,3:0.503424579567;KLF4:0.503321507704;EVI1:0.497828361297;STAT2,4,6:0.49121125902;POU3F1..4:0.440068012145;SOX17:0.421883411121;MZF1:0.411015858123;IKZF2:0.409836500541;TBP:0.394667507573;GFI1:0.389390254944;VSX1,2:0.382243562035;IRF7:0.38015435168;PAX5:0.374159411024;SMAD1..7,9:0.371818612773;NFIX:0.352467535769;MTE{core}:0.321865150962;SOX5:0.288488041874;DBP:0.286329573724;ZBTB16:0.270565820216;CDC5L:0.270478943635;NFIL3:0.268926911697;NR3C1:0.265395963307;TFAP2B:0.249344266908;NR1H4:0.240684791173;LEF1_TCF7_TCF7L1,2:0.229471955144;MEF2{A,B,C,D}:0.19717909577;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.164798926515;PITX1..3:0.164721711609;RBPJ:0.138773385021;OCT4_SOX2{dimer}:0.114528701117;FOX{F1,F2,J1}:0.0990219424086;FOXQ1:0.0937497240633;BREu{core}:0.0797324268502;FOXP1:0.0721763467396;PDX1:0.055346484309;PAX8:0.0446773722261;CDX1,2,4:0.0421827605111;FOXM1:0.0295846423941;SOX{8,9,10}:0.018192872644;FOXD3:0.0175836585382;RORA:0.0151744045582;TOPORS:0.0145815728135;ZNF423:0.00860380520507;TAL1_TCF{3,4,12}:0.000585040423519;IKZF1:-0.0279924385538;CEBPA,B_DDIT3:-0.092784870159;MYBL2:-0.110143785234;NFE2L1:-0.114312059835;CRX:-0.125369878473;FOX{I1,J2}:-0.137812711883;PAX3,7:-0.158959077504;IRF1,2:-0.17651068925;GATA6:-0.202530406437;SPIB:-0.243108955523;PBX1:-0.254539354827;SOX2:-0.2647916932;EBF1:-0.272549014493;FOXO1,3,4:-0.282560407167;NKX2-1,4:-0.285088953466;ELF1,2,4:-0.285558631896;GLI1..3:-0.294801963204;SPZ1:-0.296400781818;NFY{A,B,C}:-0.297276226154;HBP1_HMGB_SSRP1_UBTF:-0.302028890332;HNF1A:-0.309091475641;ALX4:-0.309402933599;TLX1..3_NFIC{dimer}:-0.311814775691;ZNF238:-0.344167262978;NKX3-1:-0.404107854908;NFE2:-0.432718787838;TEAD1:-0.432864472777;FOSL2:-0.445601162515;NANOG{mouse}:-0.456987375562;PAX2:-0.491673202881;ZNF384:-0.502373011165;ETS1,2:-0.516072178541;UFEwm:-0.524217483303;DMAP1_NCOR{1,2}_SMARC:-0.537185180144;SPI1:-0.537374279364;TFAP4:-0.566663554275;BACH2:-0.568012726676;HSF1,2:-0.600044086855;PPARG:-0.618072127815;FOS_FOS{B,L1}_JUN{B,D}:-0.67887540972;NR6A1:-0.697561472751;HLF:-0.70531156432;GZF1:-0.718270434087;TP53:-0.723228306617;POU2F1..3:-0.748088855712;XCPE1{core}:-0.748635164746;RXRA_VDR{dimer}:-0.760479828445;GTF2A1,2:-0.760963458638;NR5A1,2:-0.778847774527;NFATC1..3:-0.819002832854;NFKB1_REL_RELA:-0.822910623893;NFE2L2:-0.857056491193;MYB:-0.863018937184;TFAP2{A,C}:-0.879886878058;HNF4A_NR2F1,2:-0.888338148401;RUNX1..3:-0.91725171879;HOX{A5,B5}:-0.938431525722;TFCP2:-1.03651592612;ESR1:-1.0368461614;TFDP1:-1.04054834926;FOXL1:-1.06981392956;T:-1.07164100554;bHLH_family:-1.07751983804;RXR{A,B,G}:-1.15771406362;POU5F1:-1.21897710659;E2F1..5:-1.32957529129;SRF:-1.35597912393;STAT5{A,B}:-1.39562832554;EN1,2:-1.43656120757;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.56640441235;ZNF148:-1.61245466233;NKX2-2,8:-1.80035370656;HES1:-2.24848063024 | |top_motifs=RFX1:3.50377996178;LHX3,4:3.44258808165;ALX1:3.33206867987;POU6F1:2.72396209933;RFX2..5_RFXANK_RFXAP:2.47661433186;ADNP_IRX_SIX_ZHX:2.37651977111;ATF6:2.33211812166;AIRE:2.257639025;FOXP3:2.05444961297;ATF2:2.04428374357;FOXN1:2.00936720316;POU1F1:1.95980234543;AR:1.89126607717;REST:1.83600135169;NRF1:1.8161414488;RREB1:1.65188367378;ONECUT1,2:1.64531052261;SNAI1..3:1.6442454742;MYOD1:1.61187214216;CREB1:1.51652948646;MYFfamily:1.50991523852;MAFB:1.50708077652;ZEB1:1.4513392871;GATA4:1.42193646257;CUX2:1.40975042612;FOXA2:1.40432624956;PAX1,9:1.40017817851;TGIF1:1.3830337221;HIF1A:1.38044843057;SREBF1,2:1.36823609707;LMO2:1.3452330938;AHR_ARNT_ARNT2:1.33590867249;JUN:1.30216753226;TEF:1.23369791128;XBP1:1.1893255708;NHLH1,2:1.17173189036;GCM1,2:1.1350271866;ATF4:1.10074114663;HMGA1,2:1.0842785572;ARID5B:1.07585207764;BPTF:1.06854352767;HOX{A6,A7,B6,B7}:1.05811866153;NKX3-2:1.03079159341;FOX{D1,D2}:1.00788179533;PRDM1:1.00262188064;HAND1,2:0.989538343004;EP300:0.970463524633;EGR1..3:0.961817557248;ZFP161:0.951109833056;TBX4,5:0.949989478782;NKX2-3_NKX2-5:0.923475336283;MTF1:0.918394745339;NANOG:0.915915221355;YY1:0.892954608045;MED-1{core}:0.880030127401;HMX1:0.87552963238;NKX6-1,2:0.863867148807;ESRRA:0.860461277868;PAX4:0.854475582291;PRRX1,2:0.843566373027;HIC1:0.807598500892;TLX2:0.79860127023;ZNF143:0.791778573801;GFI1B:0.773607404061;MAZ:0.702585492901;ATF5_CREB3:0.698672693604;PAX6:0.698286652533;GTF2I:0.678664046844;ELK1,4_GABP{A,B1}:0.669612353055;ZIC1..3:0.62518972214;SP1:0.614767576219;PATZ1:0.574533018068;ZBTB6:0.535631483464;HOX{A4,D4}:0.529312436539;HOXA9_MEIS1:0.508028105475;STAT1,3:0.503424579567;KLF4:0.503321507704;EVI1:0.497828361297;STAT2,4,6:0.49121125902;POU3F1..4:0.440068012145;SOX17:0.421883411121;MZF1:0.411015858123;IKZF2:0.409836500541;TBP:0.394667507573;GFI1:0.389390254944;VSX1,2:0.382243562035;IRF7:0.38015435168;PAX5:0.374159411024;SMAD1..7,9:0.371818612773;NFIX:0.352467535769;MTE{core}:0.321865150962;SOX5:0.288488041874;DBP:0.286329573724;ZBTB16:0.270565820216;CDC5L:0.270478943635;NFIL3:0.268926911697;NR3C1:0.265395963307;TFAP2B:0.249344266908;NR1H4:0.240684791173;LEF1_TCF7_TCF7L1,2:0.229471955144;MEF2{A,B,C,D}:0.19717909577;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.164798926515;PITX1..3:0.164721711609;RBPJ:0.138773385021;OCT4_SOX2{dimer}:0.114528701117;FOX{F1,F2,J1}:0.0990219424086;FOXQ1:0.0937497240633;BREu{core}:0.0797324268502;FOXP1:0.0721763467396;PDX1:0.055346484309;PAX8:0.0446773722261;CDX1,2,4:0.0421827605111;FOXM1:0.0295846423941;SOX{8,9,10}:0.018192872644;FOXD3:0.0175836585382;RORA:0.0151744045582;TOPORS:0.0145815728135;ZNF423:0.00860380520507;TAL1_TCF{3,4,12}:0.000585040423519;IKZF1:-0.0279924385538;CEBPA,B_DDIT3:-0.092784870159;MYBL2:-0.110143785234;NFE2L1:-0.114312059835;CRX:-0.125369878473;FOX{I1,J2}:-0.137812711883;PAX3,7:-0.158959077504;IRF1,2:-0.17651068925;GATA6:-0.202530406437;SPIB:-0.243108955523;PBX1:-0.254539354827;SOX2:-0.2647916932;EBF1:-0.272549014493;FOXO1,3,4:-0.282560407167;NKX2-1,4:-0.285088953466;ELF1,2,4:-0.285558631896;GLI1..3:-0.294801963204;SPZ1:-0.296400781818;NFY{A,B,C}:-0.297276226154;HBP1_HMGB_SSRP1_UBTF:-0.302028890332;HNF1A:-0.309091475641;ALX4:-0.309402933599;TLX1..3_NFIC{dimer}:-0.311814775691;ZNF238:-0.344167262978;NKX3-1:-0.404107854908;NFE2:-0.432718787838;TEAD1:-0.432864472777;FOSL2:-0.445601162515;NANOG{mouse}:-0.456987375562;PAX2:-0.491673202881;ZNF384:-0.502373011165;ETS1,2:-0.516072178541;UFEwm:-0.524217483303;DMAP1_NCOR{1,2}_SMARC:-0.537185180144;SPI1:-0.537374279364;TFAP4:-0.566663554275;BACH2:-0.568012726676;HSF1,2:-0.600044086855;PPARG:-0.618072127815;FOS_FOS{B,L1}_JUN{B,D}:-0.67887540972;NR6A1:-0.697561472751;HLF:-0.70531156432;GZF1:-0.718270434087;TP53:-0.723228306617;POU2F1..3:-0.748088855712;XCPE1{core}:-0.748635164746;RXRA_VDR{dimer}:-0.760479828445;GTF2A1,2:-0.760963458638;NR5A1,2:-0.778847774527;NFATC1..3:-0.819002832854;NFKB1_REL_RELA:-0.822910623893;NFE2L2:-0.857056491193;MYB:-0.863018937184;TFAP2{A,C}:-0.879886878058;HNF4A_NR2F1,2:-0.888338148401;RUNX1..3:-0.91725171879;HOX{A5,B5}:-0.938431525722;TFCP2:-1.03651592612;ESR1:-1.0368461614;TFDP1:-1.04054834926;FOXL1:-1.06981392956;T:-1.07164100554;bHLH_family:-1.07751983804;RXR{A,B,G}:-1.15771406362;POU5F1:-1.21897710659;E2F1..5:-1.32957529129;SRF:-1.35597912393;STAT5{A,B}:-1.39562832554;EN1,2:-1.43656120757;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.56640441235;ZNF148:-1.61245466233;NKX2-2,8:-1.80035370656;HES1:-2.24848063024 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10180-103C9;search_select_hide=table117:FF:10180-103C9 | |||
}} | }} |
Latest revision as of 12:25, 3 June 2020
Name: | pituitary gland - adult, donor10196 |
---|---|
Species: | Human (Homo sapiens) |
Library ID: | CNhs13805 |
Sample type: | tissues |
Genomic View: | UCSC |
RefEX: | Specific genes |
FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8 |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
|
CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Download raw sequence, BAM & CTSS | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13805
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13805
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.142 |
10 | 10 | 0.0569 |
100 | 100 | 0.545 |
101 | 101 | 0.765 |
102 | 102 | 0.922 |
103 | 103 | 0.123 |
104 | 104 | 0.382 |
105 | 105 | 0.419 |
106 | 106 | 3.98295e-4 |
107 | 107 | 0.0147 |
108 | 108 | 0.733 |
109 | 109 | 0.025 |
11 | 11 | 0.0428 |
110 | 110 | 0.137 |
111 | 111 | 0.188 |
112 | 112 | 0.778 |
113 | 113 | 0.361 |
114 | 114 | 0.247 |
115 | 115 | 0.964 |
116 | 116 | 0.0836 |
117 | 117 | 0.0806 |
118 | 118 | 0.268 |
119 | 119 | 0.129 |
12 | 12 | 0.982 |
120 | 120 | 0.162 |
121 | 121 | 0.735 |
122 | 122 | 0.592 |
123 | 123 | 0.466 |
124 | 124 | 0.925 |
125 | 125 | 0.26 |
126 | 126 | 0.19 |
127 | 127 | 0.357 |
128 | 128 | 0.0444 |
129 | 129 | 0.229 |
13 | 13 | 0.00818 |
130 | 130 | 0.103 |
131 | 131 | 0.167 |
132 | 132 | 0.777 |
133 | 133 | 0.0114 |
134 | 134 | 0.558 |
135 | 135 | 0.042 |
136 | 136 | 0.167 |
137 | 137 | 0.0181 |
138 | 138 | 0.759 |
139 | 139 | 0.683 |
14 | 14 | 0.996 |
140 | 140 | 0.742 |
141 | 141 | 0.955 |
142 | 142 | 0.934 |
143 | 143 | 0.0604 |
144 | 144 | 0.564 |
145 | 145 | 0.0913 |
146 | 146 | 0.221 |
147 | 147 | 0.802 |
148 | 148 | 0.0446 |
149 | 149 | 0.204 |
15 | 15 | 0.13 |
150 | 150 | 0.132 |
151 | 151 | 0.465 |
152 | 152 | 0.0246 |
153 | 153 | 0.852 |
154 | 154 | 0.914 |
155 | 155 | 0.755 |
156 | 156 | 0.464 |
157 | 157 | 0.326 |
158 | 158 | 0.0501 |
159 | 159 | 0.0149 |
16 | 16 | 0.163 |
160 | 160 | 0.0353 |
161 | 161 | 0.39 |
162 | 162 | 0.836 |
163 | 163 | 0.833 |
164 | 164 | 0.189 |
165 | 165 | 0.21 |
166 | 166 | 0.752 |
167 | 167 | 0.763 |
168 | 168 | 0.0597 |
169 | 169 | 0.00402 |
17 | 17 | 0.0648 |
18 | 18 | 0.11 |
19 | 19 | 0.139 |
2 | 2 | 0.517 |
20 | 20 | 0.747 |
21 | 21 | 0.0382 |
22 | 22 | 0.0493 |
23 | 23 | 0.0271 |
24 | 24 | 0.0678 |
25 | 25 | 0.699 |
26 | 26 | 0.0012 |
27 | 27 | 0.559 |
28 | 28 | 0.737 |
29 | 29 | 0.049 |
3 | 3 | 0.117 |
30 | 30 | 0.894 |
31 | 31 | 0.862 |
32 | 32 | 0.018 |
33 | 33 | 0.109 |
34 | 34 | 0.374 |
35 | 35 | 0.774 |
36 | 36 | 0.216 |
37 | 37 | 0.101 |
38 | 38 | 0.158 |
39 | 39 | 0.13 |
4 | 4 | 0.922 |
40 | 40 | 0.103 |
41 | 41 | 0.257 |
42 | 42 | 0.493 |
43 | 43 | 0.0913 |
44 | 44 | 0.262 |
45 | 45 | 0.455 |
46 | 46 | 0.0734 |
47 | 47 | 0.199 |
48 | 48 | 0.103 |
49 | 49 | 0.121 |
5 | 5 | 0.345 |
50 | 50 | 0.203 |
51 | 51 | 0.347 |
52 | 52 | 0.112 |
53 | 53 | 0.565 |
54 | 54 | 0.351 |
55 | 55 | 0.616 |
56 | 56 | 0.693 |
57 | 57 | 0.27 |
58 | 58 | 0.629 |
59 | 59 | 0.0184 |
6 | 6 | 0.409 |
60 | 60 | 0.0167 |
61 | 61 | 0.207 |
62 | 62 | 0.157 |
63 | 63 | 0.0394 |
64 | 64 | 0.272 |
65 | 65 | 0.0604 |
66 | 66 | 0.142 |
67 | 67 | 0.46 |
68 | 68 | 0.391 |
69 | 69 | 0.284 |
7 | 7 | 0.121 |
70 | 70 | 0.206 |
71 | 71 | 0.0426 |
72 | 72 | 0.956 |
73 | 73 | 0.0524 |
74 | 74 | 0.598 |
75 | 75 | 0.0997 |
76 | 76 | 0.769 |
77 | 77 | 0.0971 |
78 | 78 | 0.0228 |
79 | 79 | 0.71 |
8 | 8 | 0.0573 |
80 | 80 | 0.716 |
81 | 81 | 0.32 |
82 | 82 | 0.56 |
83 | 83 | 0.0457 |
84 | 84 | 0.366 |
85 | 85 | 0.165 |
86 | 86 | 0.218 |
87 | 87 | 5.59295e-4 |
88 | 88 | 0.41 |
89 | 89 | 0.579 |
9 | 9 | 0.239 |
90 | 90 | 0.344 |
91 | 91 | 0.639 |
92 | 92 | 0.761 |
93 | 93 | 0.534 |
94 | 94 | 0.284 |
95 | 95 | 0.11 |
96 | 96 | 0.496 |
97 | 97 | 0.842 |
98 | 98 | 0.601 |
99 | 99 | 0.281 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13805
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000955 (brain)
0000007 (pituitary gland)
0001894 (diencephalon)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0003296 (gland of diencephalon)
0010133 (neuroendocrine gland)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0000073 (regional part of nervous system)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002368 (endocrine gland)
0002616 (regional part of brain)
0002780 (regional part of forebrain)
0002530 (gland)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)
0001890 (forebrain)
0000949 (endocrine system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010162 (human pituitary gland - adult sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0010316 (germ layer / neural crest)