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{{f5samples
{{f5samples
|id=FF:10643-109A4
|DRA_sample_Accession=CAGE@SAMD00005162
|name=endometrioid adenocarcinoma cell line:JHUEM-1
|accession_numbers=CAGE;DRX007878;DRR008750;DRZ000175;DRZ001560;DRZ011525;DRZ012910
|sample_id=10643
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000995,UBERON:0002384,UBERON:0003134,UBERON:0000479,UBERON:0005156,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003133,UBERON:0003975,UBERON:0004175,UBERON:0010317,UBERON:0003100,UBERON:0000474
|rna_tube_id=109A4
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002320,CL:0000066,CL:0002371,CL:0000499,CL:0000255,CL:0002076,CL:0002149,CL:0002255
|rna_box=109
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:14566,DOID:0050687,DOID:193,DOID:305,DOID:120,DOID:299,DOID:3001
|rna_position=A4
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100297,FF:0101120,FF:0100167,FF:0100658,FF:0101555
|sample_cell_lot=
|comment=
|sample_cell_catalog=RCB1548
|created_by=
|sample_company=RIKEN Bioresource centre
|creation_date=
|rna_lot_number=
|data_phase=2
|rna_catalog_number=
|datafreeze_phase=2
|sample_species=Human (Homo sapiens)
|def=
|sample_strain=
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3544..149363583,-!p3@NR3C2!0.17!0.69!NR3C2;;chr15:42749346..42749359,-!p7@ZFP106!0.17!0.69!ZFP106;;chr5:137801160..137801176,+!p1@EGR1!0.16!131.56!EGR1;;chrX:53254373..53254406,-!p1@KDM5C!0.16!47.56!KDM5C;;chr15:35280439..35280503,-!p1@ZNF770!0.16!44.60!ZNF770;;chr17:42298201..42298284,-!p1@UBTF!0.16!21.00!UBTF;;chr2:85198231..85198305,+!p1@KCMF1!0.16!16.84!KCMF1;;chr19:9695195..9695221,-!p2@ZNF121!0.16!14.41!ZNF121;;chr10:3827371..3827386,-!p2@KLF6!0.16!10.24!KLF6;;chr2:85360499..85360598,+!p1@TCF7L1!0.16!6.60!TCF7L1;;chr13:45151434..45151507,-!p3@TSC22D1!0.16!6.42!TSC22D1;;chr12:72058130..72058189,+!p2@THAP2!0.16!4.86!THAP2;;chr19:53466095..53466149,-!p1@ZNF321P,p1@ZNF816-ZNF321P,p1@ZNF816!0.16!4.69!ZNF816;;chr1:153940354..153940395,+!p1@CREB3L4!0.16!4.51!CREB3L4;;chr8:128750654..128750793,+!p3@MYC!0.16!4.51!MYC;;chr19:2900917..2900981,+!p1@ZNF57!0.16!4.34!ZNF57;;chr4:41992565..41992580,+!p2@SLC30A9!0.16!3.99!SLC30A9;;chr20:46130602..46130613,+!p3@NCOA3!0.16!2.95!NCOA3;;chr19:8942962..8942987,-!p1@ZNF558!0.16!2.78!ZNF558;;chr2:74375081..74375092,-!p2@BOLA3!0.16!1.91!BOLA3;;chr3:185826814..185826825,-!p3@ETV5!0.16!1.56!ETV5;;chr1:35656352..35656383,-!p7@SFPQ!0.16!1.39!SFPQ;;chr12:66218212..66218244,+!p5@HMGA2!0.16!1.04!HMGA2;;chr18:19749386..19749404,+!p2@GATA6!0.16!1.04!GATA6;;chr7:100076873..100076880,-!p6@TSC22D4!0.16!0.69!TSC22D4;;chr7:28725715..28725727,+!p3@CREB5!0.16!0.69!CREB5;;chr8:128752734..128752763,+!p13@MYC!0.16!0.69!MYC;;chr6:34204642..34204664,+!p2@HMGA1!0.15!172.69!HMGA1;;chr1:8938766..8938774,-!p2@ENO1!0.15!87.47!ENO1;;chr13:114238997..114239077,+!p1@TFDP1!0.15!64.22!TFDP1;;chr17:61920280..61920343,-!p2@SMARCD2!0.15!11.80!SMARCD2;;chr9:139294614..139294633,-!p@chr9:139294614..139294633,-!0.15!7.29!SNAPC4;;chr19:20748574..20748599,-!p1@ZNF737!0.15!6.94!ZNF737;;chr7:64838786..64838809,+!p2@ZNF92!0.15!6.60!ZNF92;;chr11:65667884..65667895,-!p2@FOSL1!0.15!4.17!FOSL1;;chr12:3069037..3069119,+!p2@TEAD4!0.15!3.64!TEAD4;;chr19:52430697..52430749,+!p1@ZNF613!0.15!2.26!ZNF613;;chr19:37341160..37341194,-!p2@ZNF790!0.15!1.91!ZNF790;;chr2:46524506..46524514,+!p5@EPAS1!0.15!1.56!EPAS1;;chr2:74375058..74375069,-!p3@BOLA3!0.15!1.56!BOLA3;;chr13:46543725..46543747,-!p2@ZC3H13!0.15!1.56!ZC3H13;;chr21:34143999..34144016,-!p4@GCFC1!0.15!1.39!GCFC1;;chr1:203764633..203764674,+!p2@ZC3H11A!0.15!1.21!ZC3H11A;;chr11:3400442..3400453,-!p2@ZNF195!0.15!1.21!ZNF195;;chr17:47439354..47439383,-!p3@ZNF652!0.15!1.21!ZNF652;;chr2:166326200..166326216,+!p1@CSRNP3!0.15!1.04!CSRNP3;;chr2:46602901..46602926,+!p7@EPAS1!0.15!0.87!EPAS1;;chr3:14988878..14988903,+!p7@NR2C2!0.15!0.87!NR2C2;;chr1:6640110..6640130,+!p2@ZBTB48!0.15!0.87!ZBTB48;;chr15:35280509..35280520,-!p2@ZNF770!0.15!0.87!ZNF770;;chr18:3448390..3448411,+!p14@TGIF1!0.15!0.87!TGIF1;;chr6:21597283..21597312,+!p7@SOX4!0.15!0.87!SOX4;;chr6:15245797..15245818,+!p8@JARID2!0.15!0.69!JARID2;;chr7:17369649..17369664,+!p4@AHR!0.15!0.69!AHR;;chr8:128752850..128752874,+!p12@MYC!0.15!0.69!MYC;;chr8:81398511..81398523,+!p8@ZBTB10!0.15!0.69!ZBTB10;;chr9:16870659..16870675,-!p2@BNC2!0.15!0.69!BNC2;;chr11:19263192..19263222,-!p2@E2F8!0.15!0.69!E2F8;;chr13:41556186..41556208,-!p12@ELF1!0.15!0.69!ELF1;;chr19:24216327..24216345,+!p5@ZNF254!0.15!0.69!ZNF254;;chr19:9785710..9785721,-!p3@ZNF562!0.15!0.69!ZNF562;;chr20:46130846..46130869,+!p5@NCOA3!0.15!0.52!NCOA3;;chr6:41555169..41555196,+!p6@FOXP4!0.15!0.52!FOXP4;;chr10:63851669..63851682,+!p10@ARID5B!0.15!0.52!ARID5B;;chr2:74374995..74375055,-!p1@BOLA3!0.14!55.89!BOLA3;;chr13:20357063..20357105,-!p1@PSPC1!0.14!40.44!PSPC1;;chr19:9731872..9731915,-!p1@ZNF561!0.14!15.45!ZNF561;;chr6:144329384..144329405,-!p1@PLAGL1!0.14!13.88!PLAGL1;;chr10:3827417..3827428,-!p3@KLF6!0.14!10.07!KLF6;;chr11:67007548..67007610,+!p3@KDM2A!0.14!8.50!KDM2A;;chr15:67357924..67357952,+!p2@SMAD3!0.14!7.64!SMAD3;;chr1:47779762..47779827,-!p1@STIL,p1@TAL1!0.14!4.86!TAL1;;chr19:56135928..56135936,-!p1@ZNF784!0.14!3.99!ZNF784;;chr19:12721616..12721640,-!p2@ZNF490!0.14!3.47!ZNF490;;chr8:145669791..145669834,-!p1@TONSL!0.14!2.78!TONSL;;chr22:20748456..20748488,+!p2@ZNF74!0.14!2.43!ZNF74;;chr1:35657108..35657135,-!p5@SFPQ!0.14!1.56!SFPQ;;chr12:53853054..53853092,+!p6@PCBP2!0.14!1.56!PCBP2;;chr12:124457725..124457736,+!p2@ZNF664!0.14!1.39!ZNF664;;chr18:19749517..19749531,+!p3@GATA6!0.14!1.39!GATA6;;chr3:44666503..44666516,+!p3@ZNF197!0.14!1.39!ZNF197;;chr1:10754477..10754517,-!p1@CASZ1!0.14!1.21!CASZ1;;chr8:73921136..73921151,+!p2@TERF1!0.14!1.04!TERF1;;chr4:331619..331630,+!p2@ZNF141!0.14!1.04!ZNF141;;chr4:87967965..87967983,+!p16@AFF1!0.14!0.87!AFF1;;chr19:50435736..50435781,+!p3@ATF5!0.14!0.87!ATF5;;chr11:19262486..19262512,-!p4@E2F8!0.14!0.69!E2F8;;chr13:46543859..46543881,-!p10@ZC3H13!0.14!0.69!ZC3H13;;chr14:105927191..105927216,+!p6@MTA1!0.14!0.69!MTA1;;chr14:74206359..74206374,-!p8@C14orf43!0.14!0.69!C14orf43;;chr17:17723702..17723721,-!p7@SREBF1!0.14!0.69!SREBF1;;chr1:38512457..38512474,-!p1@POU3F1!0.14!0.52!POU3F1;;chr4:106157017..106157029,+!p7@TET2!0.14!0.52!TET2;;chr6:21594252..21594285,+!p11@SOX4!0.14!0.52!SOX4;;chr7:1577111..1577132,+!p4@MAFK!0.14!0.52!MAFK;;chr9:86595503..86595550,-!p2@HNRNPK!0.13!195.08!HNRPK;;chr19:56154958..56155027,+!p1@ZNF581!0.13!40.09!ZNF581;;chr4:467892..467963,-!p1@ABCA11P,p1@ZNF721!0.13!30.37!ZNF721;;chr10:63661437..63661465,+!p2@ARID5B!0.13!22.91!ARID5B;;chr19:23578226..23578285,-!p1@ZNF91!0.13!19.96!ZNF91;;chr6:35464817..35464894,-!p1@TEAD3!0.13!18.22!TEAD3;;chr22:42229246..42229270,+!p2@SREBF2!0.13!14.58!SREBF2;;chr4:38665769..38665801,+!p2@KLF3!0.13!10.41!KLF3;;chr17:47439437..47439533,-!p1@ZNF652!0.13!9.20!ZNF652;;chr12:80084303..80084332,-!p1@PAWR!0.13!6.42!PAWR;;chr15:50647370..50647405,-!p2@GABPB1!0.13!5.90!GABPB1;;chr7:5085480..5085510,+!p1@RBAK!0.13!4.86!RBAK;;chr9:35732561..35732587,+!p3@CREB3!0.13!4.34!CREB3;;chrX:134477924..134477988,-!p1@ZNF75D!0.13!3.82!ZNF75D;;chr19:11071652..11071682,+!p3@SMARCA4!0.13!3.47!SMARCA4;;chr6:134274295..134274308,+!p2@TBPL1!0.13!3.30!TBPL1;;chr7:148892557..148892580,+!p4@ZNF282!0.13!2.60!ZNF282;;chr7:99647411..99647433,+!p2@ZSCAN21!0.13!2.43!ZSCAN21;;chr13:20357110..20357121,-!p2@PSPC1!0.13!2.43!PSPC1;;chr6:7108855..7108903,+!p5@RREB1!0.13!1.91!RREB1;;chr12:56753939..56753951,-!p2@STAT2!0.13!1.74!STAT2;;chr19:12405606..12405629,-!p2@ZNF44!0.13!1.56!ZNF44;;chr4:146402843..146402864,+!p3@SMAD1!0.13!1.56!SMAD1;;chr18:3449821..3449860,+!p7@TGIF1!0.13!1.39!TGIF1;;chr13:45151509..45151539,-!p6@TSC22D1!0.13!1.21!TSC22D1;;chr1:205592857..205592880,-!p6@ELK4!0.13!1.21!ELK4;;chr12:6798731..6798751,-!p4@ZNF384!0.13!1.04!ZNF384;;chr14:103059006..103059017,+!p2@RCOR1!0.13!1.04!RCOR1;;chr14:62193465..62193490,+!p7@HIF1A!0.13!0.87!HIF1A;;chr19:56152503..56152514,+!p7@ZNF580!0.13!0.87!ZNF580;;chr1:197170503..197170557,-!p@chr1:197170503..197170557,-!0.13!0.87!ZBTB41;;chr1:91487352..91487376,-!p9@ZNF644!0.13!0.69!ZNF644;;chr22:30162893..30162907,-!p2@ZMAT5!0.13!0.69!ZMAT5;;chr2:157198760..157198762,-!p5@NR4A2!0.13!0.69!NR4A2;;chr11:706938..707008,-!p3@DEAF1!0.13!0.69!DEAF1;;chr11:707063..707088,-!p4@DEAF1!0.13!0.69!DEAF1;;chr1:23696348..23696363,-!p4@ZNF436!0.13!0.52!ZNF436;;chr5:124082580..124082603,-!p4@ZNF608!0.13!0.52!ZNF608;;chr8:80680024..80680046,-!p2@HEY1!0.13!0.52!HEY1;;chr9:4300004..4300015,-!p6@GLIS3!0.13!0.52!GLIS3;;chr9:14313641..14313652,-!p13@NFIB!0.13!0.35!NFIB;;chr9:14314127..14314129,-!p17@NFIB!0.13!0.35!NFIB;;chr9:14314476..14314487,-!p9@NFIB!0.13!0.35!NFIB;;chr9:4117869..4117882,-!p12@GLIS3!0.13!0.35!GLIS3;;chrX:24167086..24167111,+!p4@ZFX!0.13!0.35!ZFX;;chr9:33295026..33295035,+!p2@NFX1!0.13!0.35!NFX1;;chrX:2418598..2418621,-!p2@ZBED1!0.13!0.35!ZBED1;;chr9:16727978..16728010,-!p6@BNC2!0.13!0.35!BNC2;;chr9:132427883..132427951,+!p2@PRRX2!0.13!0.35!PRRX2;;chr19:45257891..45257908,+!p17@BCL3!0.13!0.35!BCL3;;chr19:45971060..45971122,+!p3@FOSB!0.13!0.35!FOSB;;chr19:47910182..47910187,-!p3@MEIS3!0.13!0.35!MEIS3;;chr19:49140255..49140268,-!p9@DBP!0.13!0.35!DBP;;chr19:52408192..52408200,-!p4@ZNF649!0.13!0.35!ZNF649;;chr19:53758167..53758190,-!p3@ZNF677!0.13!0.35!ZNF677;;chr1:10856665..10856683,-!p4@CASZ1!0.13!0.35!CASZ1;;chr1:14057463..14057496,+!p4@PRDM2!0.13!0.35!PRDM2;;chr1:2234717..2234744,+!p4@SKI!0.13!0.35!SKI;;chr1:227751287..227751298,+!p2@ZNF678!0.13!0.35!ZNF678;;
|sample_dev_stage=
|ffid_belonging_in_development=CL:0000134,CL:0000223,UBERON:0002532,UBERON:0006603,UBERON:0005795,UBERON:0010316
|sample_tissue=uterus
|sample_donor(cell lot)=
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Line 66: Line 40:
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|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.94483282887527e-250!GO:0043226;organelle;2.16175099239008e-201!GO:0043229;intracellular organelle;7.38772916005167e-201!GO:0005737;cytoplasm;9.39368484925104e-199!GO:0043231;intracellular membrane-bound organelle;2.92766261807108e-196!GO:0043227;membrane-bound organelle;3.85988896258389e-196!GO:0044422;organelle part;7.19027761489671e-159!GO:0044446;intracellular organelle part;2.0526293403389e-157!GO:0044444;cytoplasmic part;4.21712808219419e-147!GO:0032991;macromolecular complex;8.33532253414232e-96!GO:0030529;ribonucleoprotein complex;1.06407858213981e-87!GO:0005739;mitochondrion;9.7451024824473e-87!GO:0044237;cellular metabolic process;3.42834041043103e-85!GO:0044238;primary metabolic process;1.21262243556054e-81!GO:0043233;organelle lumen;2.69451042151246e-77!GO:0031974;membrane-enclosed lumen;2.69451042151246e-77!GO:0044428;nuclear part;3.43358763416217e-73!GO:0043170;macromolecule metabolic process;4.63784969016796e-71!GO:0003723;RNA binding;2.89632809309164e-68!GO:0005634;nucleus;1.48112114985381e-67!GO:0005515;protein binding;1.83426046596111e-62!GO:0031090;organelle membrane;1.9658859557325e-58!GO:0044429;mitochondrial part;2.64002724654244e-58!GO:0005840;ribosome;1.22708753569076e-55!GO:0031967;organelle envelope;2.46005923815896e-50!GO:0031975;envelope;6.98492049298847e-50!GO:0003735;structural constituent of ribosome;3.72016022112224e-48!GO:0006412;translation;1.02766436846826e-47!GO:0006396;RNA processing;2.62576686814437e-47!GO:0043234;protein complex;3.64308274731213e-47!GO:0009058;biosynthetic process;3.10343222050193e-46!GO:0015031;protein transport;4.60757290392541e-45!GO:0031981;nuclear lumen;5.01168908970205e-45!GO:0019538;protein metabolic process;1.93001863049723e-44!GO:0033036;macromolecule localization;3.86652512369534e-43!GO:0033279;ribosomal subunit;2.86242100066757e-42!GO:0016043;cellular component organization and biogenesis;8.37922984255765e-42!GO:0044249;cellular biosynthetic process;1.38198280163464e-41!GO:0008104;protein localization;5.21615314431832e-40!GO:0044267;cellular protein metabolic process;9.83440596794448e-40!GO:0044260;cellular macromolecule metabolic process;1.57871834285321e-39!GO:0045184;establishment of protein localization;3.52826385684648e-39!GO:0009059;macromolecule biosynthetic process;1.65873954492606e-38!GO:0043283;biopolymer metabolic process;1.91229573171883e-38!GO:0005740;mitochondrial envelope;5.33379468992412e-38!GO:0046907;intracellular transport;2.49077106391845e-37!GO:0043228;non-membrane-bound organelle;4.43089832699947e-37!GO:0043232;intracellular non-membrane-bound organelle;4.43089832699947e-37!GO:0019866;organelle inner membrane;4.65275346366107e-37!GO:0010467;gene expression;7.91120561025554e-36!GO:0016071;mRNA metabolic process;1.12672171664976e-35!GO:0005829;cytosol;2.17754787534522e-35!GO:0031966;mitochondrial membrane;3.21181321799478e-35!GO:0005743;mitochondrial inner membrane;6.08190176226369e-35!GO:0008380;RNA splicing;1.65597829257519e-33!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.0652519688782e-32!GO:0006996;organelle organization and biogenesis;4.03531387149376e-32!GO:0006397;mRNA processing;8.96935489104865e-31!GO:0022613;ribonucleoprotein complex biogenesis and assembly;4.31108299655718e-29!GO:0006886;intracellular protein transport;4.31108299655718e-29!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.39293615524425e-29!GO:0065003;macromolecular complex assembly;5.26364129483877e-28!GO:0006119;oxidative phosphorylation;5.90034219061557e-27!GO:0005654;nucleoplasm;3.61805877173756e-26!GO:0031980;mitochondrial lumen;7.91560337277608e-25!GO:0005759;mitochondrial matrix;7.91560337277608e-25!GO:0044455;mitochondrial membrane part;1.86190480562462e-24!GO:0005681;spliceosome;2.30769444682411e-24!GO:0022607;cellular component assembly;5.07783797371196e-24!GO:0051649;establishment of cellular localization;8.45702493967331e-24!GO:0051641;cellular localization;1.30158538923298e-23!GO:0000166;nucleotide binding;5.18253143899297e-23!GO:0012505;endomembrane system;7.00212830311747e-23!GO:0006259;DNA metabolic process;2.08089391379675e-22!GO:0016462;pyrophosphatase activity;6.86011965095363e-22!GO:0016817;hydrolase activity, acting on acid anhydrides;7.70149150078092e-22!GO:0015935;small ribosomal subunit;8.05332285316994e-22!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;9.02632186289338e-22!GO:0044445;cytosolic part;1.55371826398058e-21!GO:0015934;large ribosomal subunit;1.67210944565816e-21!GO:0044451;nucleoplasm part;3.15973022493418e-21!GO:0017111;nucleoside-triphosphatase activity;7.39430347886461e-21!GO:0051186;cofactor metabolic process;2.15319651392032e-20!GO:0007049;cell cycle;5.06820066381622e-20!GO:0005746;mitochondrial respiratory chain;5.69582740937127e-19!GO:0005730;nucleolus;5.74775312066968e-19!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;8.28067705704893e-19!GO:0006457;protein folding;1.22665953774476e-18!GO:0016874;ligase activity;1.39891742109154e-18!GO:0003676;nucleic acid binding;1.72234824995318e-18!GO:0050136;NADH dehydrogenase (quinone) activity;1.00729300243283e-17!GO:0003954;NADH dehydrogenase activity;1.00729300243283e-17!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.00729300243283e-17!GO:0005783;endoplasmic reticulum;1.52178246681029e-17!GO:0044265;cellular macromolecule catabolic process;2.9918304174948e-17!GO:0005761;mitochondrial ribosome;8.1809999480954e-17!GO:0000313;organellar ribosome;8.1809999480954e-17!GO:0006512;ubiquitin cycle;9.40303228227506e-17!GO:0022618;protein-RNA complex assembly;1.00673601550017e-16!GO:0044248;cellular catabolic process;1.18646550921513e-16!GO:0006732;coenzyme metabolic process;1.93863375855432e-16!GO:0032553;ribonucleotide binding;2.98201465728638e-16!GO:0032555;purine ribonucleotide binding;2.98201465728638e-16!GO:0048770;pigment granule;4.62480067460924e-16!GO:0042470;melanosome;4.62480067460924e-16!GO:0005794;Golgi apparatus;5.92584281374635e-16!GO:0017076;purine nucleotide binding;6.84236195295684e-16!GO:0043285;biopolymer catabolic process;7.18029811079871e-16!GO:0042775;organelle ATP synthesis coupled electron transport;9.59963138765195e-16!GO:0042773;ATP synthesis coupled electron transport;9.59963138765195e-16!GO:0030964;NADH dehydrogenase complex (quinone);1.40933020204895e-15!GO:0045271;respiratory chain complex I;1.40933020204895e-15!GO:0005747;mitochondrial respiratory chain complex I;1.40933020204895e-15!GO:0016070;RNA metabolic process;1.41070026522063e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;1.45472671173685e-15!GO:0044432;endoplasmic reticulum part;2.43847932635803e-15!GO:0019941;modification-dependent protein catabolic process;2.95047858516925e-15!GO:0043632;modification-dependent macromolecule catabolic process;2.95047858516925e-15!GO:0000502;proteasome complex (sensu Eukaryota);2.99207336312025e-15!GO:0044257;cellular protein catabolic process;3.2454027418854e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.36013092336319e-15!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.99140402070551e-15!GO:0006511;ubiquitin-dependent protein catabolic process;6.18044951898239e-15!GO:0009057;macromolecule catabolic process;6.45860218447305e-15!GO:0000278;mitotic cell cycle;1.00495820865602e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.06625853513178e-14!GO:0006974;response to DNA damage stimulus;1.35593221823947e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.40070963822313e-14!GO:0006605;protein targeting;1.47310514776094e-14!GO:0051082;unfolded protein binding;1.97519584931976e-14!GO:0022402;cell cycle process;2.82880396933881e-14!GO:0048193;Golgi vesicle transport;8.71186199660947e-14!GO:0008134;transcription factor binding;1.68046886024259e-13!GO:0005635;nuclear envelope;1.69010737102938e-13!GO:0016192;vesicle-mediated transport;1.75328223722677e-13!GO:0000398;nuclear mRNA splicing, via spliceosome;4.40415803086017e-13!GO:0000375;RNA splicing, via transesterification reactions;4.40415803086017e-13!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.40415803086017e-13!GO:0009055;electron carrier activity;6.0663029723662e-13!GO:0008135;translation factor activity, nucleic acid binding;6.26785087644824e-13!GO:0030163;protein catabolic process;6.54961293369162e-13!GO:0042254;ribosome biogenesis and assembly;6.74625590221079e-13!GO:0031965;nuclear membrane;7.33281310313121e-13!GO:0043412;biopolymer modification;2.36923037566147e-12!GO:0005524;ATP binding;3.673904254135e-12!GO:0007005;mitochondrion organization and biogenesis;4.2513470668136e-12!GO:0042175;nuclear envelope-endoplasmic reticulum network;4.2513470668136e-12!GO:0005789;endoplasmic reticulum membrane;5.8134460104766e-12!GO:0006281;DNA repair;6.04879047199505e-12!GO:0000087;M phase of mitotic cell cycle;7.26825837978426e-12!GO:0032559;adenyl ribonucleotide binding;8.30789850675571e-12!GO:0007067;mitosis;9.62816448711219e-12!GO:0016887;ATPase activity;1.78478163706803e-11!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.01893283803332e-11!GO:0030554;adenyl nucleotide binding;2.20550439102532e-11!GO:0005694;chromosome;2.61099627025048e-11!GO:0042623;ATPase activity, coupled;3.1586801694244e-11!GO:0009259;ribonucleotide metabolic process;4.15294827336054e-11!GO:0016604;nuclear body;5.43140468194593e-11!GO:0051188;cofactor biosynthetic process;5.76845027351258e-11!GO:0044453;nuclear membrane part;5.94970912571045e-11!GO:0051301;cell division;7.56471773662154e-11!GO:0006399;tRNA metabolic process;8.1294129533799e-11!GO:0008565;protein transporter activity;9.29048669573369e-11!GO:0006163;purine nucleotide metabolic process;9.58942292436177e-11!GO:0006464;protein modification process;1.21977752242454e-10!GO:0003743;translation initiation factor activity;1.58916120285863e-10!GO:0006413;translational initiation;1.89277736338072e-10!GO:0015986;ATP synthesis coupled proton transport;2.40586277677638e-10!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.40586277677638e-10!GO:0009150;purine ribonucleotide metabolic process;3.17503603595822e-10!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.32934942746192e-10!GO:0044427;chromosomal part;3.98866473897215e-10!GO:0009056;catabolic process;3.98866473897215e-10!GO:0022403;cell cycle phase;4.08107987796937e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.45090926560509e-10!GO:0006260;DNA replication;5.76859992470779e-10!GO:0006446;regulation of translational initiation;5.789732638115e-10!GO:0019787;small conjugating protein ligase activity;8.2478823465306e-10!GO:0009141;nucleoside triphosphate metabolic process;8.47090594623945e-10!GO:0008639;small protein conjugating enzyme activity;9.1442331746512e-10!GO:0006164;purine nucleotide biosynthetic process;1.06469698988763e-09!GO:0009199;ribonucleoside triphosphate metabolic process;1.10580245436714e-09!GO:0004842;ubiquitin-protein ligase activity;1.33452569117522e-09!GO:0009060;aerobic respiration;1.35894260920709e-09!GO:0009260;ribonucleotide biosynthetic process;1.58580764831914e-09!GO:0046034;ATP metabolic process;1.61237801452395e-09!GO:0065002;intracellular protein transport across a membrane;1.81409286605261e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.09926958919285e-09!GO:0009144;purine nucleoside triphosphate metabolic process;2.09926958919285e-09!GO:0006461;protein complex assembly;2.55358225352211e-09!GO:0012501;programmed cell death;3.04519068876647e-09!GO:0009152;purine ribonucleotide biosynthetic process;3.448965526158e-09!GO:0016469;proton-transporting two-sector ATPase complex;3.96664585887685e-09!GO:0006754;ATP biosynthetic process;4.27572955103577e-09!GO:0006753;nucleoside phosphate metabolic process;4.27572955103577e-09!GO:0009142;nucleoside triphosphate biosynthetic process;4.38043293615473e-09!GO:0009201;ribonucleoside triphosphate biosynthetic process;4.38043293615473e-09!GO:0045333;cellular respiration;4.47017451019031e-09!GO:0004386;helicase activity;4.53779820064214e-09!GO:0006915;apoptosis;4.74333911297176e-09!GO:0019829;cation-transporting ATPase activity;4.8613376639601e-09!GO:0016491;oxidoreductase activity;5.91396071834185e-09!GO:0005643;nuclear pore;6.18277894762088e-09!GO:0016607;nuclear speck;6.19342665107107e-09!GO:0000279;M phase;7.2487736704064e-09!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;8.30071119910587e-09!GO:0009145;purine nucleoside triphosphate biosynthetic process;8.30071119910587e-09!GO:0015078;hydrogen ion transmembrane transporter activity;8.41602849669308e-09!GO:0051276;chromosome organization and biogenesis;8.49114829881547e-09!GO:0006913;nucleocytoplasmic transport;9.30011611071137e-09!GO:0043687;post-translational protein modification;1.04366199663635e-08!GO:0009108;coenzyme biosynthetic process;1.10510869582951e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.43926091131218e-08!GO:0009719;response to endogenous stimulus;1.47665665275077e-08!GO:0015630;microtubule cytoskeleton;2.12532914445835e-08!GO:0051169;nuclear transport;2.12532914445835e-08!GO:0003712;transcription cofactor activity;2.13458730150076e-08!GO:0048475;coated membrane;2.27410591920462e-08!GO:0030117;membrane coat;2.27410591920462e-08!GO:0008026;ATP-dependent helicase activity;2.74302599993706e-08!GO:0016881;acid-amino acid ligase activity;3.51089036847257e-08!GO:0000074;regulation of progression through cell cycle;3.7170937153445e-08!GO:0006099;tricarboxylic acid cycle;3.91474231444968e-08!GO:0046356;acetyl-CoA catabolic process;3.91474231444968e-08!GO:0044431;Golgi apparatus part;4.04974470029476e-08!GO:0006364;rRNA processing;4.1165697832658e-08!GO:0051726;regulation of cell cycle;4.49982691128302e-08!GO:0008219;cell death;4.67313788931255e-08!GO:0016265;death;4.67313788931255e-08!GO:0005768;endosome;4.9064682524796e-08!GO:0003924;GTPase activity;4.99188564488596e-08!GO:0030532;small nuclear ribonucleoprotein complex;6.06566682977163e-08!GO:0016072;rRNA metabolic process;6.09316126416706e-08!GO:0009117;nucleotide metabolic process;7.51952889452744e-08!GO:0006752;group transfer coenzyme metabolic process;7.93847482858084e-08!GO:0032446;protein modification by small protein conjugation;8.25664831340879e-08!GO:0006366;transcription from RNA polymerase II promoter;9.24812279397779e-08!GO:0006084;acetyl-CoA metabolic process;1.00120395813637e-07!GO:0006888;ER to Golgi vesicle-mediated transport;1.02341461887237e-07!GO:0005793;ER-Golgi intermediate compartment;1.11043632119234e-07!GO:0005525;GTP binding;1.43628368745498e-07!GO:0016567;protein ubiquitination;1.5117585277854e-07!GO:0006325;establishment and/or maintenance of chromatin architecture;1.56809616537998e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.57435081599943e-07!GO:0004812;aminoacyl-tRNA ligase activity;1.57435081599943e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.57435081599943e-07!GO:0005667;transcription factor complex;1.62238491735079e-07!GO:0050657;nucleic acid transport;1.81014089788918e-07!GO:0051236;establishment of RNA localization;1.81014089788918e-07!GO:0050658;RNA transport;1.81014089788918e-07!GO:0006403;RNA localization;1.81537949430979e-07!GO:0016787;hydrolase activity;1.81914930574165e-07!GO:0030120;vesicle coat;2.13593177439528e-07!GO:0030662;coated vesicle membrane;2.13593177439528e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.37278384880029e-07!GO:0051187;cofactor catabolic process;2.58429017711531e-07!GO:0006839;mitochondrial transport;2.64990992707249e-07!GO:0043038;amino acid activation;2.86503859513199e-07!GO:0006418;tRNA aminoacylation for protein translation;2.86503859513199e-07!GO:0043039;tRNA aminoacylation;2.86503859513199e-07!GO:0045259;proton-transporting ATP synthase complex;3.13236438562587e-07!GO:0016740;transferase activity;3.38871387929547e-07!GO:0017038;protein import;3.4966889209984e-07!GO:0009109;coenzyme catabolic process;3.62418361804781e-07!GO:0046930;pore complex;3.75966456535053e-07!GO:0006323;DNA packaging;3.86179071730478e-07!GO:0006091;generation of precursor metabolites and energy;8.85773222061087e-07!GO:0043623;cellular protein complex assembly;2.00481888912448e-06!GO:0016779;nucleotidyltransferase activity;2.17395095104097e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.98110056467726e-06!GO:0000139;Golgi membrane;3.49384559556797e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;3.99309784805772e-06!GO:0032561;guanyl ribonucleotide binding;4.06157187770688e-06!GO:0019001;guanyl nucleotide binding;4.06157187770688e-06!GO:0000245;spliceosome assembly;4.11606203846312e-06!GO:0000785;chromatin;4.16450329151141e-06!GO:0051028;mRNA transport;4.70537804251519e-06!GO:0003697;single-stranded DNA binding;5.43580363393135e-06!GO:0005762;mitochondrial large ribosomal subunit;5.7680829084422e-06!GO:0000315;organellar large ribosomal subunit;5.7680829084422e-06!GO:0007264;small GTPase mediated signal transduction;6.33397321228998e-06!GO:0008654;phospholipid biosynthetic process;6.50157822581332e-06!GO:0065004;protein-DNA complex assembly;6.5472570671655e-06!GO:0043566;structure-specific DNA binding;6.70711205249253e-06!GO:0006613;cotranslational protein targeting to membrane;7.33537922399881e-06!GO:0000314;organellar small ribosomal subunit;7.41486755495896e-06!GO:0005763;mitochondrial small ribosomal subunit;7.41486755495896e-06!GO:0016568;chromatin modification;8.08055767013299e-06!GO:0000151;ubiquitin ligase complex;9.89625149500803e-06!GO:0005839;proteasome core complex (sensu Eukaryota);1.08638488486925e-05!GO:0051246;regulation of protein metabolic process;1.28112228858229e-05!GO:0016126;sterol biosynthetic process;1.32377660550254e-05!GO:0045454;cell redox homeostasis;1.5748558823459e-05!GO:0006793;phosphorus metabolic process;1.98487737080124e-05!GO:0006796;phosphate metabolic process;1.98487737080124e-05!GO:0031988;membrane-bound vesicle;2.23089708768475e-05!GO:0015980;energy derivation by oxidation of organic compounds;2.40436889204898e-05!GO:0016023;cytoplasmic membrane-bound vesicle;2.50230252724401e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.51200985985209e-05!GO:0005819;spindle;2.57028569169071e-05!GO:0003724;RNA helicase activity;2.80529422725734e-05!GO:0043069;negative regulation of programmed cell death;3.48536305425676e-05!GO:0015992;proton transport;3.58704221781619e-05!GO:0005773;vacuole;3.65390076595118e-05!GO:0044440;endosomal part;3.90474105600256e-05!GO:0010008;endosome membrane;3.90474105600256e-05!GO:0006333;chromatin assembly or disassembly;4.0003567063904e-05!GO:0030118;clathrin coat;4.14257216670772e-05!GO:0016853;isomerase activity;4.48071971621447e-05!GO:0043021;ribonucleoprotein binding;4.6149374549098e-05!GO:0004298;threonine endopeptidase activity;4.70960816039298e-05!GO:0005813;centrosome;4.73351938111899e-05!GO:0006916;anti-apoptosis;4.93816677443598e-05!GO:0006818;hydrogen transport;5.5707906254434e-05!GO:0031982;vesicle;6.01016779457189e-05!GO:0005815;microtubule organizing center;6.08375139167416e-05!GO:0043067;regulation of programmed cell death;6.40394761201214e-05!GO:0043066;negative regulation of apoptosis;6.83956922483322e-05!GO:0042981;regulation of apoptosis;7.10831571738969e-05!GO:0003899;DNA-directed RNA polymerase activity;7.19731584832585e-05!GO:0006626;protein targeting to mitochondrion;8.16847415648272e-05!GO:0009165;nucleotide biosynthetic process;8.38816956984048e-05!GO:0031410;cytoplasmic vesicle;8.77911049070253e-05!GO:0048471;perinuclear region of cytoplasm;8.8430035051739e-05!GO:0005798;Golgi-associated vesicle;9.03238199071156e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000102588061231928!GO:0051427;hormone receptor binding;0.000107043018359904!GO:0016310;phosphorylation;0.000109435830751579!GO:0000775;chromosome, pericentric region;0.000111550617631379!GO:0003713;transcription coactivator activity;0.000119897308544363!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000123612591709784!GO:0006261;DNA-dependent DNA replication;0.000124371974252639!GO:0007051;spindle organization and biogenesis;0.000134877833980958!GO:0031252;leading edge;0.000136114046833176!GO:0006695;cholesterol biosynthetic process;0.000145128049330647!GO:0006082;organic acid metabolic process;0.000160575687668737!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000160575687668737!GO:0007010;cytoskeleton organization and biogenesis;0.000163626295664742!GO:0008033;tRNA processing;0.000172285132332591!GO:0050794;regulation of cellular process;0.000174363554371193!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000175200902375678!GO:0005048;signal sequence binding;0.000182023362571163!GO:0016363;nuclear matrix;0.00018315672739933!GO:0019752;carboxylic acid metabolic process;0.000183875192948966!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000183913806212821!GO:0005770;late endosome;0.000194467719455126!GO:0051168;nuclear export;0.000216875549693274!GO:0035257;nuclear hormone receptor binding;0.000216875549693274!GO:0043681;protein import into mitochondrion;0.000236275681032518!GO:0051170;nuclear import;0.00023960512657253!GO:0000323;lytic vacuole;0.000249674946285388!GO:0005764;lysosome;0.000249674946285388!GO:0006612;protein targeting to membrane;0.000260841344755478!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000261581959132841!GO:0015399;primary active transmembrane transporter activity;0.000261581959132841!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000286786164064776!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000327457750574111!GO:0007006;mitochondrial membrane organization and biogenesis;0.000363680580559631!GO:0016564;transcription repressor activity;0.000363921797697784!GO:0005885;Arp2/3 protein complex;0.000364362013074672!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.000366314593136472!GO:0005905;coated pit;0.00040531743303988!GO:0008250;oligosaccharyl transferase complex;0.000415005731210136!GO:0030119;AP-type membrane coat adaptor complex;0.000426752806770661!GO:0005788;endoplasmic reticulum lumen;0.000445664389259779!GO:0016563;transcription activator activity;0.000446527853067095!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.000447101350658561!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000449998816147094!GO:0033116;ER-Golgi intermediate compartment membrane;0.00045167252822985!GO:0008186;RNA-dependent ATPase activity;0.000454462967156063!GO:0048523;negative regulation of cellular process;0.000458991583174975!GO:0005874;microtubule;0.000469936213238928!GO:0006606;protein import into nucleus;0.000477075841039081!GO:0030867;rough endoplasmic reticulum membrane;0.000479821587338736!GO:0004576;oligosaccharyl transferase activity;0.000495738774786469!GO:0031324;negative regulation of cellular metabolic process;0.000502008909801965!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000572352496215609!GO:0031968;organelle outer membrane;0.000576803196695921!GO:0008092;cytoskeletal protein binding;0.0005890299952915!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000624327067545129!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000624327067545129!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000624327067545129!GO:0006383;transcription from RNA polymerase III promoter;0.000631073439140785!GO:0051920;peroxiredoxin activity;0.000631158051549373!GO:0030658;transport vesicle membrane;0.000637661426428887!GO:0016859;cis-trans isomerase activity;0.000679231936337288!GO:0006401;RNA catabolic process;0.00069221132028996!GO:0009892;negative regulation of metabolic process;0.000702887764066211!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000722585021590006!GO:0030131;clathrin adaptor complex;0.000756713510235488!GO:0051329;interphase of mitotic cell cycle;0.000785293935951971!GO:0005769;early endosome;0.000835747402594486!GO:0019867;outer membrane;0.000835747402594486!GO:0016044;membrane organization and biogenesis;0.000866622674199283!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.000866622674199283!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.000940975344321501!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00100969580905875!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00100969580905875!GO:0005741;mitochondrial outer membrane;0.00101935818097218!GO:0022890;inorganic cation transmembrane transporter activity;0.0010218385661136!GO:0003714;transcription corepressor activity;0.00104435988020044!GO:0030660;Golgi-associated vesicle membrane;0.00108420669981571!GO:0003729;mRNA binding;0.00111984275121823!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00113552614914023!GO:0004004;ATP-dependent RNA helicase activity;0.00123917078586793!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00126681308851683!GO:0006520;amino acid metabolic process;0.00130801652390301!GO:0051789;response to protein stimulus;0.00130913151510488!GO:0006986;response to unfolded protein;0.00130913151510488!GO:0006414;translational elongation;0.00133560862043809!GO:0008610;lipid biosynthetic process;0.00133984440818079!GO:0046483;heterocycle metabolic process;0.00133984440818079!GO:0006402;mRNA catabolic process;0.00134901475792345!GO:0000776;kinetochore;0.00135715372467288!GO:0044262;cellular carbohydrate metabolic process;0.00137391313553696!GO:0046489;phosphoinositide biosynthetic process;0.00140833230843754!GO:0048500;signal recognition particle;0.00141234800399173!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0014629022405224!GO:0005791;rough endoplasmic reticulum;0.00148835689974509!GO:0018196;peptidyl-asparagine modification;0.00168107971153634!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00168107971153634!GO:0019899;enzyme binding;0.00177648254185776!GO:0035258;steroid hormone receptor binding;0.00188881086394788!GO:0050662;coenzyme binding;0.00189123610949225!GO:0046474;glycerophospholipid biosynthetic process;0.00193706457918371!GO:0051325;interphase;0.00194476681882769!GO:0016408;C-acyltransferase activity;0.00196068187374315!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00198080312258557!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.00205782564081077!GO:0042802;identical protein binding;0.00217893281946985!GO:0051540;metal cluster binding;0.00221384714174839!GO:0051536;iron-sulfur cluster binding;0.00221384714174839!GO:0006302;double-strand break repair;0.00225923564904214!GO:0008637;apoptotic mitochondrial changes;0.00232494355713024!GO:0003684;damaged DNA binding;0.00233803715044646!GO:0045786;negative regulation of progression through cell cycle;0.0023442428524699!GO:0006334;nucleosome assembly;0.0025383599171043!GO:0030880;RNA polymerase complex;0.00265996458319835!GO:0005758;mitochondrial intermembrane space;0.00271309873860552!GO:0031072;heat shock protein binding;0.00273163738839972!GO:0019843;rRNA binding;0.00278314354642747!GO:0005657;replication fork;0.00281932839472657!GO:0003690;double-stranded DNA binding;0.00282927619482488!GO:0007017;microtubule-based process;0.00289796815401222!GO:0030176;integral to endoplasmic reticulum membrane;0.00289985875266929!GO:0046467;membrane lipid biosynthetic process;0.002910635749987!GO:0008094;DNA-dependent ATPase activity;0.00291070702412381!GO:0051252;regulation of RNA metabolic process;0.00296751232483208!GO:0043492;ATPase activity, coupled to movement of substances;0.00305457653196074!GO:0005684;U2-dependent spliceosome;0.00314033937458757!GO:0000059;protein import into nucleus, docking;0.00316706700674478!GO:0006352;transcription initiation;0.00323949029490048!GO:0031497;chromatin assembly;0.00337261740808538!GO:0008312;7S RNA binding;0.00348930298198048!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00364732340907602!GO:0045047;protein targeting to ER;0.00364732340907602!GO:0044452;nucleolar part;0.00365015761538304!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00369669278034682!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00375753116193715!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00376916015943831!GO:0051052;regulation of DNA metabolic process;0.00379693671658727!GO:0048519;negative regulation of biological process;0.00379693671658727!GO:0030133;transport vesicle;0.00386069489734433!GO:0005777;peroxisome;0.0039758270249236!GO:0042579;microbody;0.0039758270249236!GO:0048037;cofactor binding;0.00410408534552897!GO:0008632;apoptotic program;0.00415810398934111!GO:0048487;beta-tubulin binding;0.00417117601288716!GO:0016251;general RNA polymerase II transcription factor activity;0.00421214893048136!GO:0005637;nuclear inner membrane;0.00427104170060383!GO:0000075;cell cycle checkpoint;0.00430010972623354!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00433857275093066!GO:0016407;acetyltransferase activity;0.00465290301706556!GO:0006778;porphyrin metabolic process;0.00471517738872242!GO:0033013;tetrapyrrole metabolic process;0.00471517738872242!GO:0030036;actin cytoskeleton organization and biogenesis;0.00472291508312292!GO:0006979;response to oxidative stress;0.00494838298493342!GO:0051087;chaperone binding;0.00494838298493342!GO:0006595;polyamine metabolic process;0.00511726415725292!GO:0008139;nuclear localization sequence binding;0.0053988475770871!GO:0030125;clathrin vesicle coat;0.0053988475770871!GO:0030665;clathrin coated vesicle membrane;0.0053988475770871!GO:0016197;endosome transport;0.00556948135126104!GO:0006891;intra-Golgi vesicle-mediated transport;0.00559404920545039!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00575224204040448!GO:0000428;DNA-directed RNA polymerase complex;0.00575224204040448!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00591648898759332!GO:0065009;regulation of a molecular function;0.00600517373532943!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00601543105911686!GO:0015002;heme-copper terminal oxidase activity;0.00601543105911686!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00601543105911686!GO:0004129;cytochrome-c oxidase activity;0.00601543105911686!GO:0006672;ceramide metabolic process;0.00686449872320523!GO:0003682;chromatin binding;0.00693741843649668!GO:0015631;tubulin binding;0.00709078545674762!GO:0043488;regulation of mRNA stability;0.00721855055719943!GO:0043487;regulation of RNA stability;0.00721855055719943!GO:0016481;negative regulation of transcription;0.00723072277187835!GO:0045045;secretory pathway;0.00746191481651183!GO:0016272;prefoldin complex;0.00758194537233087!GO:0030132;clathrin coat of coated pit;0.00764622728598298!GO:0030521;androgen receptor signaling pathway;0.00768411289275922!GO:0007088;regulation of mitosis;0.00768411289275922!GO:0030663;COPI coated vesicle membrane;0.00789847570956492!GO:0030126;COPI vesicle coat;0.00789847570956492!GO:0005869;dynactin complex;0.00796938818641109!GO:0043284;biopolymer biosynthetic process;0.00799150660603737!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.00799655535167961!GO:0003711;transcription elongation regulator activity;0.00802480462132186!GO:0019222;regulation of metabolic process;0.00815167227612327!GO:0003678;DNA helicase activity;0.00820419901216397!GO:0008180;signalosome;0.00835555230806378!GO:0006749;glutathione metabolic process;0.0084711264915019!GO:0000339;RNA cap binding;0.00860896438206948!GO:0050681;androgen receptor binding;0.00881674712059022!GO:0031970;organelle envelope lumen;0.00891880727636897!GO:0030384;phosphoinositide metabolic process;0.00895318518286278!GO:0031124;mRNA 3'-end processing;0.00898013392211163!GO:0006506;GPI anchor biosynthetic process;0.00928344036526148!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.00939512517924133!GO:0006779;porphyrin biosynthetic process;0.00939512517924133!GO:0033014;tetrapyrrole biosynthetic process;0.00939512517924133!GO:0043022;ribosome binding;0.00951432059155883!GO:0046519;sphingoid metabolic process;0.00965155894375241!GO:0006289;nucleotide-excision repair;0.0100813471255588!GO:0030134;ER to Golgi transport vesicle;0.0104004419029468!GO:0017166;vinculin binding;0.010686337408537!GO:0001836;release of cytochrome c from mitochondria;0.0107195360619101!GO:0005832;chaperonin-containing T-complex;0.0110931327108759!GO:0007052;mitotic spindle organization and biogenesis;0.0114265666955954!GO:0008287;protein serine/threonine phosphatase complex;0.0114984607929155!GO:0006118;electron transport;0.0119659116717604!GO:0030127;COPII vesicle coat;0.0119980890121798!GO:0012507;ER to Golgi transport vesicle membrane;0.0119980890121798!GO:0006497;protein amino acid lipidation;0.0123756748155241!GO:0006650;glycerophospholipid metabolic process;0.0128921848285332!GO:0006505;GPI anchor metabolic process;0.0128921848285332!GO:0006405;RNA export from nucleus;0.0128921848285332!GO:0000096;sulfur amino acid metabolic process;0.0131071263010686!GO:0006635;fatty acid beta-oxidation;0.0131466484334988!GO:0051539;4 iron, 4 sulfur cluster binding;0.0137450935455552!GO:0030659;cytoplasmic vesicle membrane;0.0141590447603073!GO:0042158;lipoprotein biosynthetic process;0.0141590447603073!GO:0008652;amino acid biosynthetic process;0.0143136002551472!GO:0006611;protein export from nucleus;0.0143401531242821!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0146014736182428!GO:0008168;methyltransferase activity;0.0146120620810992!GO:0016741;transferase activity, transferring one-carbon groups;0.0147929050987876!GO:0031901;early endosome membrane;0.0154972783755111!GO:0051287;NAD binding;0.0157473072078533!GO:0042168;heme metabolic process;0.0159772954484759!GO:0004448;isocitrate dehydrogenase activity;0.0163391336247224!GO:0005669;transcription factor TFIID complex;0.016851537455617!GO:0008234;cysteine-type peptidase activity;0.016851537455617!GO:0000209;protein polyubiquitination;0.0175375514522566!GO:0006378;mRNA polyadenylation;0.0179222860482598!GO:0030029;actin filament-based process;0.0183027643075647!GO:0006740;NADPH regeneration;0.0185149106277502!GO:0006098;pentose-phosphate shunt;0.0185149106277502!GO:0030518;steroid hormone receptor signaling pathway;0.01878568443089!GO:0050789;regulation of biological process;0.0191184192783981!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0192355051967399!GO:0006519;amino acid and derivative metabolic process;0.0210134261537619!GO:0043414;biopolymer methylation;0.0215655751428658!GO:0016125;sterol metabolic process;0.0218826306184067!GO:0000049;tRNA binding;0.0220708702772542!GO:0004532;exoribonuclease activity;0.0222913537340779!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0222913537340779!GO:0006643;membrane lipid metabolic process;0.0223020391838431!GO:0007265;Ras protein signal transduction;0.0225704307699025!GO:0030027;lamellipodium;0.0232120551948759!GO:0032508;DNA duplex unwinding;0.0235331264479414!GO:0032392;DNA geometric change;0.0235331264479414!GO:0046983;protein dimerization activity;0.0236305627895636!GO:0000159;protein phosphatase type 2A complex;0.024272994813299!GO:0006144;purine base metabolic process;0.0246387255983873!GO:0030041;actin filament polymerization;0.0248160397045114!GO:0031529;ruffle organization and biogenesis;0.0250710857227651!GO:0008320;protein transmembrane transporter activity;0.0252069292529132!GO:0008299;isoprenoid biosynthetic process;0.0253205883972448!GO:0022884;macromolecule transmembrane transporter activity;0.0253562559335214!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0253562559335214!GO:0009451;RNA modification;0.0261082412028537!GO:0008022;protein C-terminus binding;0.0261541646106596!GO:0004674;protein serine/threonine kinase activity;0.0263049972004237!GO:0008601;protein phosphatase type 2A regulator activity;0.0267518161736915!GO:0008538;proteasome activator activity;0.0269090280286789!GO:0007059;chromosome segregation;0.0277802847433283!GO:0005744;mitochondrial inner membrane presequence translocase complex;0.0284912299641757!GO:0022406;membrane docking;0.0288979956159087!GO:0048278;vesicle docking;0.0288979956159087!GO:0043433;negative regulation of transcription factor activity;0.0291059426384866!GO:0000792;heterochromatin;0.0291059426384866!GO:0033673;negative regulation of kinase activity;0.0291059426384866!GO:0006469;negative regulation of protein kinase activity;0.0291059426384866!GO:0044433;cytoplasmic vesicle part;0.0292743043078499!GO:0030833;regulation of actin filament polymerization;0.0292743043078499!GO:0030137;COPI-coated vesicle;0.029795987797507!GO:0001726;ruffle;0.0304365104906044!GO:0007040;lysosome organization and biogenesis;0.030923078787637!GO:0003746;translation elongation factor activity;0.0310473206705824!GO:0050178;phenylpyruvate tautomerase activity;0.0310950200999142!GO:0051348;negative regulation of transferase activity;0.0311976815233905!GO:0007034;vacuolar transport;0.0316474990031754!GO:0004527;exonuclease activity;0.0316612005173829!GO:0006783;heme biosynthetic process;0.0317748792445389!GO:0007021;tubulin folding;0.0319161026951222!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0320237074111193!GO:0004722;protein serine/threonine phosphatase activity;0.0328414154664201!GO:0004860;protein kinase inhibitor activity;0.0337334641900233!GO:0007033;vacuole organization and biogenesis;0.0337827688670608!GO:0005784;translocon complex;0.0339700890108749!GO:0045941;positive regulation of transcription;0.0341276810110621!GO:0006733;oxidoreduction coenzyme metabolic process;0.0342175591291009!GO:0051128;regulation of cellular component organization and biogenesis;0.0343753853822442!GO:0008097;5S rRNA binding;0.034657377461367!GO:0006268;DNA unwinding during replication;0.0349138120016453!GO:0006730;one-carbon compound metabolic process;0.0349270652877879!GO:0006338;chromatin remodeling;0.0349270652877879!GO:0006767;water-soluble vitamin metabolic process;0.0350057431191248!GO:0006284;base-excision repair;0.0351935815540024!GO:0051098;regulation of binding;0.0353857888818476!GO:0031371;ubiquitin conjugating enzyme complex;0.035436367633132!GO:0031902;late endosome membrane;0.0355335375729342!GO:0007093;mitotic cell cycle checkpoint;0.036075051051078!GO:0006984;ER-nuclear signaling pathway;0.0364335935686085!GO:0004177;aminopeptidase activity;0.0367237594184205!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0370660422248359!GO:0016584;nucleosome positioning;0.0374655964573444!GO:0030913;paranodal junction assembly;0.0381463500410094!GO:0032288;myelin formation;0.0381463500410094!GO:0007032;endosome organization and biogenesis;0.0385080650170074!GO:0042769;DNA damage response, detection of DNA damage;0.038608934486273!GO:0006376;mRNA splice site selection;0.0388956708003922!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0388956708003922!GO:0006904;vesicle docking during exocytosis;0.0389352990806942!GO:0016791;phosphoric monoester hydrolase activity;0.0390571911219887!GO:0005876;spindle microtubule;0.0391216372365698!GO:0008426;protein kinase C inhibitor activity;0.0392177548615494!GO:0030508;thiol-disulfide exchange intermediate activity;0.0392915237497288!GO:0006807;nitrogen compound metabolic process;0.0393136704577168!GO:0042026;protein refolding;0.0394992620428724!GO:0004518;nuclease activity;0.0395081515186569!GO:0005774;vacuolar membrane;0.0395772025029365!GO:0042393;histone binding;0.0404879408556291!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0404879408556291!GO:0010257;NADH dehydrogenase complex assembly;0.0404879408556291!GO:0033108;mitochondrial respiratory chain complex assembly;0.0404879408556291!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.040580445380871!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.040580445380871!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.040580445380871!GO:0045039;protein import into mitochondrial inner membrane;0.040580445380871!GO:0006607;NLS-bearing substrate import into nucleus;0.040991878538688!GO:0012506;vesicle membrane;0.0412617762542667!GO:0005802;trans-Golgi network;0.0421078555474482!GO:0045893;positive regulation of transcription, DNA-dependent;0.0422593537008867!GO:0007243;protein kinase cascade;0.0423853141020126!GO:0006644;phospholipid metabolic process;0.0427183849653782!GO:0030503;regulation of cell redox homeostasis;0.0427407345697167!GO:0019834;phospholipase A2 inhibitor activity;0.0429265972920877!GO:0000738;DNA catabolic process, exonucleolytic;0.0436508152794253!GO:0000086;G2/M transition of mitotic cell cycle;0.0436512175181889!GO:0016653;oxidoreductase activity, acting on NADH or NADPH, heme protein as acceptor;0.0437050221107876!GO:0031625;ubiquitin protein ligase binding;0.0438466350969022!GO:0000082;G1/S transition of mitotic cell cycle;0.044031744621704!GO:0006360;transcription from RNA polymerase I promoter;0.0441117819366501!GO:0044438;microbody part;0.0441117819366501!GO:0044439;peroxisomal part;0.0441117819366501!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0444248117687215!GO:0031123;RNA 3'-end processing;0.0449432783606868!GO:0005938;cell cortex;0.0454225492092043!GO:0006892;post-Golgi vesicle-mediated transport;0.0454225492092043!GO:0003756;protein disulfide isomerase activity;0.0461985969494936!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0461985969494936!GO:0004300;enoyl-CoA hydratase activity;0.0466322874186742!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0469243741925053!GO:0004003;ATP-dependent DNA helicase activity;0.0469243741925053!GO:0005754;mitochondrial proton-transporting ATP synthase, catalytic core;0.0469243741925053!GO:0000275;mitochondrial proton-transporting ATP synthase complex, catalytic core F(1);0.0469243741925053!GO:0045267;proton-transporting ATP synthase, catalytic core;0.0469243741925053!GO:0006275;regulation of DNA replication;0.0469895848402589!GO:0030911;TPR domain binding;0.0471037407975362!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0482562887136007!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0483780149238647!GO:0008361;regulation of cell size;0.0484948325484686!GO:0032259;methylation;0.0485897441708834!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0492786405108451!GO:0043071;positive regulation of non-apoptotic programmed cell death;0.0493221827773653!GO:0050811;GABA receptor binding;0.0493221827773653!GO:0006541;glutamine metabolic process;0.0493221827773653!GO:0006007;glucose catabolic process;0.0496864714800215!GO:0005652;nuclear lamina;0.0499153966597414
|sample_id=10643
|sample_note=
|sample_sex=female
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=uterus
|top_motifs=FOXQ1:2.13131983523;SNAI1..3:2.07657528751;ZEB1:1.95518164129;TEF:1.83745743312;ESRRA:1.63403163761;NKX2-3_NKX2-5:1.58742644239;T:1.27713329199;LMO2:1.13516868517;ONECUT1,2:1.13363280438;NR5A1,2:1.09641475847;RFX2..5_RFXANK_RFXAP:1.02026882141;XCPE1{core}:0.910098734991;PAX1,9:0.892164729661;SP1:0.890808759577;TEAD1:0.841689261752;CDC5L:0.804054219868;HOX{A6,A7,B6,B7}:0.794472280534;HOX{A5,B5}:0.794455314793;MYOD1:0.792190615624;ARID5B:0.789980712968;NKX2-1,4:0.787504148864;UFEwm:0.764245899515;HAND1,2:0.7139544852;FOX{I1,J2}:0.712632729556;ZBTB16:0.668587349214;NFY{A,B,C}:0.658300859907;NR6A1:0.649172770334;AIRE:0.611155831529;STAT5{A,B}:0.607021242685;LHX3,4:0.570248268373;NRF1:0.530028644009;PAX5:0.464642088202;TP53:0.424709550115;POU3F1..4:0.417428378262;ESR1:0.400927028496;SOX17:0.399687727423;ELK1,4_GABP{A,B1}:0.398617777651;VSX1,2:0.392544807908;FOXM1:0.367956024493;HSF1,2:0.365013089718;FOXD3:0.333965217844;IKZF1:0.329965607159;HMX1:0.302530889803;TBX4,5:0.280306780145;GFI1B:0.25721003773;TFAP4:0.253759985607;HNF4A_NR2F1,2:0.249394641747;NANOG:0.242653124564;PAX4:0.234740505571;HOX{A4,D4}:0.231222029488;POU1F1:0.219590002818;SOX{8,9,10}:0.179871850118;OCT4_SOX2{dimer}:0.1594756356;PDX1:0.15911265024;RXRA_VDR{dimer}:0.129956882848;AR:0.0904557598602;IKZF2:0.0893473733751;MTF1:0.0845842695334;YY1:0.0702359305458;E2F1..5:0.0667828304799;PBX1:0.0667471515963;ATF6:0.0614750130847;RBPJ:0.0529167343287;ZIC1..3:0.0483080022811;ZNF143:0.00670201690694;HNF1A:-0.00753719237641;NKX2-2,8:-0.0168640674652;CDX1,2,4:-0.0514412169989;TFCP2:-0.0520183187155;SPZ1:-0.0561382971251;ZNF148:-0.0590689854755;NKX3-2:-0.0600735978052;RFX1:-0.0619477130445;PPARG:-0.0764157208419;FOXA2:-0.0857045950728;ZNF384:-0.0938054630239;PITX1..3:-0.105635812191;NFIX:-0.117135583671;FOS_FOS{B,L1}_JUN{B,D}:-0.120601601731;NR3C1:-0.12292894152;MYB:-0.128851506261;POU6F1:-0.129534706145;SOX5:-0.146262216426;FOXL1:-0.155754431009;ALX4:-0.159008225329;LEF1_TCF7_TCF7L1,2:-0.179889122613;SOX2:-0.181984545286;TOPORS:-0.197385792401;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.20689932639;FOX{F1,F2,J1}:-0.225994762271;BACH2:-0.227354989829;KLF4:-0.230090433798;POU2F1..3:-0.232483654268;PRRX1,2:-0.243045533747;GZF1:-0.268090672933;GATA6:-0.275394803107;HIC1:-0.299139967612;ZNF423:-0.30020173611;ALX1:-0.303173139471;REST:-0.310253043776;ZFP161:-0.313974162978;FOSL2:-0.316943069247;ATF5_CREB3:-0.321052636761;NFE2:-0.321767521676;EVI1:-0.324812200005;NFKB1_REL_RELA:-0.327028344491;TBP:-0.349124919392;HBP1_HMGB_SSRP1_UBTF:-0.350200564882;ZBTB6:-0.365939395299;GFI1:-0.368853389673;bHLH_family:-0.372770589628;TFAP2B:-0.381340605459;CRX:-0.392367979086;TFDP1:-0.401365599889;HOXA9_MEIS1:-0.409138230121;FOXN1:-0.417466173577;NKX3-1:-0.419573550944;PAX8:-0.437814879388;PAX2:-0.441370892981;NKX6-1,2:-0.450286469987;BPTF:-0.473056861368;TAL1_TCF{3,4,12}:-0.478807942398;TLX1..3_NFIC{dimer}:-0.490654131839;SPI1:-0.504333514053;CUX2:-0.50495743443;HLF:-0.512789162094;NFIL3:-0.522602523317;IRF7:-0.52519714489;FOX{D1,D2}:-0.532552508732;SRF:-0.532921159317;MEF2{A,B,C,D}:-0.549133646413;SPIB:-0.551323421036;JUN:-0.553221862497;EN1,2:-0.559023378313;DBP:-0.566371084915;NFE2L1:-0.574881717491;NHLH1,2:-0.577624478422;ETS1,2:-0.577764293498;PAX3,7:-0.604093755349;GTF2A1,2:-0.609765689129;EP300:-0.613097320469;TFAP2{A,C}:-0.624996301232;RORA:-0.625208772034;ATF4:-0.633643633429;ATF2:-0.633656013939;ELF1,2,4:-0.661142463979;NFE2L2:-0.679034154911;GCM1,2:-0.688390577911;SREBF1,2:-0.69046237666;CEBPA,B_DDIT3:-0.706998741229;GTF2I:-0.723406422418;MYBL2:-0.739082906245;DMAP1_NCOR{1,2}_SMARC:-0.754089226765;MAZ:-0.755642228357;MED-1{core}:-0.768549853252;RUNX1..3:-0.771913332564;NR1H4:-0.783526333917;STAT2,4,6:-0.785677224079;AHR_ARNT_ARNT2:-0.796401915527;GATA4:-0.80274966587;EBF1:-0.808098634282;HES1:-0.809797355968;HMGA1,2:-0.815202001175;PRDM1:-0.832882548157;FOXP1:-0.842857768706;EGR1..3:-0.856437510182;FOXO1,3,4:-0.85938658444;FOXP3:-0.892541058419;CREB1:-0.909438539379;XBP1:-0.936699249054;TGIF1:-0.946703679197;RREB1:-0.950274579527;IRF1,2:-0.963705010704;MYFfamily:-0.978390190358;BREu{core}:-1.02359398242;TLX2:-1.05203923087;ADNP_IRX_SIX_ZHX:-1.0675321338;MZF1:-1.09319218703;PATZ1:-1.09601772018;MTE{core}:-1.10483033036;POU5F1:-1.11801676495;STAT1,3:-1.15443869038;HIF1A:-1.18939277722;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.21635282236;PAX6:-1.21778282775;MAFB:-1.23452472598;ZNF238:-1.30974097725;NANOG{mouse}:-1.38849479864;RXR{A,B,G}:-1.43948850088;NFATC1..3:-1.45460559358;SMAD1..7,9:-1.49244330549;GLI1..3:-1.57507411941
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10643-109A4;search_select_hide=table117:FF:10643-109A4
}}
}}

Latest revision as of 14:32, 3 June 2020

Name:endometrioid adenocarcinoma cell line:JHUEM-1
Species:Human (Homo sapiens)
Library ID:CNhs11748
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueuterus
dev stageNA
sexfemale
age56
cell typeunclassifiable
cell lineJHUEM-1
companyRIKEN Bioresource centre
collaborationYukio Nakamura (RIKEN BRC)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005162
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11748 CAGE DRX007878 DRR008750
Accession ID Hg19

Library idBAMCTSS
CNhs11748 DRZ000175 DRZ001560
Accession ID Hg38

Library idBAMCTSS
CNhs11748 DRZ011525 DRZ012910
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.201
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.185
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural-0.00566
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.113
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.369
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.0577
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.143
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0.129
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0.409
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0.0127
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.0374
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory-7.712362e-4
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.0277
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0.0695
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40.129
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.0109
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.178
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11748

Jaspar motifP-value
MA0002.20.285
MA0003.10.921
MA0004.10.158
MA0006.10.116
MA0007.10.206
MA0009.10.0984
MA0014.10.0565
MA0017.10.236
MA0018.20.00864
MA0019.10.8
MA0024.10.544
MA0025.10.718
MA0027.10.991
MA0028.10.158
MA0029.10.741
MA0030.10.286
MA0031.10.145
MA0035.20.621
MA0038.10.457
MA0039.26.86199e-4
MA0040.10.535
MA0041.10.858
MA0042.10.414
MA0043.10.00883
MA0046.10.817
MA0047.20.684
MA0048.10.913
MA0050.11.17834e-6
MA0051.13.50915e-4
MA0052.14.93576e-4
MA0055.10.00107
MA0057.10.3
MA0058.10.0304
MA0059.10.374
MA0060.11.14902e-5
MA0061.10.0197
MA0062.20.715
MA0065.20.014
MA0066.10.41
MA0067.10.00864
MA0068.12.62603e-6
MA0069.10.15
MA0070.10.837
MA0071.10.548
MA0072.10.807
MA0073.10.418
MA0074.10.957
MA0076.10.489
MA0077.10.158
MA0078.10.543
MA0079.20.349
MA0080.22.38813e-7
MA0081.10.0225
MA0083.10.179
MA0084.10.205
MA0087.10.44
MA0088.10.542
MA0090.10.00122
MA0091.10.105
MA0092.10.466
MA0093.10.114
MA0099.27.57555e-6
MA0100.10.503
MA0101.10.0095
MA0102.20.00872
MA0103.18.14226e-11
MA0104.20.259
MA0105.10.229
MA0106.10.0443
MA0107.10.00179
MA0108.20.133
MA0111.10.78
MA0112.20.0315
MA0113.10.756
MA0114.10.013
MA0115.10.135
MA0116.10.844
MA0117.10.218
MA0119.10.752
MA0122.10.122
MA0124.10.0507
MA0125.10.685
MA0131.10.783
MA0135.10.216
MA0136.11.38143e-5
MA0137.21.86253e-4
MA0138.20.811
MA0139.10.29
MA0140.10.756
MA0141.10.00281
MA0142.10.0693
MA0143.10.0546
MA0144.10.031
MA0145.10.0832
MA0146.10.0135
MA0147.10.499
MA0148.10.436
MA0149.10.0781
MA0150.10.00166
MA0152.10.169
MA0153.10.639
MA0154.10.934
MA0155.10.7
MA0156.11.65923e-4
MA0157.10.364
MA0159.10.0232
MA0160.10.162
MA0162.10.401
MA0163.10.688
MA0164.10.305
MA0258.10.176
MA0259.10.45



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11748

Novel motifP-value
10.17
100.569
1000.0496
1010.307
1020.243
1030.128
1040.218
1050.987
1060.477
1070.755
1080.279
1090.00735
110.62
1100.0984
1110.72
1120.39
1130.0383
1140.652
1150.225
1160.863
1170.209
1180.391
1190.743
120.0431
1200.302
1210.254
1220.521
1230.0944
1240.614
1250.96
1260.571
1270.491
1280.194
1290.111
130.00997
1300.99
1310.329
1320.265
1330.186
1340.153
1350.168
1360.00373
1370.588
1380.396
1390.747
140.775
1400.444
1410.381
1420.926
1430.312
1440.559
1450.771
1460.927
1470.392
1480.405
1490.422
150.607
1500.782
1510.412
1520.33
1530.102
1540.396
1550.106
1560.94
1570.855
1580.284
1590.603
160.0843
1600.551
1610.532
1620.14
1630.512
1640.399
1650.835
1660.85
1670.472
1680.324
1690.0854
170.242
180.354
190.899
20.479
200.572
210.747
220.534
230.822
240.137
250.921
260.529
270.479
280.811
290.727
30.839
300.527
310.727
320.659
330.372
340.309
350.29
360.829
370.374
380.419
390.85
40.248
400.124
410.0833
420.734
430.883
440.00916
450.79
460.694
470.344
480.622
490.636
50.617
500.578
510.627
520.798
530.318
540.756
550.418
560.744
570.777
580.785
590.964
60.569
600.997
610.249
620.824
630.365
640.667
650.797
660.0224
670.87
680.0308
690.519
70.405
700.452
710.725
720.359
730.0755
740.375
750.125
760.772
770.179
780.125
790.383
80.381
800.00489
810.844
820.841
830.788
840.341
850.382
860.619
870.0434
880.353
890.0821
90.211
900.125
910.0889
920.534
930.442
940.345
950.0112
960.352
970.895
980.301
990.272



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11748


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000499 (stromal cell)
0000255 (eukaryotic cell)
0002076 (endo-epithelial cell)
0002149 (epithelial cell of uterus)
0002255 (stromal cell of endometrium)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
193 (reproductive organ cancer)
305 (carcinoma)
120 (female reproductive organ cancer)
299 (adenocarcinoma)
3001 (female reproductive endometrioid cancer)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000995 (uterus)
0002384 (connective tissue)
0003134 (female reproductive organ)
0000479 (tissue)
0005156 (reproductive structure)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003133 (reproductive organ)
0003975 (internal female genitalia)
0004175 (internal genitalia)
0010317 (germ layer / neural crest derived structure)
0003100 (female organism)
0000474 (female reproductive system)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100297 (carcinoma cell line sample)
0101120 (epithelial cell line sample)
0100167 (adenocarcinoma cell line sample)
0100658 (uterine adenocarcinoma cell sample)
0101555 (endometrial cancer cell line sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000223 (endodermal cell)
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0005795 (embryonic uterus)
UBERON:0010316 (germ layer / neural crest)

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