FF:11487-119E2: Difference between revisions
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{{f5samples | {{f5samples | ||
| | |DRA_sample_Accession=CAGE@SAMD00004941 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003 | |DRA_sample_Accession_RNASeq=RNA-Seq@SAMD00004941!sRNA-Seq@SAMD00004941 | ||
|HumanCAGEScanFiles=NCig10052;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.primary_cell.CAGEScan/Mast%2520cell%2520-%2520stimulated%252c%2520donor1.NCig10052.11487-119E2.hg19.GCTATA.3prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.primary_cell.CAGEScan/Mast%2520cell%2520-%2520stimulated%252c%2520donor1.NCig10052.11487-119E2.hg19.GCTATA.5prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.primary_cell.CAGEScan/Mast%2520cell%2520-%2520stimulated%252c%2520donor1.NCig10052.11487-119E2.hg19.GCTATA.bam;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.primary_cell.CAGEScan/Mast%2520cell%2520-%2520stimulated%252c%2520donor1.NCig10052.11487-119E2.hg19.GCTATA.pairs.bed.gz | |||
|accession_numbers=CAGE;DRX008330;DRR009202;DRZ000627;DRZ002012;DRZ011977;DRZ013362 | |||
|accession_numbers_RNASeq=RNA-Seq;DRX057150;DRR062909;DRZ007985!sRNA-Seq;DRX037112;DRR041478;DRZ007120 | |||
|ancestors_in_anatomy_facet= | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0000151,CL:0002371,CL:0000766,CL:0002274,CL:0000219,CL:0000163,CL:0000457,CL:0000738,CL:0000255,CL:0000097 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000260,FF:0000262 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr9:102584159..102584174,+!p2@NR4A3!2.97!1641.06!NR4A3;;chr8:22550982..22550999,-!p1@EGR3!2.93!2275.12!EGR3;;chr2:68592406..68592424,+!p1@PLEK!2.90!796.64!PLEK;;chr2:157189180..157189290,-!p1@NR4A2!2.67!2311.08!NR4A2;;chr13:72441315..72441454,-!p1@DACH1!2.54!670.02!DACH1;;chr10:38299412..38299430,+!p2@ZNF33A!2.51!320.23!ZNF33A;;chr9:102584128..102584144,+!p3@NR4A3!2.45!518.28!NR4A3;;chr10:64576105..64576133,-!p1@EGR2!2.44!548.83!EGR2;;chr9:102584329..102584341,+!p6@NR4A3!2.37!232.04!NR4A3;;chr10:35484053..35484076,+!p1@CREM!2.36!542.91!CREM;;chr9:102584262..102584276,+!p1@NR4A3!2.35!480.35!NR4A3;;chr6:135502501..135502546,+!p1@MYB!2.35!267.52!MYB;;chr19:36389729..36389751,-!p3@NFKBID!2.33!214.31!NFKBID;;chr17:38020557..38020572,-!p4@IKZF3!2.27!183.27!IKZF3;;chr1:158985493..158985535,+!p4@IFI16!2.26!271.46!IFI16;;chr13:41635029..41635044,-!p4@ELF1!2.24!354.72!ELF1;;chr10:35484090..35484104,+!p6@CREM!2.24!172.92!CREM;;chr14:103059455..103059488,+!p5@RCOR1!2.21!161.10!RCOR1;;chr3:71179699..71179744,-!p2@FOXP1!2.15!987.79!FOXP1;;chrX:48644984..48645005,+!p1@GATA1!2.14!135.98!GATA1;;chr7:137620650..137620677,-!p3@CREB3L2!2.11!126.61!CREB3L2;;chr2:145277640..145277771,-!p1@ZEB2!2.10!1578.00!ZEB2;;chr6:135502408..135502459,+!p2@MYB!2.10!145.34!MYB;;chr3:128212033..128212051,-!p1@GATA2!2.10!124.15!GATA2;;chr7:137620684..137620711,-!p4@CREB3L2!2.07!116.76!CREB3L2;;chr6:15246200..15246214,+!p2@JARID2!2.04!289.69!JARID2;;chr4:144435112..144435176,+!p3@SMARCA5!1.99!195.59!SMARCA5;;chr22:29196433..29196445,-!p4@XBP1!1.99!106.42!XBP1;;chr3:69788576..69788648,+!p1@MITF!1.97!461.13!MITF;;chr21:36421535..36421610,-!p2@RUNX1!1.94!295.11!RUNX1;;chr16:69600209..69600234,+!p4@NFAT5!1.93!105.43!NFAT5;;chr4:106068026..106068084,+!p1@TET2!1.91!672.49!TET2;;chr8:22550825..22550844,-!p7@EGR3!1.90!77.84!EGR3;;chr8:80679993..80680011,-!p1@HEY1!1.88!105.92!HEY1;;chr18:77155922..77155939,+!p1@NFATC1!1.87!193.12!NFATC1;;chr9:102584241..102584261,+!p4@NR4A3!1.87!110.85!NR4A3;;chr8:22550530..22550609,-!p2@EGR3!1.84!68.48!EGR3;;chr16:67063211..67063240,+!p2@CBFB!1.81!290.18!CBFB;;chr8:128747846..128747860,+!p15@MYC!1.81!63.06!MYC;;chr9:102584278..102584285,+!p5@NR4A3!1.75!55.67!NR4A3;;chr20:46130846..46130869,+!p5@NCOA3!1.74!58.63!NCOA3;;chr3:5021268..5021282,+!p4@BHLHE40!1.71!99.52!BHLHE40;;chr10:64576035..64576046,-!p2@EGR2!1.71!49.76!EGR2;;chr12:52445218..52445237,+!p1@NR4A1!1.69!570.50!NR4A1;;chr3:141087393..141087426,+!p3@ZBTB38!1.69!184.75!ZBTB38;;chr6:135502472..135502489,+!p3@MYB!1.69!47.79!MYB;;chr14:75988831..75988847,+!p2@BATF!1.68!47.30!BATF;;chr3:141121847..141121868,+!p5@ZBTB38!1.66!67.49!ZBTB38;;chr13:41593425..41593480,-!p1@ELF1!1.65!265.05!ELF1;;chr6:15246261..15246312,+!p1@JARID2!1.63!948.87!JARID2;;chr4:87857474..87857489,+!p7@AFF1!1.63!70.45!AFF1;;chr3:141150883..141150961,+!p6@ZBTB38!1.63!41.88!ZBTB38;;chr3:71179746..71179783,-!p7@FOXP1!1.62!130.06!FOXP1;;chr19:36391434..36391450,-!p1@NFKBID!1.62!78.33!NFKBID;;chr13:41635067..41635100,-!p5@ELF1!1.60!70.94!ELF1;;chr2:61108695..61108753,+!p1@REL!1.59!246.33!REL;;chr7:127032114..127032163,-!p2@ZNF800!1.59!54.69!ZNF800;;chr14:75988771..75988826,+!p1@BATF!1.56!46.80!BATF;;chr3:141151009..141151033,+!p10@ZBTB38!1.56!34.98!ZBTB38;;chr13:72441506..72441562,-!p3@DACH1!1.56!34.98!DACH1;;chr22:29196492..29196503,-!p3@XBP1!1.55!52.71!XBP1;;chr4:87928105..87928126,+!p13@AFF1!1.54!50.25!AFF1;;chr2:157189317..157189325,-!p8@NR4A2!1.54!33.99!NR4A2;;chr2:68592394..68592405,+!p2@PLEK!1.54!33.99!PLEK;;chr17:38020607..38020621,-!p9@IKZF3!1.53!33.01!IKZF3;;chr7:106810484..106810494,+!p4@HBP1!1.53!32.52!HBP1;;chr14:62162258..62162269,+!p2@HIF1A!1.52!296.09!HIF1A;;chr10:35484804..35484902,+!p2@CREM!1.51!116.27!CREM;;chr6:15246217..15246228,+!p3@JARID2!1.50!53.21!JARID2;;chr8:22550645..22550655,-!p12@EGR3!1.50!30.55!EGR3;;chr2:214014959..214015006,-!p4@IKZF2!1.50!30.55!IKZF2;;chr2:61108808..61108821,+!p3@REL!1.49!37.44!REL;;chr5:132299037..132299048,-!p7@AFF4!1.48!48.77!AFF4;;chr9:2015335..2015370,+!p1@SMARCA2!1.47!330.08!SMARCA2;;chr8:60031619..60031676,-!p1@TOX!1.47!60.60!TOX;;chr6:7108179..7108199,+!p4@RREB1!1.47!56.16!RREB1;;chr21:36260463..36260480,-!p9@RUNX1!1.46!36.95!RUNX1;;chr17:38020392..38020477,-!p1@IKZF3!1.45!27.10!IKZF3;;chr7:17338266..17338282,+!p1@AHR!1.44!276.88!AHR;;chr14:62162285..62162296,+!p3@HIF1A!1.42!127.11!HIF1A;;chr4:87928142..87928165,+!p5@AFF1!1.42!84.74!AFF1;;chr19:57901326..57901385,+!p2@ZNF548!1.41!59.12!ZNF548;;chr5:132299008..132299026,-!p5@AFF4!1.41!54.19!AFF4;;chr3:5021113..5021180,+!p1@BHLHE40!1.40!1594.26!BHLHE40;;chr10:38299441..38299450,+!p3@ZNF33A!1.40!24.14!ZNF33A;;chr13:72441074..72441172,-!p2@DACH1!1.40!24.14!DACH1;;chr14:69260437..69260442,-!p10@ZFP36L1!1.39!23.65!ZFP36L1;;chr6:15246741..15246765,+!p9@JARID2!1.39!23.65!JARID2;;chr6:144329384..144329405,-!p1@PLAGL1!1.37!249.29!PLAGL1;;chr2:214015111..214015179,-!p1@IKZF2!1.36!38.43!IKZF2;;chr20:50159198..50159299,-!p1@NFATC2!1.36!31.53!NFATC2;;chr1:158985469..158985489,+!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| |expression_enrichment_score=chr9:102584159..102584174,+!p2@NR4A3!2.97!1641.06!NR4A3;;chr8:22550982..22550999,-!p1@EGR3!2.93!2275.12!EGR3;;chr2:68592406..68592424,+!p1@PLEK!2.90!796.64!PLEK;;chr2:157189180..157189290,-!p1@NR4A2!2.67!2311.08!NR4A2;;chr13:72441315..72441454,-!p1@DACH1!2.54!670.02!DACH1;;chr10:38299412..38299430,+!p2@ZNF33A!2.51!320.23!ZNF33A;;chr9:102584128..102584144,+!p3@NR4A3!2.45!518.28!NR4A3;;chr10:64576105..64576133,-!p1@EGR2!2.44!548.83!EGR2;;chr9:102584329..102584341,+!p6@NR4A3!2.37!232.04!NR4A3;;chr10:35484053..35484076,+!p1@CREM!2.36!542.91!CREM;;chr9:102584262..102584276,+!p1@NR4A3!2.35!480.35!NR4A3;;chr6:135502501..135502546,+!p1@MYB!2.35!267.52!MYB;;chr19:36389729..36389751,-!p3@NFKBID!2.33!214.31!NFKBID;;chr17:38020557..38020572,-!p4@IKZF3!2.27!183.27!IKZF3;;chr1:158985493..158985535,+!p4@IFI16!2.26!271.46!IFI16;;chr13:41635029..41635044,-!p4@ELF1!2.24!354.72!ELF1;;chr10:35484090..35484104,+!p6@CREM!2.24!172.92!CREM;;chr14:103059455..103059488,+!p5@RCOR1!2.21!161.10!RCOR1;;chr3:71179699..71179744,-!p2@FOXP1!2.15!987.79!FOXP1;;chrX:48644984..48645005,+!p1@GATA1!2.14!135.98!GATA1;;chr7:137620650..137620677,-!p3@CREB3L2!2.11!126.61!CREB3L2;;chr2:145277640..145277771,-!p1@ZEB2!2.10!1578.00!ZEB2;;chr6:135502408..135502459,+!p2@MYB!2.10!145.34!MYB;;chr3:128212033..128212051,-!p1@GATA2!2.10!124.15!GATA2;;chr7:137620684..137620711,-!p4@CREB3L2!2.07!116.76!CREB3L2;;chr6:15246200..15246214,+!p2@JARID2!2.04!289.69!JARID2;;chr4:144435112..144435176,+!p3@SMARCA5!1.99!195.59!SMARCA5;;chr22:29196433..29196445,-!p4@XBP1!1.99!106.42!XBP1;;chr3:69788576..69788648,+!p1@MITF!1.97!461.13!MITF;;chr21:36421535..36421610,-!p2@RUNX1!1.94!295.11!RUNX1;;chr16:69600209..69600234,+!p4@NFAT5!1.93!105.43!NFAT5;;chr4:106068026..106068084,+!p1@TET2!1.91!672.49!TET2;;chr8:22550825..22550844,-!p7@EGR3!1.90!77.84!EGR3;;chr8:80679993..80680011,-!p1@HEY1!1.88!105.92!HEY1;;chr18:77155922..77155939,+!p1@NFATC1!1.87!193.12!NFATC1;;chr9:102584241..102584261,+!p4@NR4A3!1.87!110.85!NR4A3;;chr8:22550530..22550609,-!p2@EGR3!1.84!68.48!EGR3;;chr16:67063211..67063240,+!p2@CBFB!1.81!290.18!CBFB;;chr8:128747846..128747860,+!p15@MYC!1.81!63.06!MYC;;chr9:102584278..102584285,+!p5@NR4A3!1.75!55.67!NR4A3;;chr20:46130846..46130869,+!p5@NCOA3!1.74!58.63!NCOA3;;chr3:5021268..5021282,+!p4@BHLHE40!1.71!99.52!BHLHE40;;chr10:64576035..64576046,-!p2@EGR2!1.71!49.76!EGR2;;chr12:52445218..52445237,+!p1@NR4A1!1.69!570.50!NR4A1;;chr3:141087393..141087426,+!p3@ZBTB38!1.69!184.75!ZBTB38;;chr6:135502472..135502489,+!p3@MYB!1.69!47.79!MYB;;chr14:75988831..75988847,+!p2@BATF!1.68!47.30!BATF;;chr3:141121847..141121868,+!p5@ZBTB38!1.66!67.49!ZBTB38;;chr13:41593425..41593480,-!p1@ELF1!1.65!265.05!ELF1;;chr6:15246261..15246312,+!p1@JARID2!1.63!948.87!JARID2;;chr4:87857474..87857489,+!p7@AFF1!1.63!70.45!AFF1;;chr3:141150883..141150961,+!p6@ZBTB38!1.63!41.88!ZBTB38;;chr3:71179746..71179783,-!p7@FOXP1!1.62!130.06!FOXP1;;chr19:36391434..36391450,-!p1@NFKBID!1.62!78.33!NFKBID;;chr13:41635067..41635100,-!p5@ELF1!1.60!70.94!ELF1;;chr2:61108695..61108753,+!p1@REL!1.59!246.33!REL;;chr7:127032114..127032163,-!p2@ZNF800!1.59!54.69!ZNF800;;chr14:75988771..75988826,+!p1@BATF!1.56!46.80!BATF;;chr3:141151009..141151033,+!p10@ZBTB38!1.56!34.98!ZBTB38;;chr13:72441506..72441562,-!p3@DACH1!1.56!34.98!DACH1;;chr22:29196492..29196503,-!p3@XBP1!1.55!52.71!XBP1;;chr4:87928105..87928126,+!p13@AFF1!1.54!50.25!AFF1;;chr2:157189317..157189325,-!p8@NR4A2!1.54!33.99!NR4A2;;chr2:68592394..68592405,+!p2@PLEK!1.54!33.99!PLEK;;chr17:38020607..38020621,-!p9@IKZF3!1.53!33.01!IKZF3;;chr7:106810484..106810494,+!p4@HBP1!1.53!32.52!HBP1;;chr14:62162258..62162269,+!p2@HIF1A!1.52!296.09!HIF1A;;chr10:35484804..35484902,+!p2@CREM!1.51!116.27!CREM;;chr6:15246217..15246228,+!p3@JARID2!1.50!53.21!JARID2;;chr8:22550645..22550655,-!p12@EGR3!1.50!30.55!EGR3;;chr2:214014959..214015006,-!p4@IKZF2!1.50!30.55!IKZF2;;chr2:61108808..61108821,+!p3@REL!1.49!37.44!REL;;chr5:132299037..132299048,-!p7@AFF4!1.48!48.77!AFF4;;chr9:2015335..2015370,+!p1@SMARCA2!1.47!330.08!SMARCA2;;chr8:60031619..60031676,-!p1@TOX!1.47!60.60!TOX;;chr6:7108179..7108199,+!p4@RREB1!1.47!56.16!RREB1;;chr21:36260463..36260480,-!p9@RUNX1!1.46!36.95!RUNX1;;chr17:38020392..38020477,-!p1@IKZF3!1.45!27.10!IKZF3;;chr7:17338266..17338282,+!p1@AHR!1.44!276.88!AHR;;chr14:62162285..62162296,+!p3@HIF1A!1.42!127.11!HIF1A;;chr4:87928142..87928165,+!p5@AFF1!1.42!84.74!AFF1;;chr19:57901326..57901385,+!p2@ZNF548!1.41!59.12!ZNF548;;chr5:132299008..132299026,-!p5@AFF4!1.41!54.19!AFF4;;chr3:5021113..5021180,+!p1@BHLHE40!1.40!1594.26!BHLHE40;;chr10:38299441..38299450,+!p3@ZNF33A!1.40!24.14!ZNF33A;;chr13:72441074..72441172,-!p2@DACH1!1.40!24.14!DACH1;;chr14:69260437..69260442,-!p10@ZFP36L1!1.39!23.65!ZFP36L1;;chr6:15246741..15246765,+!p9@JARID2!1.39!23.65!JARID2;;chr6:144329384..144329405,-!p1@PLAGL1!1.37!249.29!PLAGL1;;chr2:214015111..214015179,-!p1@IKZF2!1.36!38.43!IKZF2;;chr20:50159198..50159299,-!p1@NFATC2!1.36!31.53!NFATC2;;chr1:158985469..158985489,+!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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000097;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000151;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000763;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000766;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002193;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002390;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002405 | |||
|ffid_belonging_in_development=CL:0000049,CL:0000134 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 45: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Mast%2520cell%2520-%2520stimulated%252c%2520donor1.CNhs11073.11487-119E2.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Mast%2520cell%2520-%2520stimulated%252c%2520donor1.CNhs11073.11487-119E2.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Mast%2520cell%2520-%2520stimulated%252c%2520donor1.CNhs11073.11487-119E2.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Mast%2520cell%2520-%2520stimulated%252c%2520donor1.CNhs11073.11487-119E2.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Mast%2520cell%2520-%2520stimulated%252c%2520donor1.CNhs11073.11487-119E2.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11487-119E2 | |id=FF:11487-119E2 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000210;;FF:0000262 | ||
|is_obsolete= | |||
|library_id=CNhs11073 | |||
|library_id_phase_based=2:CNhs11073 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11487 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10008.GCCAAT.11487 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11487 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10008.GCCAAT.11487 | |||
|name=Mast cell - stimulated, donor1 | |name=Mast cell - stimulated, donor1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 66: | ||
|profile_cagescan=NCig10052,,, | |profile_cagescan=NCig10052,,, | ||
|profile_hcage=CNhs11073,LSID723,release008,COMPLETED | |profile_hcage=CNhs11073,LSID723,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10008,,, | |profile_srnaseq=SRhi10008,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,-0.160318030086386,0,-0.27483329820609,-0.282403560576942,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.153323010348428,0,0,0,0,0,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,-0.317954060866147,0,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0,0,-0.0986404708950395,0,-0.0969923612426051,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0.173961836914205,0,0,0,0,0,0,0,0,0,0,0,0,-0.0757013843040086,-0.552571649267773,0,0,0,-0.495572488806014,-0.0141476530676715,0,0,0.148915967130485,0,-0.0980353512377064,-0.138477200800895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.096373593922461,0,0,0,-0.104570010123544,-0.444883253621725,0,0,-0.0364132912814638,0,0,0 | |||
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| |||
|rna_box=119 | |rna_box=119 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 54: | Line 81: | ||
|rna_rin= | |rna_rin= | ||
|rna_sample_type=total RNA | |rna_sample_type=total RNA | ||
|rna_tube_id= | |rna_tube_id=1.19E+04 | ||
|rna_weight_ug=24.651 | |rna_weight_ug=24.651 | ||
|rnaseq_library_id=RDhi10093!SRhi10008.GCCAAT | |||
|sample_age=76 | |sample_age=76 | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 68: | Line 97: | ||
|sample_donor(cell lot)= | |sample_donor(cell lot)= | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition=stimulated by crosslinking the high affinity Ige-R with monoclonal antibody | |sample_experimental_condition=stimulated by crosslinking the high affinity Ige-R with monoclonal antibody clone-AER-37 at 2ug/ml for 2.5hrs at 37C | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.90323251314858e-233!GO:0043227;membrane-bound organelle;2.82583883137792e-203!GO:0043231;intracellular membrane-bound organelle;7.11911501468626e-203!GO:0043226;organelle;2.38528051421025e-191!GO:0043229;intracellular organelle;1.43356849032304e-190!GO:0005737;cytoplasm;3.42794046685527e-131!GO:0044422;organelle part;7.82030965946079e-118!GO:0044446;intracellular organelle part;3.22607299858901e-116!GO:0005634;nucleus;1.63761985788385e-109!GO:0044237;cellular metabolic process;3.03922224627339e-98!GO:0044238;primary metabolic process;5.53386837489146e-97!GO:0043170;macromolecule metabolic process;9.13412435681521e-95!GO:0044444;cytoplasmic part;7.31915332271032e-89!GO:0032991;macromolecular complex;1.75659047975322e-76!GO:0044428;nuclear part;1.41543059139515e-75!GO:0043283;biopolymer metabolic process;2.1304806673501e-68!GO:0003723;RNA binding;2.25768558342151e-67!GO:0043233;organelle lumen;3.33051680116654e-67!GO:0031974;membrane-enclosed lumen;3.33051680116654e-67!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.22391191301712e-64!GO:0030529;ribonucleoprotein complex;2.39536506289366e-63!GO:0010467;gene expression;2.09838182693429e-60!GO:0005515;protein binding;1.32486395679718e-58!GO:0033036;macromolecule localization;6.76471215151855e-54!GO:0015031;protein transport;3.91336288094498e-51!GO:0006396;RNA processing;1.00621501014795e-50!GO:0045184;establishment of protein localization;8.08295661874145e-50!GO:0008104;protein localization;3.90461063752363e-49!GO:0031981;nuclear lumen;5.41784026326051e-49!GO:0003676;nucleic acid binding;2.4558298748015e-47!GO:0016071;mRNA metabolic process;8.19269922716323e-45!GO:0016043;cellular component organization and biogenesis;3.30389905694886e-41!GO:0005739;mitochondrion;1.75301354298372e-40!GO:0016070;RNA metabolic process;3.86814244169022e-40!GO:0008380;RNA splicing;3.66627219289377e-39!GO:0006397;mRNA processing;7.13597108516794e-38!GO:0043234;protein complex;1.20568352542911e-37!GO:0046907;intracellular transport;4.28231292695546e-37!GO:0031090;organelle membrane;1.76498326627626e-36!GO:0019538;protein metabolic process;2.66241568945808e-35!GO:0044267;cellular protein metabolic process;1.07451579190725e-32!GO:0006412;translation;2.36279899802666e-32!GO:0006886;intracellular protein transport;3.95190061299766e-32!GO:0044260;cellular macromolecule metabolic process;9.58737882681503e-32!GO:0051649;establishment of cellular localization;8.2739904916362e-31!GO:0006259;DNA metabolic process;1.90124677884279e-30!GO:0005654;nucleoplasm;2.20221564128813e-30!GO:0051641;cellular localization;2.83649729080973e-30!GO:0005829;cytosol;9.58845063689364e-30!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.81764030628304e-29!GO:0006996;organelle organization and biogenesis;8.72679001201684e-29!GO:0005840;ribosome;3.02171979393552e-28!GO:0005681;spliceosome;4.03124360330184e-28!GO:0044429;mitochondrial part;9.96809673626789e-28!GO:0031967;organelle envelope;1.53115161507849e-26!GO:0065003;macromolecular complex assembly;2.46556998162816e-26!GO:0031975;envelope;2.85045310597879e-26!GO:0009058;biosynthetic process;5.54109025493638e-26!GO:0000166;nucleotide binding;8.82802589289868e-25!GO:0009059;macromolecule biosynthetic process;1.74244559937102e-24!GO:0044451;nucleoplasm part;2.05384725657744e-24!GO:0044249;cellular biosynthetic process;3.19314545433067e-24!GO:0022607;cellular component assembly;8.52937517029447e-23!GO:0003735;structural constituent of ribosome;1.53576732208464e-22!GO:0007049;cell cycle;6.34543407594248e-22!GO:0043228;non-membrane-bound organelle;2.59800847949908e-21!GO:0043232;intracellular non-membrane-bound organelle;2.59800847949908e-21!GO:0016462;pyrophosphatase activity;6.29402645571333e-21!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;9.68140996712011e-21!GO:0016817;hydrolase activity, acting on acid anhydrides;1.63406243772476e-20!GO:0006974;response to DNA damage stimulus;1.79038876094604e-20!GO:0017111;nucleoside-triphosphatase activity;7.88397596469658e-20!GO:0050794;regulation of cellular process;2.13077469166716e-19!GO:0033279;ribosomal subunit;4.86880432935482e-19!GO:0005730;nucleolus;6.67453101827355e-19!GO:0006281;DNA repair;7.45357792416398e-18!GO:0005740;mitochondrial envelope;1.8380018752717e-17!GO:0022402;cell cycle process;4.49326133469229e-17!GO:0022618;protein-RNA complex assembly;4.61795796783016e-17!GO:0019866;organelle inner membrane;4.66471622265836e-17!GO:0032553;ribonucleotide binding;5.28658588538208e-17!GO:0032555;purine ribonucleotide binding;5.28658588538208e-17!GO:0016604;nuclear body;5.76239993770125e-17!GO:0031966;mitochondrial membrane;8.79061872987642e-17!GO:0016874;ligase activity;9.95069609506068e-17!GO:0012505;endomembrane system;1.03281449994459e-16!GO:0017076;purine nucleotide binding;3.8004927118755e-16!GO:0006457;protein folding;4.81194148512586e-16!GO:0006512;ubiquitin cycle;5.07069306473586e-16!GO:0012501;programmed cell death;5.8905399797581e-16!GO:0006915;apoptosis;7.35442327061544e-16!GO:0019222;regulation of metabolic process;9.05834857875917e-16!GO:0051276;chromosome organization and biogenesis;1.08298019110921e-15!GO:0008219;cell death;1.13141785198881e-15!GO:0016265;death;1.13141785198881e-15!GO:0048770;pigment granule;1.56856191370768e-15!GO:0042470;melanosome;1.56856191370768e-15!GO:0005743;mitochondrial inner membrane;2.02102707945088e-15!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.26415431595243e-15!GO:0006119;oxidative phosphorylation;5.27105797170931e-15!GO:0044445;cytosolic part;5.3856991981516e-15!GO:0008134;transcription factor binding;9.37888342022323e-15!GO:0016192;vesicle-mediated transport;1.12778461877238e-14!GO:0005694;chromosome;1.46861046956128e-14!GO:0016607;nuclear speck;1.65923805889686e-14!GO:0009719;response to endogenous stimulus;2.71789192634085e-14!GO:0006605;protein targeting;2.94134476546115e-14!GO:0050789;regulation of biological process;3.86757900205444e-14!GO:0008135;translation factor activity, nucleic acid binding;8.55049986644288e-14!GO:0005524;ATP binding;9.83465400746753e-14!GO:0044265;cellular macromolecule catabolic process;1.44372190114924e-13!GO:0000398;nuclear mRNA splicing, via spliceosome;2.75981260315173e-13!GO:0000375;RNA splicing, via transesterification reactions;2.75981260315173e-13!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.75981260315173e-13!GO:0000502;proteasome complex (sensu Eukaryota);3.84309540196173e-13!GO:0006913;nucleocytoplasmic transport;4.18856046748608e-13!GO:0031323;regulation of cellular metabolic process;4.72771407806952e-13!GO:0032559;adenyl ribonucleotide binding;5.15037357047592e-13!GO:0048193;Golgi vesicle transport;6.49135373821823e-13!GO:0051169;nuclear transport;8.35895675238595e-13!GO:0043412;biopolymer modification;8.89608077960982e-13!GO:0006350;transcription;9.25064205363981e-13!GO:0042254;ribosome biogenesis and assembly;1.03431376459257e-12!GO:0016887;ATPase activity;1.11556217701414e-12!GO:0051603;proteolysis involved in cellular protein catabolic process;1.15616194529529e-12!GO:0042623;ATPase activity, coupled;1.27436647981261e-12!GO:0004386;helicase activity;1.38433030700201e-12!GO:0006511;ubiquitin-dependent protein catabolic process;1.55849348645749e-12!GO:0019941;modification-dependent protein catabolic process;1.61119042079594e-12!GO:0043632;modification-dependent macromolecule catabolic process;1.61119042079594e-12!GO:0044257;cellular protein catabolic process;1.97029985107785e-12!GO:0005783;endoplasmic reticulum;2.54362668759219e-12!GO:0031980;mitochondrial lumen;2.78314883409008e-12!GO:0005759;mitochondrial matrix;2.78314883409008e-12!GO:0006325;establishment and/or maintenance of chromatin architecture;2.86552737128475e-12!GO:0030554;adenyl nucleotide binding;3.96763619921935e-12!GO:0000278;mitotic cell cycle;5.73062311544335e-12!GO:0051726;regulation of cell cycle;5.78788237689445e-12!GO:0000074;regulation of progression through cell cycle;6.12562216692353e-12!GO:0006323;DNA packaging;1.09774042130336e-11!GO:0044455;mitochondrial membrane part;1.29729097842411e-11!GO:0008026;ATP-dependent helicase activity;1.61409230403079e-11!GO:0051082;unfolded protein binding;1.66988001323221e-11!GO:0006446;regulation of translational initiation;1.97766214443836e-11!GO:0005794;Golgi apparatus;2.47529840346631e-11!GO:0010468;regulation of gene expression;2.77630257048006e-11!GO:0043285;biopolymer catabolic process;2.8797995789376e-11!GO:0044432;endoplasmic reticulum part;3.50383751800625e-11!GO:0003743;translation initiation factor activity;3.64883195184379e-11!GO:0006413;translational initiation;4.04910792258129e-11!GO:0044427;chromosomal part;5.44535448696062e-11!GO:0048523;negative regulation of cellular process;6.22704174570806e-11!GO:0032774;RNA biosynthetic process;6.64194375244896e-11!GO:0050657;nucleic acid transport;6.78105193862516e-11!GO:0051236;establishment of RNA localization;6.78105193862516e-11!GO:0050658;RNA transport;6.78105193862516e-11!GO:0042981;regulation of apoptosis;7.21430296247825e-11!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.3720078108689e-11!GO:0006351;transcription, DNA-dependent;8.009426737958e-11!GO:0043067;regulation of programmed cell death;9.81713325490551e-11!GO:0006464;protein modification process;1.07112575505765e-10!GO:0051301;cell division;1.10008281573534e-10!GO:0006403;RNA localization;1.15048638063347e-10!GO:0044248;cellular catabolic process;1.849829708078e-10!GO:0065007;biological regulation;2.1403972364823e-10!GO:0044453;nuclear membrane part;2.61897469329127e-10!GO:0043687;post-translational protein modification;2.65327454024165e-10!GO:0015935;small ribosomal subunit;5.32104092642846e-10!GO:0048519;negative regulation of biological process;5.41199911568887e-10!GO:0000087;M phase of mitotic cell cycle;5.57764964330465e-10!GO:0009057;macromolecule catabolic process;7.95818140802858e-10!GO:0022403;cell cycle phase;8.47457247172459e-10!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;8.98790057365676e-10!GO:0006888;ER to Golgi vesicle-mediated transport;1.19331015509412e-09!GO:0007067;mitosis;1.27729254397141e-09!GO:0015934;large ribosomal subunit;1.48968632164402e-09!GO:0005635;nuclear envelope;1.48968632164402e-09!GO:0043566;structure-specific DNA binding;1.70893058290279e-09!GO:0005746;mitochondrial respiratory chain;1.82093751601854e-09!GO:0065004;protein-DNA complex assembly;1.87345201166786e-09!GO:0003712;transcription cofactor activity;2.08777141891248e-09!GO:0006333;chromatin assembly or disassembly;2.20651477185823e-09!GO:0006260;DNA replication;2.67060472580377e-09!GO:0031965;nuclear membrane;2.81865806396992e-09!GO:0006366;transcription from RNA polymerase II promoter;3.14530183901572e-09!GO:0051028;mRNA transport;3.61973535861818e-09!GO:0016568;chromatin modification;3.61973535861818e-09!GO:0045449;regulation of transcription;3.67034518715057e-09!GO:0005643;nuclear pore;4.25681521862384e-09!GO:0008270;zinc ion binding;5.21431488697564e-09!GO:0008639;small protein conjugating enzyme activity;5.54432905398735e-09!GO:0030163;protein catabolic process;6.9769994816603e-09!GO:0042175;nuclear envelope-endoplasmic reticulum network;7.4234313636492e-09!GO:0006364;rRNA processing;7.73238831859138e-09!GO:0006355;regulation of transcription, DNA-dependent;7.73892568141399e-09!GO:0051186;cofactor metabolic process;8.67876557508902e-09!GO:0004842;ubiquitin-protein ligase activity;8.71751298530243e-09!GO:0017038;protein import;1.09036472335807e-08!GO:0016072;rRNA metabolic process;1.09880667492638e-08!GO:0005789;endoplasmic reticulum membrane;1.20117431172916e-08!GO:0019787;small conjugating protein ligase activity;1.34773041669047e-08!GO:0050136;NADH dehydrogenase (quinone) activity;1.43781137265384e-08!GO:0003954;NADH dehydrogenase activity;1.43781137265384e-08!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.43781137265384e-08!GO:0065002;intracellular protein transport across a membrane;1.64765419331169e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.78354103838442e-08!GO:0000279;M phase;2.08719717646608e-08!GO:0003677;DNA binding;2.99461267331768e-08!GO:0003697;single-stranded DNA binding;4.08338989135266e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;4.44906228740167e-08!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;5.17399808512139e-08!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);5.22813324955757e-08!GO:0042775;organelle ATP synthesis coupled electron transport;7.88458471602416e-08!GO:0042773;ATP synthesis coupled electron transport;7.88458471602416e-08!GO:0046930;pore complex;1.05956108873329e-07!GO:0006793;phosphorus metabolic process;1.1785497619883e-07!GO:0006796;phosphate metabolic process;1.1785497619883e-07!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.32043763396531e-07!GO:0046914;transition metal ion binding;2.26846034909854e-07!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.29532325653464e-07!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.32172104349156e-07!GO:0043069;negative regulation of programmed cell death;2.32996211392167e-07!GO:0006732;coenzyme metabolic process;2.47230381616862e-07!GO:0030964;NADH dehydrogenase complex (quinone);2.62419325205434e-07!GO:0045271;respiratory chain complex I;2.62419325205434e-07!GO:0005747;mitochondrial respiratory chain complex I;2.62419325205434e-07!GO:0051246;regulation of protein metabolic process;2.66824373307373e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.8791682075004e-07!GO:0008565;protein transporter activity;2.92289016107964e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.95058033492242e-07!GO:0019829;cation-transporting ATPase activity;3.38137171503573e-07!GO:0006163;purine nucleotide metabolic process;3.567112668582e-07!GO:0016881;acid-amino acid ligase activity;3.66188368084804e-07!GO:0015630;microtubule cytoskeleton;3.6923988072215e-07!GO:0043066;negative regulation of apoptosis;3.81890576887361e-07!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.33489659438633e-07!GO:0006399;tRNA metabolic process;5.0297114189827e-07!GO:0045786;negative regulation of progression through cell cycle;5.52266745545235e-07!GO:0051170;nuclear import;5.83795302859994e-07!GO:0009259;ribonucleotide metabolic process;5.83795302859994e-07!GO:0005761;mitochondrial ribosome;7.41761944811991e-07!GO:0000313;organellar ribosome;7.41761944811991e-07!GO:0015986;ATP synthesis coupled proton transport;7.58817177932714e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;7.58817177932714e-07!GO:0006916;anti-apoptosis;7.88554545849081e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;8.85635389366845e-07!GO:0006164;purine nucleotide biosynthetic process;9.87312304039545e-07!GO:0019899;enzyme binding;1.11954250251062e-06!GO:0016779;nucleotidyltransferase activity;1.33926684406729e-06!GO:0009150;purine ribonucleotide metabolic process;1.42741002251841e-06!GO:0005793;ER-Golgi intermediate compartment;1.64205987409606e-06!GO:0006606;protein import into nucleus;1.72568743010661e-06!GO:0005813;centrosome;1.87109943262718e-06!GO:0046034;ATP metabolic process;1.92644078202538e-06!GO:0016363;nuclear matrix;1.92644078202538e-06!GO:0003713;transcription coactivator activity;1.93462166833723e-06!GO:0000785;chromatin;1.97599215364466e-06!GO:0005768;endosome;2.23123425817811e-06!GO:0003724;RNA helicase activity;2.74189255428247e-06!GO:0009199;ribonucleoside triphosphate metabolic process;2.79060913172353e-06!GO:0016563;transcription activator activity;2.877650322421e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.89089007372429e-06!GO:0009144;purine nucleoside triphosphate metabolic process;2.89089007372429e-06!GO:0003924;GTPase activity;3.02663529566937e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;3.39378223897876e-06!GO:0007243;protein kinase cascade;3.48647097446496e-06!GO:0006613;cotranslational protein targeting to membrane;3.48647097446496e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;3.48850206759607e-06!GO:0048475;coated membrane;3.76039174147085e-06!GO:0030117;membrane coat;3.76039174147085e-06!GO:0005525;GTP binding;3.86124944486519e-06!GO:0009152;purine ribonucleotide biosynthetic process;3.96763799010047e-06!GO:0031988;membrane-bound vesicle;4.26546981440398e-06!GO:0009141;nucleoside triphosphate metabolic process;4.35824830893209e-06!GO:0030120;vesicle coat;4.54523775031922e-06!GO:0030662;coated vesicle membrane;4.54523775031922e-06!GO:0009260;ribonucleotide biosynthetic process;4.67186844884394e-06!GO:0015078;hydrogen ion transmembrane transporter activity;4.74382708056766e-06!GO:0006754;ATP biosynthetic process;4.80399994657625e-06!GO:0006753;nucleoside phosphate metabolic process;4.80399994657625e-06!GO:0043038;amino acid activation;5.21891012705997e-06!GO:0006418;tRNA aminoacylation for protein translation;5.21891012705997e-06!GO:0043039;tRNA aminoacylation;5.21891012705997e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;5.23355393697074e-06!GO:0004812;aminoacyl-tRNA ligase activity;5.23355393697074e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;5.23355393697074e-06!GO:0032940;secretion by cell;5.4237389798594e-06!GO:0016469;proton-transporting two-sector ATPase complex;5.64521070793949e-06!GO:0005815;microtubule organizing center;6.52731376627395e-06!GO:0016787;hydrolase activity;6.95876680832362e-06!GO:0016310;phosphorylation;7.11933577198803e-06!GO:0051168;nuclear export;7.43698214534919e-06!GO:0031982;vesicle;8.6177814176582e-06!GO:0009142;nucleoside triphosphate biosynthetic process;8.80239804333535e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;8.80239804333535e-06!GO:0006402;mRNA catabolic process;8.87772731505349e-06!GO:0045045;secretory pathway;8.87772731505349e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;9.00774920079865e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;9.00774920079865e-06!GO:0006461;protein complex assembly;9.20390135352357e-06!GO:0000245;spliceosome assembly;9.90551113454999e-06!GO:0005770;late endosome;1.1043725536733e-05!GO:0009060;aerobic respiration;1.34061804001875e-05!GO:0003690;double-stranded DNA binding;1.36523574653984e-05!GO:0032446;protein modification by small protein conjugation;1.42976564370549e-05!GO:0045333;cellular respiration;1.63806452105287e-05!GO:0016023;cytoplasmic membrane-bound vesicle;1.73854617294045e-05!GO:0006950;response to stress;1.85130470025407e-05!GO:0006334;nucleosome assembly;2.33697875352988e-05!GO:0051427;hormone receptor binding;2.35640974460045e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;2.55158394710932e-05!GO:0005839;proteasome core complex (sensu Eukaryota);2.6076468357043e-05!GO:0032561;guanyl ribonucleotide binding;2.65959437266489e-05!GO:0019001;guanyl nucleotide binding;2.65959437266489e-05!GO:0051789;response to protein stimulus;2.70990449332886e-05!GO:0006986;response to unfolded protein;2.70990449332886e-05!GO:0044431;Golgi apparatus part;2.78103241921689e-05!GO:0016567;protein ubiquitination;2.84126774665683e-05!GO:0006310;DNA recombination;2.84320021360884e-05!GO:0030532;small nuclear ribonucleoprotein complex;3.06604683041356e-05!GO:0033673;negative regulation of kinase activity;3.08606826934353e-05!GO:0006469;negative regulation of protein kinase activity;3.08606826934353e-05!GO:0016251;general RNA polymerase II transcription factor activity;3.49029210659677e-05!GO:0009055;electron carrier activity;3.50381452927237e-05!GO:0005773;vacuole;3.57831629130105e-05!GO:0005819;spindle;3.60871219582635e-05!GO:0016197;endosome transport;3.61103806263899e-05!GO:0031410;cytoplasmic vesicle;4.01606363851407e-05!GO:0035257;nuclear hormone receptor binding;4.26759699978254e-05!GO:0030521;androgen receptor signaling pathway;4.46675425284208e-05!GO:0051188;cofactor biosynthetic process;4.80062011016795e-05!GO:0051348;negative regulation of transferase activity;4.89347837971467e-05!GO:0006302;double-strand break repair;6.00885409665298e-05!GO:0031497;chromatin assembly;6.28435894483653e-05!GO:0065009;regulation of a molecular function;6.28435894483653e-05!GO:0031324;negative regulation of cellular metabolic process;6.34698968625091e-05!GO:0009056;catabolic process;6.54789618684022e-05!GO:0004298;threonine endopeptidase activity;6.76007999980481e-05!GO:0016740;transferase activity;7.31743386222237e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;7.64166616704068e-05!GO:0008654;phospholipid biosynthetic process;8.04361783810367e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;8.48357214397086e-05!GO:0045259;proton-transporting ATP synthase complex;0.000107080384519192!GO:0000151;ubiquitin ligase complex;0.000111611933924561!GO:0008186;RNA-dependent ATPase activity;0.000124769516677267!GO:0030518;steroid hormone receptor signaling pathway;0.00013621957491329!GO:0009108;coenzyme biosynthetic process;0.000141859827297688!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000169647446090985!GO:0015399;primary active transmembrane transporter activity;0.000169647446090985!GO:0007059;chromosome segregation;0.000170032766109467!GO:0044440;endosomal part;0.000170489120550205!GO:0010008;endosome membrane;0.000170489120550205!GO:0006401;RNA catabolic process;0.000180790178015616!GO:0006261;DNA-dependent DNA replication;0.000180790178015616!GO:0006099;tricarboxylic acid cycle;0.000183239066251137!GO:0046356;acetyl-CoA catabolic process;0.000183239066251137!GO:0006752;group transfer coenzyme metabolic process;0.000186503042263019!GO:0005798;Golgi-associated vesicle;0.000186972310242583!GO:0031252;leading edge;0.000189091699086296!GO:0007242;intracellular signaling cascade;0.00020577466955667!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000216018931190018!GO:0009892;negative regulation of metabolic process;0.000233208695494955!GO:0003729;mRNA binding;0.000233924628924486!GO:0008047;enzyme activator activity;0.000247451676382419!GO:0000075;cell cycle checkpoint;0.000255369631196986!GO:0031072;heat shock protein binding;0.000276347438467436!GO:0044452;nucleolar part;0.000284874851703124!GO:0006352;transcription initiation;0.000305360523927013!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00030587606124846!GO:0000323;lytic vacuole;0.00030587606124846!GO:0005764;lysosome;0.00030587606124846!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000321279306238866!GO:0006084;acetyl-CoA metabolic process;0.000327209549761128!GO:0007005;mitochondrion organization and biogenesis;0.00033424700156745!GO:0006612;protein targeting to membrane;0.000347787763779873!GO:0004004;ATP-dependent RNA helicase activity;0.000389111684083882!GO:0006891;intra-Golgi vesicle-mediated transport;0.000412145960374962!GO:0043065;positive regulation of apoptosis;0.00043460279714299!GO:0006383;transcription from RNA polymerase III promoter;0.000452971486358732!GO:0006917;induction of apoptosis;0.000453427183463812!GO:0006818;hydrogen transport;0.000466256326986424!GO:0000776;kinetochore;0.000467443643226468!GO:0048522;positive regulation of cellular process;0.00049053312935313!GO:0043623;cellular protein complex assembly;0.00049053312935313!GO:0030522;intracellular receptor-mediated signaling pathway;0.000506058430859625!GO:0015992;proton transport;0.000562657095259568!GO:0048500;signal recognition particle;0.000611137382229897!GO:0043068;positive regulation of programmed cell death;0.000611137382229897!GO:0012502;induction of programmed cell death;0.000631075553340564!GO:0009967;positive regulation of signal transduction;0.000631347741519018!GO:0051187;cofactor catabolic process;0.000643655488711131!GO:0009615;response to virus;0.000660833469318989!GO:0043021;ribonucleoprotein binding;0.000719273319649519!GO:0022406;membrane docking;0.000722608501808007!GO:0048278;vesicle docking;0.000722608501808007!GO:0043086;negative regulation of catalytic activity;0.000740595161450228!GO:0006405;RNA export from nucleus;0.000759253943668303!GO:0043492;ATPase activity, coupled to movement of substances;0.000775590493524543!GO:0022415;viral reproductive process;0.000815198817468809!GO:0030384;phosphoinositide metabolic process;0.000824491903952619!GO:0043407;negative regulation of MAP kinase activity;0.000838676855146331!GO:0003899;DNA-directed RNA polymerase activity;0.000851237496055269!GO:0007050;cell cycle arrest;0.000871233640931168!GO:0000139;Golgi membrane;0.000900340027194745!GO:0051329;interphase of mitotic cell cycle;0.000901241198387385!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000927244846062789!GO:0009109;coenzyme catabolic process;0.000930136628582416!GO:0050790;regulation of catalytic activity;0.000975274928645122!GO:0035258;steroid hormone receptor binding;0.000980180903193275!GO:0006607;NLS-bearing substrate import into nucleus;0.00103134534697035!GO:0004527;exonuclease activity;0.00103980007563974!GO:0030880;RNA polymerase complex;0.00109458067798757!GO:0000775;chromosome, pericentric region;0.00117007371653306!GO:0005096;GTPase activator activity;0.00118374881023422!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00119119502232017!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00122544812116657!GO:0000428;DNA-directed RNA polymerase complex;0.00122544812116657!GO:0005667;transcription factor complex;0.00124674052935351!GO:0030127;COPII vesicle coat;0.00128945238208942!GO:0012507;ER to Golgi transport vesicle membrane;0.00128945238208942!GO:0030134;ER to Golgi transport vesicle;0.00129649713508843!GO:0005885;Arp2/3 protein complex;0.00132926082824454!GO:0051252;regulation of RNA metabolic process;0.00138222059331016!GO:0032984;macromolecular complex disassembly;0.00139704898291665!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00144405537259594!GO:0006904;vesicle docking during exocytosis;0.0014852489821993!GO:0051325;interphase;0.0015951031209646!GO:0005769;early endosome;0.00165867716153182!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00165867716153182!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00165867716153182!GO:0045047;protein targeting to ER;0.00165867716153182!GO:0005788;endoplasmic reticulum lumen;0.00168680529153012!GO:0009117;nucleotide metabolic process;0.00174204364381702!GO:0016481;negative regulation of transcription;0.00177336222785547!GO:0016564;transcription repressor activity;0.00178410431121514!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00185324914709357!GO:0030658;transport vesicle membrane;0.00195533164616835!GO:0005048;signal sequence binding;0.00204672544466378!GO:0008312;7S RNA binding;0.00214061854449278!GO:0051052;regulation of DNA metabolic process;0.00214061854449278!GO:0016853;isomerase activity;0.00215152985286369!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00216267743642708!GO:0022411;cellular component disassembly;0.00219564375120933!GO:0008610;lipid biosynthetic process;0.00226493980649187!GO:0003684;damaged DNA binding;0.00232764334309708!GO:0043681;protein import into mitochondrion;0.00242072990914733!GO:0006091;generation of precursor metabolites and energy;0.00259049302294586!GO:0043241;protein complex disassembly;0.00277679189151952!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00282040253806473!GO:0006417;regulation of translation;0.00282040253806473!GO:0003678;DNA helicase activity;0.00311267880448388!GO:0007051;spindle organization and biogenesis;0.00330523336989837!GO:0030663;COPI coated vesicle membrane;0.00330523336989837!GO:0030126;COPI vesicle coat;0.00330523336989837!GO:0043624;cellular protein complex disassembly;0.00339784101151232!GO:0031326;regulation of cellular biosynthetic process;0.00339784101151232!GO:0033367;protein localization in mast cell secretory granule;0.00339784101151232!GO:0033365;protein localization in organelle;0.00339784101151232!GO:0033371;T cell secretory granule organization and biogenesis;0.00339784101151232!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.00339784101151232!GO:0033375;protease localization in T cell secretory granule;0.00339784101151232!GO:0042629;mast cell granule;0.00339784101151232!GO:0033377;maintenance of protein localization in T cell secretory granule;0.00339784101151232!GO:0033364;mast cell secretory granule organization and biogenesis;0.00339784101151232!GO:0033380;granzyme B localization in T cell secretory granule;0.00339784101151232!GO:0033379;maintenance of protease localization in T cell secretory granule;0.00339784101151232!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.00339784101151232!GO:0033368;protease localization in mast cell secretory granule;0.00339784101151232!GO:0033366;protein localization in secretory granule;0.00339784101151232!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.00339784101151232!GO:0033374;protein localization in T cell secretory granule;0.00339784101151232!GO:0016126;sterol biosynthetic process;0.00349694924301418!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00358375928191899!GO:0006643;membrane lipid metabolic process;0.00370110324934365!GO:0051338;regulation of transferase activity;0.00374356991095552!GO:0016859;cis-trans isomerase activity;0.00375911643513201!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00376014253160311!GO:0003711;transcription elongation regulator activity;0.00384045564815205!GO:0012506;vesicle membrane;0.00391898074302216!GO:0003682;chromatin binding;0.00400433818107547!GO:0006650;glycerophospholipid metabolic process;0.00410786174519666!GO:0050681;androgen receptor binding;0.00416722463634225!GO:0046467;membrane lipid biosynthetic process;0.00435679698076268!GO:0007264;small GTPase mediated signal transduction;0.00436356778156165!GO:0045859;regulation of protein kinase activity;0.00446384096711585!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00450510170534889!GO:0005657;replication fork;0.00453082042429015!GO:0019371;cyclooxygenase pathway;0.00482211101745805!GO:0030660;Golgi-associated vesicle membrane;0.00482465413914076!GO:0047485;protein N-terminus binding;0.00486991546048926!GO:0018193;peptidyl-amino acid modification;0.00490139522593716!GO:0043549;regulation of kinase activity;0.00496147229319057!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00502572790956646!GO:0030695;GTPase regulator activity;0.00506947221521162!GO:0015631;tubulin binding;0.00517174096331067!GO:0019079;viral genome replication;0.00533069077052625!GO:0006672;ceramide metabolic process;0.00543605245409711!GO:0030659;cytoplasmic vesicle membrane;0.00561780383752759!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00575353811420519!GO:0000339;RNA cap binding;0.00586703033130141!GO:0006367;transcription initiation from RNA polymerase II promoter;0.00629643400711967!GO:0060090;molecular adaptor activity;0.00630119767101865!GO:0009889;regulation of biosynthetic process;0.00636777426845308!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00637267405507834!GO:0007034;vacuolar transport;0.00641018926835358!GO:0000209;protein polyubiquitination;0.00676276542227446!GO:0008139;nuclear localization sequence binding;0.00687154363390844!GO:0019058;viral infectious cycle;0.00716131436555293!GO:0005801;cis-Golgi network;0.0073544411779362!GO:0004261;cathepsin G activity;0.0076271586839987!GO:0006944;membrane fusion;0.00764104175327177!GO:0000082;G1/S transition of mitotic cell cycle;0.00868539300446098!GO:0007041;lysosomal transport;0.00886122270401843!GO:0019372;lipoxygenase pathway;0.00899575288604792!GO:0031625;ubiquitin protein ligase binding;0.00906166780081415!GO:0030867;rough endoplasmic reticulum membrane;0.00918737237063752!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00918737237063752!GO:0001726;ruffle;0.00918737237063752!GO:0031968;organelle outer membrane;0.0099060393973518!GO:0006695;cholesterol biosynthetic process;0.0102407406812176!GO:0005874;microtubule;0.0103095946373134!GO:0046966;thyroid hormone receptor binding;0.0103095946373134!GO:0048518;positive regulation of biological process;0.0105225268136744!GO:0004518;nuclease activity;0.0105290776498596!GO:0031902;late endosome membrane;0.0105580985079828!GO:0030137;COPI-coated vesicle;0.010681277069179!GO:0003714;transcription corepressor activity;0.010681277069179!GO:0032200;telomere organization and biogenesis;0.0107139684651583!GO:0000723;telomere maintenance;0.0107139684651583!GO:0043488;regulation of mRNA stability;0.01073804442851!GO:0043487;regulation of RNA stability;0.01073804442851!GO:0030176;integral to endoplasmic reticulum membrane;0.0110505537400423!GO:0007006;mitochondrial membrane organization and biogenesis;0.0111007170747179!GO:0007052;mitotic spindle organization and biogenesis;0.0111007170747179!GO:0044433;cytoplasmic vesicle part;0.0111015258886323!GO:0048468;cell development;0.0111391936825028!GO:0048487;beta-tubulin binding;0.012016361405969!GO:0019752;carboxylic acid metabolic process;0.0122717679573144!GO:0045792;negative regulation of cell size;0.0123589096857111!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0124069848600517!GO:0019867;outer membrane;0.0127400589888188!GO:0008168;methyltransferase activity;0.0127400589888188!GO:0000188;inactivation of MAPK activity;0.0128498164617283!GO:0006611;protein export from nucleus;0.0128498164617283!GO:0016741;transferase activity, transferring one-carbon groups;0.013724931847498!GO:0006289;nucleotide-excision repair;0.0137322697057189!GO:0030036;actin cytoskeleton organization and biogenesis;0.0137654065065631!GO:0015980;energy derivation by oxidation of organic compounds;0.0140377696292577!GO:0051920;peroxiredoxin activity;0.0141588884393068!GO:0045454;cell redox homeostasis;0.0142015995247464!GO:0000049;tRNA binding;0.0142153007127335!GO:0008017;microtubule binding;0.0144850764350604!GO:0006626;protein targeting to mitochondrion;0.0146713540210714!GO:0005741;mitochondrial outer membrane;0.0147089366302732!GO:0008234;cysteine-type peptidase activity;0.0148110216742944!GO:0016491;oxidoreductase activity;0.0153375849745469!GO:0046519;sphingoid metabolic process;0.0157323798181122!GO:0030308;negative regulation of cell growth;0.0157403915768293!GO:0006633;fatty acid biosynthetic process;0.0157558068873783!GO:0006082;organic acid metabolic process;0.0158787461976637!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.0160430766548532!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.0160430766548532!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.0160430766548532!GO:0022890;inorganic cation transmembrane transporter activity;0.0163947445295782!GO:0048471;perinuclear region of cytoplasm;0.0165457034173572!GO:0007088;regulation of mitosis;0.0165457034173572!GO:0008629;induction of apoptosis by intracellular signals;0.0167282030264267!GO:0032040;small subunit processome;0.0169535848682412!GO:0005135;interleukin-3 receptor binding;0.0174032589075983!GO:0007093;mitotic cell cycle checkpoint;0.017670427086078!GO:0005774;vacuolar membrane;0.017987448346625!GO:0016408;C-acyltransferase activity;0.0188042113616552!GO:0006376;mRNA splice site selection;0.0189609259983627!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0189609259983627!GO:0030968;unfolded protein response;0.0191910617747845!GO:0019377;glycolipid catabolic process;0.020081434111828!GO:0007030;Golgi organization and biogenesis;0.0201032348557462!GO:0005070;SH3/SH2 adaptor activity;0.0201348218569197!GO:0016584;nucleosome positioning;0.0203132133449901!GO:0033116;ER-Golgi intermediate compartment membrane;0.0203566509723035!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0205149725272691!GO:0016044;membrane organization and biogenesis;0.0206067726463741!GO:0006414;translational elongation;0.0206348034276313!GO:0046489;phosphoinositide biosynthetic process;0.0206672336041624!GO:0042393;histone binding;0.0210166632066575!GO:0008033;tRNA processing;0.0212015406151472!GO:0035035;histone acetyltransferase binding;0.0212431166256787!GO:0046394;carboxylic acid biosynthetic process;0.0214450154461575!GO:0016053;organic acid biosynthetic process;0.0214450154461575!GO:0006984;ER-nuclear signaling pathway;0.0228162143403844!GO:0042026;protein refolding;0.0231359814519449!GO:0008094;DNA-dependent ATPase activity;0.0235078974255468!GO:0005637;nuclear inner membrane;0.0235078974255468!GO:0006644;phospholipid metabolic process;0.0236529061459302!GO:0006839;mitochondrial transport;0.023920852159342!GO:0046474;glycerophospholipid biosynthetic process;0.0243414028698097!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.0247153515820973!GO:0046588;negative regulation of calcium-dependent cell-cell adhesion;0.0251894300067224!GO:0046586;regulation of calcium-dependent cell-cell adhesion;0.0251894300067224!GO:0007004;telomere maintenance via telomerase;0.025526818281532!GO:0051087;chaperone binding;0.0257190451625199!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0257190451625199!GO:0009165;nucleotide biosynthetic process;0.0257244871841679!GO:0045576;mast cell activation;0.0262997894099117!GO:0000314;organellar small ribosomal subunit;0.0266552283071875!GO:0005763;mitochondrial small ribosomal subunit;0.0266552283071875!GO:0005484;SNAP receptor activity;0.0270714327538369!GO:0030258;lipid modification;0.027268283508922!GO:0002761;regulation of myeloid leukocyte differentiation;0.0273358666013614!GO:0042770;DNA damage response, signal transduction;0.0279079679497169!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0279680319233454!GO:0007010;cytoskeleton organization and biogenesis;0.028437594586933!GO:0031901;early endosome membrane;0.0285038902967513!GO:0000726;non-recombinational repair;0.0286296911285691!GO:0003725;double-stranded RNA binding;0.0287244968400837!GO:0045926;negative regulation of growth;0.0288117488387689!GO:0016311;dephosphorylation;0.0291248117301195!GO:0051053;negative regulation of DNA metabolic process;0.0295411745641017!GO:0006406;mRNA export from nucleus;0.0296027639053851!GO:0005684;U2-dependent spliceosome;0.0296027639053851!GO:0051059;NF-kappaB binding;0.0300648968775796!GO:0045893;positive regulation of transcription, DNA-dependent;0.0303806593862391!GO:0005876;spindle microtubule;0.0304970057503432!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0305470976015336!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0305470976015336!GO:0042802;identical protein binding;0.0315134804695539!GO:0019843;rRNA binding;0.0322604466737823!GO:0051540;metal cluster binding;0.0322604466737823!GO:0051536;iron-sulfur cluster binding;0.0322604466737823!GO:0004003;ATP-dependent DNA helicase activity;0.032297811055027!GO:0044437;vacuolar part;0.0329370227793804!GO:0005020;stem cell factor receptor activity;0.0332021366604118!GO:0000228;nuclear chromosome;0.0335080783529527!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0339358602342329!GO:0008624;induction of apoptosis by extracellular signals;0.0339958793375982!GO:0004576;oligosaccharyl transferase activity;0.0340203723614245!GO:0032508;DNA duplex unwinding;0.0344929672927987!GO:0032392;DNA geometric change;0.0344929672927987!GO:0016601;Rac protein signal transduction;0.0345490731878112!GO:0008632;apoptotic program;0.0354794984911327!GO:0044255;cellular lipid metabolic process;0.0355595840685234!GO:0005869;dynactin complex;0.036190890788365!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0363988571594602!GO:0045892;negative regulation of transcription, DNA-dependent;0.0372540902585063!GO:0000922;spindle pole;0.0376554820026998!GO:0046488;phosphatidylinositol metabolic process;0.0379050823030324!GO:0000781;chromosome, telomeric region;0.0389337196141084!GO:0006266;DNA ligation;0.0391044784651292!GO:0016455;RNA polymerase II transcription mediator activity;0.0398542438346333!GO:0000059;protein import into nucleus, docking;0.0406094663492029!GO:0051098;regulation of binding;0.0407145895167776!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0407520004387959!GO:0008333;endosome to lysosome transport;0.0409639524035728!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0409825098953596!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0409825098953596!GO:0006400;tRNA modification;0.0413073216665341!GO:0051539;4 iron, 4 sulfur cluster binding;0.0415402268618455!GO:0005765;lysosomal membrane;0.0415931611388917!GO:0030133;transport vesicle;0.041910638275215!GO:0005832;chaperonin-containing T-complex;0.0419169666536481!GO:0004278;granzyme B activity;0.0427821911918265!GO:0051287;NAD binding;0.0436273476724726!GO:0045545;syndecan binding;0.0436273476724726!GO:0005895;interleukin-5 receptor complex;0.0436273476724726!GO:0009112;nucleobase metabolic process;0.0437651404655224!GO:0030041;actin filament polymerization;0.044582704892666!GO:0008180;signalosome;0.0446400576815992!GO:0009066;aspartate family amino acid metabolic process;0.0457202814212723!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.0461219337911217!GO:0046854;phosphoinositide phosphorylation;0.0461219337911217!GO:0005083;small GTPase regulator activity;0.0461341789199224!GO:0003746;translation elongation factor activity;0.0461701646703682!GO:0031124;mRNA 3'-end processing;0.0462670476749416!GO:0006338;chromatin remodeling;0.0476779569950595!GO:0003702;RNA polymerase II transcription factor activity;0.0489064356987881!GO:0005129;granulocyte macrophage colony-stimulating factor receptor binding;0.0491717000974653!GO:0046479;glycosphingolipid catabolic process;0.0492924401851576!GO:0030149;sphingolipid catabolic process;0.0499105571051695!GO:0009451;RNA modification;0.0499854054462792!GO:0035034;histone acetyltransferase regulator activity;0.0499854054462792 | |sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.90323251314858e-233!GO:0043227;membrane-bound organelle;2.82583883137792e-203!GO:0043231;intracellular membrane-bound organelle;7.11911501468626e-203!GO:0043226;organelle;2.38528051421025e-191!GO:0043229;intracellular organelle;1.43356849032304e-190!GO:0005737;cytoplasm;3.42794046685527e-131!GO:0044422;organelle part;7.82030965946079e-118!GO:0044446;intracellular organelle part;3.22607299858901e-116!GO:0005634;nucleus;1.63761985788385e-109!GO:0044237;cellular metabolic process;3.03922224627339e-98!GO:0044238;primary metabolic process;5.53386837489146e-97!GO:0043170;macromolecule metabolic process;9.13412435681521e-95!GO:0044444;cytoplasmic part;7.31915332271032e-89!GO:0032991;macromolecular complex;1.75659047975322e-76!GO:0044428;nuclear part;1.41543059139515e-75!GO:0043283;biopolymer metabolic process;2.1304806673501e-68!GO:0003723;RNA binding;2.25768558342151e-67!GO:0043233;organelle lumen;3.33051680116654e-67!GO:0031974;membrane-enclosed lumen;3.33051680116654e-67!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.22391191301712e-64!GO:0030529;ribonucleoprotein complex;2.39536506289366e-63!GO:0010467;gene expression;2.09838182693429e-60!GO:0005515;protein binding;1.32486395679718e-58!GO:0033036;macromolecule localization;6.76471215151855e-54!GO:0015031;protein transport;3.91336288094498e-51!GO:0006396;RNA processing;1.00621501014795e-50!GO:0045184;establishment of protein localization;8.08295661874145e-50!GO:0008104;protein localization;3.90461063752363e-49!GO:0031981;nuclear lumen;5.41784026326051e-49!GO:0003676;nucleic acid binding;2.4558298748015e-47!GO:0016071;mRNA metabolic process;8.19269922716323e-45!GO:0016043;cellular component organization and biogenesis;3.30389905694886e-41!GO:0005739;mitochondrion;1.75301354298372e-40!GO:0016070;RNA metabolic process;3.86814244169022e-40!GO:0008380;RNA splicing;3.66627219289377e-39!GO:0006397;mRNA processing;7.13597108516794e-38!GO:0043234;protein complex;1.20568352542911e-37!GO:0046907;intracellular transport;4.28231292695546e-37!GO:0031090;organelle membrane;1.76498326627626e-36!GO:0019538;protein metabolic process;2.66241568945808e-35!GO:0044267;cellular protein metabolic process;1.07451579190725e-32!GO:0006412;translation;2.36279899802666e-32!GO:0006886;intracellular protein transport;3.95190061299766e-32!GO:0044260;cellular macromolecule metabolic process;9.58737882681503e-32!GO:0051649;establishment of cellular localization;8.2739904916362e-31!GO:0006259;DNA metabolic process;1.90124677884279e-30!GO:0005654;nucleoplasm;2.20221564128813e-30!GO:0051641;cellular localization;2.83649729080973e-30!GO:0005829;cytosol;9.58845063689364e-30!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.81764030628304e-29!GO:0006996;organelle organization and biogenesis;8.72679001201684e-29!GO:0005840;ribosome;3.02171979393552e-28!GO:0005681;spliceosome;4.03124360330184e-28!GO:0044429;mitochondrial part;9.96809673626789e-28!GO:0031967;organelle envelope;1.53115161507849e-26!GO:0065003;macromolecular complex assembly;2.46556998162816e-26!GO:0031975;envelope;2.85045310597879e-26!GO:0009058;biosynthetic process;5.54109025493638e-26!GO:0000166;nucleotide binding;8.82802589289868e-25!GO:0009059;macromolecule biosynthetic process;1.74244559937102e-24!GO:0044451;nucleoplasm part;2.05384725657744e-24!GO:0044249;cellular biosynthetic process;3.19314545433067e-24!GO:0022607;cellular component assembly;8.52937517029447e-23!GO:0003735;structural constituent of ribosome;1.53576732208464e-22!GO:0007049;cell cycle;6.34543407594248e-22!GO:0043228;non-membrane-bound organelle;2.59800847949908e-21!GO:0043232;intracellular non-membrane-bound organelle;2.59800847949908e-21!GO:0016462;pyrophosphatase activity;6.29402645571333e-21!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;9.68140996712011e-21!GO:0016817;hydrolase activity, acting on acid anhydrides;1.63406243772476e-20!GO:0006974;response to DNA damage stimulus;1.79038876094604e-20!GO:0017111;nucleoside-triphosphatase activity;7.88397596469658e-20!GO:0050794;regulation of cellular process;2.13077469166716e-19!GO:0033279;ribosomal subunit;4.86880432935482e-19!GO:0005730;nucleolus;6.67453101827355e-19!GO:0006281;DNA repair;7.45357792416398e-18!GO:0005740;mitochondrial envelope;1.8380018752717e-17!GO:0022402;cell cycle process;4.49326133469229e-17!GO:0022618;protein-RNA complex assembly;4.61795796783016e-17!GO:0019866;organelle inner membrane;4.66471622265836e-17!GO:0032553;ribonucleotide binding;5.28658588538208e-17!GO:0032555;purine ribonucleotide binding;5.28658588538208e-17!GO:0016604;nuclear body;5.76239993770125e-17!GO:0031966;mitochondrial membrane;8.79061872987642e-17!GO:0016874;ligase activity;9.95069609506068e-17!GO:0012505;endomembrane system;1.03281449994459e-16!GO:0017076;purine nucleotide binding;3.8004927118755e-16!GO:0006457;protein folding;4.81194148512586e-16!GO:0006512;ubiquitin cycle;5.07069306473586e-16!GO:0012501;programmed cell death;5.8905399797581e-16!GO:0006915;apoptosis;7.35442327061544e-16!GO:0019222;regulation of metabolic process;9.05834857875917e-16!GO:0051276;chromosome organization and biogenesis;1.08298019110921e-15!GO:0008219;cell death;1.13141785198881e-15!GO:0016265;death;1.13141785198881e-15!GO:0048770;pigment granule;1.56856191370768e-15!GO:0042470;melanosome;1.56856191370768e-15!GO:0005743;mitochondrial inner membrane;2.02102707945088e-15!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.26415431595243e-15!GO:0006119;oxidative phosphorylation;5.27105797170931e-15!GO:0044445;cytosolic part;5.3856991981516e-15!GO:0008134;transcription factor binding;9.37888342022323e-15!GO:0016192;vesicle-mediated transport;1.12778461877238e-14!GO:0005694;chromosome;1.46861046956128e-14!GO:0016607;nuclear speck;1.65923805889686e-14!GO:0009719;response to endogenous stimulus;2.71789192634085e-14!GO:0006605;protein targeting;2.94134476546115e-14!GO:0050789;regulation of biological process;3.86757900205444e-14!GO:0008135;translation factor activity, nucleic acid binding;8.55049986644288e-14!GO:0005524;ATP binding;9.83465400746753e-14!GO:0044265;cellular macromolecule catabolic process;1.44372190114924e-13!GO:0000398;nuclear mRNA splicing, via spliceosome;2.75981260315173e-13!GO:0000375;RNA splicing, via transesterification reactions;2.75981260315173e-13!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.75981260315173e-13!GO:0000502;proteasome complex (sensu Eukaryota);3.84309540196173e-13!GO:0006913;nucleocytoplasmic transport;4.18856046748608e-13!GO:0031323;regulation of cellular metabolic process;4.72771407806952e-13!GO:0032559;adenyl ribonucleotide binding;5.15037357047592e-13!GO:0048193;Golgi vesicle transport;6.49135373821823e-13!GO:0051169;nuclear transport;8.35895675238595e-13!GO:0043412;biopolymer modification;8.89608077960982e-13!GO:0006350;transcription;9.25064205363981e-13!GO:0042254;ribosome biogenesis and assembly;1.03431376459257e-12!GO:0016887;ATPase activity;1.11556217701414e-12!GO:0051603;proteolysis involved in cellular protein catabolic process;1.15616194529529e-12!GO:0042623;ATPase activity, coupled;1.27436647981261e-12!GO:0004386;helicase activity;1.38433030700201e-12!GO:0006511;ubiquitin-dependent protein catabolic process;1.55849348645749e-12!GO:0019941;modification-dependent protein catabolic process;1.61119042079594e-12!GO:0043632;modification-dependent macromolecule catabolic process;1.61119042079594e-12!GO:0044257;cellular protein catabolic process;1.97029985107785e-12!GO:0005783;endoplasmic reticulum;2.54362668759219e-12!GO:0031980;mitochondrial lumen;2.78314883409008e-12!GO:0005759;mitochondrial matrix;2.78314883409008e-12!GO:0006325;establishment and/or maintenance of chromatin architecture;2.86552737128475e-12!GO:0030554;adenyl nucleotide binding;3.96763619921935e-12!GO:0000278;mitotic cell cycle;5.73062311544335e-12!GO:0051726;regulation of cell cycle;5.78788237689445e-12!GO:0000074;regulation of progression through cell cycle;6.12562216692353e-12!GO:0006323;DNA packaging;1.09774042130336e-11!GO:0044455;mitochondrial membrane part;1.29729097842411e-11!GO:0008026;ATP-dependent helicase activity;1.61409230403079e-11!GO:0051082;unfolded protein binding;1.66988001323221e-11!GO:0006446;regulation of translational initiation;1.97766214443836e-11!GO:0005794;Golgi apparatus;2.47529840346631e-11!GO:0010468;regulation of gene expression;2.77630257048006e-11!GO:0043285;biopolymer catabolic process;2.8797995789376e-11!GO:0044432;endoplasmic reticulum part;3.50383751800625e-11!GO:0003743;translation initiation factor activity;3.64883195184379e-11!GO:0006413;translational initiation;4.04910792258129e-11!GO:0044427;chromosomal part;5.44535448696062e-11!GO:0048523;negative regulation of cellular process;6.22704174570806e-11!GO:0032774;RNA biosynthetic process;6.64194375244896e-11!GO:0050657;nucleic acid transport;6.78105193862516e-11!GO:0051236;establishment of RNA localization;6.78105193862516e-11!GO:0050658;RNA transport;6.78105193862516e-11!GO:0042981;regulation of apoptosis;7.21430296247825e-11!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.3720078108689e-11!GO:0006351;transcription, DNA-dependent;8.009426737958e-11!GO:0043067;regulation of programmed cell death;9.81713325490551e-11!GO:0006464;protein modification process;1.07112575505765e-10!GO:0051301;cell division;1.10008281573534e-10!GO:0006403;RNA localization;1.15048638063347e-10!GO:0044248;cellular catabolic process;1.849829708078e-10!GO:0065007;biological regulation;2.1403972364823e-10!GO:0044453;nuclear membrane part;2.61897469329127e-10!GO:0043687;post-translational protein modification;2.65327454024165e-10!GO:0015935;small ribosomal subunit;5.32104092642846e-10!GO:0048519;negative regulation of biological process;5.41199911568887e-10!GO:0000087;M phase of mitotic cell cycle;5.57764964330465e-10!GO:0009057;macromolecule catabolic process;7.95818140802858e-10!GO:0022403;cell cycle phase;8.47457247172459e-10!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;8.98790057365676e-10!GO:0006888;ER to Golgi vesicle-mediated transport;1.19331015509412e-09!GO:0007067;mitosis;1.27729254397141e-09!GO:0015934;large ribosomal subunit;1.48968632164402e-09!GO:0005635;nuclear envelope;1.48968632164402e-09!GO:0043566;structure-specific DNA binding;1.70893058290279e-09!GO:0005746;mitochondrial respiratory chain;1.82093751601854e-09!GO:0065004;protein-DNA complex assembly;1.87345201166786e-09!GO:0003712;transcription cofactor activity;2.08777141891248e-09!GO:0006333;chromatin assembly or disassembly;2.20651477185823e-09!GO:0006260;DNA replication;2.67060472580377e-09!GO:0031965;nuclear membrane;2.81865806396992e-09!GO:0006366;transcription from RNA polymerase II promoter;3.14530183901572e-09!GO:0051028;mRNA transport;3.61973535861818e-09!GO:0016568;chromatin modification;3.61973535861818e-09!GO:0045449;regulation of transcription;3.67034518715057e-09!GO:0005643;nuclear pore;4.25681521862384e-09!GO:0008270;zinc ion binding;5.21431488697564e-09!GO:0008639;small protein conjugating enzyme activity;5.54432905398735e-09!GO:0030163;protein catabolic process;6.9769994816603e-09!GO:0042175;nuclear envelope-endoplasmic reticulum network;7.4234313636492e-09!GO:0006364;rRNA processing;7.73238831859138e-09!GO:0006355;regulation of transcription, DNA-dependent;7.73892568141399e-09!GO:0051186;cofactor metabolic process;8.67876557508902e-09!GO:0004842;ubiquitin-protein ligase activity;8.71751298530243e-09!GO:0017038;protein import;1.09036472335807e-08!GO:0016072;rRNA metabolic process;1.09880667492638e-08!GO:0005789;endoplasmic reticulum membrane;1.20117431172916e-08!GO:0019787;small conjugating protein ligase activity;1.34773041669047e-08!GO:0050136;NADH dehydrogenase (quinone) activity;1.43781137265384e-08!GO:0003954;NADH dehydrogenase activity;1.43781137265384e-08!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.43781137265384e-08!GO:0065002;intracellular protein transport across a membrane;1.64765419331169e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.78354103838442e-08!GO:0000279;M phase;2.08719717646608e-08!GO:0003677;DNA binding;2.99461267331768e-08!GO:0003697;single-stranded DNA binding;4.08338989135266e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;4.44906228740167e-08!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;5.17399808512139e-08!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);5.22813324955757e-08!GO:0042775;organelle ATP synthesis coupled electron transport;7.88458471602416e-08!GO:0042773;ATP synthesis coupled electron transport;7.88458471602416e-08!GO:0046930;pore complex;1.05956108873329e-07!GO:0006793;phosphorus metabolic process;1.1785497619883e-07!GO:0006796;phosphate metabolic process;1.1785497619883e-07!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.32043763396531e-07!GO:0046914;transition metal ion binding;2.26846034909854e-07!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.29532325653464e-07!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.32172104349156e-07!GO:0043069;negative regulation of programmed cell death;2.32996211392167e-07!GO:0006732;coenzyme metabolic process;2.47230381616862e-07!GO:0030964;NADH dehydrogenase complex (quinone);2.62419325205434e-07!GO:0045271;respiratory chain complex I;2.62419325205434e-07!GO:0005747;mitochondrial respiratory chain complex I;2.62419325205434e-07!GO:0051246;regulation of protein metabolic process;2.66824373307373e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.8791682075004e-07!GO:0008565;protein transporter activity;2.92289016107964e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.95058033492242e-07!GO:0019829;cation-transporting ATPase activity;3.38137171503573e-07!GO:0006163;purine nucleotide metabolic process;3.567112668582e-07!GO:0016881;acid-amino acid ligase activity;3.66188368084804e-07!GO:0015630;microtubule cytoskeleton;3.6923988072215e-07!GO:0043066;negative regulation of apoptosis;3.81890576887361e-07!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.33489659438633e-07!GO:0006399;tRNA metabolic process;5.0297114189827e-07!GO:0045786;negative regulation of progression through cell cycle;5.52266745545235e-07!GO:0051170;nuclear import;5.83795302859994e-07!GO:0009259;ribonucleotide metabolic process;5.83795302859994e-07!GO:0005761;mitochondrial ribosome;7.41761944811991e-07!GO:0000313;organellar ribosome;7.41761944811991e-07!GO:0015986;ATP synthesis coupled proton transport;7.58817177932714e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;7.58817177932714e-07!GO:0006916;anti-apoptosis;7.88554545849081e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;8.85635389366845e-07!GO:0006164;purine nucleotide biosynthetic process;9.87312304039545e-07!GO:0019899;enzyme binding;1.11954250251062e-06!GO:0016779;nucleotidyltransferase activity;1.33926684406729e-06!GO:0009150;purine ribonucleotide metabolic process;1.42741002251841e-06!GO:0005793;ER-Golgi intermediate compartment;1.64205987409606e-06!GO:0006606;protein import into nucleus;1.72568743010661e-06!GO:0005813;centrosome;1.87109943262718e-06!GO:0046034;ATP metabolic process;1.92644078202538e-06!GO:0016363;nuclear matrix;1.92644078202538e-06!GO:0003713;transcription coactivator activity;1.93462166833723e-06!GO:0000785;chromatin;1.97599215364466e-06!GO:0005768;endosome;2.23123425817811e-06!GO:0003724;RNA helicase activity;2.74189255428247e-06!GO:0009199;ribonucleoside triphosphate metabolic process;2.79060913172353e-06!GO:0016563;transcription activator activity;2.877650322421e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.89089007372429e-06!GO:0009144;purine nucleoside triphosphate metabolic process;2.89089007372429e-06!GO:0003924;GTPase activity;3.02663529566937e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;3.39378223897876e-06!GO:0007243;protein kinase cascade;3.48647097446496e-06!GO:0006613;cotranslational protein targeting to membrane;3.48647097446496e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;3.48850206759607e-06!GO:0048475;coated membrane;3.76039174147085e-06!GO:0030117;membrane coat;3.76039174147085e-06!GO:0005525;GTP binding;3.86124944486519e-06!GO:0009152;purine ribonucleotide biosynthetic process;3.96763799010047e-06!GO:0031988;membrane-bound vesicle;4.26546981440398e-06!GO:0009141;nucleoside triphosphate metabolic process;4.35824830893209e-06!GO:0030120;vesicle coat;4.54523775031922e-06!GO:0030662;coated vesicle membrane;4.54523775031922e-06!GO:0009260;ribonucleotide biosynthetic process;4.67186844884394e-06!GO:0015078;hydrogen ion transmembrane transporter activity;4.74382708056766e-06!GO:0006754;ATP biosynthetic process;4.80399994657625e-06!GO:0006753;nucleoside phosphate metabolic process;4.80399994657625e-06!GO:0043038;amino acid activation;5.21891012705997e-06!GO:0006418;tRNA aminoacylation for protein translation;5.21891012705997e-06!GO:0043039;tRNA aminoacylation;5.21891012705997e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;5.23355393697074e-06!GO:0004812;aminoacyl-tRNA ligase activity;5.23355393697074e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;5.23355393697074e-06!GO:0032940;secretion by cell;5.4237389798594e-06!GO:0016469;proton-transporting two-sector ATPase complex;5.64521070793949e-06!GO:0005815;microtubule organizing center;6.52731376627395e-06!GO:0016787;hydrolase activity;6.95876680832362e-06!GO:0016310;phosphorylation;7.11933577198803e-06!GO:0051168;nuclear export;7.43698214534919e-06!GO:0031982;vesicle;8.6177814176582e-06!GO:0009142;nucleoside triphosphate biosynthetic process;8.80239804333535e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;8.80239804333535e-06!GO:0006402;mRNA catabolic process;8.87772731505349e-06!GO:0045045;secretory pathway;8.87772731505349e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;9.00774920079865e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;9.00774920079865e-06!GO:0006461;protein complex assembly;9.20390135352357e-06!GO:0000245;spliceosome assembly;9.90551113454999e-06!GO:0005770;late endosome;1.1043725536733e-05!GO:0009060;aerobic respiration;1.34061804001875e-05!GO:0003690;double-stranded DNA binding;1.36523574653984e-05!GO:0032446;protein modification by small protein conjugation;1.42976564370549e-05!GO:0045333;cellular respiration;1.63806452105287e-05!GO:0016023;cytoplasmic membrane-bound vesicle;1.73854617294045e-05!GO:0006950;response to stress;1.85130470025407e-05!GO:0006334;nucleosome assembly;2.33697875352988e-05!GO:0051427;hormone receptor binding;2.35640974460045e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;2.55158394710932e-05!GO:0005839;proteasome core complex (sensu Eukaryota);2.6076468357043e-05!GO:0032561;guanyl ribonucleotide binding;2.65959437266489e-05!GO:0019001;guanyl nucleotide binding;2.65959437266489e-05!GO:0051789;response to protein stimulus;2.70990449332886e-05!GO:0006986;response to unfolded protein;2.70990449332886e-05!GO:0044431;Golgi apparatus part;2.78103241921689e-05!GO:0016567;protein ubiquitination;2.84126774665683e-05!GO:0006310;DNA recombination;2.84320021360884e-05!GO:0030532;small nuclear ribonucleoprotein complex;3.06604683041356e-05!GO:0033673;negative regulation of kinase activity;3.08606826934353e-05!GO:0006469;negative regulation of protein kinase activity;3.08606826934353e-05!GO:0016251;general RNA polymerase II transcription factor activity;3.49029210659677e-05!GO:0009055;electron carrier activity;3.50381452927237e-05!GO:0005773;vacuole;3.57831629130105e-05!GO:0005819;spindle;3.60871219582635e-05!GO:0016197;endosome transport;3.61103806263899e-05!GO:0031410;cytoplasmic vesicle;4.01606363851407e-05!GO:0035257;nuclear hormone receptor binding;4.26759699978254e-05!GO:0030521;androgen receptor signaling pathway;4.46675425284208e-05!GO:0051188;cofactor biosynthetic process;4.80062011016795e-05!GO:0051348;negative regulation of transferase activity;4.89347837971467e-05!GO:0006302;double-strand break repair;6.00885409665298e-05!GO:0031497;chromatin assembly;6.28435894483653e-05!GO:0065009;regulation of a molecular function;6.28435894483653e-05!GO:0031324;negative regulation of cellular metabolic process;6.34698968625091e-05!GO:0009056;catabolic process;6.54789618684022e-05!GO:0004298;threonine endopeptidase activity;6.76007999980481e-05!GO:0016740;transferase activity;7.31743386222237e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;7.64166616704068e-05!GO:0008654;phospholipid biosynthetic process;8.04361783810367e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;8.48357214397086e-05!GO:0045259;proton-transporting ATP synthase complex;0.000107080384519192!GO:0000151;ubiquitin ligase complex;0.000111611933924561!GO:0008186;RNA-dependent ATPase activity;0.000124769516677267!GO:0030518;steroid hormone receptor signaling pathway;0.00013621957491329!GO:0009108;coenzyme biosynthetic process;0.000141859827297688!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000169647446090985!GO:0015399;primary active transmembrane transporter activity;0.000169647446090985!GO:0007059;chromosome segregation;0.000170032766109467!GO:0044440;endosomal part;0.000170489120550205!GO:0010008;endosome membrane;0.000170489120550205!GO:0006401;RNA catabolic process;0.000180790178015616!GO:0006261;DNA-dependent DNA replication;0.000180790178015616!GO:0006099;tricarboxylic acid cycle;0.000183239066251137!GO:0046356;acetyl-CoA catabolic process;0.000183239066251137!GO:0006752;group transfer coenzyme metabolic process;0.000186503042263019!GO:0005798;Golgi-associated vesicle;0.000186972310242583!GO:0031252;leading edge;0.000189091699086296!GO:0007242;intracellular signaling cascade;0.00020577466955667!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000216018931190018!GO:0009892;negative regulation of metabolic process;0.000233208695494955!GO:0003729;mRNA binding;0.000233924628924486!GO:0008047;enzyme activator activity;0.000247451676382419!GO:0000075;cell cycle checkpoint;0.000255369631196986!GO:0031072;heat shock protein binding;0.000276347438467436!GO:0044452;nucleolar part;0.000284874851703124!GO:0006352;transcription initiation;0.000305360523927013!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00030587606124846!GO:0000323;lytic vacuole;0.00030587606124846!GO:0005764;lysosome;0.00030587606124846!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000321279306238866!GO:0006084;acetyl-CoA metabolic process;0.000327209549761128!GO:0007005;mitochondrion organization and biogenesis;0.00033424700156745!GO:0006612;protein targeting to membrane;0.000347787763779873!GO:0004004;ATP-dependent RNA helicase activity;0.000389111684083882!GO:0006891;intra-Golgi vesicle-mediated transport;0.000412145960374962!GO:0043065;positive regulation of apoptosis;0.00043460279714299!GO:0006383;transcription from RNA polymerase III promoter;0.000452971486358732!GO:0006917;induction of apoptosis;0.000453427183463812!GO:0006818;hydrogen transport;0.000466256326986424!GO:0000776;kinetochore;0.000467443643226468!GO:0048522;positive regulation of cellular process;0.00049053312935313!GO:0043623;cellular protein complex assembly;0.00049053312935313!GO:0030522;intracellular receptor-mediated signaling pathway;0.000506058430859625!GO:0015992;proton transport;0.000562657095259568!GO:0048500;signal recognition particle;0.000611137382229897!GO:0043068;positive regulation of programmed cell death;0.000611137382229897!GO:0012502;induction of programmed cell death;0.000631075553340564!GO:0009967;positive regulation of signal transduction;0.000631347741519018!GO:0051187;cofactor catabolic process;0.000643655488711131!GO:0009615;response to virus;0.000660833469318989!GO:0043021;ribonucleoprotein binding;0.000719273319649519!GO:0022406;membrane docking;0.000722608501808007!GO:0048278;vesicle docking;0.000722608501808007!GO:0043086;negative regulation of catalytic activity;0.000740595161450228!GO:0006405;RNA export from nucleus;0.000759253943668303!GO:0043492;ATPase activity, coupled to movement of substances;0.000775590493524543!GO:0022415;viral reproductive process;0.000815198817468809!GO:0030384;phosphoinositide metabolic process;0.000824491903952619!GO:0043407;negative regulation of MAP kinase activity;0.000838676855146331!GO:0003899;DNA-directed RNA polymerase activity;0.000851237496055269!GO:0007050;cell cycle arrest;0.000871233640931168!GO:0000139;Golgi membrane;0.000900340027194745!GO:0051329;interphase of mitotic cell cycle;0.000901241198387385!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000927244846062789!GO:0009109;coenzyme catabolic process;0.000930136628582416!GO:0050790;regulation of catalytic activity;0.000975274928645122!GO:0035258;steroid hormone receptor binding;0.000980180903193275!GO:0006607;NLS-bearing substrate import into nucleus;0.00103134534697035!GO:0004527;exonuclease activity;0.00103980007563974!GO:0030880;RNA polymerase complex;0.00109458067798757!GO:0000775;chromosome, pericentric region;0.00117007371653306!GO:0005096;GTPase activator activity;0.00118374881023422!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00119119502232017!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00122544812116657!GO:0000428;DNA-directed RNA polymerase complex;0.00122544812116657!GO:0005667;transcription factor complex;0.00124674052935351!GO:0030127;COPII vesicle coat;0.00128945238208942!GO:0012507;ER to Golgi transport vesicle membrane;0.00128945238208942!GO:0030134;ER to Golgi transport vesicle;0.00129649713508843!GO:0005885;Arp2/3 protein complex;0.00132926082824454!GO:0051252;regulation of RNA metabolic process;0.00138222059331016!GO:0032984;macromolecular complex disassembly;0.00139704898291665!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00144405537259594!GO:0006904;vesicle docking during exocytosis;0.0014852489821993!GO:0051325;interphase;0.0015951031209646!GO:0005769;early endosome;0.00165867716153182!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00165867716153182!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00165867716153182!GO:0045047;protein targeting to ER;0.00165867716153182!GO:0005788;endoplasmic reticulum lumen;0.00168680529153012!GO:0009117;nucleotide metabolic process;0.00174204364381702!GO:0016481;negative regulation of transcription;0.00177336222785547!GO:0016564;transcription repressor activity;0.00178410431121514!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00185324914709357!GO:0030658;transport vesicle membrane;0.00195533164616835!GO:0005048;signal sequence binding;0.00204672544466378!GO:0008312;7S RNA binding;0.00214061854449278!GO:0051052;regulation of DNA metabolic process;0.00214061854449278!GO:0016853;isomerase activity;0.00215152985286369!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00216267743642708!GO:0022411;cellular component disassembly;0.00219564375120933!GO:0008610;lipid biosynthetic process;0.00226493980649187!GO:0003684;damaged DNA binding;0.00232764334309708!GO:0043681;protein import into mitochondrion;0.00242072990914733!GO:0006091;generation of precursor metabolites and energy;0.00259049302294586!GO:0043241;protein complex disassembly;0.00277679189151952!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00282040253806473!GO:0006417;regulation of translation;0.00282040253806473!GO:0003678;DNA helicase activity;0.00311267880448388!GO:0007051;spindle organization and biogenesis;0.00330523336989837!GO:0030663;COPI coated vesicle membrane;0.00330523336989837!GO:0030126;COPI vesicle coat;0.00330523336989837!GO:0043624;cellular protein complex disassembly;0.00339784101151232!GO:0031326;regulation of cellular biosynthetic process;0.00339784101151232!GO:0033367;protein localization in mast cell secretory granule;0.00339784101151232!GO:0033365;protein localization in organelle;0.00339784101151232!GO:0033371;T cell secretory granule organization and biogenesis;0.00339784101151232!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.00339784101151232!GO:0033375;protease localization in T cell secretory granule;0.00339784101151232!GO:0042629;mast cell granule;0.00339784101151232!GO:0033377;maintenance of protein localization in T cell secretory granule;0.00339784101151232!GO:0033364;mast cell secretory granule organization and biogenesis;0.00339784101151232!GO:0033380;granzyme B localization in T cell secretory granule;0.00339784101151232!GO:0033379;maintenance of protease localization in T cell secretory granule;0.00339784101151232!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.00339784101151232!GO:0033368;protease localization in mast cell secretory granule;0.00339784101151232!GO:0033366;protein localization in secretory granule;0.00339784101151232!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.00339784101151232!GO:0033374;protein localization in T cell secretory granule;0.00339784101151232!GO:0016126;sterol biosynthetic process;0.00349694924301418!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00358375928191899!GO:0006643;membrane lipid metabolic process;0.00370110324934365!GO:0051338;regulation of transferase activity;0.00374356991095552!GO:0016859;cis-trans isomerase activity;0.00375911643513201!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00376014253160311!GO:0003711;transcription elongation regulator activity;0.00384045564815205!GO:0012506;vesicle membrane;0.00391898074302216!GO:0003682;chromatin binding;0.00400433818107547!GO:0006650;glycerophospholipid metabolic process;0.00410786174519666!GO:0050681;androgen receptor binding;0.00416722463634225!GO:0046467;membrane lipid biosynthetic process;0.00435679698076268!GO:0007264;small GTPase mediated signal transduction;0.00436356778156165!GO:0045859;regulation of protein kinase activity;0.00446384096711585!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00450510170534889!GO:0005657;replication fork;0.00453082042429015!GO:0019371;cyclooxygenase pathway;0.00482211101745805!GO:0030660;Golgi-associated vesicle membrane;0.00482465413914076!GO:0047485;protein N-terminus binding;0.00486991546048926!GO:0018193;peptidyl-amino acid modification;0.00490139522593716!GO:0043549;regulation of kinase activity;0.00496147229319057!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00502572790956646!GO:0030695;GTPase regulator activity;0.00506947221521162!GO:0015631;tubulin binding;0.00517174096331067!GO:0019079;viral genome replication;0.00533069077052625!GO:0006672;ceramide metabolic process;0.00543605245409711!GO:0030659;cytoplasmic vesicle membrane;0.00561780383752759!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00575353811420519!GO:0000339;RNA cap binding;0.00586703033130141!GO:0006367;transcription initiation from RNA polymerase II promoter;0.00629643400711967!GO:0060090;molecular adaptor activity;0.00630119767101865!GO:0009889;regulation of biosynthetic process;0.00636777426845308!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00637267405507834!GO:0007034;vacuolar transport;0.00641018926835358!GO:0000209;protein polyubiquitination;0.00676276542227446!GO:0008139;nuclear localization sequence binding;0.00687154363390844!GO:0019058;viral infectious cycle;0.00716131436555293!GO:0005801;cis-Golgi network;0.0073544411779362!GO:0004261;cathepsin G activity;0.0076271586839987!GO:0006944;membrane fusion;0.00764104175327177!GO:0000082;G1/S transition of mitotic cell cycle;0.00868539300446098!GO:0007041;lysosomal transport;0.00886122270401843!GO:0019372;lipoxygenase pathway;0.00899575288604792!GO:0031625;ubiquitin protein ligase binding;0.00906166780081415!GO:0030867;rough endoplasmic reticulum membrane;0.00918737237063752!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00918737237063752!GO:0001726;ruffle;0.00918737237063752!GO:0031968;organelle outer membrane;0.0099060393973518!GO:0006695;cholesterol biosynthetic process;0.0102407406812176!GO:0005874;microtubule;0.0103095946373134!GO:0046966;thyroid hormone receptor binding;0.0103095946373134!GO:0048518;positive regulation of biological process;0.0105225268136744!GO:0004518;nuclease activity;0.0105290776498596!GO:0031902;late endosome membrane;0.0105580985079828!GO:0030137;COPI-coated vesicle;0.010681277069179!GO:0003714;transcription corepressor activity;0.010681277069179!GO:0032200;telomere organization and biogenesis;0.0107139684651583!GO:0000723;telomere maintenance;0.0107139684651583!GO:0043488;regulation of mRNA stability;0.01073804442851!GO:0043487;regulation of RNA stability;0.01073804442851!GO:0030176;integral to endoplasmic reticulum membrane;0.0110505537400423!GO:0007006;mitochondrial membrane organization and biogenesis;0.0111007170747179!GO:0007052;mitotic spindle organization and biogenesis;0.0111007170747179!GO:0044433;cytoplasmic vesicle part;0.0111015258886323!GO:0048468;cell development;0.0111391936825028!GO:0048487;beta-tubulin binding;0.012016361405969!GO:0019752;carboxylic acid metabolic process;0.0122717679573144!GO:0045792;negative regulation of cell size;0.0123589096857111!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0124069848600517!GO:0019867;outer membrane;0.0127400589888188!GO:0008168;methyltransferase activity;0.0127400589888188!GO:0000188;inactivation of MAPK activity;0.0128498164617283!GO:0006611;protein export from nucleus;0.0128498164617283!GO:0016741;transferase activity, transferring one-carbon groups;0.013724931847498!GO:0006289;nucleotide-excision repair;0.0137322697057189!GO:0030036;actin cytoskeleton organization and biogenesis;0.0137654065065631!GO:0015980;energy derivation by oxidation of organic compounds;0.0140377696292577!GO:0051920;peroxiredoxin activity;0.0141588884393068!GO:0045454;cell redox homeostasis;0.0142015995247464!GO:0000049;tRNA binding;0.0142153007127335!GO:0008017;microtubule binding;0.0144850764350604!GO:0006626;protein targeting to mitochondrion;0.0146713540210714!GO:0005741;mitochondrial outer membrane;0.0147089366302732!GO:0008234;cysteine-type peptidase activity;0.0148110216742944!GO:0016491;oxidoreductase activity;0.0153375849745469!GO:0046519;sphingoid metabolic process;0.0157323798181122!GO:0030308;negative regulation of cell growth;0.0157403915768293!GO:0006633;fatty acid biosynthetic process;0.0157558068873783!GO:0006082;organic acid metabolic process;0.0158787461976637!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.0160430766548532!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.0160430766548532!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.0160430766548532!GO:0022890;inorganic cation transmembrane transporter activity;0.0163947445295782!GO:0048471;perinuclear region of cytoplasm;0.0165457034173572!GO:0007088;regulation of mitosis;0.0165457034173572!GO:0008629;induction of apoptosis by intracellular signals;0.0167282030264267!GO:0032040;small subunit processome;0.0169535848682412!GO:0005135;interleukin-3 receptor binding;0.0174032589075983!GO:0007093;mitotic cell cycle checkpoint;0.017670427086078!GO:0005774;vacuolar membrane;0.017987448346625!GO:0016408;C-acyltransferase activity;0.0188042113616552!GO:0006376;mRNA splice site selection;0.0189609259983627!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0189609259983627!GO:0030968;unfolded protein response;0.0191910617747845!GO:0019377;glycolipid catabolic process;0.020081434111828!GO:0007030;Golgi organization and biogenesis;0.0201032348557462!GO:0005070;SH3/SH2 adaptor activity;0.0201348218569197!GO:0016584;nucleosome positioning;0.0203132133449901!GO:0033116;ER-Golgi intermediate compartment membrane;0.0203566509723035!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0205149725272691!GO:0016044;membrane organization and biogenesis;0.0206067726463741!GO:0006414;translational elongation;0.0206348034276313!GO:0046489;phosphoinositide biosynthetic process;0.0206672336041624!GO:0042393;histone binding;0.0210166632066575!GO:0008033;tRNA processing;0.0212015406151472!GO:0035035;histone acetyltransferase binding;0.0212431166256787!GO:0046394;carboxylic acid biosynthetic process;0.0214450154461575!GO:0016053;organic acid biosynthetic process;0.0214450154461575!GO:0006984;ER-nuclear signaling pathway;0.0228162143403844!GO:0042026;protein refolding;0.0231359814519449!GO:0008094;DNA-dependent ATPase activity;0.0235078974255468!GO:0005637;nuclear inner membrane;0.0235078974255468!GO:0006644;phospholipid metabolic process;0.0236529061459302!GO:0006839;mitochondrial transport;0.023920852159342!GO:0046474;glycerophospholipid biosynthetic process;0.0243414028698097!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.0247153515820973!GO:0046588;negative regulation of calcium-dependent cell-cell adhesion;0.0251894300067224!GO:0046586;regulation of calcium-dependent cell-cell adhesion;0.0251894300067224!GO:0007004;telomere maintenance via telomerase;0.025526818281532!GO:0051087;chaperone binding;0.0257190451625199!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0257190451625199!GO:0009165;nucleotide biosynthetic process;0.0257244871841679!GO:0045576;mast cell activation;0.0262997894099117!GO:0000314;organellar small ribosomal subunit;0.0266552283071875!GO:0005763;mitochondrial small ribosomal subunit;0.0266552283071875!GO:0005484;SNAP receptor activity;0.0270714327538369!GO:0030258;lipid modification;0.027268283508922!GO:0002761;regulation of myeloid leukocyte differentiation;0.0273358666013614!GO:0042770;DNA damage response, signal transduction;0.0279079679497169!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0279680319233454!GO:0007010;cytoskeleton organization and biogenesis;0.028437594586933!GO:0031901;early endosome membrane;0.0285038902967513!GO:0000726;non-recombinational repair;0.0286296911285691!GO:0003725;double-stranded RNA binding;0.0287244968400837!GO:0045926;negative regulation of growth;0.0288117488387689!GO:0016311;dephosphorylation;0.0291248117301195!GO:0051053;negative regulation of DNA metabolic process;0.0295411745641017!GO:0006406;mRNA export from nucleus;0.0296027639053851!GO:0005684;U2-dependent spliceosome;0.0296027639053851!GO:0051059;NF-kappaB binding;0.0300648968775796!GO:0045893;positive regulation of transcription, DNA-dependent;0.0303806593862391!GO:0005876;spindle microtubule;0.0304970057503432!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0305470976015336!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0305470976015336!GO:0042802;identical protein binding;0.0315134804695539!GO:0019843;rRNA binding;0.0322604466737823!GO:0051540;metal cluster binding;0.0322604466737823!GO:0051536;iron-sulfur cluster binding;0.0322604466737823!GO:0004003;ATP-dependent DNA helicase activity;0.032297811055027!GO:0044437;vacuolar part;0.0329370227793804!GO:0005020;stem cell factor receptor activity;0.0332021366604118!GO:0000228;nuclear chromosome;0.0335080783529527!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0339358602342329!GO:0008624;induction of apoptosis by extracellular signals;0.0339958793375982!GO:0004576;oligosaccharyl transferase activity;0.0340203723614245!GO:0032508;DNA duplex unwinding;0.0344929672927987!GO:0032392;DNA geometric change;0.0344929672927987!GO:0016601;Rac protein signal transduction;0.0345490731878112!GO:0008632;apoptotic program;0.0354794984911327!GO:0044255;cellular lipid metabolic process;0.0355595840685234!GO:0005869;dynactin complex;0.036190890788365!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0363988571594602!GO:0045892;negative regulation of transcription, DNA-dependent;0.0372540902585063!GO:0000922;spindle pole;0.0376554820026998!GO:0046488;phosphatidylinositol metabolic process;0.0379050823030324!GO:0000781;chromosome, telomeric region;0.0389337196141084!GO:0006266;DNA ligation;0.0391044784651292!GO:0016455;RNA polymerase II transcription mediator activity;0.0398542438346333!GO:0000059;protein import into nucleus, docking;0.0406094663492029!GO:0051098;regulation of binding;0.0407145895167776!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0407520004387959!GO:0008333;endosome to lysosome transport;0.0409639524035728!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0409825098953596!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0409825098953596!GO:0006400;tRNA modification;0.0413073216665341!GO:0051539;4 iron, 4 sulfur cluster binding;0.0415402268618455!GO:0005765;lysosomal membrane;0.0415931611388917!GO:0030133;transport vesicle;0.041910638275215!GO:0005832;chaperonin-containing T-complex;0.0419169666536481!GO:0004278;granzyme B activity;0.0427821911918265!GO:0051287;NAD binding;0.0436273476724726!GO:0045545;syndecan binding;0.0436273476724726!GO:0005895;interleukin-5 receptor complex;0.0436273476724726!GO:0009112;nucleobase metabolic process;0.0437651404655224!GO:0030041;actin filament polymerization;0.044582704892666!GO:0008180;signalosome;0.0446400576815992!GO:0009066;aspartate family amino acid metabolic process;0.0457202814212723!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.0461219337911217!GO:0046854;phosphoinositide phosphorylation;0.0461219337911217!GO:0005083;small GTPase regulator activity;0.0461341789199224!GO:0003746;translation elongation factor activity;0.0461701646703682!GO:0031124;mRNA 3'-end processing;0.0462670476749416!GO:0006338;chromatin remodeling;0.0476779569950595!GO:0003702;RNA polymerase II transcription factor activity;0.0489064356987881!GO:0005129;granulocyte macrophage colony-stimulating factor receptor binding;0.0491717000974653!GO:0046479;glycosphingolipid catabolic process;0.0492924401851576!GO:0030149;sphingolipid catabolic process;0.0499105571051695!GO:0009451;RNA modification;0.0499854054462792!GO:0035034;histone acetyltransferase regulator activity;0.0499854054462792 | ||
|sample_id=11487 | |sample_id=11487 | ||
| Line 77: | Line 106: | ||
|sample_tissue=skin | |sample_tissue=skin | ||
|top_motifs=RXR{A,B,G}_{NR1H2,PPAR}dimers:3.47795733326;ALX1:3.16438087101;GATA6:2.74259791976;CRX:2.39092045629;RUNX1..3:2.38412115765;FOXN1:2.25551021196;ATF5_CREB3:2.11177365402;ELF1,2,4:1.98957347629;TLX2:1.96937766392;EGR1..3:1.80950429613;MAFB:1.80722574628;ATF4:1.7126017944;ELK1,4_GABP{A,B1}:1.69690976465;FOXA2:1.63988986944;HSF1,2:1.51900696482;NKX2-2,8:1.46715776735;STAT1,3:1.4626118702;NFE2L1:1.42279421598;HOXA9_MEIS1:1.40226878917;NFATC1..3:1.40063759795;HBP1_HMGB_SSRP1_UBTF:1.3242963349;CREB1:1.31483838386;ESRRA:1.28358720148;MYB:1.27507244588;SPI1:1.23646958697;HMGA1,2:1.20679884587;YY1:1.20323377428;TGIF1:1.1979608497;IKZF2:1.19367559878;RREB1:1.17910415242;SPIB:1.10800664972;HOX{A5,B5}:1.07152928378;FOXP3:1.06368848257;CUX2:1.04842577828;NKX3-2:1.04413323035;PAX5:1.03461508052;MYFfamily:1.00720718975;FOSL2:0.981439840924;DMAP1_NCOR{1,2}_SMARC:0.978531534984;PAX8:0.97423991615;PAX2:0.952176649031;RXR{A,B,G}:0.877189604217;DBP:0.871097837659;SMAD1..7,9:0.864738988527;NKX2-1,4:0.840600885031;SOX17:0.824944957713;NFY{A,B,C}:0.824503261801;ARID5B:0.821315749971;JUN:0.813563688052;PAX6:0.799315757192;SREBF1,2:0.780023806735;RORA:0.755482363481;ESR1:0.727916059434;IRF1,2:0.690613334137;ATF2:0.672273068778;BPTF:0.621164504683;NANOG{mouse}:0.603542303661;ATF6:0.58263482847;XBP1:0.564027131984;RXRA_VDR{dimer}:0.553450643317;ETS1,2:0.550969380799;POU3F1..4:0.510241548296;HMX1:0.470046699815;HLF:0.458883284786;NFKB1_REL_RELA:0.449665669588;PRRX1,2:0.448346109904;TFAP4:0.444233285731;PPARG:0.433152199616;E2F1..5:0.431126646492;GZF1:0.410430612684;MZF1:0.386817365849;NFE2:0.385645344693;ONECUT1,2:0.375788624382;MYOD1:0.349197717023;PRDM1:0.345737920555;ZNF148:0.340044670649;RFX2..5_RFXANK_RFXAP:0.33806383059;NR6A1:0.326123635417;SPZ1:0.266369321943;EN1,2:0.25578007523;GLI1..3:0.248094434853;ZBTB16:0.241079721914;PAX3,7:0.235780397724;NR3C1:0.235763713445;ZBTB6:0.220444904383;BACH2:0.192401027273;TBX4,5:0.157951146476;FOS_FOS{B,L1}_JUN{B,D}:0.157013357804;NRF1:0.116593815236;STAT2,4,6:0.0368494043358;HNF4A_NR2F1,2:0.034561065822;FOX{I1,J2}:0.0250610477062;POU1F1:-0.00159618433005;AIRE:-0.00442197923209;AHR_ARNT_ARNT2:-0.0233110200055;TFAP2{A,C}:-0.0239975177583;PBX1:-0.0258715378309;SOX{8,9,10}:-0.0508437869728;EP300:-0.0837900213766;ZIC1..3:-0.0845033673486;POU5F1:-0.108622662397;TFCP2:-0.11821709016;NHLH1,2:-0.146962340582;IRF7:-0.166554681113;FOXD3:-0.215920027401;T:-0.220313375361;POU6F1:-0.221697544175;ZNF384:-0.22359476684;ADNP_IRX_SIX_ZHX:-0.244464865945;ZNF238:-0.267339535345;ZNF143:-0.283750215233;NFE2L2:-0.289086986572;bHLH_family:-0.302068231833;CDX1,2,4:-0.315428493052;AR:-0.315948025772;HIF1A:-0.325383791772;PATZ1:-0.330448894672;REST:-0.332412248666;MEF2{A,B,C,D}:-0.336348382208;SOX2:-0.363676527804;ZFP161:-0.364815077699;HNF1A:-0.36765628878;SRF:-0.386715921587;LEF1_TCF7_TCF7L1,2:-0.397376329352;TOPORS:-0.409641805606;SNAI1..3:-0.414647283567;HAND1,2:-0.431671703905;TFDP1:-0.451669211332;OCT4_SOX2{dimer}:-0.515752279054;MED-1{core}:-0.553925670789;STAT5{A,B}:-0.576121954666;MAZ:-0.600393053432;EVI1:-0.600485166732;NR1H4:-0.603483563587;FOXP1:-0.624479280183;GATA4:-0.62464840503;FOXM1:-0.639482595237;BREu{core}:-0.650190560215;PAX4:-0.657079408786;NR5A1,2:-0.67549486009;TP53:-0.701962873982;NKX3-1:-0.707337261607;NANOG:-0.714444787404;TEF:-0.716104875073;FOX{F1,F2,J1}:-0.751639269044;HOX{A4,D4}:-0.800073590439;MTE{core}:-0.826967981965;LHX3,4:-0.838653256957;TLX1..3_NFIC{dimer}:-0.845413286137;PAX1,9:-0.858721021778;GTF2I:-0.864897830354;HIC1:-0.892291286402;IKZF1:-0.901093172335;UFEwm:-0.913324584728;FOXQ1:-0.913770798742;RBPJ:-0.943298083898;SOX5:-0.943327293424;RFX1:-0.9459962099;KLF4:-0.983262670054;CEBPA,B_DDIT3:-0.992510143623;NFIX:-1.00611321725;TBP:-1.02908278949;POU2F1..3:-1.04761328768;MTF1:-1.06101599478;VSX1,2:-1.08516107084;ZEB1:-1.08628659569;TEAD1:-1.09431570773;FOXO1,3,4:-1.10324917258;TFAP2B:-1.26500741176;TAL1_TCF{3,4,12}:-1.2673809508;HOX{A6,A7,B6,B7}:-1.28691500328;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.32118837807;ALX4:-1.33958159107;NKX6-1,2:-1.34694430319;XCPE1{core}:-1.3928143387;NKX2-3_NKX2-5:-1.40430657071;GFI1:-1.52451048607;PDX1:-1.54675421899;LMO2:-1.5538184235;EBF1:-1.65134224364;FOX{D1,D2}:-1.66083147574;NFIL3:-1.76471736381;ZNF423:-1.77685745507;MYBL2:-1.78913975075;SP1:-1.87243626037;CDC5L:-1.87795579405;GFI1B:-1.89661805613;GCM1,2:-1.98143647361;HES1:-2.2078238826;PITX1..3:-2.26291562592;FOXL1:-2.85373287017;GTF2A1,2:-3.3298923791 | |top_motifs=RXR{A,B,G}_{NR1H2,PPAR}dimers:3.47795733326;ALX1:3.16438087101;GATA6:2.74259791976;CRX:2.39092045629;RUNX1..3:2.38412115765;FOXN1:2.25551021196;ATF5_CREB3:2.11177365402;ELF1,2,4:1.98957347629;TLX2:1.96937766392;EGR1..3:1.80950429613;MAFB:1.80722574628;ATF4:1.7126017944;ELK1,4_GABP{A,B1}:1.69690976465;FOXA2:1.63988986944;HSF1,2:1.51900696482;NKX2-2,8:1.46715776735;STAT1,3:1.4626118702;NFE2L1:1.42279421598;HOXA9_MEIS1:1.40226878917;NFATC1..3:1.40063759795;HBP1_HMGB_SSRP1_UBTF:1.3242963349;CREB1:1.31483838386;ESRRA:1.28358720148;MYB:1.27507244588;SPI1:1.23646958697;HMGA1,2:1.20679884587;YY1:1.20323377428;TGIF1:1.1979608497;IKZF2:1.19367559878;RREB1:1.17910415242;SPIB:1.10800664972;HOX{A5,B5}:1.07152928378;FOXP3:1.06368848257;CUX2:1.04842577828;NKX3-2:1.04413323035;PAX5:1.03461508052;MYFfamily:1.00720718975;FOSL2:0.981439840924;DMAP1_NCOR{1,2}_SMARC:0.978531534984;PAX8:0.97423991615;PAX2:0.952176649031;RXR{A,B,G}:0.877189604217;DBP:0.871097837659;SMAD1..7,9:0.864738988527;NKX2-1,4:0.840600885031;SOX17:0.824944957713;NFY{A,B,C}:0.824503261801;ARID5B:0.821315749971;JUN:0.813563688052;PAX6:0.799315757192;SREBF1,2:0.780023806735;RORA:0.755482363481;ESR1:0.727916059434;IRF1,2:0.690613334137;ATF2:0.672273068778;BPTF:0.621164504683;NANOG{mouse}:0.603542303661;ATF6:0.58263482847;XBP1:0.564027131984;RXRA_VDR{dimer}:0.553450643317;ETS1,2:0.550969380799;POU3F1..4:0.510241548296;HMX1:0.470046699815;HLF:0.458883284786;NFKB1_REL_RELA:0.449665669588;PRRX1,2:0.448346109904;TFAP4:0.444233285731;PPARG:0.433152199616;E2F1..5:0.431126646492;GZF1:0.410430612684;MZF1:0.386817365849;NFE2:0.385645344693;ONECUT1,2:0.375788624382;MYOD1:0.349197717023;PRDM1:0.345737920555;ZNF148:0.340044670649;RFX2..5_RFXANK_RFXAP:0.33806383059;NR6A1:0.326123635417;SPZ1:0.266369321943;EN1,2:0.25578007523;GLI1..3:0.248094434853;ZBTB16:0.241079721914;PAX3,7:0.235780397724;NR3C1:0.235763713445;ZBTB6:0.220444904383;BACH2:0.192401027273;TBX4,5:0.157951146476;FOS_FOS{B,L1}_JUN{B,D}:0.157013357804;NRF1:0.116593815236;STAT2,4,6:0.0368494043358;HNF4A_NR2F1,2:0.034561065822;FOX{I1,J2}:0.0250610477062;POU1F1:-0.00159618433005;AIRE:-0.00442197923209;AHR_ARNT_ARNT2:-0.0233110200055;TFAP2{A,C}:-0.0239975177583;PBX1:-0.0258715378309;SOX{8,9,10}:-0.0508437869728;EP300:-0.0837900213766;ZIC1..3:-0.0845033673486;POU5F1:-0.108622662397;TFCP2:-0.11821709016;NHLH1,2:-0.146962340582;IRF7:-0.166554681113;FOXD3:-0.215920027401;T:-0.220313375361;POU6F1:-0.221697544175;ZNF384:-0.22359476684;ADNP_IRX_SIX_ZHX:-0.244464865945;ZNF238:-0.267339535345;ZNF143:-0.283750215233;NFE2L2:-0.289086986572;bHLH_family:-0.302068231833;CDX1,2,4:-0.315428493052;AR:-0.315948025772;HIF1A:-0.325383791772;PATZ1:-0.330448894672;REST:-0.332412248666;MEF2{A,B,C,D}:-0.336348382208;SOX2:-0.363676527804;ZFP161:-0.364815077699;HNF1A:-0.36765628878;SRF:-0.386715921587;LEF1_TCF7_TCF7L1,2:-0.397376329352;TOPORS:-0.409641805606;SNAI1..3:-0.414647283567;HAND1,2:-0.431671703905;TFDP1:-0.451669211332;OCT4_SOX2{dimer}:-0.515752279054;MED-1{core}:-0.553925670789;STAT5{A,B}:-0.576121954666;MAZ:-0.600393053432;EVI1:-0.600485166732;NR1H4:-0.603483563587;FOXP1:-0.624479280183;GATA4:-0.62464840503;FOXM1:-0.639482595237;BREu{core}:-0.650190560215;PAX4:-0.657079408786;NR5A1,2:-0.67549486009;TP53:-0.701962873982;NKX3-1:-0.707337261607;NANOG:-0.714444787404;TEF:-0.716104875073;FOX{F1,F2,J1}:-0.751639269044;HOX{A4,D4}:-0.800073590439;MTE{core}:-0.826967981965;LHX3,4:-0.838653256957;TLX1..3_NFIC{dimer}:-0.845413286137;PAX1,9:-0.858721021778;GTF2I:-0.864897830354;HIC1:-0.892291286402;IKZF1:-0.901093172335;UFEwm:-0.913324584728;FOXQ1:-0.913770798742;RBPJ:-0.943298083898;SOX5:-0.943327293424;RFX1:-0.9459962099;KLF4:-0.983262670054;CEBPA,B_DDIT3:-0.992510143623;NFIX:-1.00611321725;TBP:-1.02908278949;POU2F1..3:-1.04761328768;MTF1:-1.06101599478;VSX1,2:-1.08516107084;ZEB1:-1.08628659569;TEAD1:-1.09431570773;FOXO1,3,4:-1.10324917258;TFAP2B:-1.26500741176;TAL1_TCF{3,4,12}:-1.2673809508;HOX{A6,A7,B6,B7}:-1.28691500328;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.32118837807;ALX4:-1.33958159107;NKX6-1,2:-1.34694430319;XCPE1{core}:-1.3928143387;NKX2-3_NKX2-5:-1.40430657071;GFI1:-1.52451048607;PDX1:-1.54675421899;LMO2:-1.5538184235;EBF1:-1.65134224364;FOX{D1,D2}:-1.66083147574;NFIL3:-1.76471736381;ZNF423:-1.77685745507;MYBL2:-1.78913975075;SP1:-1.87243626037;CDC5L:-1.87795579405;GFI1B:-1.89661805613;GCM1,2:-1.98143647361;HES1:-2.2078238826;PITX1..3:-2.26291562592;FOXL1:-2.85373287017;GTF2A1,2:-3.3298923791 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11487-119E2;search_select_hide=table117:FF:11487-119E2 | |||
}} | }} | ||
Latest revision as of 18:04, 4 June 2020
| Name: | Mast cell - stimulated, donor1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11073 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| HumanCAGEScan Download raw sequence, BAM & CTSS | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| RNA-Seq Accession numbers | |||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11073
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11073
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.822 |
| 10 | 10 | 0.0826 |
| 100 | 100 | 0.0362 |
| 101 | 101 | 0.623 |
| 102 | 102 | 0.813 |
| 103 | 103 | 0.116 |
| 104 | 104 | 0.87 |
| 105 | 105 | 0.317 |
| 106 | 106 | 0.478 |
| 107 | 107 | 0.226 |
| 108 | 108 | 0.203 |
| 109 | 109 | 0.243 |
| 11 | 11 | 0.613 |
| 110 | 110 | 0.495 |
| 111 | 111 | 0.968 |
| 112 | 112 | 0.237 |
| 113 | 113 | 0.167 |
| 114 | 114 | 0.165 |
| 115 | 115 | 0.66 |
| 116 | 116 | 0.262 |
| 117 | 117 | 0.0296 |
| 118 | 118 | 0.512 |
| 119 | 119 | 0.532 |
| 12 | 12 | 0.765 |
| 120 | 120 | 0.571 |
| 121 | 121 | 0.162 |
| 122 | 122 | 0.379 |
| 123 | 123 | 0.225 |
| 124 | 124 | 0.588 |
| 125 | 125 | 0.614 |
| 126 | 126 | 0.511 |
| 127 | 127 | 0.745 |
| 128 | 128 | 0.362 |
| 129 | 129 | 0.3 |
| 13 | 13 | 0.318 |
| 130 | 130 | 0.358 |
| 131 | 131 | 0.728 |
| 132 | 132 | 0.136 |
| 133 | 133 | 0.26 |
| 134 | 134 | 0.323 |
| 135 | 135 | 0.628 |
| 136 | 136 | 0.0649 |
| 137 | 137 | 0.0697 |
| 138 | 138 | 0.643 |
| 139 | 139 | 0.459 |
| 14 | 14 | 0.425 |
| 140 | 140 | 0.631 |
| 141 | 141 | 0.615 |
| 142 | 142 | 0.463 |
| 143 | 143 | 0.105 |
| 144 | 144 | 0.46 |
| 145 | 145 | 0.845 |
| 146 | 146 | 0.47 |
| 147 | 147 | 0.142 |
| 148 | 148 | 0.0379 |
| 149 | 149 | 0.0836 |
| 15 | 15 | 0.219 |
| 150 | 150 | 0.459 |
| 151 | 151 | 0.329 |
| 152 | 152 | 0.853 |
| 153 | 153 | 0.328 |
| 154 | 154 | 0.601 |
| 155 | 155 | 0.0883 |
| 156 | 156 | 0.794 |
| 157 | 157 | 0.99 |
| 158 | 158 | 0.00329 |
| 159 | 159 | 0.267 |
| 16 | 16 | 0.683 |
| 160 | 160 | 0.0193 |
| 161 | 161 | 0.586 |
| 162 | 162 | 0.0205 |
| 163 | 163 | 0.872 |
| 164 | 164 | 0.748 |
| 165 | 165 | 0.967 |
| 166 | 166 | 0.308 |
| 167 | 167 | 0.739 |
| 168 | 168 | 0.874 |
| 169 | 169 | 0.412 |
| 17 | 17 | 0.889 |
| 18 | 18 | 0.988 |
| 19 | 19 | 0.743 |
| 2 | 2 | 0.431 |
| 20 | 20 | 0.466 |
| 21 | 21 | 0.0432 |
| 22 | 22 | 0.456 |
| 23 | 23 | 0.473 |
| 24 | 24 | 0.0982 |
| 25 | 25 | 0.11 |
| 26 | 26 | 0.255 |
| 27 | 27 | 0.426 |
| 28 | 28 | 0.119 |
| 29 | 29 | 0.514 |
| 3 | 3 | 0.453 |
| 30 | 30 | 0.232 |
| 31 | 31 | 0.491 |
| 32 | 32 | 0.0186 |
| 33 | 33 | 0.346 |
| 34 | 34 | 0.325 |
| 35 | 35 | 0.732 |
| 36 | 36 | 0.934 |
| 37 | 37 | 0.146 |
| 38 | 38 | 0.845 |
| 39 | 39 | 0.258 |
| 4 | 4 | 0.847 |
| 40 | 40 | 0.00268 |
| 41 | 41 | 0.586 |
| 42 | 42 | 0.57 |
| 43 | 43 | 0.465 |
| 44 | 44 | 0.849 |
| 45 | 45 | 0.545 |
| 46 | 46 | 0.853 |
| 47 | 47 | 0.934 |
| 48 | 48 | 0.615 |
| 49 | 49 | 0.58 |
| 5 | 5 | 0.799 |
| 50 | 50 | 0.403 |
| 51 | 51 | 0.9 |
| 52 | 52 | 0.856 |
| 53 | 53 | 0.851 |
| 54 | 54 | 0.649 |
| 55 | 55 | 0.915 |
| 56 | 56 | 0.71 |
| 57 | 57 | 0.419 |
| 58 | 58 | 0.0813 |
| 59 | 59 | 0.88 |
| 6 | 6 | 0.806 |
| 60 | 60 | 0.733 |
| 61 | 61 | 0.37 |
| 62 | 62 | 0.11 |
| 63 | 63 | 0.0808 |
| 64 | 64 | 0.479 |
| 65 | 65 | 0.282 |
| 66 | 66 | 0.13 |
| 67 | 67 | 0.804 |
| 68 | 68 | 0.405 |
| 69 | 69 | 0.442 |
| 7 | 7 | 0.514 |
| 70 | 70 | 0.561 |
| 71 | 71 | 0.425 |
| 72 | 72 | 0.187 |
| 73 | 73 | 0.602 |
| 74 | 74 | 0.455 |
| 75 | 75 | 0.0856 |
| 76 | 76 | 0.724 |
| 77 | 77 | 0.0487 |
| 78 | 78 | 0.0363 |
| 79 | 79 | 0.653 |
| 8 | 8 | 0.323 |
| 80 | 80 | 0.465 |
| 81 | 81 | 0.525 |
| 82 | 82 | 0.932 |
| 83 | 83 | 0.367 |
| 84 | 84 | 0.847 |
| 85 | 85 | 0.212 |
| 86 | 86 | 0.224 |
| 87 | 87 | 0.925 |
| 88 | 88 | 0.142 |
| 89 | 89 | 0.373 |
| 9 | 9 | 0.888 |
| 90 | 90 | 0.209 |
| 91 | 91 | 0.508 |
| 92 | 92 | 0.821 |
| 93 | 93 | 0.44 |
| 94 | 94 | 0.536 |
| 95 | 95 | 0.0626 |
| 96 | 96 | 0.341 |
| 97 | 97 | 0.854 |
| 98 | 98 | 0.131 |
| 99 | 99 | 0.00333 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11073
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0000262 mast cell- stimulated sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0000151 (secretory cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0002274 (histamine secreting cell)
0000219 (motile cell)
0000163 (endocrine cell)
0000457 (biogenic amine secreting cell)
0000738 (leukocyte)
0000255 (eukaryotic cell)
0000097 (mast cell)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000260 (mast cell sample)
0000262 (mast cell- stimulated sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
