FF:11934-125I8: Difference between revisions
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{{f5samples | {{f5samples | ||
|DRA_sample_Accession=CAGE@SAMD00005868 | |||
|accession_numbers=CAGE;DRX008385;DRR009257;DRZ000682;DRZ002067;DRZ012032;DRZ013417 | |||
|ancestors_in_anatomy_facet= | |ancestors_in_anatomy_facet= | ||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet=CL:0000000,CL:0000197,CL:0000003,CL:0000548,CL:0000075,CL:0000066,CL:0002371,CL:0000710,CL:0000255,CL:0002077,CL:0000098,CL:0002167 | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0200002 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Olfactory%2520epithelial%2520cells%252c%2520donor2.CNhs13817.11934-125I8.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Olfactory%2520epithelial%2520cells%252c%2520donor2.CNhs13817.11934-125I8.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Olfactory%2520epithelial%2520cells%252c%2520donor2.CNhs13817.11934-125I8.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Olfactory%2520epithelial%2520cells%252c%2520donor2.CNhs13817.11934-125I8.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Olfactory%2520epithelial%2520cells%252c%2520donor2.CNhs13817.11934-125I8.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11934-125I8 | |id=FF:11934-125I8 | ||
|is_a=FF:0000002;;FF:0000210;;FF:0200002 | |is_a=FF:0000002;;FF:0000210;;FF:0200002 | ||
|is_obsolete= | |||
|library_id=CNhs13817 | |||
|library_id_phase_based=2:CNhs13817 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11934 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11934 | |||
|name=Olfactory epithelial cells, donor2 | |name=Olfactory epithelial cells, donor2 | ||
|namespace= | |namespace= | ||
| Line 44: | Line 63: | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq= | |profile_srnaseq= | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,0.116636371515404,0,0.0387286100230172,-0.165434140498893,0,0,0,0,0,0,0,0,0,0,0,0.27695440160179,0,0.452336741774854,0,0,0,0,0,-0.0266544788627149,0,0,0.100982250377235,0,0,0,0,0,0,0,0,0,0,0,0,-0.0592456135466939,0.0525159241405607,0,0,0,0,0,0,0,0.0688797604133925,0,0,0,0,0,0.0587343008565009,0.132534392409199,0.179962040359185,0,0,0.0888459358393565,0,0,0,0,0,0,0,0,0.132534392409199,0,0,0,0,0,0,0,0,0,0,0,0.132534392409199,0,0,0,0.0202944570243722,0.116969420078049,0,0.0116549086154584,-0.0584468268118252,0.209019456907584,0.0356517087026713,0.642479437076029,0,0,-0.0267319338323638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0301063977178615,0,0,0,0,-0.080543196062872,0,0,0,0,0,0 | |||
|repeat_enrich_byname=0,0,0,0,-0.0267319338323638,0,0,0.233938840156098,0,0,0,0.233938840156098,0.132534392409199,0.642479437076029,0,0,-0.060989312233111,0,-0.474086218752008,-0.0722117251181293,0.0662671962045995,0,0.0835264038324304,0,0,0,0.0356517087026713,0.132534392409199,0,0.0713034174053426,0.0713034174053426,0,0.514359570123464,0,-0.0504125515893149,0,0,0,0,0.228976559388847,0.13924221921839,0,0.266202231923379,0.591436951830143,0,0.0547703569070941,0,0,0.271308041291979,0,0.0116549086154584,0.36199428179338,0.463183083234582,0.267906135163792,0.00979290328399923,0,0,0,-0.0632265191026891,0.0999906935008399,0,0,0.273518959358756,-0.11508242235606,0,0,1.31618583371339,0,0.19273046449601,0.207729494172973,0,0.175314715438475,0,0,0,0,0,0,0,0,0.233938840156098,0,0,0.308020143628398,0.238438275445158,0.0627622142802469,0.0713034174053426,0.132534392409199,0.0469954386709712,0.0060679205030516,0,0,0.0984042886182347,0.0823580431238726,-0.068343913417118,-0.427106799903228,0,-0.302389727009913,0.0488033353457124,-0.447576692028853,0.0418196833547304,0.168688892845393,0.162008300058886,0,0.0202944570243722,-0.0490223452042005,0.0718855345235064,0.106510709969567,0,-0.0180264254499787,0.0684282566459669,0,0,0.156429913676794,0.0498557556964029,0,0,0.115545037646508,-0.059733176387275,0.170887149177985,0.051852989506594,0.024973218709699,-0.203335524746694,0.188692708627238,0.167023223616803,0.0259360727123594,0.29420346633905,0,0.316090742216531,-0.00683345509961653,-0.00284649169914035,-0.0211695415649197,-0.118737792435107,0.00506664636816028,-0.0122870172361791,0.0641901313318309,0.0713034174053426,0.0197179494194384,0.0914838048647597,0,0.0972180535883495,0.247927660953274,0,0.0713034174053426,0,0,0,-0.255719051316027,0.00432838756993514,0.0832351806609864,0,-0.129048343053728,0,-0.158808879551692,0,-0.201465236322097,0.130944504144396,-0.021119750759502,0.114318035018767,0,-0.085861105920213,0.415766907634818,-0.0224986917473164,0.285504521405968,-0.0584468268118252,0.198641219152643,-0.0159358168157295,-0.0088964835420009,0.341073025448583,0,0.85885939970111,0,0.10514886363706,0.267488100554873,0.0278753375194257,-0.0510782750183457,0.186189563052453,-0.091131104981176,0,0.0354488786765639,0,-0.35888340284452,0.152011083461356,-0.439289374580686,0.074003818766423,0,0.036330908053722,0.415664154146897,0.0713034174053426,0,0,0,-0.0790636659292967,0.025126745163967,0.122389953048043,-0.000512255878299506,-0.00204536109615905,0.110763643844156,0,0,0.251400720503737,0.285606690057962,0.0713034174053426,-0.0044750312969373,-0.257212894604663,0.118606670481255,-0.0446676560295914,0.186189563052453,0,0.0771223736838248,0,0.351990019608733,0.209071479115802,0.0096989980649376,-0.122694943215062,-0.253326341486756,0,-0.108622809454255,0,0,0.319560614778396,0.0713034174053426,0.324917123402129,0,0,-0.183614100394224,0.160326288611658,0,0,0.0713034174053426,0.112296283444958,0.0713034174053426,0.0123469064199865,0,0,0.0356517087026713,0,0.010711019539745,0.438335919371415,-0.168643767163995,0.132534392409199,0.255410593465762,0,0.186189563052453,0,0,0,0,0,0,1.09155937021533,0.00301015568743784,-0.12301741567642,0.0930947815262265,0,0,0,0.444057810354036,0.0737178395070666,0.132534392409199,-0.0605592890922891,0,0,0,0,-0.0148375723838687,0,0,0.0662671962045995,0,0.0135729603516786,0.198745591256628,0,0,0,0,0,0,0.565426872124127,0.0590165863918378,-0.283407992450175,0,0.186189563052453,0.566269431359768,0,0.137535247122129,-0.0815818795468414,0.0111969540705185,0.378942579028503,0.447405015511134,0.133867143587844,0,0.0713034174053426,-0.190043714384545,0,0.142225177435189,0.182153045336479,0.101561570232425,0,0.090365516110029,0,0,0,0,0,0,-0.0817801199905566,0.116969420078049,0,0,0,0,0,0,0,0,0,0,-0.0304895564795646,0.0403103357506887,0.132534392409199,0,0,0,0,0,0,0.315220622057545,0.30305228263188,0.0356517087026713,0,0.0356517087026713,0,0,0.132534392409199,0,0,0.279787992829318,0,0,0,0,0,0.179962040359185,0,0,0,0,-0.330868280997786,0,0,0.0387286100230172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11061975412065,-0.0471800425645776,0,0,0,0,0,0,0,0.24624942961626,0,0,0,0,1.81936884672189,0,0,0,0.416286343033194,0,0.116636371515404,0,0,0.316090742216531,0,0,0,0,0.0356517087026713,0,0,0.27695440160179,0,0,0,0,0,0,0,0.559184803446865,0,0,0.70336742780724,0.105250597113729,0,0.132534392409199,0,0,0.207831940439848,0,0,0,0,0,0,0.0856289960495215,0.132534392409199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0930947815262265,0.133168973424508,0,0,0,0,0,0,0,-0.0266544788627149,0,0,-0.0563811010978549,0,0,0,0,0,0,0.0085457312524515,0.1799714377222,0.0542849858956364,0,0,0,0.10365979862581,0,0,0.0449851363165759,0.132534392409199,0.119412175633552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.452336741774854,0,0,0,0,0,0,0,0,0,0,0,0,0.222357225058398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0947351269534813,0.0713034174053426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0525159241405607,0,0,0,0.0638681719447467,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| |||
|rna_box=125 | |rna_box=125 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=8.091 | |rna_weight_ug=8.091 | ||
|sample_age=66 | |sample_age=66 | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity=caucasian | |sample_ethnicity=caucasian | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;7.02648802801516e-218!GO:0005737;cytoplasm;7.2845409842868e-184!GO:0043226;organelle;2.25779020826021e-169!GO:0043229;intracellular organelle;5.45710126358882e-169!GO:0043231;intracellular membrane-bound organelle;3.04222480916528e-164!GO:0043227;membrane-bound organelle;5.03843147983716e-164!GO:0044444;cytoplasmic part;3.59752922562961e-133!GO:0044422;organelle part;5.41696354297857e-124!GO:0044446;intracellular organelle part;1.59160957191837e-122!GO:0032991;macromolecular complex;2.04775126396159e-90!GO:0030529;ribonucleoprotein complex;8.95668996392572e-80!GO:0044238;primary metabolic process;2.84613702539087e-78!GO:0044237;cellular metabolic process;8.03857878178462e-78!GO:0005515;protein binding;3.80454205478995e-76!GO:0043170;macromolecule metabolic process;3.51754091200527e-73!GO:0005739;mitochondrion;2.02736466135222e-64!GO:0043233;organelle lumen;8.3010581365278e-62!GO:0031974;membrane-enclosed lumen;8.3010581365278e-62!GO:0003723;RNA binding;7.31267711466407e-59!GO:0005634;nucleus;2.67048770691154e-57!GO:0044428;nuclear part;2.73188189477761e-56!GO:0019538;protein metabolic process;6.57489691882379e-53!GO:0005840;ribosome;4.71335050490748e-51!GO:0006412;translation;7.51190491982402e-48!GO:0044260;cellular macromolecule metabolic process;2.40253759374579e-47!GO:0031090;organelle membrane;2.51997277761474e-47!GO:0044267;cellular protein metabolic process;1.16504161438175e-46!GO:0016043;cellular component organization and biogenesis;4.80813969483576e-46!GO:0003735;structural constituent of ribosome;1.60042471382101e-45!GO:0043234;protein complex;1.95790707340745e-45!GO:0044429;mitochondrial part;8.40332425530003e-44!GO:0015031;protein transport;3.10734063166895e-41!GO:0033036;macromolecule localization;1.90299753558526e-40!GO:0033279;ribosomal subunit;9.75829309749825e-40!GO:0005829;cytosol;1.59198712110219e-38!GO:0006396;RNA processing;1.62475659914324e-38!GO:0045184;establishment of protein localization;5.95733080407203e-38!GO:0008104;protein localization;1.14244754000174e-37!GO:0043283;biopolymer metabolic process;1.38014309170919e-37!GO:0009058;biosynthetic process;1.38014309170919e-37!GO:0031967;organelle envelope;5.51334373781459e-37!GO:0031975;envelope;1.00794282644996e-36!GO:0009059;macromolecule biosynthetic process;1.37452919108702e-36!GO:0044249;cellular biosynthetic process;2.17205968464949e-36!GO:0031981;nuclear lumen;3.67745219057701e-35!GO:0046907;intracellular transport;9.58750795053026e-34!GO:0010467;gene expression;1.25968498498633e-33!GO:0016071;mRNA metabolic process;8.03559361026669e-32!GO:0008380;RNA splicing;4.92690394338982e-31!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.31347913975512e-29!GO:0065003;macromolecular complex assembly;4.31879307523948e-29!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.81989939084716e-28!GO:0005740;mitochondrial envelope;2.14944548908146e-28!GO:0043228;non-membrane-bound organelle;3.16555694944502e-28!GO:0043232;intracellular non-membrane-bound organelle;3.16555694944502e-28!GO:0006886;intracellular protein transport;9.36843637568625e-28!GO:0006397;mRNA processing;1.55877139280307e-27!GO:0031966;mitochondrial membrane;2.94327857905111e-27!GO:0006996;organelle organization and biogenesis;3.72027179739752e-27!GO:0019866;organelle inner membrane;4.74889730293986e-27!GO:0022607;cellular component assembly;3.38203657534565e-26!GO:0005743;mitochondrial inner membrane;1.40793824084595e-25!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.74721959168373e-25!GO:0044445;cytosolic part;2.81962933154868e-23!GO:0006119;oxidative phosphorylation;1.65572713909289e-22!GO:0044455;mitochondrial membrane part;3.13010336096285e-22!GO:0005654;nucleoplasm;5.83698407085419e-22!GO:0005681;spliceosome;1.11265817384579e-21!GO:0015934;large ribosomal subunit;4.86427690434673e-21!GO:0051649;establishment of cellular localization;6.61876531673558e-21!GO:0051641;cellular localization;9.05903031179168e-21!GO:0000166;nucleotide binding;4.39925006898271e-20!GO:0015935;small ribosomal subunit;9.32237298405552e-20!GO:0006457;protein folding;5.2939113462431e-19!GO:0005783;endoplasmic reticulum;5.9722827054106e-19!GO:0008134;transcription factor binding;1.39899186159894e-18!GO:0012505;endomembrane system;1.45111532440936e-18!GO:0006259;DNA metabolic process;3.88899956041443e-18!GO:0048770;pigment granule;4.32608166117401e-18!GO:0042470;melanosome;4.32608166117401e-18!GO:0031980;mitochondrial lumen;7.88120409450966e-18!GO:0005759;mitochondrial matrix;7.88120409450966e-18!GO:0044451;nucleoplasm part;7.88120409450966e-18!GO:0005746;mitochondrial respiratory chain;1.5337911791448e-17!GO:0022618;protein-RNA complex assembly;2.07828325026457e-17!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.54828498323125e-17!GO:0016462;pyrophosphatase activity;2.68655587491147e-17!GO:0006512;ubiquitin cycle;3.23734655875109e-17!GO:0016817;hydrolase activity, acting on acid anhydrides;4.08377231965468e-17!GO:0016874;ligase activity;4.86999847343374e-17!GO:0017111;nucleoside-triphosphatase activity;1.23018687795081e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.08317446626462e-16!GO:0005794;Golgi apparatus;5.48697830330715e-16!GO:0044432;endoplasmic reticulum part;8.39349166125864e-16!GO:0003676;nucleic acid binding;9.0775132008344e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;9.10024408422808e-16!GO:0051186;cofactor metabolic process;1.34543533796212e-15!GO:0006511;ubiquitin-dependent protein catabolic process;1.56828162272478e-15!GO:0019941;modification-dependent protein catabolic process;1.56828162272478e-15!GO:0043632;modification-dependent macromolecule catabolic process;1.56828162272478e-15!GO:0050136;NADH dehydrogenase (quinone) activity;1.92133114118608e-15!GO:0003954;NADH dehydrogenase activity;1.92133114118608e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.92133114118608e-15!GO:0044257;cellular protein catabolic process;2.4860223617224e-15!GO:0048193;Golgi vesicle transport;3.08271578169797e-15!GO:0008135;translation factor activity, nucleic acid binding;3.59618331570561e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);4.89395824806597e-15!GO:0007049;cell cycle;5.91439652020119e-15!GO:0000502;proteasome complex (sensu Eukaryota);7.24037874860895e-15!GO:0043412;biopolymer modification;8.63738072458772e-15!GO:0044265;cellular macromolecule catabolic process;1.38815615937786e-14!GO:0005761;mitochondrial ribosome;2.07595100348051e-14!GO:0000313;organellar ribosome;2.07595100348051e-14!GO:0043285;biopolymer catabolic process;3.29888383185953e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.49419728895785e-14!GO:0032553;ribonucleotide binding;5.0578043853912e-14!GO:0032555;purine ribonucleotide binding;5.0578043853912e-14!GO:0017076;purine nucleotide binding;7.05903434397894e-14!GO:0005730;nucleolus;8.82116743615893e-14!GO:0006605;protein targeting;1.32404900592881e-13!GO:0030163;protein catabolic process;1.32404900592881e-13!GO:0030964;NADH dehydrogenase complex (quinone);1.33447044956437e-13!GO:0045271;respiratory chain complex I;1.33447044956437e-13!GO:0005747;mitochondrial respiratory chain complex I;1.33447044956437e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.43744044054206e-13!GO:0042775;organelle ATP synthesis coupled electron transport;1.6501725503434e-13!GO:0042773;ATP synthesis coupled electron transport;1.6501725503434e-13!GO:0006464;protein modification process;2.21726923944599e-13!GO:0016192;vesicle-mediated transport;3.6193443768252e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.02955253355677e-13!GO:0009057;macromolecule catabolic process;1.03141912243277e-12!GO:0051082;unfolded protein binding;1.15038621016558e-12!GO:0016070;RNA metabolic process;2.07238936447821e-12!GO:0006732;coenzyme metabolic process;3.60814608348692e-12!GO:0009055;electron carrier activity;3.84250811636635e-12!GO:0003712;transcription cofactor activity;4.00674989174875e-12!GO:0044248;cellular catabolic process;5.81016740661822e-12!GO:0003743;translation initiation factor activity;5.94947557467191e-12!GO:0012501;programmed cell death;1.41458522306761e-11!GO:0006413;translational initiation;1.66375967489222e-11!GO:0022402;cell cycle process;1.93667632855929e-11!GO:0043687;post-translational protein modification;2.03937668544659e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.13308244018693e-11!GO:0005793;ER-Golgi intermediate compartment;2.43573540273165e-11!GO:0005524;ATP binding;2.98337498730526e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;3.46914138931875e-11!GO:0000375;RNA splicing, via transesterification reactions;3.46914138931875e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.46914138931875e-11!GO:0006915;apoptosis;4.72314878227285e-11!GO:0032559;adenyl ribonucleotide binding;5.64475776342225e-11!GO:0005789;endoplasmic reticulum membrane;7.81301719445284e-11!GO:0008639;small protein conjugating enzyme activity;9.49145017303768e-11!GO:0030554;adenyl nucleotide binding;1.02634253785957e-10!GO:0008219;cell death;1.45484276232999e-10!GO:0016265;death;1.45484276232999e-10!GO:0004842;ubiquitin-protein ligase activity;1.77326184137557e-10!GO:0048523;negative regulation of cellular process;2.57233499264617e-10!GO:0008565;protein transporter activity;3.0575091297513e-10!GO:0019787;small conjugating protein ligase activity;3.25648815497799e-10!GO:0006446;regulation of translational initiation;3.72040231425473e-10!GO:0006974;response to DNA damage stimulus;3.7375328098135e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;3.87828896991037e-10!GO:0009259;ribonucleotide metabolic process;4.31177412486056e-10!GO:0006366;transcription from RNA polymerase II promoter;7.19708186409386e-10!GO:0006163;purine nucleotide metabolic process;8.28162685680582e-10!GO:0000278;mitotic cell cycle;9.10252003581811e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.01920293639509e-09!GO:0005635;nuclear envelope;1.40314944833802e-09!GO:0009150;purine ribonucleotide metabolic process;1.55013827183529e-09!GO:0006164;purine nucleotide biosynthetic process;1.82429383317587e-09!GO:0009260;ribonucleotide biosynthetic process;2.43605953886056e-09!GO:0009152;purine ribonucleotide biosynthetic process;3.26463884107012e-09!GO:0016604;nuclear body;3.27167632534973e-09!GO:0042254;ribosome biogenesis and assembly;3.39840068077421e-09!GO:0016881;acid-amino acid ligase activity;3.57854850087411e-09!GO:0006461;protein complex assembly;4.20216309338049e-09!GO:0030120;vesicle coat;7.77396858023567e-09!GO:0030662;coated vesicle membrane;7.77396858023567e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;7.82085821167642e-09!GO:0006913;nucleocytoplasmic transport;7.82085821167642e-09!GO:0000074;regulation of progression through cell cycle;9.39643529249225e-09!GO:0051726;regulation of cell cycle;1.08435055525755e-08!GO:0031965;nuclear membrane;1.18266947016496e-08!GO:0009199;ribonucleoside triphosphate metabolic process;1.32297186724695e-08!GO:0051169;nuclear transport;1.52200635900017e-08!GO:0048519;negative regulation of biological process;1.57596737584762e-08!GO:0044453;nuclear membrane part;1.73489462094853e-08!GO:0009060;aerobic respiration;1.80238484651321e-08!GO:0009141;nucleoside triphosphate metabolic process;2.00066544100074e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.06282152237438e-08!GO:0009144;purine nucleoside triphosphate metabolic process;2.06282152237438e-08!GO:0003924;GTPase activity;2.06282152237438e-08!GO:0045333;cellular respiration;2.22115801954228e-08!GO:0015986;ATP synthesis coupled proton transport;2.47110621247377e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.47110621247377e-08!GO:0009142;nucleoside triphosphate biosynthetic process;3.34080035728972e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.34080035728972e-08!GO:0015078;hydrogen ion transmembrane transporter activity;3.40275923053207e-08!GO:0048475;coated membrane;3.52494123932743e-08!GO:0030117;membrane coat;3.52494123932743e-08!GO:0051246;regulation of protein metabolic process;4.36158212284229e-08!GO:0005768;endosome;4.43102751540661e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;5.26060503207166e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;5.26060503207166e-08!GO:0006281;DNA repair;6.88830179458622e-08!GO:0042623;ATPase activity, coupled;1.04985922685227e-07!GO:0051188;cofactor biosynthetic process;1.08453300533285e-07!GO:0016887;ATPase activity;1.17952155987168e-07!GO:0006399;tRNA metabolic process;1.19119593023548e-07!GO:0006888;ER to Golgi vesicle-mediated transport;1.20357375782384e-07!GO:0050794;regulation of cellular process;1.28049326496815e-07!GO:0019829;cation-transporting ATPase activity;1.37273294686238e-07!GO:0006325;establishment and/or maintenance of chromatin architecture;1.37483358633055e-07!GO:0046034;ATP metabolic process;1.38889500742508e-07!GO:0016607;nuclear speck;1.44979209984804e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.51370754840737e-07!GO:0051276;chromosome organization and biogenesis;1.57927907642593e-07!GO:0017038;protein import;1.59515791377103e-07!GO:0009056;catabolic process;2.60055544529468e-07!GO:0006754;ATP biosynthetic process;2.9219766379658e-07!GO:0006753;nucleoside phosphate metabolic process;2.9219766379658e-07!GO:0043069;negative regulation of programmed cell death;2.92699475089348e-07!GO:0043067;regulation of programmed cell death;3.22496641240308e-07!GO:0005788;endoplasmic reticulum lumen;3.42693598165122e-07!GO:0044431;Golgi apparatus part;3.42693598165122e-07!GO:0006323;DNA packaging;3.7778573721115e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;3.92460744258466e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;4.00753669289227e-07!GO:0004812;aminoacyl-tRNA ligase activity;4.00753669289227e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;4.00753669289227e-07!GO:0042981;regulation of apoptosis;4.47401216554555e-07!GO:0006793;phosphorus metabolic process;4.49308011994767e-07!GO:0006796;phosphate metabolic process;4.49308011994767e-07!GO:0043066;negative regulation of apoptosis;4.69937622290638e-07!GO:0051187;cofactor catabolic process;4.71001679116194e-07!GO:0006916;anti-apoptosis;5.18985377355494e-07!GO:0016469;proton-transporting two-sector ATPase complex;5.25898196054821e-07!GO:0006099;tricarboxylic acid cycle;5.59285784059397e-07!GO:0046356;acetyl-CoA catabolic process;5.59285784059397e-07!GO:0009719;response to endogenous stimulus;5.63378887118688e-07!GO:0005694;chromosome;5.79445543454846e-07!GO:0032446;protein modification by small protein conjugation;6.98958684652462e-07!GO:0043038;amino acid activation;7.28911009585073e-07!GO:0006418;tRNA aminoacylation for protein translation;7.28911009585073e-07!GO:0043039;tRNA aminoacylation;7.28911009585073e-07!GO:0016567;protein ubiquitination;7.81974551748021e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;8.87834760457462e-07!GO:0008361;regulation of cell size;9.39244628589777e-07!GO:0000151;ubiquitin ligase complex;9.54056776371505e-07!GO:0009109;coenzyme catabolic process;9.65397639114952e-07!GO:0007005;mitochondrion organization and biogenesis;9.73650846035872e-07!GO:0065002;intracellular protein transport across a membrane;1.09909296976695e-06!GO:0005839;proteasome core complex (sensu Eukaryota);1.09909296976695e-06!GO:0016491;oxidoreductase activity;1.12235958081893e-06!GO:0016049;cell growth;1.17169309672404e-06!GO:0030532;small nuclear ribonucleoprotein complex;1.28331680551026e-06!GO:0045259;proton-transporting ATP synthase complex;1.62190018176068e-06!GO:0005643;nuclear pore;1.66906343103187e-06!GO:0016310;phosphorylation;1.74951871123914e-06!GO:0045786;negative regulation of progression through cell cycle;2.05568417844005e-06!GO:0004386;helicase activity;2.06805440785765e-06!GO:0005798;Golgi-associated vesicle;2.1212397613569e-06!GO:0016564;transcription repressor activity;2.27672206419664e-06!GO:0009117;nucleotide metabolic process;2.34862336019717e-06!GO:0006084;acetyl-CoA metabolic process;2.36352419080771e-06!GO:0003714;transcription corepressor activity;2.47913242247511e-06!GO:0065004;protein-DNA complex assembly;2.68721960215187e-06!GO:0022403;cell cycle phase;2.68721960215187e-06!GO:0031324;negative regulation of cellular metabolic process;2.98727321878838e-06!GO:0015630;microtubule cytoskeleton;3.25907429940542e-06!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.35767349516287e-06!GO:0003713;transcription coactivator activity;3.42114156650088e-06!GO:0006752;group transfer coenzyme metabolic process;3.90345584854071e-06!GO:0008026;ATP-dependent helicase activity;4.09366042907605e-06!GO:0000087;M phase of mitotic cell cycle;4.32517833262616e-06!GO:0009108;coenzyme biosynthetic process;4.51720659972144e-06!GO:0043566;structure-specific DNA binding;4.57422819215513e-06!GO:0001558;regulation of cell growth;4.68358868092041e-06!GO:0044427;chromosomal part;4.87348933015056e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;4.94066381967718e-06!GO:0007067;mitosis;5.75078971185114e-06!GO:0005773;vacuole;6.15792705891512e-06!GO:0004298;threonine endopeptidase activity;7.28141110917025e-06!GO:0000245;spliceosome assembly;8.37317030451561e-06!GO:0015980;energy derivation by oxidation of organic compounds;1.15492892700092e-05!GO:0005525;GTP binding;1.24084586272427e-05!GO:0005667;transcription factor complex;1.25611346644246e-05!GO:0046930;pore complex;1.26435210135746e-05!GO:0009892;negative regulation of metabolic process;1.27450245016037e-05!GO:0000785;chromatin;1.31053615462618e-05!GO:0016740;transferase activity;1.33947119624996e-05!GO:0003697;single-stranded DNA binding;1.3499492139367e-05!GO:0030036;actin cytoskeleton organization and biogenesis;1.35603472100187e-05!GO:0031988;membrane-bound vesicle;1.37327151591628e-05!GO:0005762;mitochondrial large ribosomal subunit;1.51902484120711e-05!GO:0000315;organellar large ribosomal subunit;1.51902484120711e-05!GO:0016023;cytoplasmic membrane-bound vesicle;1.54755308896006e-05!GO:0006260;DNA replication;1.58264349262114e-05!GO:0044440;endosomal part;1.82552939054084e-05!GO:0010008;endosome membrane;1.82552939054084e-05!GO:0006364;rRNA processing;1.84862650597796e-05!GO:0007243;protein kinase cascade;2.16043003505518e-05!GO:0005770;late endosome;2.20568976908053e-05!GO:0006613;cotranslational protein targeting to membrane;2.32813761931949e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.45242187605436e-05!GO:0051789;response to protein stimulus;2.45242187605436e-05!GO:0006986;response to unfolded protein;2.45242187605436e-05!GO:0016072;rRNA metabolic process;2.67035322010696e-05!GO:0005905;coated pit;2.73097244769608e-05!GO:0016563;transcription activator activity;2.75887838458634e-05!GO:0006091;generation of precursor metabolites and energy;2.76272705776783e-05!GO:0006403;RNA localization;2.80271127263572e-05!GO:0050657;nucleic acid transport;2.91037179216415e-05!GO:0051236;establishment of RNA localization;2.91037179216415e-05!GO:0050658;RNA transport;2.91037179216415e-05!GO:0051170;nuclear import;2.99931096104488e-05!GO:0051301;cell division;3.00950419579879e-05!GO:0043623;cellular protein complex assembly;3.23425726933192e-05!GO:0008092;cytoskeletal protein binding;3.3751374681513e-05!GO:0007010;cytoskeleton organization and biogenesis;3.3949850513359e-05!GO:0016787;hydrolase activity;3.88739261731959e-05!GO:0031982;vesicle;3.93253853608899e-05!GO:0045454;cell redox homeostasis;3.95999811275621e-05!GO:0006333;chromatin assembly or disassembly;3.97945935575877e-05!GO:0006606;protein import into nucleus;4.10162103592131e-05!GO:0050789;regulation of biological process;4.19382916702933e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;4.19382916702933e-05!GO:0031252;leading edge;4.19558582625294e-05!GO:0000139;Golgi membrane;4.41320034796474e-05!GO:0031410;cytoplasmic vesicle;4.83759165292004e-05!GO:0005769;early endosome;5.5924236689479e-05!GO:0048522;positive regulation of cellular process;5.65391376187135e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;5.87625181257317e-05!GO:0030133;transport vesicle;7.13850134056715e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;7.21444027900105e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.895353424485e-05!GO:0016481;negative regulation of transcription;7.9055754533921e-05!GO:0005813;centrosome;7.93736460897987e-05!GO:0032561;guanyl ribonucleotide binding;7.99771172338965e-05!GO:0019001;guanyl nucleotide binding;7.99771172338965e-05!GO:0030867;rough endoplasmic reticulum membrane;8.36580630764127e-05!GO:0000314;organellar small ribosomal subunit;8.54888461015798e-05!GO:0005763;mitochondrial small ribosomal subunit;8.54888461015798e-05!GO:0008654;phospholipid biosynthetic process;8.8286887817786e-05!GO:0016859;cis-trans isomerase activity;9.16866154658457e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;9.18193968100591e-05!GO:0030029;actin filament-based process;9.90337021050123e-05!GO:0016568;chromatin modification;0.000104898242704786!GO:0000323;lytic vacuole;0.000107672787455218!GO:0005764;lysosome;0.000107672787455218!GO:0019867;outer membrane;0.000124933728898495!GO:0005815;microtubule organizing center;0.000137008259914422!GO:0051427;hormone receptor binding;0.000153474924218393!GO:0031968;organelle outer membrane;0.000155877774594282!GO:0003724;RNA helicase activity;0.000170599639409843!GO:0016853;isomerase activity;0.000177378123141542!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000182985536279934!GO:0040008;regulation of growth;0.000184238038182754!GO:0005048;signal sequence binding;0.00021498945703292!GO:0030663;COPI coated vesicle membrane;0.000231024643489513!GO:0030126;COPI vesicle coat;0.000231024643489513!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000249854099964694!GO:0007050;cell cycle arrest;0.000255317254501352!GO:0016779;nucleotidyltransferase activity;0.000269034423360503!GO:0043021;ribonucleoprotein binding;0.000271936174595478!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000276114268215263!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000279421046574948!GO:0051329;interphase of mitotic cell cycle;0.000289299780171422!GO:0035257;nuclear hormone receptor binding;0.000296046793183126!GO:0051325;interphase;0.000307892837262188!GO:0033116;ER-Golgi intermediate compartment membrane;0.000311961942300488!GO:0019899;enzyme binding;0.000319261332323001!GO:0005885;Arp2/3 protein complex;0.000320273454496319!GO:0051028;mRNA transport;0.000392593048779597!GO:0030137;COPI-coated vesicle;0.000440588196716193!GO:0006334;nucleosome assembly;0.000444227485561808!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000538385145970702!GO:0015399;primary active transmembrane transporter activity;0.000538385145970702!GO:0043284;biopolymer biosynthetic process;0.000560216027069283!GO:0006414;translational elongation;0.000569273541204788!GO:0005741;mitochondrial outer membrane;0.000603876937835107!GO:0004576;oligosaccharyl transferase activity;0.00060563631922078!GO:0008250;oligosaccharyl transferase complex;0.00061613706008163!GO:0000279;M phase;0.000638367687747173!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000654639272633367!GO:0006891;intra-Golgi vesicle-mediated transport;0.00066646959687459!GO:0006612;protein targeting to membrane;0.000691060582033341!GO:0009165;nucleotide biosynthetic process;0.000785930046997645!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000812080211074559!GO:0030132;clathrin coat of coated pit;0.00084845247261563!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000931292653738883!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000957739338408163!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00101717240641523!GO:0031497;chromatin assembly;0.00107358445754541!GO:0006839;mitochondrial transport;0.00107853864020407!GO:0003729;mRNA binding;0.00108715924945155!GO:0030658;transport vesicle membrane;0.0010877642567763!GO:0048471;perinuclear region of cytoplasm;0.00111738069321291!GO:0051920;peroxiredoxin activity;0.00115735981196787!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00120451679136939!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00120451679136939!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00120451679136939!GO:0016363;nuclear matrix;0.00120462034688103!GO:0046474;glycerophospholipid biosynthetic process;0.00131518320490141!GO:0031072;heat shock protein binding;0.00146358737844959!GO:0003690;double-stranded DNA binding;0.00151464941530699!GO:0019843;rRNA binding;0.00157554487055691!GO:0051252;regulation of RNA metabolic process;0.00160369926992067!GO:0051128;regulation of cellular component organization and biogenesis;0.00180283263308467!GO:0044262;cellular carbohydrate metabolic process;0.00189848403913232!GO:0030118;clathrin coat;0.00190644345411917!GO:0007264;small GTPase mediated signal transduction;0.00195440503225295!GO:0003899;DNA-directed RNA polymerase activity;0.00208454574741502!GO:0051168;nuclear export;0.00210258450190306!GO:0009967;positive regulation of signal transduction;0.00213521237823731!GO:0018196;peptidyl-asparagine modification;0.00213521237823731!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00213521237823731!GO:0015992;proton transport;0.00213652522411633!GO:0008186;RNA-dependent ATPase activity;0.00237307685478787!GO:0006818;hydrogen transport;0.00240219314716842!GO:0006626;protein targeting to mitochondrion;0.00248526923788461!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00250724006667453!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00250724006667453!GO:0006650;glycerophospholipid metabolic process;0.0025362996285359!GO:0048500;signal recognition particle;0.002661826068039!GO:0005819;spindle;0.0028167805062287!GO:0048518;positive regulation of biological process;0.0028304473390747!GO:0016197;endosome transport;0.00284761712547687!GO:0019222;regulation of metabolic process;0.00301998061554083!GO:0046489;phosphoinositide biosynthetic process;0.00301998061554083!GO:0043681;protein import into mitochondrion;0.00302898972251811!GO:0016044;membrane organization and biogenesis;0.00322818508282819!GO:0045892;negative regulation of transcription, DNA-dependent;0.00334230773997071!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00340192742082667!GO:0030660;Golgi-associated vesicle membrane;0.00345626506469341!GO:0006892;post-Golgi vesicle-mediated transport;0.00360261144122559!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00374951498913786!GO:0003746;translation elongation factor activity;0.00374951498913786!GO:0004177;aminopeptidase activity;0.00380972060400362!GO:0065009;regulation of a molecular function;0.00388025114151484!GO:0030176;integral to endoplasmic reticulum membrane;0.00411599903511705!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00411599903511705!GO:0015002;heme-copper terminal oxidase activity;0.00411599903511705!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00411599903511705!GO:0004129;cytochrome-c oxidase activity;0.00411599903511705!GO:0051287;NAD binding;0.00424034516636907!GO:0007006;mitochondrial membrane organization and biogenesis;0.00426151575166627!GO:0005791;rough endoplasmic reticulum;0.00438472385756354!GO:0008139;nuclear localization sequence binding;0.00457992271412862!GO:0045941;positive regulation of transcription;0.0046935662505611!GO:0017166;vinculin binding;0.00477779965593767!GO:0008154;actin polymerization and/or depolymerization;0.00478138953733903!GO:0051540;metal cluster binding;0.00488730897020489!GO:0051536;iron-sulfur cluster binding;0.00488730897020489!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00496588231704696!GO:0005581;collagen;0.00515444327668933!GO:0000082;G1/S transition of mitotic cell cycle;0.00515803134369352!GO:0006383;transcription from RNA polymerase III promoter;0.00542802864811031!GO:0043488;regulation of mRNA stability;0.00544736449768948!GO:0043487;regulation of RNA stability;0.00544736449768948!GO:0006509;membrane protein ectodomain proteolysis;0.00582871325378249!GO:0033619;membrane protein proteolysis;0.00582871325378249!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00587697498940168!GO:0045047;protein targeting to ER;0.00587697498940168!GO:0000059;protein import into nucleus, docking;0.00589650212952448!GO:0004004;ATP-dependent RNA helicase activity;0.00608686621241287!GO:0030134;ER to Golgi transport vesicle;0.00615920395096655!GO:0030127;COPII vesicle coat;0.00644505323478164!GO:0012507;ER to Golgi transport vesicle membrane;0.00644505323478164!GO:0005869;dynactin complex;0.00650526702041728!GO:0004674;protein serine/threonine kinase activity;0.00673988070889907!GO:0030119;AP-type membrane coat adaptor complex;0.00679180693881448!GO:0045045;secretory pathway;0.00681708174515447!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.00682844170944039!GO:0006402;mRNA catabolic process;0.00700467275623644!GO:0022890;inorganic cation transmembrane transporter activity;0.00714339200356549!GO:0030125;clathrin vesicle coat;0.00720990391617204!GO:0030665;clathrin coated vesicle membrane;0.00720990391617204!GO:0046483;heterocycle metabolic process;0.00720990391617204!GO:0042802;identical protein binding;0.00723422487636514!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00726685476798349!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0073900863306736!GO:0048468;cell development;0.00740091080746106!GO:0051101;regulation of DNA binding;0.00765531516730832!GO:0043492;ATPase activity, coupled to movement of substances;0.00767761807312078!GO:0051087;chaperone binding;0.00776299825334113!GO:0030659;cytoplasmic vesicle membrane;0.00776299825334113!GO:0003711;transcription elongation regulator activity;0.00788839208467812!GO:0030521;androgen receptor signaling pathway;0.00797280960520453!GO:0048487;beta-tubulin binding;0.00816854048585834!GO:0008047;enzyme activator activity;0.00816895126083312!GO:0003684;damaged DNA binding;0.008619329833841!GO:0006740;NADPH regeneration;0.00873113386373698!GO:0006098;pentose-phosphate shunt;0.00873113386373698!GO:0003779;actin binding;0.00873113386373698!GO:0008022;protein C-terminus binding;0.00893463910926762!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00929453267896275!GO:0045893;positive regulation of transcription, DNA-dependent;0.00960127829821427!GO:0000049;tRNA binding;0.00963339063008795!GO:0008312;7S RNA binding;0.00972254991803245!GO:0035258;steroid hormone receptor binding;0.00993978603533335!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.010143521042846!GO:0033043;regulation of organelle organization and biogenesis;0.010143521042846!GO:0015631;tubulin binding;0.0105469344199379!GO:0065007;biological regulation;0.010552118122019!GO:0031902;late endosome membrane;0.0108445788129893!GO:0030384;phosphoinositide metabolic process;0.0110128859372423!GO:0008180;signalosome;0.0110844067991985!GO:0043433;negative regulation of transcription factor activity;0.0111598588719743!GO:0030131;clathrin adaptor complex;0.0113084065993609!GO:0005874;microtubule;0.0118290825675798!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0119785445464658!GO:0030880;RNA polymerase complex;0.0120054314877464!GO:0005096;GTPase activator activity;0.0120237146159987!GO:0008286;insulin receptor signaling pathway;0.0120442275887738!GO:0051052;regulation of DNA metabolic process;0.0121192223162527!GO:0006352;transcription initiation;0.0122755906296833!GO:0006595;polyamine metabolic process;0.0125211549388551!GO:0031625;ubiquitin protein ligase binding;0.0126482694962082!GO:0031529;ruffle organization and biogenesis;0.0128237971098754!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0130287255541774!GO:0001726;ruffle;0.0133747893216179!GO:0007179;transforming growth factor beta receptor signaling pathway;0.0134954574149624!GO:0030027;lamellipodium;0.0137183314799456!GO:0043022;ribosome binding;0.0141654212990745!GO:0051539;4 iron, 4 sulfur cluster binding;0.0145846852409637!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0147323414921232!GO:0006354;RNA elongation;0.0152845221624806!GO:0006289;nucleotide-excision repair;0.0154211174247568!GO:0016408;C-acyltransferase activity;0.0154243893631329!GO:0005520;insulin-like growth factor binding;0.0154243893631329!GO:0050681;androgen receptor binding;0.0157437041251291!GO:0006778;porphyrin metabolic process;0.0157437041251291!GO:0033013;tetrapyrrole metabolic process;0.0157437041251291!GO:0016126;sterol biosynthetic process;0.0157437041251291!GO:0005684;U2-dependent spliceosome;0.0157437041251291!GO:0051098;regulation of binding;0.0163331558278932!GO:0031901;early endosome membrane;0.0163331558278932!GO:0007030;Golgi organization and biogenesis;0.0171342554269483!GO:0030032;lamellipodium biogenesis;0.017444450139759!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0175908569160197!GO:0016272;prefoldin complex;0.0177789371390374!GO:0045936;negative regulation of phosphate metabolic process;0.0178671860024019!GO:0033673;negative regulation of kinase activity;0.0180013152286816!GO:0006469;negative regulation of protein kinase activity;0.0180013152286816!GO:0044433;cytoplasmic vesicle part;0.018487889091588!GO:0030041;actin filament polymerization;0.0186765327168872!GO:0008320;protein transmembrane transporter activity;0.0187906824443928!GO:0006497;protein amino acid lipidation;0.0192538783837995!GO:0050662;coenzyme binding;0.0193145321521191!GO:0022884;macromolecule transmembrane transporter activity;0.0193544091329124!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0193544091329124!GO:0005862;muscle thin filament tropomyosin;0.0195745223594086!GO:0008033;tRNA processing;0.0198359265613576!GO:0048144;fibroblast proliferation;0.0198359265613576!GO:0048145;regulation of fibroblast proliferation;0.0198359265613576!GO:0000209;protein polyubiquitination;0.0207102905198516!GO:0007051;spindle organization and biogenesis;0.0208269215691781!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0214560964069602!GO:0000428;DNA-directed RNA polymerase complex;0.0214560964069602!GO:0030833;regulation of actin filament polymerization;0.021727246851992!GO:0019752;carboxylic acid metabolic process;0.0217954411522692!GO:0046467;membrane lipid biosynthetic process;0.0218899769128379!GO:0006082;organic acid metabolic process;0.0227617123348345!GO:0000339;RNA cap binding;0.0233612951173593!GO:0016301;kinase activity;0.0234563833213859!GO:0051348;negative regulation of transferase activity;0.0235107768890673!GO:0006979;response to oxidative stress;0.0235107768890673!GO:0006302;double-strand break repair;0.0237097607720281!GO:0005832;chaperonin-containing T-complex;0.0237622294205364!GO:0005637;nuclear inner membrane;0.0238533359840419!GO:0005801;cis-Golgi network;0.0239354955173575!GO:0045639;positive regulation of myeloid cell differentiation;0.0240756771730086!GO:0044452;nucleolar part;0.0240756771730086!GO:0050811;GABA receptor binding;0.0241227567820524!GO:0008601;protein phosphatase type 2A regulator activity;0.0241910148658761!GO:0048146;positive regulation of fibroblast proliferation;0.0246612854276522!GO:0006401;RNA catabolic process;0.0248037112968469!GO:0030518;steroid hormone receptor signaling pathway;0.0250589612784447!GO:0007040;lysosome organization and biogenesis;0.0262561178482494!GO:0000075;cell cycle checkpoint;0.0268735173155441!GO:0006739;NADP metabolic process;0.027220759200104!GO:0035035;histone acetyltransferase binding;0.0274603825985138!GO:0012506;vesicle membrane;0.0275151844579727!GO:0031543;peptidyl-proline dioxygenase activity;0.0293976562755935!GO:0000096;sulfur amino acid metabolic process;0.0297035967769167!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0302703878772459!GO:0007021;tubulin folding;0.0306136860066673!GO:0030508;thiol-disulfide exchange intermediate activity;0.0307323234944285!GO:0006261;DNA-dependent DNA replication;0.0307473160742572!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0310422918883406!GO:0006506;GPI anchor biosynthetic process;0.0312227383309658!GO:0005665;DNA-directed RNA polymerase II, core complex;0.031689598161771!GO:0007569;cell aging;0.031824438889759!GO:0000786;nucleosome;0.0319774199707537!GO:0042168;heme metabolic process;0.0320666295761425!GO:0006611;protein export from nucleus;0.0320666295761425!GO:0032906;transforming growth factor-beta2 production;0.0323433450536529!GO:0032909;regulation of transforming growth factor-beta2 production;0.0323433450536529!GO:0007242;intracellular signaling cascade;0.0326038326496271!GO:0007034;vacuolar transport;0.0331377475858817!GO:0006118;electron transport;0.0332778078901682!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0334309771630327!GO:0031371;ubiquitin conjugating enzyme complex;0.0337354647331502!GO:0031272;regulation of pseudopodium formation;0.0337354647331502!GO:0031269;pseudopodium formation;0.0337354647331502!GO:0031344;regulation of cell projection organization and biogenesis;0.0337354647331502!GO:0031268;pseudopodium organization and biogenesis;0.0337354647331502!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0337354647331502!GO:0031274;positive regulation of pseudopodium formation;0.0337354647331502!GO:0008287;protein serine/threonine phosphatase complex;0.033792897005504!GO:0005774;vacuolar membrane;0.0347866180525998!GO:0006607;NLS-bearing substrate import into nucleus;0.0348916959652421!GO:0006144;purine base metabolic process;0.0351140900019265!GO:0008234;cysteine-type peptidase activity;0.0358943354761383!GO:0008632;apoptotic program;0.0363354302627704!GO:0003682;chromatin binding;0.0365338080967731!GO:0046426;negative regulation of JAK-STAT cascade;0.0373107235827195!GO:0031124;mRNA 3'-end processing;0.0376752830237544!GO:0009116;nucleoside metabolic process;0.0378701970401343!GO:0007265;Ras protein signal transduction;0.0388575589788809!GO:0006779;porphyrin biosynthetic process;0.0393739527184511!GO:0033014;tetrapyrrole biosynthetic process;0.0393739527184511!GO:0007052;mitotic spindle organization and biogenesis;0.039402352323563!GO:0051059;NF-kappaB binding;0.0397689795126667!GO:0042326;negative regulation of phosphorylation;0.04004773546387!GO:0008652;amino acid biosynthetic process;0.04004773546387!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0400551516932022!GO:0010257;NADH dehydrogenase complex assembly;0.0400551516932022!GO:0033108;mitochondrial respiratory chain complex assembly;0.0400551516932022!GO:0006376;mRNA splice site selection;0.0405927040476512!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0405927040476512!GO:0006417;regulation of translation;0.0406652328226575!GO:0006695;cholesterol biosynthetic process;0.0408140308280623!GO:0030911;TPR domain binding;0.0413820895288938!GO:0045792;negative regulation of cell size;0.0413866951214335!GO:0003678;DNA helicase activity;0.0413982940741043!GO:0005744;mitochondrial inner membrane presequence translocase complex;0.0416316700492256!GO:0030308;negative regulation of cell growth;0.042083034896443!GO:0030145;manganese ion binding;0.0422141526447248!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0423317453248845!GO:0016251;general RNA polymerase II transcription factor activity;0.0423349860736139!GO:0045334;clathrin-coated endocytic vesicle;0.0424588872661566!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0427401739320706!GO:0046519;sphingoid metabolic process;0.0428747510724473!GO:0006007;glucose catabolic process;0.0429673083718259!GO:0000159;protein phosphatase type 2A complex;0.0437516070171204!GO:0004722;protein serine/threonine phosphatase activity;0.0439938812333432!GO:0032535;regulation of cellular component size;0.0442069513916726!GO:0030503;regulation of cell redox homeostasis;0.0444675876678507!GO:0006505;GPI anchor metabolic process;0.0450803614749685!GO:0000776;kinetochore;0.0454195932125125!GO:0022408;negative regulation of cell-cell adhesion;0.0455047466213909!GO:0009225;nucleotide-sugar metabolic process;0.0455823424130685!GO:0042585;germinal vesicle;0.0462031863508406!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0462356268602505!GO:0007033;vacuole organization and biogenesis;0.0463221964840059!GO:0051537;2 iron, 2 sulfur cluster binding;0.0464185791113547!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0465088788705133!GO:0005100;Rho GTPase activator activity;0.0467462144384368!GO:0019206;nucleoside kinase activity;0.046753115677095!GO:0050178;phenylpyruvate tautomerase activity;0.046753115677095!GO:0033239;negative regulation of amine metabolic process;0.046753115677095!GO:0045763;negative regulation of amino acid metabolic process;0.046753115677095!GO:0001933;negative regulation of protein amino acid phosphorylation;0.046753115677095!GO:0043624;cellular protein complex disassembly;0.0468262034031863!GO:0032940;secretion by cell;0.0468893244909426!GO:0043065;positive regulation of apoptosis;0.0468893244909426!GO:0030128;clathrin coat of endocytic vesicle;0.0482226524816934!GO:0030669;clathrin-coated endocytic vesicle membrane;0.0482226524816934!GO:0030122;AP-2 adaptor complex;0.0482226524816934!GO:0030832;regulation of actin filament length;0.0482530970101032!GO:0030100;regulation of endocytosis;0.0483920379397264!GO:0043068;positive regulation of programmed cell death;0.0483920379397264!GO:0042158;lipoprotein biosynthetic process;0.048566343333825!GO:0033559;unsaturated fatty acid metabolic process;0.0486064254584025!GO:0006636;unsaturated fatty acid biosynthetic process;0.0486064254584025!GO:0032956;regulation of actin cytoskeleton organization and biogenesis;0.0486560914679673!GO:0005586;collagen type III;0.0491071451030004!GO:0032984;macromolecular complex disassembly;0.0491071451030004!GO:0019798;procollagen-proline dioxygenase activity;0.0493396300784381 | |||
|sample_id=11934 | |sample_id=11934 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 100: | ||
|sample_tissue=ANATOMICAL SYSTEM | |sample_tissue=ANATOMICAL SYSTEM | ||
|top_motifs=UFEwm:3.45576589677;ALX4:3.44084096562;NKX2-2,8:3.29312062069;HMGA1,2:3.29050626169;EVI1:3.13805424835;TAL1_TCF{3,4,12}:2.57451948664;KLF4:2.34771133235;GLI1..3:2.3284872242;FOXL1:2.32389508032;NR3C1:2.23016755176;AIRE:2.18109441132;ESR1:2.13354365148;GATA4:1.85324745425;PRDM1:1.85070301798;ZIC1..3:1.82730215118;FOXD3:1.80443099375;TOPORS:1.70737718026;HES1:1.6199016451;NFE2L1:1.56741113579;ZNF384:1.46408163546;MYBL2:1.45292592858;TEAD1:1.39831979109;RXR{A,B,G}:1.39706326227;HIF1A:1.37032720376;NKX3-1:1.35822484835;NR6A1:1.31224560131;RXRA_VDR{dimer}:1.30467729591;ZBTB16:1.28489630155;HMX1:1.24929018109;NKX2-1,4:1.1496249486;GZF1:1.14927929783;HSF1,2:1.14279297858;LHX3,4:1.09755260571;HOX{A4,D4}:0.943967968125;TLX1..3_NFIC{dimer}:0.859780034477;MAFB:0.810179127591;NKX3-2:0.80650696901;SRF:0.794183018035;ARID5B:0.784046440476;TBX4,5:0.774885674936;TP53:0.763958233319;ZBTB6:0.751643542081;NANOG{mouse}:0.727320772197;IKZF1:0.701817511949;HOX{A5,B5}:0.681262363729;ZNF423:0.680248960207;ZNF238:0.657013161886;TFCP2:0.639917181324;TFAP2{A,C}:0.619532645787;HAND1,2:0.602314867681;PAX1,9:0.58851094671;PITX1..3:0.587857552603;PAX4:0.57313500725;ATF6:0.561180550498;XBP1:0.559505166416;EBF1:0.521552784961;GTF2I:0.521379471319;PPARG:0.456704383278;PATZ1:0.43680295441;NKX6-1,2:0.424374267185;SPZ1:0.420269537082;CDX1,2,4:0.384902655318;FOXP1:0.379886402036;NFATC1..3:0.348111805907;GCM1,2:0.331411433795;SOX17:0.301657702915;PAX5:0.299521746809;IRF1,2:0.298927397029;RREB1:0.290208726173;EN1,2:0.286202178637;BPTF:0.284333497651;TFAP4:0.269173903087;CDC5L:0.267047961292;HIC1:0.25398313425;MAZ:0.233038950989;TFAP2B:0.224712330463;MTE{core}:0.218673076012;FOXO1,3,4:0.214450477359;FOXM1:0.158901535456;SMAD1..7,9:0.145929763849;XCPE1{core}:0.129302172517;IKZF2:0.113619243665;MTF1:0.0925247924988;YY1:0.083361083052;T:0.0707488678451;ALX1:0.0366128648945;TEF:0.0349778657848;GTF2A1,2:0.0186151265916;ONECUT1,2:0.0133618978516;PAX8:0.00879583704973;HLF:0.00834689001276;DMAP1_NCOR{1,2}_SMARC:0.0021088809745;SOX5:-0.00620281862978;BACH2:-0.0202653901257;NFE2L2:-0.0342448766744;POU5F1:-0.0457787516821;MYB:-0.0574070602301;MYFfamily:-0.0841350990287;AHR_ARNT_ARNT2:-0.13910136713;DBP:-0.155397415385;MZF1:-0.167450354101;FOXP3:-0.167578724991;NFE2:-0.172953302516;STAT2,4,6:-0.188965832525;PAX2:-0.190248675678;FOXA2:-0.226961659327;TBP:-0.271193170443;ZFP161:-0.287232279701;NR1H4:-0.301769902337;STAT5{A,B}:-0.337318135652;EGR1..3:-0.33966749917;FOS_FOS{B,L1}_JUN{B,D}:-0.349875348771;REST:-0.355685623397;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.379839439584;SNAI1..3:-0.393839124258;FOX{I1,J2}:-0.410468183431;CEBPA,B_DDIT3:-0.413270183678;ZNF148:-0.413358983447;SP1:-0.426327662162;AR:-0.435058035472;POU6F1:-0.437769017714;NFKB1_REL_RELA:-0.451570288711;HNF4A_NR2F1,2:-0.45307772912;ZNF143:-0.464813880868;NR5A1,2:-0.468392323262;TFDP1:-0.48404877044;MEF2{A,B,C,D}:-0.48517082984;ELK1,4_GABP{A,B1}:-0.48670207766;HNF1A:-0.487326143076;IRF7:-0.487511968145;RFX1:-0.491096773221;TLX2:-0.49191553425;FOSL2:-0.510958516428;POU1F1:-0.525494540806;RFX2..5_RFXANK_RFXAP:-0.528418471587;RBPJ:-0.546452648486;POU3F1..4:-0.548528568143;GFI1B:-0.557727981577;RUNX1..3:-0.559140375116;FOX{D1,D2}:-0.574923195095;GFI1:-0.576126232664;MED-1{core}:-0.580492616909;NRF1:-0.581319860082;LMO2:-0.585149075186;ADNP_IRX_SIX_ZHX:-0.598370677434;PDX1:-0.623692775334;bHLH_family:-0.637453786541;ATF4:-0.68377111266;SPI1:-0.706204756944;NFIX:-0.716894259953;E2F1..5:-0.742679242523;SPIB:-0.777848784846;ETS1,2:-0.778463889282;CREB1:-0.798402295379;HOX{A6,A7,B6,B7}:-0.816795607738;ATF5_CREB3:-0.844158991109;BREu{core}:-0.84506545911;NFIL3:-0.87413441287;FOXN1:-0.885219222103;ZEB1:-0.887697843783;PAX6:-0.892697130097;OCT4_SOX2{dimer}:-0.910568805364;SREBF1,2:-0.931774141249;ELF1,2,4:-0.936050403518;LEF1_TCF7_TCF7L1,2:-0.937653372275;NHLH1,2:-0.951650456329;ATF2:-0.961863569469;SOX2:-0.984564108433;PAX3,7:-1.04517938547;CUX2:-1.12449172286;NKX2-3_NKX2-5:-1.1397751285;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.15390435371;HOXA9_MEIS1:-1.23255868742;NFY{A,B,C}:-1.23888702592;TGIF1:-1.24279121128;STAT1,3:-1.25104815452;EP300:-1.32183789619;POU2F1..3:-1.349571558;MYOD1:-1.3836703195;JUN:-1.45537176292;PRRX1,2:-1.48412274992;ESRRA:-1.51967948993;RORA:-1.55852894079;SOX{8,9,10}:-1.56036800076;FOXQ1:-1.56914128863;HBP1_HMGB_SSRP1_UBTF:-1.57028336548;GATA6:-1.57219723847;FOX{F1,F2,J1}:-1.61854335132;VSX1,2:-1.6768573339;CRX:-1.68832120894;PBX1:-1.72964260891;NANOG:-1.95886553551 | |top_motifs=UFEwm:3.45576589677;ALX4:3.44084096562;NKX2-2,8:3.29312062069;HMGA1,2:3.29050626169;EVI1:3.13805424835;TAL1_TCF{3,4,12}:2.57451948664;KLF4:2.34771133235;GLI1..3:2.3284872242;FOXL1:2.32389508032;NR3C1:2.23016755176;AIRE:2.18109441132;ESR1:2.13354365148;GATA4:1.85324745425;PRDM1:1.85070301798;ZIC1..3:1.82730215118;FOXD3:1.80443099375;TOPORS:1.70737718026;HES1:1.6199016451;NFE2L1:1.56741113579;ZNF384:1.46408163546;MYBL2:1.45292592858;TEAD1:1.39831979109;RXR{A,B,G}:1.39706326227;HIF1A:1.37032720376;NKX3-1:1.35822484835;NR6A1:1.31224560131;RXRA_VDR{dimer}:1.30467729591;ZBTB16:1.28489630155;HMX1:1.24929018109;NKX2-1,4:1.1496249486;GZF1:1.14927929783;HSF1,2:1.14279297858;LHX3,4:1.09755260571;HOX{A4,D4}:0.943967968125;TLX1..3_NFIC{dimer}:0.859780034477;MAFB:0.810179127591;NKX3-2:0.80650696901;SRF:0.794183018035;ARID5B:0.784046440476;TBX4,5:0.774885674936;TP53:0.763958233319;ZBTB6:0.751643542081;NANOG{mouse}:0.727320772197;IKZF1:0.701817511949;HOX{A5,B5}:0.681262363729;ZNF423:0.680248960207;ZNF238:0.657013161886;TFCP2:0.639917181324;TFAP2{A,C}:0.619532645787;HAND1,2:0.602314867681;PAX1,9:0.58851094671;PITX1..3:0.587857552603;PAX4:0.57313500725;ATF6:0.561180550498;XBP1:0.559505166416;EBF1:0.521552784961;GTF2I:0.521379471319;PPARG:0.456704383278;PATZ1:0.43680295441;NKX6-1,2:0.424374267185;SPZ1:0.420269537082;CDX1,2,4:0.384902655318;FOXP1:0.379886402036;NFATC1..3:0.348111805907;GCM1,2:0.331411433795;SOX17:0.301657702915;PAX5:0.299521746809;IRF1,2:0.298927397029;RREB1:0.290208726173;EN1,2:0.286202178637;BPTF:0.284333497651;TFAP4:0.269173903087;CDC5L:0.267047961292;HIC1:0.25398313425;MAZ:0.233038950989;TFAP2B:0.224712330463;MTE{core}:0.218673076012;FOXO1,3,4:0.214450477359;FOXM1:0.158901535456;SMAD1..7,9:0.145929763849;XCPE1{core}:0.129302172517;IKZF2:0.113619243665;MTF1:0.0925247924988;YY1:0.083361083052;T:0.0707488678451;ALX1:0.0366128648945;TEF:0.0349778657848;GTF2A1,2:0.0186151265916;ONECUT1,2:0.0133618978516;PAX8:0.00879583704973;HLF:0.00834689001276;DMAP1_NCOR{1,2}_SMARC:0.0021088809745;SOX5:-0.00620281862978;BACH2:-0.0202653901257;NFE2L2:-0.0342448766744;POU5F1:-0.0457787516821;MYB:-0.0574070602301;MYFfamily:-0.0841350990287;AHR_ARNT_ARNT2:-0.13910136713;DBP:-0.155397415385;MZF1:-0.167450354101;FOXP3:-0.167578724991;NFE2:-0.172953302516;STAT2,4,6:-0.188965832525;PAX2:-0.190248675678;FOXA2:-0.226961659327;TBP:-0.271193170443;ZFP161:-0.287232279701;NR1H4:-0.301769902337;STAT5{A,B}:-0.337318135652;EGR1..3:-0.33966749917;FOS_FOS{B,L1}_JUN{B,D}:-0.349875348771;REST:-0.355685623397;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.379839439584;SNAI1..3:-0.393839124258;FOX{I1,J2}:-0.410468183431;CEBPA,B_DDIT3:-0.413270183678;ZNF148:-0.413358983447;SP1:-0.426327662162;AR:-0.435058035472;POU6F1:-0.437769017714;NFKB1_REL_RELA:-0.451570288711;HNF4A_NR2F1,2:-0.45307772912;ZNF143:-0.464813880868;NR5A1,2:-0.468392323262;TFDP1:-0.48404877044;MEF2{A,B,C,D}:-0.48517082984;ELK1,4_GABP{A,B1}:-0.48670207766;HNF1A:-0.487326143076;IRF7:-0.487511968145;RFX1:-0.491096773221;TLX2:-0.49191553425;FOSL2:-0.510958516428;POU1F1:-0.525494540806;RFX2..5_RFXANK_RFXAP:-0.528418471587;RBPJ:-0.546452648486;POU3F1..4:-0.548528568143;GFI1B:-0.557727981577;RUNX1..3:-0.559140375116;FOX{D1,D2}:-0.574923195095;GFI1:-0.576126232664;MED-1{core}:-0.580492616909;NRF1:-0.581319860082;LMO2:-0.585149075186;ADNP_IRX_SIX_ZHX:-0.598370677434;PDX1:-0.623692775334;bHLH_family:-0.637453786541;ATF4:-0.68377111266;SPI1:-0.706204756944;NFIX:-0.716894259953;E2F1..5:-0.742679242523;SPIB:-0.777848784846;ETS1,2:-0.778463889282;CREB1:-0.798402295379;HOX{A6,A7,B6,B7}:-0.816795607738;ATF5_CREB3:-0.844158991109;BREu{core}:-0.84506545911;NFIL3:-0.87413441287;FOXN1:-0.885219222103;ZEB1:-0.887697843783;PAX6:-0.892697130097;OCT4_SOX2{dimer}:-0.910568805364;SREBF1,2:-0.931774141249;ELF1,2,4:-0.936050403518;LEF1_TCF7_TCF7L1,2:-0.937653372275;NHLH1,2:-0.951650456329;ATF2:-0.961863569469;SOX2:-0.984564108433;PAX3,7:-1.04517938547;CUX2:-1.12449172286;NKX2-3_NKX2-5:-1.1397751285;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.15390435371;HOXA9_MEIS1:-1.23255868742;NFY{A,B,C}:-1.23888702592;TGIF1:-1.24279121128;STAT1,3:-1.25104815452;EP300:-1.32183789619;POU2F1..3:-1.349571558;MYOD1:-1.3836703195;JUN:-1.45537176292;PRRX1,2:-1.48412274992;ESRRA:-1.51967948993;RORA:-1.55852894079;SOX{8,9,10}:-1.56036800076;FOXQ1:-1.56914128863;HBP1_HMGB_SSRP1_UBTF:-1.57028336548;GATA6:-1.57219723847;FOX{F1,F2,J1}:-1.61854335132;VSX1,2:-1.6768573339;CRX:-1.68832120894;PBX1:-1.72964260891;NANOG:-1.95886553551 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11934-125I8;search_select_hide=table117:FF:11934-125I8 | |||
}} | }} | ||
Latest revision as of 18:30, 4 June 2020
| Name: | Olfactory epithelial cells, donor2 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs13817 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13817
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13817
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.273 |
| 10 | 10 | 0.0928 |
| 100 | 100 | 0.63 |
| 101 | 101 | 0.843 |
| 102 | 102 | 0.245 |
| 103 | 103 | 0.601 |
| 104 | 104 | 0.846 |
| 105 | 105 | 0.118 |
| 106 | 106 | 0.0201 |
| 107 | 107 | 0.0278 |
| 108 | 108 | 0.192 |
| 109 | 109 | 0.293 |
| 11 | 11 | 0.214 |
| 110 | 110 | 0.266 |
| 111 | 111 | 0.528 |
| 112 | 112 | 0.236 |
| 113 | 113 | 0.841 |
| 114 | 114 | 0.0225 |
| 115 | 115 | 0.0122 |
| 116 | 116 | 0.036 |
| 117 | 117 | 0.295 |
| 118 | 118 | 0.511 |
| 119 | 119 | 0.164 |
| 12 | 12 | 0.21 |
| 120 | 120 | 0.0711 |
| 121 | 121 | 0.752 |
| 122 | 122 | 0.063 |
| 123 | 123 | 0.525 |
| 124 | 124 | 0.273 |
| 125 | 125 | 0.342 |
| 126 | 126 | 0.521 |
| 127 | 127 | 0.96 |
| 128 | 128 | 0.193 |
| 129 | 129 | 0.837 |
| 13 | 13 | 0.701 |
| 130 | 130 | 0.152 |
| 131 | 131 | 0.525 |
| 132 | 132 | 0.138 |
| 133 | 133 | 0.95 |
| 134 | 134 | 0.665 |
| 135 | 135 | 0.935 |
| 136 | 136 | 0.634 |
| 137 | 137 | 0.186 |
| 138 | 138 | 0.922 |
| 139 | 139 | 0.765 |
| 14 | 14 | 0.345 |
| 140 | 140 | 0.89 |
| 141 | 141 | 0.5 |
| 142 | 142 | 0.263 |
| 143 | 143 | 0.819 |
| 144 | 144 | 0.656 |
| 145 | 145 | 0.365 |
| 146 | 146 | 0.126 |
| 147 | 147 | 0.249 |
| 148 | 148 | 0.647 |
| 149 | 149 | 0.0378 |
| 15 | 15 | 0.813 |
| 150 | 150 | 0.298 |
| 151 | 151 | 0.704 |
| 152 | 152 | 0.0527 |
| 153 | 153 | 0.716 |
| 154 | 154 | 0.487 |
| 155 | 155 | 0.407 |
| 156 | 156 | 0.353 |
| 157 | 157 | 0.32 |
| 158 | 158 | 0.0575 |
| 159 | 159 | 0.743 |
| 16 | 16 | 0.0105 |
| 160 | 160 | 0.125 |
| 161 | 161 | 0.741 |
| 162 | 162 | 0.447 |
| 163 | 163 | 0.975 |
| 164 | 164 | 0.0214 |
| 165 | 165 | 0.865 |
| 166 | 166 | 0.0442 |
| 167 | 167 | 0.897 |
| 168 | 168 | 0.549 |
| 169 | 169 | 0.00543 |
| 17 | 17 | 0.305 |
| 18 | 18 | 0.346 |
| 19 | 19 | 0.00209 |
| 2 | 2 | 0.466 |
| 20 | 20 | 0.772 |
| 21 | 21 | 0.0267 |
| 22 | 22 | 0.497 |
| 23 | 23 | 0.437 |
| 24 | 24 | 0.428 |
| 25 | 25 | 0.555 |
| 26 | 26 | 0.121 |
| 27 | 27 | 0.607 |
| 28 | 28 | 0.562 |
| 29 | 29 | 0.327 |
| 3 | 3 | 0.317 |
| 30 | 30 | 0.893 |
| 31 | 31 | 0.526 |
| 32 | 32 | 1.18936e-19 |
| 33 | 33 | 0.805 |
| 34 | 34 | 0.776 |
| 35 | 35 | 0.46 |
| 36 | 36 | 0.258 |
| 37 | 37 | 0.0327 |
| 38 | 38 | 0.507 |
| 39 | 39 | 0.292 |
| 4 | 4 | 0.455 |
| 40 | 40 | 0.858 |
| 41 | 41 | 0.536 |
| 42 | 42 | 0.69 |
| 43 | 43 | 0.469 |
| 44 | 44 | 0.044 |
| 45 | 45 | 0.707 |
| 46 | 46 | 0.132 |
| 47 | 47 | 0.56 |
| 48 | 48 | 0.479 |
| 49 | 49 | 0.951 |
| 5 | 5 | 0.864 |
| 50 | 50 | 0.816 |
| 51 | 51 | 0.78 |
| 52 | 52 | 0.878 |
| 53 | 53 | 0.568 |
| 54 | 54 | 0.379 |
| 55 | 55 | 0.204 |
| 56 | 56 | 0.828 |
| 57 | 57 | 0.561 |
| 58 | 58 | 0.767 |
| 59 | 59 | 0.0818 |
| 6 | 6 | 0.496 |
| 60 | 60 | 0.727 |
| 61 | 61 | 0.908 |
| 62 | 62 | 0.334 |
| 63 | 63 | 0.196 |
| 64 | 64 | 0.748 |
| 65 | 65 | 0.566 |
| 66 | 66 | 0.0645 |
| 67 | 67 | 0.726 |
| 68 | 68 | 0.563 |
| 69 | 69 | 0.266 |
| 7 | 7 | 0.487 |
| 70 | 70 | 0.115 |
| 71 | 71 | 0.0681 |
| 72 | 72 | 0.44 |
| 73 | 73 | 0.0302 |
| 74 | 74 | 0.479 |
| 75 | 75 | 0.157 |
| 76 | 76 | 0.497 |
| 77 | 77 | 0.0278 |
| 78 | 78 | 0.985 |
| 79 | 79 | 1.70911e-6 |
| 8 | 8 | 0.0622 |
| 80 | 80 | 0.0478 |
| 81 | 81 | 0.845 |
| 82 | 82 | 0.0136 |
| 83 | 83 | 0.413 |
| 84 | 84 | 0.404 |
| 85 | 85 | 0.03 |
| 86 | 86 | 0.705 |
| 87 | 87 | 0.567 |
| 88 | 88 | 0.174 |
| 89 | 89 | 0.143 |
| 9 | 9 | 0.969 |
| 90 | 90 | 0.994 |
| 91 | 91 | 0.583 |
| 92 | 92 | 0.21 |
| 93 | 93 | 0.86 |
| 94 | 94 | 0.176 |
| 95 | 95 | 0.258 |
| 96 | 96 | 0.894 |
| 97 | 97 | 0.967 |
| 98 | 98 | 0.434 |
| 99 | 99 | 0.00716 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13817
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
FF:0000002 in vivo cell sample
FF:0000210 human sample
FF:0200002 olfactory epithelial cell sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000197 (receptor cell)
0000003 (native cell)
0000548 (animal cell)
0000075 (columnar/cuboidal epithelial cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000710 (neurecto-epithelial cell)
0000255 (eukaryotic cell)
0002077 (ecto-epithelial cell)
0000098 (sensory epithelial cell)
0002167 (olfactory epithelial cell)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0200002 (olfactory epithelial cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000133 (neurectodermal cell)
CL:0000221 (ectodermal cell)
