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{{f5samples
{{f5samples
|DRA_sample_Accession=CAGE@SAMD00005974
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005974
|accession_numbers=CAGE;DRX008220;DRR009092;DRZ000517;DRZ001902;DRZ011867;DRZ013252
|accession_numbers_RNASeq=sRNA-Seq;DRX037034;DRR041400;DRZ007042
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0001637,UBERON:0000483,UBERON:0000479,UBERON:0000055,UBERON:0004111,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0003914,UBERON:0000025,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0000490,UBERON:0006914,UBERON:0000487,UBERON:0003509,UBERON:0004638,UBERON:0003915,UBERON:0004700,UBERON:0007500,UBERON:0001981,UBERON:0002049,UBERON:0001986,UBERON:0010317,UBERON:0007798,UBERON:0004852,UBERON:0001917,UBERON:0004535,UBERON:0004572,UBERON:0004537,UBERON:0001009
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0001637,UBERON:0000483,UBERON:0000479,UBERON:0000055,UBERON:0004111,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0003914,UBERON:0000025,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0000490,UBERON:0006914,UBERON:0000487,UBERON:0003509,UBERON:0004638,UBERON:0003915,UBERON:0004700,UBERON:0007500,UBERON:0001981,UBERON:0002049,UBERON:0001986,UBERON:0010317,UBERON:0007798,UBERON:0004852,UBERON:0001917,UBERON:0004535,UBERON:0004572,UBERON:0004537,UBERON:0001009
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000076,CL:0002139,CL:0000213,CL:0002078,CL:0000215,CL:0000255,CL:0000115,CL:0000071,CL:1000413
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000076,CL:0002139,CL:0000213,CL:0002078,CL:0000215,CL:0000255,CL:0000115,CL:0000071,CL:1000413
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|created_by=
|created_by=
|creation_date=
|creation_date=
|datafreeze_phase=1
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|expression_enrichment_score=chr20:62680984..62680999,-!p1@SOX18!2.35!291.55!SOX18;;chr21:39870339..39870443,-!p1@ERG!2.03!106.13!ERG;;chr8:10588010..10588030,-!p1@SOX7!1.98!95.23!SOX7;;chr8:55370487..55370503,+!p1@SOX17!1.93!84.74!SOX17;;chr17:6926362..6926377,+!p1@BCL6B!1.82!64.60!BCL6B;;chr1:6479968..6479986,-!p1@HES2!1.71!50.76!HES2;;chr18:53068911..53068935,-!p4@TCF4!1.62!45.31!TCF4;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.53!33.14!ZBED1;;chr11:65429891..65429915,-!p7@RELA!1.45!27.27!RELA;;chr6:34204921..34204939,+!p3@HMGA1!1.44!755.10!HMGA1;;chr12:96588368..96588394,+!p3@ELK3!1.43!67.96!ELK3;;chr6:126070769..126070801,+!p1@HEY2!1.43!29.78!HEY2;;chr19:13213511..13213545,-!p2@LYL1!1.43!28.11!LYL1;;chr18:19749541..19749557,+!p1@GATA6!1.41!75.09!GATA6;;chr10:94449703..94449718,+!p1@HHEX!1.37!85.58!HHEX;;chr19:13213399..13213414,-!p6@LYL1!1.25!16.78!LYL1;;chr8:11561684..11561751,+!p1@GATA4!1.25!16.78!GATA4;;chr16:86600426..86600441,+!p1@FOXC2!1.23!39.01!FOXC2;;chr5:92918919..92918942,+!p1@NR2F1!1.19!63.76!NR2F1;;chr3:128206762..128206781,-!p2@GATA2!1.12!75.09!GATA2;;chr20:6748325..6748352,+!p1@BMP2!1.11!17.20!BMP2;;chr7:35293685..35293718,-!p1@TBX20!1.08!10.91!TBX20;;chr19:13213555..13213568,-!p5@LYL1!1.06!10.49!LYL1;;chr12:66218255..66218304,+!p3@HMGA2!1.05!28.11!HMGA2;;chr3:169381420..169381535,-!p1@MECOM!1.01!10.91!MECOM;;chr2:237077022..237077038,-!p1@GBX2!1.01!9.23!GBX2;;chr19:13213662..13213686,-!p1@LYL1!1.00!13.42!LYL1;;chr15:83953397..83953425,-!p1@BNC1!0.99!10.07!BNC1;;chr9:16705069..16705086,-!p3@BNC2!0.97!8.39!BNC2;;chr1:47695003..47695042,-!p2@TAL1!0.97!8.39!TAL1;;chr6:10412600..10412637,-!p1@TFAP2A!0.95!13.42!TFAP2A;;chr4:174451370..174451387,-!p1@HAND2!0.95!7.97!HAND2;;chr17:46655672..46655697,-!p3@HOXB4!0.93!7.55!HOXB4;;chr1:200008734..200008765,+!p2@NR5A2!0.93!7.55!NR5A2;;chr7:149470641..149470694,-!p1@ZNF467!0.91!33.98!ZNF467;;chr20:42543441..42543497,+!p1@TOX2!0.91!33.56!TOX2;;chr12:66218212..66218244,+!p5@HMGA2!0.91!10.49!HMGA2;;chr10:31288370..31288393,-!p3@ZNF438!0.91!7.13!ZNF438;;chr14:38064429..38064486,-!p1@FOXA1!0.91!7.13!FOXA1;;chr17:8027418..8027432,-!p1@HES7!0.91!7.13!HES7;;chr18:53177984..53178004,-!p17@TCF4!0.91!7.13!TCF4;;chr11:65430554..65430579,-!p3@RELA!0.90!18.46!RELA;;chr4:57522166..57522260,-!p2@HOPX!0.90!7.97!HOPX;;chr19:46801639..46801699,+!p1@HIF3A!0.89!6.71!HIF3A;;chr18:22932080..22932170,-!p1@ZNF521!0.87!28.95!ZNF521;;chr20:42543506..42543549,+!p2@TOX2!0.86!15.52!TOX2;;chr6:34204672..34204692,+!p1@HMGA1!0.85!724.06!HMGA1;;chr10:94449675..94449694,+!p2@HHEX!0.85!17.20!HHEX;;chr15:96876966..96877017,+!p12@NR2F2!0.84!8.81!NR2F2;;chr18:53068982..53068993,-!p20@TCF4!0.84!5.87!TCF4;;chr5:92918956..92918969,+!p4@NR2F1!0.83!6.29!NR2F1;;chr1:151032860..151032918,+!p1@MLLT11!0.82!72.15!MLLT11;;chr12:66218183..66218209,+!p4@HMGA2!0.82!11.33!HMGA2;;chr6:85474299..85474324,-!p1@TBX18!0.81!10.07!TBX18;;chr5:92918894..92918912,+!p2@NR2F1!0.80!18.46!NR2F1;;chr19:1652555..1652568,-!p2@TCF3!0.79!22.65!TCF3;;chr20:50721803..50721857,-!p2@ZFP64!0.79!8.39!ZFP64;;chr18:19749386..19749404,+!p2@GATA6!0.79!7.55!GATA6;;chr15:96874012..96874042,+!p2@NR2F2!0.78!49.08!NR2F2;;chr7:26191809..26191890,+!p1@NFE2L3!0.78!26.85!NFE2L3;;chr6:10415276..10415341,-!p2@TFAP2A!0.78!6.29!TFAP2A;;chr8:55370720..55370733,+!p2@SOX17!0.78!5.03!SOX17;;chr18:53068940..53068951,-!p21@TCF4!0.78!5.03!TCF4;;chr3:25469815..25469866,+!p3@RARB!0.78!5.03!RARB;;chr4:57522598..57522664,-!p3@HOPX!0.78!5.03!HOPX;;chr17:3571863..3571881,-!p1@TAX1BP3!0.77!382.58!TAX1BP3;;chr2:85981222..85981259,+!p2@ATOH8!0.77!8.39!ATOH8;;chr3:168864315..168864339,-!p2@MECOM!0.77!8.39!MECOM;;chr15:96873984..96873999,+!p3@NR2F2!0.76!38.59!NR2F2;;chr12:66218598..66218645,+!p2@HMGA2!0.76!23.91!HMGA2;;chr2:46524537..46524553,+!p1@EPAS1!0.75!510.11!EPAS1;;chr17:41623692..41623715,-!p1@ETV4!0.75!21.39!ETV4;;chr19:56152332..56152347,+!p4@ZNF580!0.75!11.33!ZNF580;;chr8:37963466..37963506,+!p3@ASH2L!0.75!5.87!ASH2L;;chr7:115670804..115670825,-!p1@TFEC!0.75!4.61!TFEC;;chr7:139741594..139741615,-!p5@PARP12!0.75!4.61!PARP12;;chr14:74256787..74256858,-!p6@C14orf43!0.75!4.61!C14orf43;;chr17:6926381..6926392,+!p2@BCL6B!0.75!4.61!BCL6B;;chr11:128563948..128564003,+!p1@FLI1!0.74!60.83!FLI1;;chr3:178789522..178789564,-!p2@ZMAT3!0.74!36.92!ZMAT3;;chr9:14314131..14314147,-!p2@NFIB!0.74!27.69!NFIB;;chr11:65667884..65667895,-!p2@FOSL1!0.74!19.30!FOSL1;;chr8:106330656..106330684,+!p1@ZFPM2!0.72!12.17!ZFPM2;;chr15:66994561..66994597,+!p2@SMAD6!0.72!10.91!SMAD6;;chr19:13213465..13213478,-!p7@LYL1!0.72!4.19!LYL1;;chr4:57522674..57522699,-!p5@HOPX!0.72!4.19!HOPX;;chr6:28321971..28321995,-!p1@ZNF323!0.72!4.19!ZNF323;;chr12:3068544..3068597,+!p1@TEAD4!0.71!27.69!TEAD4;;chr2:74730430..74730451,-!p1@LBX2!0.71!7.13!LBX2;;chr19:49864746..49864780,-!p2@TEAD2!0.71!5.87!TEAD2;;chr8:106330696..106330719,+!p2@ZFPM2!0.71!5.45!ZFPM2;;chr15:96873921..96873946,+!p1@NR2F2!0.70!130.04!NR2F2;;chr17:41622925..41622976,-!p3@ETV4!0.70!6.29!ETV4;;chr17:46655704..46655718,-!p2@HOXB4!0.70!6.29!HOXB4;;chr18:19749517..19749531,+!p3@GATA6!0.69!7.55!GATA6;;chr5:92920456..92920488,+!p9@NR2F1!0.69!4.61!NR2F1;;chr6:21593973..21593988,+!p1@SOX4!0.68!158.99!SOX4;;chr3:37217736..37217753,-!p2@LRRFIP2!0.68!18.04!LRRFIP2;;chr15:96874145..96874166,+!p7@NR2F2!0.68!7.97!NR2F2;;chr1:170633348..170633399,+!p2@PRRX1!0.68!5.45!PRRX1;;chr1:47696918..47696935,-!p6@TAL1!0.68!3.78!TAL1;;chr1:61869752..61869782,+!p13@NFIA!0.68!3.78!NFIA;;chr16:86600870..86600921,+!p2@FOXC2!0.68!3.78!FOXC2;;chr2:237076992..237077008,-!p2@GBX2!0.68!3.78!GBX2;;chr3:25470156..25470227,+!p2@RARB!0.68!3.78!RARB;;chr4:2263809..2263854,-!p1@MXD4!0.67!164.44!MXD4;;chr22:38597987..38598021,+!p2@MAFF!0.67!25.59!MAFF;;chr11:65667846..65667868,-!p1@FOSL1!0.66!109.49!FOSL1;;chr19:49865646..49865718,-!p1@TEAD2!0.66!35.24!TEAD2;;chr14:21566540..21566580,-!p2@ZNF219!0.66!5.03!ZNF219;;chr9:14314106..14314119,-!p5@NFIB!0.65!6.71!NFIB;;chr15:96874244..96874259,+!p5@NR2F2!0.64!9.23!NR2F2;;chr18:53068893..53068902,-!p28@TCF4!0.64!3.36!TCF4;;chr5:92919452..92919496,+!p11@NR2F1!0.64!3.36!NR2F1;;chr1:200011711..200011752,+!p3@NR5A2!0.64!3.36!NR5A2;;chr4:174450089..174450153,-!p2@HAND2!0.64!3.36!HAND2;;chr1:23885981..23886002,-!p1@ID3!0.63!690.08!ID3;;chr18:51750839..51750885,-!p2@MBD2!0.63!38.59!MBD2;;chr1:158979792..158979814,+!p2@IFI16!0.63!36.50!IFI16;;chr15:96873861..96873872,+!p9@NR2F2!0.63!7.55!NR2F2;;chr19:53496768..53496799,-!p1@ZNF702P!0.63!5.45!ZNF702P;;chr12:66218836..66218888,+!p1@HMGA2!0.62!34.82!HMGA2;;chr17:1958388..1958404,+!p1@HIC1!0.62!23.91!HIC1;;chr2:85360499..85360598,+!p1@TCF7L1!0.62!20.97!TCF7L1;;chr9:35732647..35732678,+!p2@CREB3!0.62!20.56!CREB3;;chr11:65686732..65686756,+!p2@DRAP1!0.62!15.52!DRAP1;;chr22:41697497..41697515,+!p2@ZC3H7B!0.62!10.07!ZC3H7B;;chr10:31288398..31288455,-!p2@ZNF438!0.62!3.78!ZNF438;;chr11:65430535..65430549,-!p4@RELA!0.62!3.78!RELA;;chr8:128749984..128750033,+!p4@MYC!0.61!13.00!MYC;;chr12:3068501..3068515,+!p4@TEAD4!0.61!5.87!TEAD4;;chr1:158985493..158985535,+!p4@IFI16!0.61!5.03!IFI16;;chr9:35732514..35732530,+!p5@CREB3!0.61!4.61!CREB3;;chr10:8096772..8096787,+!p2@GATA3!0.61!3.78!GATA3;;chr12:66218152..66218174,+!p10@HMGA2!0.61!3.36!HMGA2;;chr17:4890695..4890773,-!p2@CAMTA2!0.60!10.91!CAMTA2;;chr1:151032922..151032951,+!p2@MLLT11!0.60!5.45!MLLT11;;chr6:1610293..1610310,+!p1@FOXC1!0.60!5.45!FOXC1;;chr6:85473156..85473210,-!p2@TBX18!0.60!3.78!TBX18;;chr15:83953373..83953386,-!p2@BNC1!0.60!2.94!BNC1;;chr18:19749504..19749515,+!p5@GATA6!0.60!2.94!GATA6;;chr13:41240717..41240735,-!p2@FOXO1!0.59!23.91!FOXO1;;chr16:29819446..29819471,+!p9@MAZ!0.59!10.07!MAZ;;chr18:77155922..77155939,+!p1@NFATC1!0.59!9.23!NFATC1;;chr7:100076765..100076861,-!p1@TSC22D4!0.58!120.82!TSC22D4;;chr6:44233252..44233296,-!p1@NFKBIE!0.58!33.98!NFKBIE;;chr11:65687222..65687240,+!p7@DRAP1!0.58!3.78!DRAP1;;chr11:62368696..62368759,-!p4@MTA2!0.57!20.56!MTA2;;chr14:74226961..74227020,-!p1@C14orf43!0.56!21.39!C14orf43;;chr12:3069037..3069119,+!p2@TEAD4!0.56!10.91!TEAD4;;chr2:242576431..242576458,-!p3@THAP4!0.56!7.55!THAP4;;chr7:100076723..100076737,-!p3@TSC22D4!0.56!4.61!TSC22D4;;chr3:25469724..25469773,+!p1@RARB!0.56!4.19!RARB;;chr2:46602901..46602926,+!p7@EPAS1!0.56!3.78!EPAS1;;chr5:92919100..92919135,+!p3@NR2F1!0.56!3.36!NR2F1;;chr15:67357924..67357952,+!p2@SMAD3!0.55!20.97!SMAD3;;chr17:41623009..41623053,-!p4@ETV4!0.55!4.61!ETV4;;chr2:85980951..85981004,+!p1@ATOH8!0.55!4.61!ATOH8;;chr3:21792585..21792625,-!p2@ZNF385D!0.55!2.94!ZNF385D;;chr5:92918860..92918871,+!p10@NR2F1!0.55!2.94!NR2F1;;chr7:27153454..27153469,-!p2@HOXA3!0.55!2.52!HOXA3;;chr3:147111198..147111225,+!p4@ZIC1!0.55!2.52!ZIC1;;chr3:21792631..21792665,-!p3@ZNF385D!0.55!2.52!ZNF385D;;chr4:57522513..57522548,-!p4@HOPX!0.55!2.52!HOPX;;chr1:47697539..47697573,-!p3@TAL1!0.55!2.52!TAL1;;chr16:30406423..30406447,+!p4@ZNF48!0.55!2.52!ZNF48;;chr16:86600458..86600461,+!p3@FOXC2!0.55!2.52!FOXC2;;chr15:67358163..67358192,+!p1@SMAD3!0.54!73.83!SMAD3;;chr11:47236489..47236567,+!p2@DDB2!0.54!43.21!DDB2;;chr17:38498594..38498661,+!p2@RARA!0.54!10.07!RARA;;chr16:1429627..1429662,-!p2@UNKL!0.54!8.81!UNKL;;chr19:56652686..56652701,+!p3@ZNF444!0.54!5.03!ZNF444;;chr19:19303794..19303805,+!p5@RFXANK!0.54!2.94!RFXANK;;chr9:14314566..14314618,-!p1@NFIB!0.53!36.50!NFIB;;chr19:45908292..45908374,-!p1@PPP1R13L!0.53!26.85!PPP1R13L;;chr18:51750888..51750920,-!p3@MBD2!0.53!21.81!MBD2;;chr20:48599506..48599526,+!p1@SNAI1!0.53!19.30!SNAI1;;chr11:113930425..113930471,+!p1@ZBTB16!0.53!3.78!ZBTB16;;chr19:13136130..13136165,+!p6@NFIX!0.53!3.36!NFIX;;chr1:221052840..221052875,+!p4@HLX!0.53!2.94!HLX;;chr17:7590797..7590815,-!p1@TP53!0.52!130.04!TP53;;chr8:128748308..128748324,+!p2@MYC!0.52!83.06!MYC;;chr20:42295745..42295765,+!p1@MYBL2!0.52!49.08!MYBL2;;chr13:72441315..72441454,-!p1@DACH1!0.52!5.45!DACH1;;chr12:124873357..124873401,-!p1@NCOR2!0.51!33.56!NCOR2;;chr5:321810..321877,+!p1@AHRR!0.51!8.81!AHRR;;chr1:221052776..221052799,+!p1@HLX!0.51!4.61!HLX;;chr1:41827095..41827155,+!p1@FOXO6!0.51!3.36!FOXO6;;chr12:30681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6.29!HOXB4;;chr18:19749517..19749531,+!p3@GATA6!0.69!7.55!GATA6;;chr5:92920456..92920488,+!p9@NR2F1!0.69!4.61!NR2F1;;chr6:21593973..21593988,+!p1@SOX4!0.68!158.99!SOX4;;chr3:37217736..37217753,-!p2@LRRFIP2!0.68!18.04!LRRFIP2;;chr15:96874145..96874166,+!p7@NR2F2!0.68!7.97!NR2F2;;chr1:170633348..170633399,+!p2@PRRX1!0.68!5.45!PRRX1;;chr1:47696918..47696935,-!p6@TAL1!0.68!3.78!TAL1;;chr1:61869752..61869782,+!p13@NFIA!0.68!3.78!NFIA;;chr16:86600870..86600921,+!p2@FOXC2!0.68!3.78!FOXC2;;chr2:237076992..237077008,-!p2@GBX2!0.68!3.78!GBX2;;chr3:25470156..25470227,+!p2@RARB!0.68!3.78!RARB;;chr4:2263809..2263854,-!p1@MXD4!0.67!164.44!MXD4;;chr22:38597987..38598021,+!p2@MAFF!0.67!25.59!MAFF;;chr11:65667846..65667868,-!p1@FOSL1!0.66!109.49!FOSL1;;chr19:49865646..49865718,-!p1@TEAD2!0.66!35.24!TEAD2;;chr14:21566540..21566580,-!p2@ZNF219!0.66!5.03!ZNF219;;chr9:14314106..14314119,-!p5@NFIB!0.65!6.71!NFIB;;chr15:96874244..96874259,+!p5@NR2F2!0.64!9.23!NR2F2;;chr18:53068893..53068902,-!p28@TCF4!0.64!3.36!TCF4;;chr5:92919452..92919496,+!p11@NR2F1!0.64!3.36!NR2F1;;chr1:200011711..200011752,+!p3@NR5A2!0.64!3.36!NR5A2;;chr4:174450089..174450153,-!p2@HAND2!0.64!3.36!HAND2;;chr1:23885981..23886002,-!p1@ID3!0.63!690.08!ID3;;chr18:51750839..51750885,-!p2@MBD2!0.63!38.59!MBD2;;chr1:158979792..158979814,+!p2@IFI16!0.63!36.50!IFI16;;chr15:96873861..96873872,+!p9@NR2F2!0.63!7.55!NR2F2;;chr19:53496768..53496799,-!p1@ZNF702P!0.63!5.45!ZNF702P;;chr12:66218836..66218888,+!p1@HMGA2!0.62!34.82!HMGA2;;chr17:1958388..1958404,+!p1@HIC1!0.62!23.91!HIC1;;chr2:85360499..85360598,+!p1@TCF7L1!0.62!20.97!TCF7L1;;chr9:35732647..35732678,+!p2@CREB3!0.62!20.56!CREB3;;chr11:65686732..65686756,+!p2@DRAP1!0.62!15.52!DRAP1;;chr22:41697497..41697515,+!p2@ZC3H7B!0.62!10.07!ZC3H7B;;chr10:31288398..31288455,-!p2@ZNF438!0.62!3.78!ZNF438;;chr11:65430535..65430549,-!p4@RELA!0.62!3.78!RELA;;chr8:128749984..128750033,+!p4@MYC!0.61!13.00!MYC;;chr12:3068501..3068515,+!p4@TEAD4!0.61!5.87!TEAD4;;chr1:158985493..158985535,+!p4@IFI16!0.61!5.03!IFI16;;chr9:35732514..35732530,+!p5@CREB3!0.61!4.61!CREB3;;chr10:8096772..8096787,+!p2@GATA3!0.61!3.78!GATA3;;chr12:66218152..66218174,+!p10@HMGA2!0.61!3.36!HMGA2;;chr17:4890695..4890773,-!p2@CAMTA2!0.60!10.91!CAMTA2;;chr1:151032922..151032951,+!p2@MLLT11!0.60!5.45!MLLT11;;chr6:1610293..1610310,+!p1@FOXC1!0.60!5.45!FOXC1;;chr6:85473156..85473210,-!p2@TBX18!0.60!3.78!TBX18;;chr15:83953373..83953386,-!p2@BNC1!0.60!2.94!BNC1;;chr18:19749504..19749515,+!p5@GATA6!0.60!2.94!GATA6;;chr13:41240717..41240735,-!p2@FOXO1!0.59!23.91!FOXO1;;chr16:29819446..29819471,+!p9@MAZ!0.59!10.07!MAZ;;chr18:77155922..77155939,+!p1@NFATC1!0.59!9.23!NFATC1;;chr7:100076765..100076861,-!p1@TSC22D4!0.58!120.82!TSC22D4;;chr6:44233252..44233296,-!p1@NFKBIE!0.58!33.98!NFKBIE;;chr11:65687222..65687240,+!p7@DRAP1!0.58!3.78!DRAP1;;chr11:62368696..62368759,-!p4@MTA2!0.57!20.56!MTA2;;chr14:74226961..74227020,-!p1@C14orf43!0.56!21.39!C14orf43;;chr12:3069037..3069119,+!p2@TEAD4!0.56!10.91!TEAD4;;chr2:242576431..242576458,-!p3@THAP4!0.56!7.55!THAP4;;chr7:100076723..100076737,-!p3@TSC22D4!0.56!4.61!TSC22D4;;chr3:25469724..25469773,+!p1@RARB!0.56!4.19!RARB;;chr2:46602901..46602926,+!p7@EPAS1!0.56!3.78!EPAS1;;chr5:92919100..92919135,+!p3@NR2F1!0.56!3.36!NR2F1;;chr15:67357924..67357952,+!p2@SMAD3!0.55!20.97!SMAD3;;chr17:41623009..41623053,-!p4@ETV4!0.55!4.61!ETV4;;chr2:85980951..85981004,+!p1@ATOH8!0.55!4.61!ATOH8;;chr3:21792585..21792625,-!p2@ZNF385D!0.55!2.94!ZNF385D;;chr5:92918860..92918871,+!p10@NR2F1!0.55!2.94!NR2F1;;chr7:27153454..27153469,-!p2@HOXA3!0.55!2.52!HOXA3;;chr3:147111198..147111225,+!p4@ZIC1!0.55!2.52!ZIC1;;chr3:21792631..21792665,-!p3@ZNF385D!0.55!2.52!ZNF385D;;chr4:57522513..57522548,-!p4@HOPX!0.55!2.52!HOPX;;chr1:47697539..47697573,-!p3@TAL1!0.55!2.52!TAL1;;chr16:30406423..30406447,+!p4@ZNF48!0.55!2.52!ZNF48;;chr16:86600458..86600461,+!p3@FOXC2!0.55!2.52!FOXC2;;chr15:67358163..67358192,+!p1@SMAD3!0.54!73.83!SMAD3;;chr11:47236489..47236567,+!p2@DDB2!0.54!43.21!DDB2;;chr17:38498594..38498661,+!p2@RARA!0.54!10.07!RARA;;chr16:1429627..1429662,-!p2@UNKL!0.54!8.81!UNKL;;chr19:56652686..56652701,+!p3@ZNF444!0.54!5.03!ZNF444;;chr19:19303794..19303805,+!p5@RFXANK!0.54!2.94!RFXANK;;chr9:14314566..14314618,-!p1@NFIB!0.53!36.50!NFIB;;chr19:45908292..45908374,-!p1@PPP1R13L!0.53!26.85!PPP1R13L;;chr18:51750888..51750920,-!p3@MBD2!0.53!21.81!MBD2;;chr20:48599506..48599526,+!p1@SNAI1!0.53!19.30!SNAI1;;chr11:113930425..113930471,+!p1@ZBTB16!0.53!3.78!ZBTB16;;chr19:13136130..13136165,+!p6@NFIX!0.53!3.36!NFIX;;chr1:221052840..221052875,+!p4@HLX!0.53!2.94!HLX;;chr17:7590797..7590815,-!p1@TP53!0.52!130.04!TP53;;chr8:128748308..128748324,+!p2@MYC!0.52!83.06!MYC;;chr20:42295745..42295765,+!p1@MYBL2!0.52!49.08!MYBL2;;chr13:72441315..72441454,-!p1@DACH1!0.52!5.45!DACH1;;chr12:124873357..124873401,-!p1@NCOR2!0.51!33.56!NCOR2;;chr5:321810..321877,+!p1@AHRR!0.51!8.81!AHRR;;chr1:221052776..221052799,+!p1@HLX!0.51!4.61!HLX;;chr1:41827095..41827155,+!p1@FOXO6!0.51!3.36!FOXO6;;chr12:30681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|fonse_cell_line=
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Line 38: Line 44:
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|id=FF:11264-116G4
|id=FF:11264-116G4
|is_a=EFO:0002091;;FF:0000047
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|library_id=CNhs12496
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|microRNAs=
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|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11264
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10004.TGACCA.11264
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11264
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|name=Endothelial Cells - Artery, donor1
|name=Endothelial Cells - Artery, donor1
|namespace=FANTOM5
|namespace=FANTOM5
Line 46: Line 65:
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|sample_cell_line=
Line 83: Line 106:
|top_motifs=RXR{A,B,G}:1.88070414889;SOX{8,9,10}:1.48325306298;TLX1..3_NFIC{dimer}:1.28076373042;AR:1.21850874214;bHLH_family:1.13941020419;NFATC1..3:1.13176977334;IKZF1:0.907730964429;TP53:0.866932006866;HIC1:0.863941089482;TFAP2{A,C}:0.833466005924;XCPE1{core}:0.812295297335;ONECUT1,2:0.79993776284;LHX3,4:0.746875477811;TFAP4:0.742935678784;PAX1,9:0.697306727688;ZNF423:0.693964647828;HBP1_HMGB_SSRP1_UBTF:0.684413793112;ZNF148:0.66215895104;GTF2A1,2:0.656032326879;ARID5B:0.617362701134;GZF1:0.613953125979;FOX{I1,J2}:0.610409388246;ETS1,2:0.610088056029;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.578709238263;EBF1:0.575234219608;GATA6:0.570189032407;PAX6:0.566120782217;LEF1_TCF7_TCF7L1,2:0.554315737978;ZBTB6:0.553323408659;ESRRA:0.552973252968;NKX2-2,8:0.486280702217;PAX8:0.470855792796;HOX{A5,B5}:0.462201999625;UFEwm:0.438680241465;PAX5:0.437812520009;SOX17:0.431369573689;SP1:0.408104150089;TFAP2B:0.399076017299;REST:0.392949273912;SPIB:0.377370912266;NR3C1:0.363862357065;ELF1,2,4:0.357680558042;SPZ1:0.348940951831;MTE{core}:0.337736397081;SOX5:0.31420063976;STAT5{A,B}:0.292568698109;ADNP_IRX_SIX_ZHX:0.270354588957;BACH2:0.259557094548;NFE2:0.243338669753;NFE2L1:0.241312007779;POU3F1..4:0.239866764934;NR5A1,2:0.238794413576;PRDM1:0.230422548167;ALX1:0.218654499424;CRX:0.206267895496;HES1:0.198994318457;PPARG:0.196501574661;NANOG:0.190064085928;TEAD1:0.188926940142;TFDP1:0.172994829367;HAND1,2:0.16685404168;RREB1:0.159300058267;ZFP161:0.154348401466;SOX2:0.151946193238;TFCP2:0.149863520206;FOS_FOS{B,L1}_JUN{B,D}:0.148591932944;SMAD1..7,9:0.138761683965;GTF2I:0.12916371604;NKX3-2:0.110869844767;GATA4:0.109245842988;TLX2:0.107637608128;HNF4A_NR2F1,2:0.107218614752;IKZF2:0.084001847209;ZIC1..3:0.0799656513752;GCM1,2:0.07840410928;EN1,2:0.0644430518016;SRF:0.0631540951379;RORA:0.0513833849953;POU2F1..3:0.0261260807821;RXRA_VDR{dimer}:0.019317354226;NHLH1,2:-0.0040683184025;PATZ1:-0.0122659992161;KLF4:-0.0133980222562;GLI1..3:-0.025168915386;FOXL1:-0.0353492902385;SPI1:-0.0383266317824;MED-1{core}:-0.0418561188424;NFE2L2:-0.0537515653276;TBP:-0.0539231994193;ZNF238:-0.0628279059783;MTF1:-0.0743565604749;FOSL2:-0.0869304473916;ZNF143:-0.0908849856716;RBPJ:-0.0985467758926;HMGA1,2:-0.107752934443;EGR1..3:-0.114052591693;MAZ:-0.123110663156;FOXD3:-0.125309466393;NRF1:-0.154913870945;CDC5L:-0.164490011332;GFI1B:-0.167519926495;PITX1..3:-0.176183573347;GFI1:-0.192867427319;FOXA2:-0.198643671583;PBX1:-0.199413730349;STAT2,4,6:-0.202114858043;HNF1A:-0.210308881092;LMO2:-0.220358932428;MYOD1:-0.233639161274;FOXQ1:-0.23719901536;NFKB1_REL_RELA:-0.249978140055;MYB:-0.25028796435;E2F1..5:-0.256701711313;MZF1:-0.260768037022;EVI1:-0.263714858098;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.271220272934;FOXM1:-0.27145325671;HMX1:-0.295273564891;MEF2{A,B,C,D}:-0.329181689777;TAL1_TCF{3,4,12}:-0.330070846504;JUN:-0.364766834491;YY1:-0.370324833554;NANOG{mouse}:-0.378374591629;PRRX1,2:-0.388667891192;DMAP1_NCOR{1,2}_SMARC:-0.396019793319;ATF6:-0.411786013284;TEF:-0.413569602628;HLF:-0.419672752614;SNAI1..3:-0.420893850432;RUNX1..3:-0.420980279684;POU1F1:-0.428387584728;NFY{A,B,C}:-0.434853533345;MAFB:-0.436606037601;ESR1:-0.457635472913;RFX1:-0.482491100321;OCT4_SOX2{dimer}:-0.485838294244;IRF1,2:-0.508661814217;ATF2:-0.518883846339;PAX4:-0.535844412837;IRF7:-0.540686618305;NR1H4:-0.547211964487;FOX{D1,D2}:-0.567591555743;ZEB1:-0.584932268102;PAX2:-0.589149792006;CEBPA,B_DDIT3:-0.608930507085;FOX{F1,F2,J1}:-0.620487163888;PAX3,7:-0.648703784302;BREu{core}:-0.649889708858;TGIF1:-0.655285015756;SREBF1,2:-0.664066572709;HSF1,2:-0.675429901942;ALX4:-0.679324433524;CUX2:-0.712616987068;XBP1:-0.725097192238;ELK1,4_GABP{A,B1}:-0.728249944316;T:-0.746655621751;AIRE:-0.746911133019;EP300:-0.75494671599;NFIX:-0.761409430159;VSX1,2:-0.769142569524;NKX2-3_NKX2-5:-0.787974560189;ZBTB16:-0.798396432295;POU6F1:-0.802509368846;CDX1,2,4:-0.813729380899;NKX2-1,4:-0.819505360156;MYFfamily:-0.820686414945;NR6A1:-0.842910091575;TOPORS:-0.8654242038;FOXO1,3,4:-0.870548326254;POU5F1:-0.884121683392;HOX{A6,A7,B6,B7}:-0.913709432104;ZNF384:-0.926655158295;CREB1:-0.992362603486;NFIL3:-1.0083703822;TBX4,5:-1.0300566048;BPTF:-1.03609987284;HOXA9_MEIS1:-1.06100978981;ATF5_CREB3:-1.07822263128;FOXP3:-1.09625946764;FOXN1:-1.10660793184;ATF4:-1.13634898539;AHR_ARNT_ARNT2:-1.16089216394;HIF1A:-1.1708046916;FOXP1:-1.22972353527;HOX{A4,D4}:-1.24838324746;STAT1,3:-1.25266006764;MYBL2:-1.28688377727;RFX2..5_RFXANK_RFXAP:-1.35587201518;NKX3-1:-1.36426175634;DBP:-1.40940731027;PDX1:-1.4965760482;NKX6-1,2:-1.70404406949
|top_motifs=RXR{A,B,G}:1.88070414889;SOX{8,9,10}:1.48325306298;TLX1..3_NFIC{dimer}:1.28076373042;AR:1.21850874214;bHLH_family:1.13941020419;NFATC1..3:1.13176977334;IKZF1:0.907730964429;TP53:0.866932006866;HIC1:0.863941089482;TFAP2{A,C}:0.833466005924;XCPE1{core}:0.812295297335;ONECUT1,2:0.79993776284;LHX3,4:0.746875477811;TFAP4:0.742935678784;PAX1,9:0.697306727688;ZNF423:0.693964647828;HBP1_HMGB_SSRP1_UBTF:0.684413793112;ZNF148:0.66215895104;GTF2A1,2:0.656032326879;ARID5B:0.617362701134;GZF1:0.613953125979;FOX{I1,J2}:0.610409388246;ETS1,2:0.610088056029;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.578709238263;EBF1:0.575234219608;GATA6:0.570189032407;PAX6:0.566120782217;LEF1_TCF7_TCF7L1,2:0.554315737978;ZBTB6:0.553323408659;ESRRA:0.552973252968;NKX2-2,8:0.486280702217;PAX8:0.470855792796;HOX{A5,B5}:0.462201999625;UFEwm:0.438680241465;PAX5:0.437812520009;SOX17:0.431369573689;SP1:0.408104150089;TFAP2B:0.399076017299;REST:0.392949273912;SPIB:0.377370912266;NR3C1:0.363862357065;ELF1,2,4:0.357680558042;SPZ1:0.348940951831;MTE{core}:0.337736397081;SOX5:0.31420063976;STAT5{A,B}:0.292568698109;ADNP_IRX_SIX_ZHX:0.270354588957;BACH2:0.259557094548;NFE2:0.243338669753;NFE2L1:0.241312007779;POU3F1..4:0.239866764934;NR5A1,2:0.238794413576;PRDM1:0.230422548167;ALX1:0.218654499424;CRX:0.206267895496;HES1:0.198994318457;PPARG:0.196501574661;NANOG:0.190064085928;TEAD1:0.188926940142;TFDP1:0.172994829367;HAND1,2:0.16685404168;RREB1:0.159300058267;ZFP161:0.154348401466;SOX2:0.151946193238;TFCP2:0.149863520206;FOS_FOS{B,L1}_JUN{B,D}:0.148591932944;SMAD1..7,9:0.138761683965;GTF2I:0.12916371604;NKX3-2:0.110869844767;GATA4:0.109245842988;TLX2:0.107637608128;HNF4A_NR2F1,2:0.107218614752;IKZF2:0.084001847209;ZIC1..3:0.0799656513752;GCM1,2:0.07840410928;EN1,2:0.0644430518016;SRF:0.0631540951379;RORA:0.0513833849953;POU2F1..3:0.0261260807821;RXRA_VDR{dimer}:0.019317354226;NHLH1,2:-0.0040683184025;PATZ1:-0.0122659992161;KLF4:-0.0133980222562;GLI1..3:-0.025168915386;FOXL1:-0.0353492902385;SPI1:-0.0383266317824;MED-1{core}:-0.0418561188424;NFE2L2:-0.0537515653276;TBP:-0.0539231994193;ZNF238:-0.0628279059783;MTF1:-0.0743565604749;FOSL2:-0.0869304473916;ZNF143:-0.0908849856716;RBPJ:-0.0985467758926;HMGA1,2:-0.107752934443;EGR1..3:-0.114052591693;MAZ:-0.123110663156;FOXD3:-0.125309466393;NRF1:-0.154913870945;CDC5L:-0.164490011332;GFI1B:-0.167519926495;PITX1..3:-0.176183573347;GFI1:-0.192867427319;FOXA2:-0.198643671583;PBX1:-0.199413730349;STAT2,4,6:-0.202114858043;HNF1A:-0.210308881092;LMO2:-0.220358932428;MYOD1:-0.233639161274;FOXQ1:-0.23719901536;NFKB1_REL_RELA:-0.249978140055;MYB:-0.25028796435;E2F1..5:-0.256701711313;MZF1:-0.260768037022;EVI1:-0.263714858098;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.271220272934;FOXM1:-0.27145325671;HMX1:-0.295273564891;MEF2{A,B,C,D}:-0.329181689777;TAL1_TCF{3,4,12}:-0.330070846504;JUN:-0.364766834491;YY1:-0.370324833554;NANOG{mouse}:-0.378374591629;PRRX1,2:-0.388667891192;DMAP1_NCOR{1,2}_SMARC:-0.396019793319;ATF6:-0.411786013284;TEF:-0.413569602628;HLF:-0.419672752614;SNAI1..3:-0.420893850432;RUNX1..3:-0.420980279684;POU1F1:-0.428387584728;NFY{A,B,C}:-0.434853533345;MAFB:-0.436606037601;ESR1:-0.457635472913;RFX1:-0.482491100321;OCT4_SOX2{dimer}:-0.485838294244;IRF1,2:-0.508661814217;ATF2:-0.518883846339;PAX4:-0.535844412837;IRF7:-0.540686618305;NR1H4:-0.547211964487;FOX{D1,D2}:-0.567591555743;ZEB1:-0.584932268102;PAX2:-0.589149792006;CEBPA,B_DDIT3:-0.608930507085;FOX{F1,F2,J1}:-0.620487163888;PAX3,7:-0.648703784302;BREu{core}:-0.649889708858;TGIF1:-0.655285015756;SREBF1,2:-0.664066572709;HSF1,2:-0.675429901942;ALX4:-0.679324433524;CUX2:-0.712616987068;XBP1:-0.725097192238;ELK1,4_GABP{A,B1}:-0.728249944316;T:-0.746655621751;AIRE:-0.746911133019;EP300:-0.75494671599;NFIX:-0.761409430159;VSX1,2:-0.769142569524;NKX2-3_NKX2-5:-0.787974560189;ZBTB16:-0.798396432295;POU6F1:-0.802509368846;CDX1,2,4:-0.813729380899;NKX2-1,4:-0.819505360156;MYFfamily:-0.820686414945;NR6A1:-0.842910091575;TOPORS:-0.8654242038;FOXO1,3,4:-0.870548326254;POU5F1:-0.884121683392;HOX{A6,A7,B6,B7}:-0.913709432104;ZNF384:-0.926655158295;CREB1:-0.992362603486;NFIL3:-1.0083703822;TBX4,5:-1.0300566048;BPTF:-1.03609987284;HOXA9_MEIS1:-1.06100978981;ATF5_CREB3:-1.07822263128;FOXP3:-1.09625946764;FOXN1:-1.10660793184;ATF4:-1.13634898539;AHR_ARNT_ARNT2:-1.16089216394;HIF1A:-1.1708046916;FOXP1:-1.22972353527;HOX{A4,D4}:-1.24838324746;STAT1,3:-1.25266006764;MYBL2:-1.28688377727;RFX2..5_RFXANK_RFXAP:-1.35587201518;NKX3-1:-1.36426175634;DBP:-1.40940731027;PDX1:-1.4965760482;NKX6-1,2:-1.70404406949
|xref=
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11264-116G4;search_select_hide=table117:FF:11264-116G4
}}
}}

Latest revision as of 16:29, 3 June 2020

Name:Endothelial Cells - Artery, donor1
Species:Human (Homo sapiens)
Library ID:CNhs12496
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueartery
dev stage51 years old adult
sexfemale
age51
cell typeblood vessel endothelial cell
cell lineNA
companyCell Applications
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number1851
catalog numberCA300-R10a
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005974
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12496 CAGE DRX008220 DRR009092
Accession ID Hg19

Library idBAMCTSS
CNhs12496 DRZ000517 DRZ001902
Accession ID Hg38

Library idBAMCTSS
CNhs12496 DRZ011867 DRZ013252
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
sRNA-Seq  SAMD00005974
Library accession numbers

Library idMethodExp. accession idRun accession id
SRhi10004.TGACCA sRNA-Seq DRX037034 DRR041400
Accession ID Hg19

Library idBAMCTSS
SRhi10004.TGACCA DRZ007042


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.0318
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.0782
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen1.218
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.491
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural-0.012
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.306
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.228
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.112
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.123
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.203
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.124
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.265
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.938
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.428
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12496

Jaspar motifP-value
MA0002.20.45
MA0003.10.332
MA0004.10.93
MA0006.10.0444
MA0007.10.0379
MA0009.10.34
MA0014.10.816
MA0017.10.235
MA0018.24.9676e-5
MA0019.10.0332
MA0024.10.00311
MA0025.10.287
MA0027.10.931
MA0028.10.0514
MA0029.10.265
MA0030.10.506
MA0031.10.267
MA0035.20.00474
MA0038.10.429
MA0039.20.367
MA0040.10.279
MA0041.10.199
MA0042.10.593
MA0043.15.95052e-7
MA0046.10.622
MA0047.20.0275
MA0048.10.342
MA0050.10.034
MA0051.10.842
MA0052.10.195
MA0055.10.0379
MA0057.10.132
MA0058.10.868
MA0059.10.76
MA0060.10.37
MA0061.10.954
MA0062.20.0351
MA0065.20.585
MA0066.10.658
MA0067.10.0278
MA0068.10.8
MA0069.10.104
MA0070.10.702
MA0071.10.212
MA0072.10.568
MA0073.10.399
MA0074.10.26
MA0076.15.17806e-4
MA0077.13.23815e-6
MA0078.10.0562
MA0079.20.216
MA0080.20.0315
MA0081.10.434
MA0083.10.176
MA0084.10.643
MA0087.10.568
MA0088.10.686
MA0090.10.196
MA0091.10.401
MA0092.10.778
MA0093.10.961
MA0099.21.3098e-7
MA0100.10.0774
MA0101.10.762
MA0102.26.46064e-5
MA0103.10.673
MA0104.20.122
MA0105.10.9
MA0106.10.0244
MA0107.10.357
MA0108.20.259
MA0111.10.4
MA0112.20.9
MA0113.10.201
MA0114.10.355
MA0115.10.277
MA0116.10.508
MA0117.10.253
MA0119.10.0918
MA0122.10.263
MA0124.10.883
MA0125.10.643
MA0131.10.322
MA0135.10.309
MA0136.10.101
MA0137.20.0581
MA0138.20.936
MA0139.10.504
MA0140.10.0335
MA0141.10.0157
MA0142.10.326
MA0143.10.444
MA0144.10.555
MA0145.10.203
MA0146.10.498
MA0147.10.296
MA0148.10.0254
MA0149.10.0978
MA0150.10.451
MA0152.10.809
MA0153.10.102
MA0154.10.318
MA0155.10.0361
MA0156.10.13
MA0157.10.344
MA0159.10.402
MA0160.10.142
MA0162.10.0394
MA0163.10.541
MA0164.10.739
MA0258.10.961
MA0259.10.193



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12496

Novel motifP-value
10.902
100.204
1000.951
1010.112
1020.73
1030.58
1040.671
1050.898
1060.246
1070.0479
1080.303
1090.33
110.257
1100.0708
1110.74
1120.467
1130.372
1140.511
1150.698
1160.285
1170.772
1180.339
1190.777
120.573
1200.00172
1210.609
1220.681
1230.00461
1240.126
1250.915
1260.713
1270.439
1280.435
1290.398
130.886
1300.889
1310.532
1320.137
1330.905
1340.548
1350.305
1360.413
1370.106
1380.572
1390.562
140.914
1400.711
1410.915
1420.762
1430.105
1440.727
1450.197
1460.399
1470.0626
1480.442
1490.0124
150.964
1500.184
1510.804
1520.0194
1530.0626
1540.337
1550.564
1560.301
1570.871
1580.107
1590.843
160.471
1600.034
1610.273
1620.883
1630.725
1640.366
1650.121
1660.518
1670.132
1680.336
1690.0688
170.261
180.839
190.283
20.27
200.559
210.851
220.247
230.252
240.731
250.378
260.803
270.226
280.182
290.854
30.841
300.672
310.65
320.48
330.361
340.0755
350.444
360.248
370.299
380.183
390.508
40.969
400.00508
410.0806
420.913
430.795
440.774
450.234
460.496
470.588
480.138
490.734
50.878
500.744
510.616
520.698
530.325
540.525
550.714
560.76
570.561
580.191
590.0624
60.21
600.868
610.837
620.672
630.396
640.68
650.119
660.605
670.409
680.0552
690.23
70.972
700.677
710.689
720.102
730.00241
740.348
750.546
760.409
770.0382
780.815
790.0138
80.0276
800.237
810.597
820.744
830.415
840.465
850.819
860.655
870.111
880.8
890.145
90.327
900.117
910.363
920.507
930.841
940.965
950.0419
960.35
970.552
980.372
990.0135



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12496


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000076 (squamous epithelial cell)
0002139 (endothelial cell of vascular tree)
0000213 (lining cell)
0002078 (meso-epithelial cell)
0000215 (barrier cell)
0000255 (eukaryotic cell)
0000115 (endothelial cell)
0000071 (blood vessel endothelial cell)
1000413 (endothelial cell of artery)

UBERON: Anatomy
0000468 (multi-cellular organism)
0001637 (artery)
0000483 (epithelium)
0000479 (tissue)
0000055 (vessel)
0004111 (anatomical conduit)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0003914 (epithelial tube)
0000025 (tube)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0000490 (unilaminar epithelium)
0006914 (squamous epithelium)
0000487 (simple squamous epithelium)
0003509 (arterial blood vessel)
0004638 (blood vessel endothelium)
0003915 (endothelial tube)
0004700 (arterial system endothelium)
0007500 (epithelial tube open at both ends)
0001981 (blood vessel)
0002049 (vasculature)
0001986 (endothelium)
0010317 (germ layer / neural crest derived structure)
0007798 (vascular system)
0004852 (cardiovascular system endothelium)
0001917 (endothelium of artery)
0004535 (cardiovascular system)
0004572 (arterial system)
0004537 (blood vasculature)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000046 (human endothelial cell sample)
0000047 (human endothelial cell of the artery sample)
0000001 (sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0002546 (embryonic blood vessel endothelial progenitor cell)
CL:0000222 (mesodermal cell)

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