FF:11364-117I5: Difference between revisions

Latest revision as of 17:55, 4 June 2020

Name:	Smooth Muscle Cells - Internal Thoracic Artery, donor2
Species:	Human (Homo sapiens)
Library ID:	CNhs11988
Sample type:	primary cells
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	internal thoracic artery
dev stage	35 years old adult
sex	male
age	35
cell type	smooth muscle cell
cell line	NA
company	Cell Applications
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	1678
catalog number	CA358-R10a
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005745

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs11988		CAGE		DRX008492		DRR009364

Accession ID Hg19

Library id		BAM		CTSS
CNhs11988		DRZ000789		DRZ002174

Accession ID Hg38

Library id		BAM		CTSS
CNhs11988		DRZ012139		DRZ013524

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

RNA-Seq Accession numbers

Method		Sample accession id
sRNA-Seq		SAMD00005745

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
SRhi10013.GAGTGG		sRNA-Seq		DRX037224		DRR041590

Accession ID Hg19

Library id		BAM		CTSS
SRhi10013.GAGTGG		DRZ007232

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.0505
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.295
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.296
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.117
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.132
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.536
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.0552
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.184
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0.238
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.428
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.267
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.0139
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.333
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.125
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.172
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.47
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.346
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.467
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	1.128
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.47
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0.0788
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.391
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11988

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.247
MA0003.1	MA0003.1	0.34
MA0004.1	MA0004.1	0.0826
MA0006.1	MA0006.1	0.0567
MA0007.1	MA0007.1	0.342
MA0009.1	MA0009.1	0.51
MA0014.1	MA0014.1	0.415
MA0017.1	MA0017.1	0.784
MA0018.2	MA0018.2	4.72834e-7
MA0019.1	MA0019.1	0.821
MA0024.1	MA0024.1	5.85194e-8
MA0025.1	MA0025.1	0.0545
MA0027.1	MA0027.1	0.766
MA0028.1	MA0028.1	0.94
MA0029.1	MA0029.1	0.857
MA0030.1	MA0030.1	0.0215
MA0031.1	MA0031.1	0.0894
MA0035.2	MA0035.2	0.0348
MA0038.1	MA0038.1	6.83306e-4
MA0039.2	MA0039.2	0.0394
MA0040.1	MA0040.1	0.849
MA0041.1	MA0041.1	0.27
MA0042.1	MA0042.1	0.998
MA0043.1	MA0043.1	3.17679e-4
MA0046.1	MA0046.1	0.0551
MA0047.2	MA0047.2	0.329
MA0048.1	MA0048.1	0.404
MA0050.1	MA0050.1	3.30279e-31
MA0051.1	MA0051.1	5.81013e-28
MA0052.1	MA0052.1	6.1e-4
MA0055.1	MA0055.1	0.28
MA0057.1	MA0057.1	0.974
MA0058.1	MA0058.1	0.0495
MA0059.1	MA0059.1	0.943
MA0060.1	MA0060.1	4.26725e-17
MA0061.1	MA0061.1	0.0463
MA0062.2	MA0062.2	0.0221
MA0065.2	MA0065.2	0.33
MA0066.1	MA0066.1	0.33
MA0067.1	MA0067.1	0.00116
MA0068.1	MA0068.1	0.439
MA0069.1	MA0069.1	0.309
MA0070.1	MA0070.1	0.819
MA0071.1	MA0071.1	0.24
MA0072.1	MA0072.1	0.158
MA0073.1	MA0073.1	0.629
MA0074.1	MA0074.1	0.0842
MA0076.1	MA0076.1	0.51
MA0077.1	MA0077.1	0.623
MA0078.1	MA0078.1	0.511
MA0079.2	MA0079.2	0.644
MA0080.2	MA0080.2	2.10453e-4
MA0081.1	MA0081.1	0.102
MA0083.1	MA0083.1	0.552
MA0084.1	MA0084.1	0.22
MA0087.1	MA0087.1	0.843
MA0088.1	MA0088.1	0.632
MA0090.1	MA0090.1	0.0452
MA0091.1	MA0091.1	0.4
MA0092.1	MA0092.1	0.228
MA0093.1	MA0093.1	0.0744
MA0099.2	MA0099.2	0.883
MA0100.1	MA0100.1	0.0163
MA0101.1	MA0101.1	0.26
MA0102.2	MA0102.2	0.812
MA0103.1	MA0103.1	0.033
MA0104.2	MA0104.2	0.0675
MA0105.1	MA0105.1	0.0333
MA0106.1	MA0106.1	0.168
MA0107.1	MA0107.1	0.0724
MA0108.2	MA0108.2	0.247
MA0111.1	MA0111.1	0.199
MA0112.2	MA0112.2	0.0419
MA0113.1	MA0113.1	0.724
MA0114.1	MA0114.1	0.873
MA0115.1	MA0115.1	0.837
MA0116.1	MA0116.1	0.161
MA0117.1	MA0117.1	0.1
MA0119.1	MA0119.1	0.0563
MA0122.1	MA0122.1	0.863
MA0124.1	MA0124.1	0.13
MA0125.1	MA0125.1	0.11
MA0131.1	MA0131.1	0.224
MA0135.1	MA0135.1	0.112
MA0136.1	MA0136.1	3.97994e-4
MA0137.2	MA0137.2	0.0389
MA0138.2	MA0138.2	0.566
MA0139.1	MA0139.1	0.789
MA0140.1	MA0140.1	0.022
MA0141.1	MA0141.1	0.866
MA0142.1	MA0142.1	0.0807
MA0143.1	MA0143.1	0.749
MA0144.1	MA0144.1	0.0405
MA0145.1	MA0145.1	0.397
MA0146.1	MA0146.1	0.867
MA0147.1	MA0147.1	0.263
MA0148.1	MA0148.1	0.818
MA0149.1	MA0149.1	0.794
MA0150.1	MA0150.1	0.388
MA0152.1	MA0152.1	0.316
MA0153.1	MA0153.1	0.0995
MA0154.1	MA0154.1	0.242
MA0155.1	MA0155.1	0.215
MA0156.1	MA0156.1	0.0777
MA0157.1	MA0157.1	0.492
MA0159.1	MA0159.1	0.141
MA0160.1	MA0160.1	0.28
MA0162.1	MA0162.1	0.0395
MA0163.1	MA0163.1	2.21509e-4
MA0164.1	MA0164.1	0.445
MA0258.1	MA0258.1	0.34
MA0259.1	MA0259.1	0.136

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11988

Novel motif	Logo	P-value
1	1	0.867
10	10	0.427
100	100	0.926
101	101	0.504
102	102	0.881
103	103	0.244
104	104	0.668
105	105	0.0522
106	106	0.0388
107	107	0.103
108	108	0.617
109	109	0.467
11	11	0.473
110	110	0.323
111	111	0.856
112	112	0.3
113	113	0.0511
114	114	0.594
115	115	0.137
116	116	0.0595
117	117	0.261
118	118	0.621
119	119	0.901
12	12	0.363
120	120	0.119
121	121	0.999
122	122	0.143
123	123	0.362
124	124	0.332
125	125	0.183
126	126	0.885
127	127	0.941
128	128	0.112
129	129	0.75
13	13	0.825
130	130	0.628
131	131	0.529
132	132	0.435
133	133	0.684
134	134	0.846
135	135	0.568
136	136	0.728
137	137	0.988
138	138	0.759
139	139	0.349
14	14	0.319
140	140	0.933
141	141	0.441
142	142	0.806
143	143	0.631
144	144	0.621
145	145	0.902
146	146	0.576
147	147	0.00642
148	148	0.408
149	149	0.247
15	15	0.684
150	150	0.0604
151	151	0.446
152	152	0.0234
153	153	0.222
154	154	0.905
155	155	0.0403
156	156	0.793
157	157	0.444
158	158	0.0119
159	159	0.262
16	16	0.0311
160	160	0.644
161	161	0.985
162	162	0.703
163	163	0.692
164	164	0.00681
165	165	0.515
166	166	0.106
167	167	0.36
168	168	0.817
169	169	0.118
17	17	0.291
18	18	0.128
19	19	0.145
2	2	0.168
20	20	0.763
21	21	0.301
22	22	0.409
23	23	0.157
24	24	0.546
25	25	0.0947
26	26	0.767
27	27	0.65
28	28	0.277
29	29	0.097
3	3	0.17
30	30	0.702
31	31	0.738
32	32	9.69612e-7
33	33	0.533
34	34	0.965
35	35	0.774
36	36	0.276
37	37	0.0207
38	38	0.998
39	39	0.104
4	4	0.0348
40	40	0.163
41	41	0.718
42	42	0.92
43	43	0.318
44	44	0.213
45	45	0.779
46	46	0.664
47	47	0.989
48	48	0.86
49	49	0.255
5	5	0.957
50	50	0.472
51	51	0.805
52	52	0.993
53	53	0.271
54	54	0.751
55	55	0.0982
56	56	0.543
57	57	0.776
58	58	0.469
59	59	0.176
6	6	0.983
60	60	0.344
61	61	0.632
62	62	0.754
63	63	0.339
64	64	0.728
65	65	0.24
66	66	0.139
67	67	0.166
68	68	0.885
69	69	0.64
7	7	0.174
70	70	0.543
71	71	0.596
72	72	0.656
73	73	0.0118
74	74	0.287
75	75	0.221
76	76	0.315
77	77	0.00998
78	78	0.744
79	79	0.032
8	8	0.409
80	80	0.405
81	81	0.806
82	82	0.55
83	83	0.975
84	84	0.617
85	85	0.0958
86	86	0.346
87	87	0.00675
88	88	0.475
89	89	0.0112
9	9	0.382
90	90	0.713
91	91	0.76
92	92	0.259
93	93	0.836
94	94	0.803
95	95	0.155
96	96	0.476
97	97	0.428
98	98	0.859
99	99	0.00835

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11988

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000173 human smooth muscle cell of the internal thoracic artery sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002371 (somatic cell)
0000393 (electrically responsive cell)
0000183 (contractile cell)
0000187 (muscle cell)
0000192 (smooth muscle cell)
0000211 (electrically active cell)
0000255 (eukaryotic cell)
0000359 (vascular associated smooth muscle cell)
0002595 (smooth muscle cell of the subclavian artery)
0002593 (smooth muscle cell of the internal thoracic artery)

UBERON: Anatomy
0000468 (multi-cellular organism)
0001637 (artery)
0002100 (trunk)
0000483 (epithelium)
0000479 (tissue)
0000055 (vessel)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0003914 (epithelial tube)
0000025 (tube)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0009569 (subdivision of trunk)
0004573 (systemic artery)
0003834 (thoracic segment blood vessel)
0003509 (arterial blood vessel)
0007500 (epithelial tube open at both ends)
0001981 (blood vessel)
0002049 (vasculature)
0003513 (trunk blood vessel)
0010317 (germ layer / neural crest derived structure)
0007798 (vascular system)
0002456 (internal thoracic artery)
0001533 (subclavian artery)
0004535 (cardiovascular system)
0004571 (systemic arterial system)
0000915 (thoracic segment of trunk)
0004572 (arterial system)
0004537 (blood vasculature)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000167 (smooth muscle cell sample)
0000173 (human smooth muscle cell of the internal thoracic artery sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000355 (multi-potent skeletal muscle stem cell)
CL:0000222 (mesodermal cell)
CL:0000514 (smooth muscle myoblast)

@@ Line 1: / Line 1: @@
 {{f5samples
+|DRA_sample_Accession=CAGE@SAMD00005745
+|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005745
+|accession_numbers=CAGE;DRX008492;DRR009364;DRZ000789;DRZ002174;DRZ012139;DRZ013524
+|accession_numbers_RNASeq=sRNA-Seq;DRX037224;DRR041590;DRZ007232
 |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0001637,UBERON:0002100,UBERON:0000483,UBERON:0000479,UBERON:0000055,UBERON:0004111,UBERON:0000475,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0003914,UBERON:0000025,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0009569,UBERON:0004573,UBERON:0003834,UBERON:0003509,UBERON:0007500,UBERON:0001981,UBERON:0002049,UBERON:0003513,UBERON:0010317,UBERON:0007798,UBERON:0002456,UBERON:0001533,UBERON:0004535,UBERON:0004571,UBERON:0000915,UBERON:0004572,UBERON:0004537,UBERON:0001009
 |ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002371,CL:0000393,CL:0000183,CL:0000187,CL:0000192,CL:0000211,CL:0000255,CL:0000359,CL:0002595,CL:0002593
@@ Line 7: / Line 11: @@
 |created_by=
 |creation_date=
-|datafreeze_phase=1
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr8:55370487..55370503,+!p1@SOX17!1.92!83.11!SOX17;;chr21:38071430..38071456,+!p1@SIM2!1.82!65.80!SIM2;;chr11:64764435..64764449,-!p1@BATF2!1.73!72.14!BATF2;;chr10:94449703..94449718,+!p1@HHEX!1.68!172.31!HHEX;;chr6:126240380..126240430,+!p2@NCOA7!1.60!98.22!NCOA7;;chr11:34642612..34642646,+!p1@EHF!1.59!37.53!EHF;;chr7:27183263..27183284,-!p2@HOXA5!1.47!28.51!HOXA5;;chr11:65686802..65686818,+!p6@DRAP1!1.46!48.01!DRAP1;;chr20:6748325..6748352,+!p1@BMP2!1.44!38.02!BMP2;;chr7:27183291..27183324,-!p1@HOXA5!1.43!25.83!HOXA5;;chr11:615570..615721,-!p2@IRF7!1.33!39.48!IRF7;;chr1:170632285..170632309,+!p1@PRRX1!1.28!20.47!PRRX1;;chr11:65667884..65667895,-!p2@FOSL1!1.27!67.51!FOSL1;;chr21:38071403..38071428,+!p2@SIM2!1.26!17.06!SIM2;;chr6:126240356..126240379,+!p7@NCOA7!1.24!20.23!NCOA7;;chr9:132427972..132428056,+!p1@PRRX2!1.23!20.72!PRRX2;;chr7:27170359..27170381,-!p1@HOXA4!1.23!15.84!HOXA4;;chr11:46299199..46299233,+!p1@CREB3L1!1.21!77.74!CREB3L1;;chr2:102091144..102091183,-!p2@RFX8!1.21!15.11!RFX8;;chr11:65686732..65686756,+!p2@DRAP1!1.20!62.39!DRAP1;;chr16:86544113..86544145,+!p1@FOXF1!1.20!18.28!FOXF1;;chr15:67458491..67458505,+!p18@SMAD3!1.19!14.62!SMAD3;;chr9:132427883..132427951,+!p2@PRRX2!1.19!14.38!PRRX2;;chr17:1959369..1959388,+!p2@HIC1!1.18!37.29!HIC1;;chr18:19749386..19749404,+!p2@GATA6!1.18!19.98!GATA6;;chr10:94449675..94449694,+!p2@HHEX!1.17!37.29!HHEX;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.17!13.65!HOXC5;;chr11:46299539..46299620,+!p2@CREB3L1!1.16!22.91!CREB3L1;;chr19:42636586..42636607,-!p1@POU2F2!1.15!36.31!POU2F2;;chr2:231084639..231084654,-!p2@SP110!1.14!21.45!SP110;;chr3:25470156..25470227,+!p2@RARB!1.14!12.92!RARB;;chr11:65687222..65687240,+!p7@DRAP1!1.13!15.84!DRAP1;;chr12:54402745..54402788,+!p1@HOXC8!1.13!12.43!HOXC8;;chr18:19749541..19749557,+!p1@GATA6!1.12!38.26!GATA6;;chr15:83953397..83953425,-!p1@BNC1!1.12!14.14!BNC1;;chr6:36355513..36355578,-!p2@ETV7!1.11!15.11!ETV7;;chr11:615942..615957,-!p1@IRF7!1.10!108.94!IRF7;;chr1:170632115..170632136,+!p9@PRRX1!1.10!11.45!PRRX1;;chr7:26191809..26191890,+!p1@NFE2L3!1.08!55.57!NFE2L3;;chr2:191878812..191878823,-!p2@STAT1!1.07!13.89!STAT1;;chr12:54393880..54393962,+!p1@HOXC9!1.07!10.72!HOXC9;;chr1:158979872..158979898,+!p3@IFI16!1.06!32.66!IFI16;;chr17:46622070..46622109,-!p1@HOXB2!1.04!22.67!HOXB2;;chr11:65687362..65687436,+!p3@DRAP1!1.03!44.60!DRAP1;;chr7:27183114..27183138,-!p3@HOXA5!1.03!9.75!HOXA5;;chr12:66218598..66218645,+!p2@HMGA2!1.01!43.62!HMGA2;;chr19:13134772..13134822,+!p2@NFIX!1.01!13.89!NFIX;;chr1:170633348..170633399,+!p2@PRRX1!1.01!12.67!PRRX1;;chr7:27153454..27153469,-!p2@HOXA3!1.00!9.02!HOXA3;;chr17:46688334..46688385,-!p1@HOXB7!0.99!12.67!HOXB7;;chr6:126240442..126240459,+!p4@NCOA7!0.99!11.21!NCOA7;;chr8:106330656..106330684,+!p1@ZFPM2!0.98!22.67!ZFPM2;;chr5:2751762..2751784,-!p1@IRX2!0.98!8.53!IRX2;;chr6:34204921..34204939,+!p3@HMGA1!0.97!257.36!HMGA1;;chr11:65687243..65687276,+!p8@DRAP1!0.97!11.45!DRAP1;;chr7:44143925..44143970,+!p1@AEBP1!0.96!186.93!AEBP1;;chr12:54447599..54447630,+!p3@HOXC4!0.96!9.99!HOXC4;;chr12:54447637..54447659,+!p4@HOXC4!0.96!8.04!HOXC4;;chr7:44143978..44143989,+!p2@AEBP1!0.95!14.87!AEBP1;;chr16:86600426..86600441,+!p1@FOXC2!0.94!19.50!FOXC2;;chr1:170633262..170633285,+!p3@PRRX1!0.94!8.77!PRRX1;;chrY:2803415..2803468,+!p1@ZFY!0.94!7.80!ZFY;;chr1:158979792..158979814,+!p2@IFI16!0.93!74.58!IFI16;;chr8:25902876..25902936,-!p1@EBF2!0.93!7.56!EBF2;;chr8:72756667..72756736,-!p2@MSC!0.92!11.70!MSC;;chr1:170632137..170632172,+!p10@PRRX1!0.92!7.31!PRRX1;;chr2:102091566..102091581,-!p1@RFX8!0.92!7.31!RFX8;;chr1:37940170..37940190,+!p1@ZC3H12A!0.91!91.39!ZC3H12A;;chr12:66218836..66218888,+!p1@HMGA2!0.91!69.46!HMGA2;;chr11:65687158..65687216,+!p4@DRAP1!0.91!42.89!DRAP1;;chr17:46622114..46622138,-!p4@HOXB2!0.91!11.21!HOXB2;;chr17:46682321..46682362,-!p1@HOXB6!0.91!7.07!HOXB6;;chr22:19748231..19748317,+!p1@TBX1!0.91!7.07!TBX1;;chr2:191878874..191878938,-!p1@STAT1!0.90!388.72!STAT1;;chr17:46621937..46621966,-!p2@HOXB2!0.89!19.25!HOXB2;;chr2:231280954..231280965,+!p2@SP100!0.89!12.92!SP100;;chr11:34642656..34642667,+!p2@EHF!0.89!6.82!EHF;;chr9:16705069..16705086,-!p3@BNC2!0.89!6.82!BNC2;;chr3:141121847..141121868,+!p5@ZBTB38!0.88!10.24!ZBTB38;;chr12:54394309..54394336,+!p2@HOXC9!0.88!6.58!HOXC9;;chr11:65667846..65667868,-!p1@FOSL1!0.87!178.89!FOSL1;;chr14:62162258..62162269,+!p2@HIF1A!0.87!65.80!HIF1A;;chr11:64764402..64764413,-!p2@BATF2!0.87!6.34!BATF2;;chr21:38071462..38071474,+!p3@SIM2!0.87!6.34!SIM2;;chr12:27485762..27485776,+!p3@ARNTL2!0.86!17.55!ARNTL2;;chr7:19157043..19157088,-!p2@TWIST1!0.86!16.33!TWIST1;;chr2:239756739..239756755,+!p2@TWIST2!0.86!10.97!TWIST2;;chr12:66218255..66218304,+!p3@HMGA2!0.85!17.06!HMGA2;;chr10:35484053..35484076,+!p1@CREM!0.85!15.84!CREM;;chr6:85473156..85473210,-!p2@TBX18!0.85!7.56!TBX18;;chr7:27183191..27183214,-!p4@HOXA5!0.85!6.09!HOXA5;;chr3:25470062..25470084,+!p4@RARB!0.85!6.09!RARB;;chr14:62162285..62162296,+!p3@HIF1A!0.84!32.66!HIF1A;;chr6:36355431..36355466,-!p1@ETV7!0.84!5.85!ETV7;;chr4:174450089..174450153,-!p2@HAND2!0.84!5.85!HAND2;;chr9:35732647..35732678,+!p2@CREB3!0.83!34.12!CREB3;;chr12:53614115..53614154,-!p1@RARG!0.83!32.90!RARG;;chr17:1958388..1958404,+!p1@HIC1!0.82!38.02!HIC1;;chr2:239756671..239756732,+!p1@TWIST2!0.82!19.25!TWIST2;;chrY:21906594..21906622,-!p1@KDM5D!0.82!5.61!KDM5D;;chr10:22292591..22292606,-!p2@DNAJC1!0.81!9.26!DNAJC1;;chr22:38598057..38598071,+!p3@MAFF!0.80!13.16!MAFF;;chr17:46687959..46688007,-!p2@HOXB7!0.80!7.56!HOXB7;;chr15:67458861..67458879,+!p17@SMAD3!0.80!5.36!SMAD3;;chr3:168864315..168864339,-!p2@MECOM!0.79!8.77!MECOM;;chr7:27192185..27192209,-!p1@HOXA3!0.79!5.12!HOXA3;;chr2:19558373..19558392,-!p1@OSR1!0.78!14.87!OSR1;;chr11:65686776..65686787,+!p9@DRAP1!0.77!5.85!DRAP1;;chr1:170632723..170632739,+!p8@PRRX1!0.77!4.87!PRRX1;;chr12:56753869..56753930,-!p1@STAT2!0.76!230.07!STAT2;;chr3:141087393..141087426,+!p3@ZBTB38!0.76!20.47!ZBTB38;;chr8:72756267..72756296,-!p4@MSC!0.76!7.31!MSC;;chr2:66662895..66662907,+!p3@MEIS1!0.76!6.09!MEIS1;;chr7:139762641..139762768,-!p1@PARP12!0.75!69.95!PARP12;;chr22:38598086..38598105,+!p1@MAFF!0.75!54.35!MAFF;;chr2:45236540..45236577,-!p1@SIX2!0.75!4.63!SIX2;;chr19:46801639..46801699,+!p1@HIF3A!0.75!4.63!HIF3A;;chr7:27196267..27196311,-!p1@HOXA7!0.75!4.63!HOXA7;;chr18:19749517..19749531,+!p3@GATA6!0.74!8.53!GATA6;;chr15:57511609..57511651,+!p2@TCF12!0.74!8.04!TCF12;;chr14:24630902..24630948,+!p2@IRF9!0.74!5.61!IRF9;;chr17:46622205..46622218,-!p3@HOXB2!0.74!5.36!HOXB2;;chr2:231084659..231084721,-!p1@SP110!0.73!113.81!SP110;;chr17:38256822..38256851,-!p1@NR1D1!0.73!38.26!NR1D1;;chr14:61116183..61116208,-!p1@SIX1!0.73!18.28!SIX1;;chr8:72756637..72756664,-!p3@MSC!0.73!5.12!MSC;;chr6:36355486..36355497,-!p3@ETV7!0.73!4.39!ETV7;;chr2:145275162..145275202,-!p2@ZEB2!0.72!28.03!ZEB2;;chr11:65430554..65430579,-!p3@RELA!0.72!11.94!RELA;;chr20:50721803..50721857,-!p2@ZFP64!0.72!7.07!ZFP64;;chr8:106330696..106330719,+!p2@ZFPM2!0.72!5.61!ZFPM2;;chr9:4300050..4300118,-!p1@GLIS3!0.71!29.98!GLIS3;;chr4:81118647..81118666,+!p1@PRDM8!0.71!5.61!PRDM8;;chr1:170632959..170632987,+!p4@PRRX1!0.71!4.63!PRRX1;;chr11:46299443..46299459,+!p4@CREB3L1!0.71!4.14!CREB3L1;;chr12:66218923..66218934,+!p14@HMGA2!0.71!4.14!HMGA2;;chr5:131826457..131826514,-!p1@IRF1!0.70!178.40!IRF1;;chr12:124873357..124873401,-!p1@NCOR2!0.70!52.89!NCOR2;;chr17:59477233..59477263,+!p1@TBX2!0.70!13.89!TBX2;;chr1:158979851..158979865,+!p5@IFI16!0.70!9.75!IFI16;;chr6:106534192..106534224,+!p1@PRDM1!0.69!12.19!PRDM1;;chr2:28618532..28618610,+!p4@FOSL2!0.69!7.07!FOSL2;;chr2:46612334..46612349,+!p6@EPAS1!0.69!5.36!EPAS1;;chr7:44143997..44144008,+!p3@AEBP1!0.69!5.12!AEBP1;;chr7:1577899..1577943,+!p3@MAFK!0.69!3.90!MAFK;;chr7:27169801..27169844,-!p2@HOXA4!0.69!3.90!HOXA4;;chr7:27205106..27205134,-!p2@HOXA9!0.69!3.90!HOXA9;;chr1:170632051..170632081,+!p16@PRRX1!0.69!3.90!PRRX1;;chr1:170632477..170632506,+!p6@PRRX1!0.69!3.90!PRRX1;;chr1:201979703..201979721,+!p2@ELF3!0.69!3.90!ELF3;;chr20:47894569..47894799,-!p1@ZNFX1!0.68!116.74!ZNFX1;;chr19:52074502..52074587,+!p1@ZNF175!0.68!15.60!ZNF175;;chr15:37390850..37390909,-!p3@MEIS2!0.67!7.80!MEIS2;;chr2:200322654..200322707,-!p2@SATB2!0.67!5.61!SATB2;;chr2:66662510..66662521,+!p6@MEIS1!0.67!3.66!MEIS1;;chr11:65429891..65429915,-!p7@RELA!0.67!3.66!RELA;;chr11:65668011..65668020,-!p3@FOSL1!0.67!3.66!FOSL1;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.67!3.66!HOXC5;;chr8:71157595..71157616,-!p13@NCOA2!0.67!3.66!NCOA2;;chr8:77593750..77593757,+!p3@ZFHX4!0.67!3.66!ZFHX4;;chr2:66662281..66662308,+!p1@MEIS1!0.66!14.14!MEIS1;;chr7:19157248..19157268,-!p1@TWIST1!0.66!11.21!TWIST1;;chr10:104155659..104155676,+!p4@NFKB2!0.66!4.63!NFKB2;;chr1:151032860..151032918,+!p1@MLLT11!0.65!48.74!MLLT11;;chr19:13136130..13136165,+!p6@NFIX!0.65!4.87!NFIX;;chr2:231077626..231077651,-!p6@SP110!0.65!4.63!SP110;;chr9:14083467..14083483,-!p4@NFIB!0.64!9.26!NFIB;;chr17:46622440..46622477,-!p5@HOXB2!0.64!3.90!HOXB2;;chr18:53068911..53068935,-!p4@TCF4!0.64!3.90!TCF4;;chr17:46659728..46659749,-!p3@HOXB3!0.64!3.41!HOXB3;;chr7:27183325..27183338,-!p5@HOXA5!0.64!3.41!HOXA5;;chr19:9609272..9609297,-!p1@ZNF560!0.64!3.41!ZNF560;;chr1:170632439..170632465,+!p11@PRRX1!0.64!3.41!PRRX1;;chr2:113994526..113994556,-!p3@PAX8!0.64!3.41!PAX8;;chr10:131762504..131762555,-!p1@EBF3!0.64!3.41!EBF3;;chr12:54402790..54402805,+!p2@HOXC8!0.64!3.41!HOXC8;;chr12:54422217..54422239,+!p3@HOXC6!0.64!3.41!HOXC6;;chr19:50169013..50169062,-!p2@IRF3!0.63!22.18!IRF3;;chr1:935467..935484,-!p1@HES4!0.63!16.57!HES4;;chr2:231084820..231084836,-!p5@SP110!0.63!3.90!SP110;;chr5:139492456..139492489,+!p7@PURA!0.62!3.17!PURA;;chr7:27153428..27153440,-!p3@HOXA3!0.62!3.17!HOXA3;;chr7:27205136..27205164,-!p1@HOXA9!0.62!3.17!HOXA9;;chr7:27224842..27224872,-!p1@HOXA11!0.62!3.17!HOXA11;;chr15:67458836..67458859,+!p22@SMAD3!0.62!3.17!SMAD3;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!0.62!3.17!SEBOX;;chr1:170632028..170632043,+!p20@PRRX1!0.62!3.17!PRR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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000056;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000187;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000192;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000359;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002593;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001637;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001981;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002385;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003513;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0004573;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0007798
 |ffid_belonging_in_development=CL:0000355,CL:0000222,CL:0000514
 |fonse_cell_line=
@@ Line 38: / Line 44: @@
 |fonse_treatment_closure=
 |has_quality=
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Smooth%2520Muscle%2520Cells%2520-%2520Internal%2520Thoracic%2520Artery%252c%2520donor2.CNhs11988.11364-117I5.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Smooth%2520Muscle%2520Cells%2520-%2520Internal%2520Thoracic%2520Artery%252c%2520donor2.CNhs11988.11364-117I5.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Smooth%2520Muscle%2520Cells%2520-%2520Internal%2520Thoracic%2520Artery%252c%2520donor2.CNhs11988.11364-117I5.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Smooth%2520Muscle%2520Cells%2520-%2520Internal%2520Thoracic%2520Artery%252c%2520donor2.CNhs11988.11364-117I5.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Smooth%2520Muscle%2520Cells%2520-%2520Internal%2520Thoracic%2520Artery%252c%2520donor2.CNhs11988.11364-117I5.hg38.nobarcode.ctss.bed.gz
 |id=FF:11364-117I5
 |is_a=EFO:0002091;;FF:0000173
 |is_obsolete=
+|library_id=CNhs11988
+|library_id_phase_based=2:CNhs11988
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11364
+|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10013.GAGTGG.11364
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11364
+|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10013.GAGTGG.11364
 |name=Smooth Muscle Cells - Internal Thoracic Artery, donor2
 |namespace=FANTOM5
@@ Line 46: / Line 65: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs11988,LSID836,release011,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=SRhi10013,,,
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 |rna_box=117
@@ Line 61: / Line 82: @@
 |rna_tube_id=117I5
 |rna_weight_ug=10
+|rnaseq_library_id=SRhi10013.GAGTGG
 |sample_age=35
+|sample_category=primary cells
 |sample_cell_catalog=N/A
 |sample_cell_line=
@@ Line 83: / Line 106: @@
 |top_motifs=GZF1:2.35306595016;EN1,2:2.34312839726;IRF7:2.30373277136;IRF1,2:2.10821354661;NKX2-2,8:1.80786794496;ALX4:1.67991179311;HMGA1,2:1.43033277086;EVI1:1.39940124069;HSF1,2:1.38768911952;UFEwm:1.29768336902;MYBL2:1.27407670583;NKX3-1:1.27068716846;KLF4:1.24646560341;HIF1A:1.23098289347;RXR{A,B,G}:1.19916504431;ONECUT1,2:1.17792611497;TAL1_TCF{3,4,12}:1.14934349306;IKZF1:1.14110789513;XBP1:1.08852892805;TLX1..3_NFIC{dimer}:1.08287710797;POU6F1:1.05918545183;GLI1..3:1.02603276086;EBF1:0.955736708039;PPARG:0.932272879157;CDC5L:0.904700282738;FOXL1:0.872550395257;STAT2,4,6:0.851602714396;GTF2A1,2:0.845028602562;NR1H4:0.842674187001;FOXD3:0.840255615553;ATF6:0.795757469703;ZBTB6:0.79066611446;GCM1,2:0.779316598528;TFAP4:0.766646715672;ZIC1..3:0.748181207826;ZNF238:0.727815909763;NKX3-2:0.723033162897;HOX{A5,B5}:0.711094152575;NFE2L1:0.708150025509;HES1:0.670455192985;NFATC1..3:0.669199993302;XCPE1{core}:0.665043908785;TFCP2:0.661195441193;HOX{A6,A7,B6,B7}:0.651545943089;TP53:0.651503420785;GFI1B:0.639762993704;PRDM1:0.639297843007;TBP:0.599710792907;NFIX:0.58635110148;SPZ1:0.573735100892;TEF:0.571710951533;MZF1:0.57079625113;TEAD1:0.544340234312;HOX{A4,D4}:0.516395622033;TOPORS:0.515241645557;ALX1:0.472852538682;HBP1_HMGB_SSRP1_UBTF:0.466077246026;HMX1:0.450565374375;PAX3,7:0.421316781692;PATZ1:0.418785166435;AIRE:0.410676890855;GATA4:0.400902476023;ADNP_IRX_SIX_ZHX:0.400614230476;SRF:0.377228127002;PAX1,9:0.372788768808;TFAP2B:0.367223314398;MTE{core}:0.35231617862;FOX{I1,J2}:0.346148137573;ZNF384:0.341559179864;HAND1,2:0.341339973526;ESR1:0.338827147979;MAFB:0.337121299071;FOXO1,3,4:0.324773880878;GTF2I:0.320867220792;HLF:0.313724989474;MYFfamily:0.312686923845;MTF1:0.309884207331;NR6A1:0.294188319162;NFKB1_REL_RELA:0.292301952497;CRX:0.289594413789;ESRRA:0.28398801496;POU3F1..4:0.256115602537;HIC1:0.244746478961;NR3C1:0.218162031729;ELK1,4_GABP{A,B1}:0.179913859416;SMAD1..7,9:0.156337797528;CDX1,2,4:0.155406366342;REST:0.15372785716;TLX2:0.152584031237;MAZ:0.150015994571;NFE2L2:0.142263049914;LHX3,4:0.117792508337;FOXQ1:0.110550041033;BACH2:0.101387370682;NHLH1,2:0.0952787089869;FOS_FOS{B,L1}_JUN{B,D}:0.0943398502096;FOXM1:0.0774331365115;ZNF423:0.0767094178033;PAX5:0.0713983194083;TFAP2{A,C}:0.060636087541;CEBPA,B_DDIT3:0.0377479030289;ZNF148:0.0369368002201;RXRA_VDR{dimer}:0.0189939925048;AR:0.0188996283835;HNF1A:0.0174165389182;PRRX1,2:0.0102655506425;NANOG{mouse}:0.0056534699832;ZBTB16:-0.0120556904683;DMAP1_NCOR{1,2}_SMARC:-0.031159737125;RREB1:-0.0353693845785;NFIL3:-0.046959333058;ELF1,2,4:-0.0527089466565;LMO2:-0.0541995912553;POU5F1:-0.063161664269;MED-1{core}:-0.110083322442;bHLH_family:-0.114009756945;HOXA9_MEIS1:-0.125615410958;ARID5B:-0.145850942363;POU2F1..3:-0.148206747925;SPI1:-0.150750359925;IKZF2:-0.160217872196;HNF4A_NR2F1,2:-0.174370797831;FOSL2:-0.181901452576;AHR_ARNT_ARNT2:-0.189689004841;RUNX1..3:-0.209653046332;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.22190142718;YY1:-0.242581251599;ETS1,2:-0.242996517378;ZFP161:-0.266762167079;FOXP3:-0.276149211345;JUN:-0.284592813415;BPTF:-0.287250675414;SP1:-0.301255698582;NRF1:-0.310726443906;PAX2:-0.325145307237;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.334303281105;SPIB:-0.354548689134;NFE2:-0.360861106725;SOX17:-0.38326200169;FOXP1:-0.387845365444;POU1F1:-0.400685100916;LEF1_TCF7_TCF7L1,2:-0.408769461592;ZNF143:-0.438251946015;DBP:-0.444029944128;EGR1..3:-0.452800030419;PAX8:-0.509271354006;CREB1:-0.528050509341;TBX4,5:-0.529554960677;TGIF1:-0.530241133085;VSX1,2:-0.532048826206;MYB:-0.544189136516;RFX1:-0.593332823259;ATF5_CREB3:-0.598461554053;FOX{D1,D2}:-0.599853595417;PITX1..3:-0.633760039051;SREBF1,2:-0.642945694425;SOX{8,9,10}:-0.684596438128;MEF2{A,B,C,D}:-0.727427157468;PBX1:-0.728077436955;RBPJ:-0.730132334037;NR5A1,2:-0.733855663687;STAT1,3:-0.754159123207;SNAI1..3:-0.785187972342;E2F1..5:-0.787865117775;GFI1:-0.803997636667;ZEB1:-0.838806710611;SOX2:-0.85008176415;EP300:-0.852687973562;T:-0.882680501444;PAX4:-0.898595411485;FOXN1:-0.899202377885;ATF4:-0.908552190034;SOX5:-0.911629179759;BREu{core}:-0.969576615603;CUX2:-0.972551207789;ATF2:-0.984311556037;GATA6:-1.0074512504;MYOD1:-1.03451439012;TFDP1:-1.04165929379;NKX2-3_NKX2-5:-1.06808103109;RFX2..5_RFXANK_RFXAP:-1.11705441527;NKX2-1,4:-1.15265116926;PAX6:-1.25725571884;FOX{F1,F2,J1}:-1.25906897161;STAT5{A,B}:-1.2791540287;NKX6-1,2:-1.31993051875;NFY{A,B,C}:-1.38276942224;PDX1:-1.38771500039;OCT4_SOX2{dimer}:-1.43012253879;RORA:-1.45767015342;NANOG:-1.56673351808;FOXA2:-1.78444782583
 |xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11364-117I5;search_select_hide=table117:FF:11364-117I5
 }}

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FF:11364-117I5: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 17:55, 4 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0