FF:12176-128I7: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023 | |DRA_sample_Accession=CAGE@SAMD00005983 | ||
|HumanCAGEScanFiles=NCig10019;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.primary_cell.CAGEScan/Whole%2520blood%2520%28ribopure%29%252c%2520donor090325%252c%2520donation1.NCig10019.12176-128I7.hg19.GCTATA.3prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.primary_cell.CAGEScan/Whole%2520blood%2520%28ribopure%29%252c%2520donor090325%252c%2520donation1.NCig10019.12176-128I7.hg19.GCTATA.5prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.primary_cell.CAGEScan/Whole%2520blood%2520%28ribopure%29%252c%2520donor090325%252c%2520donation1.NCig10019.12176-128I7.hg19.GCTATA.bam;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.primary_cell.CAGEScan/Whole%2520blood%2520%28ribopure%29%252c%2520donor090325%252c%2520donation1.NCig10019.12176-128I7.hg19.GCTATA.pairs.bed.gz | |||
|accession_numbers=CAGE;DRX008532;DRR009404;DRZ000829;DRZ002214;DRZ012179;DRZ013564 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000178,UBERON:0000479,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000179,UBERON:0000463,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0010317,UBERON:0002390,UBERON:0004535,UBERON:0002193,UBERON:0001009 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003 | |ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003 | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000998,FF:0010053,FF:0000004,FF:0000281 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chrX:131623044..131623089,-!p1@MBNL3!2.73!2090.96!MBNL3;;chr11:47400078..47400106,-!p1@SPI1!2.48!301.60!SPI1;;chr12:54694653..54694672,-!p2@NFE2!2.29!193.44!NFE2;;chrX:131623026..131623039,-!p5@MBNL3!2.26!180.58!MBNL3;;chr2:68592406..68592424,+!p1@PLEK!2.25!177.01!PLEK;;chrX:131622958..131622978,-!p3@MBNL3!2.17!184.39!MBNL3;;chrX:131622988..131623006,-!p8@MBNL3!2.14!137.94!MBNL3;;chr12:54694758..54694805,-!p1@NFE2!2.13!159.14!NFE2;;chrX:70315688..70315709,+!p1@FOXO4!1.96!200.83!FOXO4;;chr7:28220506..28220552,-!p3@JAZF1!1.86!71.23!JAZF1;;chr12:54694807..54694832,-!p3@NFE2!1.85!69.33!NFE2;;chr2:70142232..70142251,+!p1@MXD1!1.84!368.54!MXD1;;chr7:28220354..28220441,-!p1@JAZF1!1.83!967.70!JAZF1;;chr16:85932760..85932775,+!p1@IRF8!1.76!56.22!IRF8;;chr5:133451294..133451310,+!p2@TCF7!1.76!55.98!TCF7;;chr10:51572408..51572454,+!p3@NCOA4!1.74!298.98!NCOA4;;chr7:50343634..50343717,+!p2@IKZF1!1.72!50.98!IKZF1;;chr3:128212033..128212051,-!p1@GATA2!1.71!50.51!GATA2;;chr10:51572339..51572376,+!p4@NCOA4!1.70!106.97!NCOA4;;chr17:45810594..45810608,+!p1@TBX21!1.69!48.36!TBX21;;chr4:109087445..109087463,-!p1@LEF1!1.67!45.98!LEF1;;chr7:50344289..50344323,+!p1@IKZF1!1.66!45.03!IKZF1;;chr9:117150254..117150271,-!p1@AKNA!1.65!114.35!AKNA;;chr10:51585449..51585487,+!p6@NCOA4!1.63!41.45!NCOA4;;chr2:231090433..231090469,+!p1@SP140!1.61!39.31!SP140;;chr1:25256756..25256774,-!p1@RUNX3!1.54!61.94!RUNX3;;chr3:141748010..141748030,-!p8@TFDP2!1.54!33.35!TFDP2;;chr3:63953435..63953499,+!p1@ATXN7!1.53!32.64!ATXN7;;chr17:37934365..37934387,-!p2@IKZF3!1.53!32.64!IKZF3;;chr2:148778973..148779035,+!p3@MBD5!1.51!78.62!MBD5;;chr19:50922187..50922204,+!p1@SPIB!1.51!31.21!SPIB;;chr2:100759010..100759035,-!p1@AFF3!1.50!30.49!AFF3;;chr6:391743..391759,+!p1@IRF4!1.49!29.78!IRF4;;chr20:56195474..56195506,-!p1@ZBP1!1.47!28.35!ZBP1;;chr5:133450365..133450444,+!p1@TCF7!1.46!121.74!TCF7;;chr11:111249993..111250006,-!p1@POU2AF1!1.46!28.11!POU2AF1;;chrY:21906594..21906622,-!p1@KDM5D!1.46!27.87!KDM5D;;chr3:27763807..27763822,-!p1@EOMES!1.45!26.92!EOMES;;chr2:192015701..192015743,-!p1@STAT4!1.43!35.50!STAT4;;chr11:47400062..47400077,-!p2@SPI1!1.43!25.73!SPI1;;chr19:13213511..13213545,-!p2@LYL1!1.41!26.92!LYL1;;chr21:34442439..34442455,+!p1@OLIG1!1.41!24.78!OLIG1;;chr12:54778471..54778528,-!p1@ZNF385A!1.40!24.06!ZNF385A;;chr20:50159198..50159299,-!p1@NFATC2!1.38!33.11!NFATC2;;chr2:68592394..68592405,+!p2@PLEK!1.37!22.63!PLEK;;chr7:28725715..28725727,+!p3@CREB5!1.36!25.97!CREB5;;chr11:47399996..47400014,-!p4@SPI1!1.36!22.16!SPI1;;chr2:231090471..231090504,+!p2@SP140!1.35!21.20!SP140;;chr19:12998003..12998021,-!p1@KLF1!1.34!20.96!KLF1;;chr3:187463179..187463201,-!p2@BCL6!1.33!82.90!BCL6;;chr2:192015750..192015793,-!p2@STAT4!1.33!27.16!STAT4;;chr4:185395633..185395651,-!p2@IRF2!1.30!30.49!IRF2;;chr6:144385698..144385742,-!p2@PLAGL1!1.30!23.11!PLAGL1;;chr19:16435625..16435682,+!p1@KLF2!1.29!573.19!KLF2;;chr10:111985713..111985774,+!p2@MXI1!1.29!171.77!MXI1;;chr10:51585430..51585448,+!p7@NCOA4!1.28!18.11!NCOA4;;chr7:50344251..50344288,+!p3@IKZF1!1.28!17.87!IKZF1;;chr3:71355163..71355209,-!p5@FOXP1!1.27!24.30!FOXP1;;chrX:48644984..48645005,+!p1@GATA1!1.25!16.68!GATA1;;chr12:54689552..54689574,-!p6@NFE2!1.25!16.68!NFE2;;chr11:47400045..47400060,-!p6@SPI1!1.24!16.44!SPI1;;chr2:100759037..100759058,-!p2@AFF3!1.24!16.20!AFF3;;chrX:106960285..106960299,-!p1@TSC22D3!1.23!422.15!TSC22D3;;chr11:128563948..128564003,+!p1@FLI1!1.23!190.35!FLI1;;chr13:41593425..41593480,-!p1@ELF1!1.23!100.53!ELF1;;chr11:47400032..47400043,-!p5@SPI1!1.22!15.72!SPI1;;chr11:47399947..47399961,-!p3@SPI1!1.22!15.49!SPI1;;chr3:71542615..71542644,-!p12@FOXP1!1.22!15.49!FOXP1;;chr6:106546808..106546833,+!p3@PRDM1!1.21!19.06!PRDM1;;chr7:28725740..28725778,+!p1@CREB5!1.19!127.69!CREB5;;chr2:70167296..70167306,+!p3@MXD1!1.19!22.16!MXD1;;chr14:75988771..75988826,+!p1@BATF!1.19!19.30!BATF;;chr7:50343895..50343936,+!p5@IKZF1!1.19!14.53!IKZF1;;chr5:88178983..88179012,-!p1@MEF2C!1.18!107.20!MEF2C;;chr3:18486354..18486377,-!p2@SATB1!1.18!17.63!SATB1;;chr17:38020392..38020477,-!p1@IKZF3!1.18!14.06!IKZF3;;chr2:208031943..208031978,-!p5@KLF7!1.17!18.34!KLF7;;chr6:91006518..91006570,-!p1@BACH2!1.16!30.73!BACH2;;chr5:176735063..176735088,-!p2@MXD3!1.16!13.34!MXD3;;chr16:3313791..3313834,+!p2@ZNF263!1.14!28.35!ZNF263;;chr4:106068026..106068084,+!p1@TET2!1.13!113.16!TET2;;chr15:60884706..60884743,-!p1@RORA!1.13!64.08!RORA;;chr11:128392273..128392308,-!p2@ETS1!1.13!52.65!ETS1;;chr4:185395191..185395226,-!p4@IRF2!1.13!17.63!IRF2;;chr5:133451347..133451358,+!p3@TCF7!1.13!12.39!TCF7;;chr1:47697965..47697991,-!p7@TAL1!1.13!12.39!TAL1;;chr21:36421535..36421610,-!p2@RUNX1!1.12!43.83!RUNX1;;chr16:88752889..88752921,-!p1@SNAI3!1.12!14.29!SNAI3;;chr4:109090075..109090095,-!p2@LEF1!1.12!12.15!LEF1;;chrX:131574281..131574293,-!p18@MBNL3!1.12!12.15!MBNL3;;chr10:111967345..111967422,+!p1@MXI1!1.11!191.54!MXI1;;chr5:142782823..142782854,-!p3@NR3C1!1.11!17.15!NR3C1;;chr5:131826457..131826514,-!p1@IRF1!1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| |expression_enrichment_score=chrX:131623044..131623089,-!p1@MBNL3!2.73!2090.96!MBNL3;;chr11:47400078..47400106,-!p1@SPI1!2.48!301.60!SPI1;;chr12:54694653..54694672,-!p2@NFE2!2.29!193.44!NFE2;;chrX:131623026..131623039,-!p5@MBNL3!2.26!180.58!MBNL3;;chr2:68592406..68592424,+!p1@PLEK!2.25!177.01!PLEK;;chrX:131622958..131622978,-!p3@MBNL3!2.17!184.39!MBNL3;;chrX:131622988..131623006,-!p8@MBNL3!2.14!137.94!MBNL3;;chr12:54694758..54694805,-!p1@NFE2!2.13!159.14!NFE2;;chrX:70315688..70315709,+!p1@FOXO4!1.96!200.83!FOXO4;;chr7:28220506..28220552,-!p3@JAZF1!1.86!71.23!JAZF1;;chr12:54694807..54694832,-!p3@NFE2!1.85!69.33!NFE2;;chr2:70142232..70142251,+!p1@MXD1!1.84!368.54!MXD1;;chr7:28220354..28220441,-!p1@JAZF1!1.83!967.70!JAZF1;;chr16:85932760..85932775,+!p1@IRF8!1.76!56.22!IRF8;;chr5:133451294..133451310,+!p2@TCF7!1.76!55.98!TCF7;;chr10:51572408..51572454,+!p3@NCOA4!1.74!298.98!NCOA4;;chr7:50343634..50343717,+!p2@IKZF1!1.72!50.98!IKZF1;;chr3:128212033..128212051,-!p1@GATA2!1.71!50.51!GATA2;;chr10:51572339..51572376,+!p4@NCOA4!1.70!106.97!NCOA4;;chr17:45810594..45810608,+!p1@TBX21!1.69!48.36!TBX21;;chr4:109087445..109087463,-!p1@LEF1!1.67!45.98!LEF1;;chr7:50344289..50344323,+!p1@IKZF1!1.66!45.03!IKZF1;;chr9:117150254..117150271,-!p1@AKNA!1.65!114.35!AKNA;;chr10:51585449..51585487,+!p6@NCOA4!1.63!41.45!NCOA4;;chr2:231090433..231090469,+!p1@SP140!1.61!39.31!SP140;;chr1:25256756..25256774,-!p1@RUNX3!1.54!61.94!RUNX3;;chr3:141748010..141748030,-!p8@TFDP2!1.54!33.35!TFDP2;;chr3:63953435..63953499,+!p1@ATXN7!1.53!32.64!ATXN7;;chr17:37934365..37934387,-!p2@IKZF3!1.53!32.64!IKZF3;;chr2:148778973..148779035,+!p3@MBD5!1.51!78.62!MBD5;;chr19:50922187..50922204,+!p1@SPIB!1.51!31.21!SPIB;;chr2:100759010..100759035,-!p1@AFF3!1.50!30.49!AFF3;;chr6:391743..391759,+!p1@IRF4!1.49!29.78!IRF4;;chr20:56195474..56195506,-!p1@ZBP1!1.47!28.35!ZBP1;;chr5:133450365..133450444,+!p1@TCF7!1.46!121.74!TCF7;;chr11:111249993..111250006,-!p1@POU2AF1!1.46!28.11!POU2AF1;;chrY:21906594..21906622,-!p1@KDM5D!1.46!27.87!KDM5D;;chr3:27763807..27763822,-!p1@EOMES!1.45!26.92!EOMES;;chr2:192015701..192015743,-!p1@STAT4!1.43!35.50!STAT4;;chr11:47400062..47400077,-!p2@SPI1!1.43!25.73!SPI1;;chr19:13213511..13213545,-!p2@LYL1!1.41!26.92!LYL1;;chr21:34442439..34442455,+!p1@OLIG1!1.41!24.78!OLIG1;;chr12:54778471..54778528,-!p1@ZNF385A!1.40!24.06!ZNF385A;;chr20:50159198..50159299,-!p1@NFATC2!1.38!33.11!NFATC2;;chr2:68592394..68592405,+!p2@PLEK!1.37!22.63!PLEK;;chr7:28725715..28725727,+!p3@CREB5!1.36!25.97!CREB5;;chr11:47399996..47400014,-!p4@SPI1!1.36!22.16!SPI1;;chr2:231090471..231090504,+!p2@SP140!1.35!21.20!SP140;;chr19:12998003..12998021,-!p1@KLF1!1.34!20.96!KLF1;;chr3:187463179..187463201,-!p2@BCL6!1.33!82.90!BCL6;;chr2:192015750..192015793,-!p2@STAT4!1.33!27.16!STAT4;;chr4:185395633..185395651,-!p2@IRF2!1.30!30.49!IRF2;;chr6:144385698..144385742,-!p2@PLAGL1!1.30!23.11!PLAGL1;;chr19:16435625..16435682,+!p1@KLF2!1.29!573.19!KLF2;;chr10:111985713..111985774,+!p2@MXI1!1.29!171.77!MXI1;;chr10:51585430..51585448,+!p7@NCOA4!1.28!18.11!NCOA4;;chr7:50344251..50344288,+!p3@IKZF1!1.28!17.87!IKZF1;;chr3:71355163..71355209,-!p5@FOXP1!1.27!24.30!FOXP1;;chrX:48644984..48645005,+!p1@GATA1!1.25!16.68!GATA1;;chr12:54689552..54689574,-!p6@NFE2!1.25!16.68!NFE2;;chr11:47400045..47400060,-!p6@SPI1!1.24!16.44!SPI1;;chr2:100759037..100759058,-!p2@AFF3!1.24!16.20!AFF3;;chrX:106960285..106960299,-!p1@TSC22D3!1.23!422.15!TSC22D3;;chr11:128563948..128564003,+!p1@FLI1!1.23!190.35!FLI1;;chr13:41593425..41593480,-!p1@ELF1!1.23!100.53!ELF1;;chr11:47400032..47400043,-!p5@SPI1!1.22!15.72!SPI1;;chr11:47399947..47399961,-!p3@SPI1!1.22!15.49!SPI1;;chr3:71542615..71542644,-!p12@FOXP1!1.22!15.49!FOXP1;;chr6:106546808..106546833,+!p3@PRDM1!1.21!19.06!PRDM1;;chr7:28725740..28725778,+!p1@CREB5!1.19!127.69!CREB5;;chr2:70167296..70167306,+!p3@MXD1!1.19!22.16!MXD1;;chr14:75988771..75988826,+!p1@BATF!1.19!19.30!BATF;;chr7:50343895..50343936,+!p5@IKZF1!1.19!14.53!IKZF1;;chr5:88178983..88179012,-!p1@MEF2C!1.18!107.20!MEF2C;;chr3:18486354..18486377,-!p2@SATB1!1.18!17.63!SATB1;;chr17:38020392..38020477,-!p1@IKZF3!1.18!14.06!IKZF3;;chr2:208031943..208031978,-!p5@KLF7!1.17!18.34!KLF7;;chr6:91006518..91006570,-!p1@BACH2!1.16!30.73!BACH2;;chr5:176735063..176735088,-!p2@MXD3!1.16!13.34!MXD3;;chr16:3313791..3313834,+!p2@ZNF263!1.14!28.35!ZNF263;;chr4:106068026..106068084,+!p1@TET2!1.13!113.16!TET2;;chr15:60884706..60884743,-!p1@RORA!1.13!64.08!RORA;;chr11:128392273..128392308,-!p2@ETS1!1.13!52.65!ETS1;;chr4:185395191..185395226,-!p4@IRF2!1.13!17.63!IRF2;;chr5:133451347..133451358,+!p3@TCF7!1.13!12.39!TCF7;;chr1:47697965..47697991,-!p7@TAL1!1.13!12.39!TAL1;;chr21:36421535..36421610,-!p2@RUNX1!1.12!43.83!RUNX1;;chr16:88752889..88752921,-!p1@SNAI3!1.12!14.29!SNAI3;;chr4:109090075..109090095,-!p2@LEF1!1.12!12.15!LEF1;;chrX:131574281..131574293,-!p18@MBNL3!1.12!12.15!MBNL3;;chr10:111967345..111967422,+!p1@MXI1!1.11!191.54!MXI1;;chr5:142782823..142782854,-!p3@NR3C1!1.11!17.15!NR3C1;;chr5:131826457..131826514,-!p1@IRF1!1.09!446.21!IRF1;;chr12:54689532..54689551,-!p4@NFE2!1.09!11.20!NFE2;;chr1:8484007..8484061,-!p13@RERE!1.08!14.06!RERE;;chr17:38020557..38020572,-!p4@IKZF3!1.08!10.96!IKZF3;;chr19:13213662..13213686,-!p1@LYL1!1.07!15.96!LYL1;;chr9:135854091..135854159,+!p1@GFI1B!1.07!10.72!GFI1B;;chr20:56195525..56195556,-!p2@ZBP1!1.06!10.48!ZBP1;;chr7:115670804..115670825,-!p1@TFEC!1.06!10.48!TFEC;;chr7:50348268..50348366,+!p4@IKZF1!1.06!10.48!IKZF1;;chr10:51565239..51565263,+!p2@NCOA4!1.05!242.52!NCOA4;;chr2:145277640..145277771,-!p1@ZEB2!1.05!138.89!ZEB2;;chr2:70142189..70142223,+!p2@MXD1!1.05!74.09!MXD1;;chr17:17721569..17721574,-!p9@SREBF1!1.05!10.24!SREBF1;;chr12:53835425..53835437,+!p4@PRR13,p5@PCBP2!1.04!16.44!PCBP2;;chr1:43148855..43148908,+!p4@YBX1!1.04!15.72!YBX1;;chr4:185395590..185395627,-!p3@IRF2!1.04!12.39!IRF2;;chr17:38497662..38497713,+!p4@RARA!1.04!11.67!RARA;;chr12:54694738..54694749,-!p5@NFE2!1.04!10.01!NFE2;;chr7:149470641..149470694,-!p1@ZNF467!1.03!44.55!ZNF467;;chr10:8096631..8096660,+!p1@GATA3!1.03!11.67!GATA3;;chr6:106546731..106546755,+!p5@PRDM1!1.03!9.77!PRDM1;;chr1:23857325..23857416,-!p2@E2F2!1.02!11.20!E2F2;;chr19:19779619..19779670,+!p1@ZNF101!1.01!26.68!ZNF101;;chr17:38020516..38020544,-!p5@IKZF3!1.01!9.29!IKZF3;;chr12:10875831..10876025,-!p1@CSDA!1.00!759.01!CSDA;;chr3:18480217..18480239,-!p3@SATB1!1.00!9.05!SATB1;;chr10:8096772..8096787,+!p2@GATA3!0.99!10.48!GATA3;;chr2:231084659..231084721,-!p1@SP110!0.98!206.55!SP110;;chr1:26697243..26697258,-!p1@ZNF683!0.98!8.58!ZNF683;;chr2:60780607..60780624,-!p2@BCL11A!0.97!25.97!BCL11A;;chr9:37034186..37034216,-!p2@PAX5!0.97!8.34!PAX5;;chr12:54691711..54691725,-!p7@NFE2!0.96!8.10!NFE2;;chr3:71179699..71179744,-!p2@FOXP1!0.95!60.75!FOXP1;;chr19:56146352..56146420,+!p2@ZNF580,p2@ZNF581!0.95!53.60!ZNF580;;chr3:141820622..141820635,-!p5@TFDP2!0.95!14.53!TFDP2;;chrY:2803415..2803468,+!p1@ZFY!0.95!7.86!ZFY;;chr9:137217986..137218049,+!p3@RXRA!0.94!22.63!RXRA;;chrX:106960180..106960197,-!p2@TSC22D3!0.92!29.30!TSC22D3;;chr19:42636586..42636607,-!p1@POU2F2!0.92!20.96!POU2F2;;chr9:32550965..32551031,-!p4@TOPORS!0.92!11.67!TOPORS;;chrX:107019163..107019179,-!p7@TSC22D3!0.92!8.58!TSC22D3;;chr1:47697881..47697910,-!p4@TAL1!0.92!7.39!TAL1;;chr21:34442540..34442560,+!p2@OLIG1!0.92!7.39!OLIG1;;chr7:137620650..137620677,-!p3@CREB3L2!0.92!7.39!CREB3L2;;chr9:117160738..117160782,-!p2@AKNA!0.91!30.73!AKNA;;chr5:88179017..88179046,-!p2@MEF2C!0.90!28.83!MEF2C;;chr7:149470540..149470596,-!p2@ZNF467!0.90!9.29!ZNF467;;chr4:109089573..109089585,-!p8@LEF1!0.90!6.91!LEF1;;chr1:47695003..47695042,-!p2@TAL1!0.90!6.91!TAL1;;chr1:92951607..92951661,-!p1@GFI1!0.90!6.91!GFI1;;chr9:117150303..117150312,-!p3@AKNA!0.89!8.81!AKNA;;chr11:128392085..128392232,-!p1@ETS1!0.87!228.94!ETS1;;chr2:28618532..28618610,+!p4@FOSL2!0.87!11.44!FOSL2;;chr3:71542651..71542683,-!p22@FOXP1!0.87!6.43!FOXP1;;chr4:109089901..109089930,-!p3@LEF1!0.87!6.43!LEF1;;chr16:89787937..89787971,+!p1@ZNF276!0.86!17.15!ZNF276;;chr17:37934204..37934241,-!p3@IKZF3!0.86!6.19!IKZF3;;chrY:21906761..21906810,-!p2@KDM5D!0.86!6.19!KDM5D;;chr20:52226313..52226350,-!p3@ZNF217!0.86!6.19!ZNF217;;chr2:100758991..100759009,-!p3@AFF3!0.86!6.19!AFF3;;chr9:88969339..88969422,-!p2@ZCCHC6!0.85!49.79!ZCCHC6;;chr16:79634624..79634642,-!p1@MAF!0.85!25.49!MAF;;chr17:38498402..38498445,+!p3@RARA!0.85!22.87!RARA;;chr4:57522166..57522260,-!p2@HOPX!0.85!7.15!HOPX;;chr4:38665769..38665801,+!p2@KLF3!0.84!57.65!KLF3;;chrX:101186981..101187030,-!p1@ZMAT1!0.84!20.49!ZMAT1;;chrX:49121165..49121179,-!p1@FOXP3!0.84!5.96!FOXP3;;chr5:158526756..158526797,-!p3@EBF1!0.84!5.96!EBF1;;chr6:108881012..108881034,+!p3@FOXO3!0.83!21.92!FOXO3;;chr17:38498594..38498661,+!p2@RARA!0.83!20.49!RARA;;chr6:135516877..135516900,+!p5@MYB!0.83!5.72!MYB;;chr6:15246200..15246214,+!p2@JARID2!0.82!16.44!JARID2;;chr8:60031619..60031676,-!p1@TOX!0.82!12.63!TOX;;chr14:64970670..64970712,-!p3@ZBTB25!0.82!12.63!ZBTB25;;chr10:31288398..31288455,-!p2@ZNF438!0.82!6.67!ZNF438;;chr9:3525727..3525828,-!p2@RFX3!0.81!14.77!RFX3;;chrX:107018836..107018862,-!p8@TSC22D3!0.81!5.48!TSC22D3;;chr14:65568389..65568408,-!p4@MAX!0.81!5.48!MAX;;chr19:13213555..13213568,-!p5@LYL1!0.81!5.48!LYL1;;chr21:36421147..36421193,-!p10@RUNX1!0.81!5.48!RUNX1;;chr1:61548225..61548299,+!p1@NFIA!0.80!75.76!NFIA;;chr16:68119324..68119364,+!p1@NFATC3!0.80!25.49!NFATC3;;chr1:10754477..10754517,-!p1@CASZ1!0.80!9.29!CASZ1;;chr2:113057415..113057477,+!p3@ZC3H6!0.80!7.15!ZC3H6;;chr2:60781201..60781258,-!p3@BCL11A!0.80!5.24!BCL11A;;chr19:45251395..45251432,+!p8@BCL3!0.80!5.24!BCL3;;chr12:6782377..6782382,-!p15@ZNF384!0.80!5.24!ZNF384;;chr8:71316021..71316068,-!p1@NCOA2!0.79!52.17!NCOA2;;chr2:208031542..208031595,-!p2@KLF7!0.79!39.31!KLF7;;chr3:18466787..18466839,-!p1@SATB1!0.79!24.78!SATB1;;chr14:65569101..65569119,-!p3@MAX!0.79!17.39!MAX;;chr19:19729477..19729542,-!p1@PBX4!0.79!11.67!PBX4;;chr6:45390300..45390335,+!p4@RUNX2!0.79!8.34!RUNX2;;chr19:38085768..38085821,+!p1@ZNF540!0.79!8.10!ZNF540;;chr19:53073532..53073551,+!p1@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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000178;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002193;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002390 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Whole%2520blood%2520%2528ribopure%2529%252c%2520donor090325%252c%2520donation1.CNhs11075.12176-128I7.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Whole%2520blood%2520%2528ribopure%2529%252c%2520donor090325%252c%2520donation1.CNhs11075.12176-128I7.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Whole%2520blood%2520%2528ribopure%2529%252c%2520donor090325%252c%2520donation1.CNhs11075.12176-128I7.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Whole%2520blood%2520%2528ribopure%2529%252c%2520donor090325%252c%2520donation1.CNhs11075.12176-128I7.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Whole%2520blood%2520%2528ribopure%2529%252c%2520donor090325%252c%2520donation1.CNhs11075.12176-128I7.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:12176-128I7 | |id=FF:12176-128I7 | ||
|is_a=EFO:0002091;;FF:0000002;;FF: | |is_a=EFO:0002091;;FF:0000002;;FF:0000281 | ||
|is_obsolete= | |||
|library_id=CNhs11075 | |||
|library_id_phase_based=2:CNhs11075 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12176 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12176 | |||
|name=Whole blood (ribopure), donor090325, donation1 | |name=Whole blood (ribopure), donor090325, donation1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 61: | ||
|profile_cagescan=NCig10019,,, | |profile_cagescan=NCig10019,,, | ||
|profile_hcage=CNhs11075,LSID723,release008,COMPLETED | |profile_hcage=CNhs11075,LSID723,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0.529214405324809,0.084611365057381,0,0,0,0,0.0738689340419525,0,0.0133239002068107,-0.282403560576942,0,0,0,0.0773117800149233,0,0,0,0,0,0,0.234186964128339,0,0,-0.0605210656796906,0,0,0,0,0.169222730114762,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0.0464009723343685,0,0,0,0,0,0,0.0999840489457123,0,0,0,0,0,0,0,0,0.0221859512215342,0,0,0,0.742442609301502,0,-0.0119814004214419,0,-0.0969923612426051,0,0,0.136843336915242,0,0,0,0,0,0,0,0,0,0,0.290686032400325,0.0464009723343685,0,0.637013631635573,0,0,0,0,0.13101233739175,0,0,0,0,0,-0.188760613374061,0,0,0,0.0454393420590833,-0.0801850653041195,0,0,0.11709348206417,0,0.136151612890632,-0.138477200800895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0499726215880925,0,0,0,0.0549772574156501,0.297828953026816,0,0,-0.0115773323456413,0,0,0 | |||
|repeat_enrich_byname=0,0,0,0,0.136151612890632,0,0,0.092801944668737,0.234186964128339,0.169222730114762,0,0,0,0,0,0,-0.247178875285564,0,0.3531255042102,-0.0507131978547348,0,0,0.0481871614922989,0,0.169222730114762,0,0,0.092801944668737,0.092801944668737,0,0,0,-0.128119866952565,0,-0.0504125515893149,0,0,0.092801944668737,0,0,-0.0712852667700687,0,0.0388041189106541,0.0244576835913689,0,0,0,0,-0.139228331942575,0,0.34239433672113,-0.0827201683234173,0,-0.515467754366783,0.293869209781199,0,0,0,-0.284917143244716,-0.520884499515704,0,0,0.258606074543391,0.232256242920445,0.092801944668737,0,-0.391044581551635,0,-0.140600231027197,-0.0571240618477218,0,-0.0229758700589428,0,0,0,0,0,0,0,0,0,0,0,-0.0574934668214365,0.43378325591156,0.0057267868408497,0,0,0,0.310268896494515,0,0,-0.373286155956567,-0.181513283182097,0.166323586200433,-0.394980775321991,0,0.62112292378587,0.193956333696799,0.302552030405552,0.0454393420590833,-0.147401849371139,-0.189981719549847,0,-0.188760613374061,-0.552085664985673,-0.000842923416718155,0.0853754990402151,-0.0581228783694288,-1.13860656361837,0.178698862445321,0,0,0,0.488059838839287,0,0,0.00737969940041056,-0.0395382704829514,-0.624586464141345,0.205777476206012,-0.405885201107066,-0.526793539188535,-0.0395325284566706,0.265869115990333,-0.0098561162112905,-0.4215723249037,0,0.811530155647828,0,-0.154014388264707,-0.693110162438585,0.872427936416232,0,0.0747970313048851,0.0244576835913689,0,-0.431080631093609,-0.0413230924372043,0,0,-0.152652870751084,0.092801944668737,0,0.169222730114762,0,0,-0.24980956742729,0.696030262373148,0.509587047745957,0,0.00786030951155635,-0.0474673580816451,0.176471181662252,0,0.22499886813574,0,0.0973840780115163,-0.0744319666106656,0,-0.156076209243659,0.86558975988611,0.0244166011239462,-0.253172075276976,-0.0584468268118252,0.440301330799637,0.014924917136602,-0.18323984474125,-0.0656342959032987,-0.106530202877496,-0.0881268324752877,-0.0463177762767885,-0.297094584672759,0.84732884869556,-0.0208371499645612,-0.0723307520501195,0,0.148403886005197,0,0.113291061687646,0.092801944668737,0.510703123989968,-0.306246787344902,0.863009988377865,0.272753050653725,0,-0.0330595224442285,-0.151117306138401,0,-0.151071637591282,0,0,0.0188556467801224,-0.697695966512583,0.266018954857979,-0.0543780916218138,0,-0.790080158389657,0,0,-0.0917874012778605,0.10519783090919,0,-0.0388003239900423,0.0940833196594474,0.0560304232081198,0.0532516566798276,0,0,-0.645700337992725,0,0,-0.436705333703269,-0.0636048451378017,-0.450560593843872,-0.0191393773584171,0,-0.108622809454255,0,0,-0.00830503585041398,0.947514524029677,0.259256147580353,0,0,-0.203480324264455,-0.116628112990133,0,0.318506815817787,0,0.052623590233006,0,0,0,0.092801944668737,0,0,0,0.404429067955725,-0.0641472978161233,0.092801944668737,-0.0298903981402581,0,0.092801944668737,0,0,0,0.176773261236409,0,0,-0.60045931008825,-0.0114773876060575,-0.12301741567642,0,0.092801944668737,0,0,0.124950466120104,-0.203236562094724,0.092801944668737,-0.131862706497632,0,0.0464009723343685,0,0,0.0830817403255503,0,0,0,0.17033693433679,0.0350714876150731,-0.22985870953414,0,0,0,-0.27695440160179,0,0,0,0,0.196187457203127,0,0,-0.462707443271618,0,0.169648494757618,0.0112200651218956,0,0.122154983416331,0.318212852677453,-1.30962034064846,0,0,-0.261347131789888,0,0,-0.151121229811341,0,0,0,0,0,0.11709348206417,0,0.092801944668737,0,0.398152838171859,0,0,0,0,0,0.092801944668737,0,0,0.092801944668737,0,0,0.13970441345863,-0.0922240566585104,0,0,0,0,0,0,0,0.0605053419784775,0.191446305332358,0,0,0,0,0,0,0,0,0.289345912927287,0,0,0,0,0,-0.0969923612426051,0,0,0,0.169222730114762,-0.564807121153884,0,0,0.0133239002068107,0,0,0,0,0,0,0.0464009723343685,0.0253453249651414,0,0.529214405324809,0,0,0,0.167366946364877,0.145740638185479,0,0.169222730114762,0,0,0,0,0,-0.0406463340777519,0,0,0,0,-0.113884373708977,0,0,0,0.0644263453256052,0,0.0738689340419525,0,0,0,0,0,0.0732633227411748,0,0,0,0,0,0,0,0,0,0,0,0,0.0464009723343685,0,0,-0.433202937650777,0,0,0,0,0,-0.232628352633041,0,0,0,0,0,0,-0.031340424028527,0,0,0,0,0,0,0,0,0,0,0,0,0.13101233739175,0,0,0.0163758308862909,0,0,0,0,0,0,0,0,0,0.171198887647141,0,0,0,0,0,0,0,-0.0979578962680575,0,0,0.109672037321024,0,0,0,0,0,0,-0.241575868322341,-0.283220399823148,-0.0895490951445198,0,0,0,0.0302257925749259,0.742442609301502,0,-0.0329050193664387,0,-0.0667773874189013,0.092801944668737,0,0,0,0,0,0,0,0,0,0,1.45443305464747,0.092801944668737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0605210656796906,0,0,0,0,0.497494413877184,0,0,0,0,0,0,0,0.084611365057381,0,0,0,0,0,0,0,0,0,0,0.11709348206417,0,0,0,0.092801944668737,0,0,0,0,0,0,0,0.111331652924746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0464009723343685,0,0,0,0,0,-0.0800184682686384,0,0,0,0.565272512133424,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0464009723343685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.092801944668737,0,0.0920655469267895,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0482220752390542,0,-0.0843766322300271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| |||
|rna_box=128 | |rna_box=128 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=5.9004 | |rna_weight_ug=5.9004 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;9.60660031157824e-235!GO:0043227;membrane-bound organelle;2.02195762291108e-142!GO:0043231;intracellular membrane-bound organelle;3.2044405660483e-142!GO:0043226;organelle;3.58738369306799e-135!GO:0043229;intracellular organelle;1.3711436610862e-134!GO:0005737;cytoplasm;1.39297075511111e-127!GO:0044444;cytoplasmic part;2.91901905202505e-82!GO:0044422;organelle part;6.26415796559993e-77!GO:0044446;intracellular organelle part;1.45391118210091e-75!GO:0044237;cellular metabolic process;1.33107981848965e-72!GO:0043170;macromolecule metabolic process;1.33107981848965e-72!GO:0005634;nucleus;6.91300029461164e-71!GO:0044238;primary metabolic process;2.52236582008686e-70!GO:0032991;macromolecular complex;1.34131600322953e-68!GO:0005515;protein binding;5.55126711636539e-62!GO:0003723;RNA binding;1.03355001638213e-57!GO:0044428;nuclear part;1.81643068565949e-56!GO:0030529;ribonucleoprotein complex;1.99951194820813e-53!GO:0043283;biopolymer metabolic process;2.58246897839969e-46!GO:0043233;organelle lumen;3.84385211679437e-46!GO:0031974;membrane-enclosed lumen;3.84385211679437e-46!GO:0019538;protein metabolic process;4.41010233127163e-44!GO:0033036;macromolecule localization;1.2053825127476e-43!GO:0015031;protein transport;5.40420093129154e-42!GO:0045184;establishment of protein localization;3.16347618101592e-41!GO:0044267;cellular protein metabolic process;4.20950891244032e-41!GO:0010467;gene expression;5.83888655186851e-41!GO:0044260;cellular macromolecule metabolic process;8.36914389711975e-41!GO:0008104;protein localization;1.63254098641072e-40!GO:0006412;translation;6.80796382081932e-39!GO:0043234;protein complex;2.98156259519003e-36!GO:0006396;RNA processing;4.77635756892197e-36!GO:0031981;nuclear lumen;4.77635756892197e-36!GO:0005829;cytosol;3.22894658335008e-35!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.27107505118123e-35!GO:0016071;mRNA metabolic process;8.89434313629189e-35!GO:0005739;mitochondrion;7.47911047863495e-31!GO:0031090;organelle membrane;3.93168787292054e-30!GO:0008380;RNA splicing;5.87779064117201e-30!GO:0006397;mRNA processing;1.0633140767483e-29!GO:0009059;macromolecule biosynthetic process;1.03407843066654e-28!GO:0005840;ribosome;7.8025535577825e-28!GO:0016043;cellular component organization and biogenesis;3.04512430296919e-27!GO:0046907;intracellular transport;8.96009678699457e-27!GO:0006886;intracellular protein transport;6.77234340772755e-26!GO:0031967;organelle envelope;9.76403195836632e-26!GO:0031975;envelope;1.53076508997783e-25!GO:0005654;nucleoplasm;1.45363688440067e-24!GO:0003735;structural constituent of ribosome;1.65204264316706e-24!GO:0044249;cellular biosynthetic process;2.3193156695775e-24!GO:0009058;biosynthetic process;6.72375864552059e-24!GO:0044445;cytosolic part;1.13456643139119e-23!GO:0006915;apoptosis;1.26237567355925e-23!GO:0012501;programmed cell death;1.74362969853922e-23!GO:0065003;macromolecular complex assembly;7.24251216540183e-23!GO:0033279;ribosomal subunit;2.18221327547987e-22!GO:0008219;cell death;2.20331598949616e-22!GO:0016265;death;2.20331598949616e-22!GO:0044429;mitochondrial part;4.61496952127086e-22!GO:0003676;nucleic acid binding;7.07812651464587e-22!GO:0005681;spliceosome;1.72801990234553e-21!GO:0051641;cellular localization;2.29684538214764e-21!GO:0000166;nucleotide binding;2.30097083504222e-21!GO:0051649;establishment of cellular localization;2.30097083504222e-21!GO:0016070;RNA metabolic process;6.24816389306986e-21!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.09793348858607e-20!GO:0022607;cellular component assembly;2.79169304835442e-20!GO:0044451;nucleoplasm part;5.58610083916974e-20!GO:0043412;biopolymer modification;3.40135336370991e-19!GO:0006512;ubiquitin cycle;6.76833003563197e-19!GO:0022613;ribonucleoprotein complex biogenesis and assembly;9.32559239782985e-19!GO:0006259;DNA metabolic process;3.81609289069558e-18!GO:0008134;transcription factor binding;8.36852652436216e-18!GO:0006464;protein modification process;2.33246646251943e-17!GO:0044265;cellular macromolecule catabolic process;7.78981895529547e-17!GO:0042981;regulation of apoptosis;1.11984611417509e-16!GO:0032553;ribonucleotide binding;1.48681144813037e-16!GO:0032555;purine ribonucleotide binding;1.48681144813037e-16!GO:0002376;immune system process;1.48681144813037e-16!GO:0006996;organelle organization and biogenesis;2.25246113275736e-16!GO:0043067;regulation of programmed cell death;2.65124997927701e-16!GO:0043687;post-translational protein modification;3.97209012244622e-16!GO:0016874;ligase activity;6.06456968672556e-16!GO:0005740;mitochondrial envelope;6.53324676934718e-16!GO:0016462;pyrophosphatase activity;7.8865067155906e-16!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;9.14327304755956e-16!GO:0017076;purine nucleotide binding;1.02276360829695e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;1.10785162127793e-15!GO:0006119;oxidative phosphorylation;1.25465293461952e-15!GO:0017111;nucleoside-triphosphatase activity;1.62380636790641e-15!GO:0016604;nuclear body;3.1108842062507e-15!GO:0031966;mitochondrial membrane;3.1506987734678e-15!GO:0016192;vesicle-mediated transport;6.35299731922059e-15!GO:0019866;organelle inner membrane;1.01040528406733e-14!GO:0050794;regulation of cellular process;1.0404370658489e-14!GO:0022618;protein-RNA complex assembly;1.54902159782651e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;1.55822983557388e-14!GO:0019941;modification-dependent protein catabolic process;1.75093678415824e-14!GO:0043632;modification-dependent macromolecule catabolic process;1.75093678415824e-14!GO:0006511;ubiquitin-dependent protein catabolic process;2.56230593561978e-14!GO:0044257;cellular protein catabolic process;4.12444869893655e-14!GO:0006913;nucleocytoplasmic transport;8.61811997028947e-14!GO:0006605;protein targeting;1.22092173782378e-13!GO:0043285;biopolymer catabolic process;1.75385510900219e-13!GO:0051169;nuclear transport;1.84131909620565e-13!GO:0005743;mitochondrial inner membrane;6.85203334752461e-13!GO:0016607;nuclear speck;8.34317053910441e-13!GO:0005524;ATP binding;8.4665600310523e-13!GO:0032559;adenyl ribonucleotide binding;1.57461144141039e-12!GO:0009057;macromolecule catabolic process;1.75658249341057e-12!GO:0015935;small ribosomal subunit;1.86243875145702e-12!GO:0007243;protein kinase cascade;1.98455628202083e-12!GO:0048770;pigment granule;2.75882794776047e-12!GO:0042470;melanosome;2.75882794776047e-12!GO:0012505;endomembrane system;6.10229559691206e-12!GO:0007249;I-kappaB kinase/NF-kappaB cascade;7.77850828661866e-12!GO:0005794;Golgi apparatus;8.39402888344502e-12!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;8.51582514472174e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);9.42217764464738e-12!GO:0006793;phosphorus metabolic process;9.81640502883885e-12!GO:0006796;phosphate metabolic process;9.81640502883885e-12!GO:0008135;translation factor activity, nucleic acid binding;1.11461713135738e-11!GO:0030554;adenyl nucleotide binding;1.1277429717284e-11!GO:0003712;transcription cofactor activity;2.07067065969883e-11!GO:0007242;intracellular signaling cascade;2.33122905655579e-11!GO:0006955;immune response;2.38910787615698e-11!GO:0044248;cellular catabolic process;3.30423676110682e-11!GO:0005730;nucleolus;4.01532906785263e-11!GO:0005635;nuclear envelope;5.3755577323525e-11!GO:0051246;regulation of protein metabolic process;6.29027546038777e-11!GO:0015934;large ribosomal subunit;7.79594959493433e-11!GO:0050789;regulation of biological process;8.54627553449367e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;8.63259607195913e-11!GO:0000375;RNA splicing, via transesterification reactions;8.63259607195913e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;8.63259607195913e-11!GO:0005768;endosome;8.89656126611304e-11!GO:0016310;phosphorylation;1.00441044738774e-10!GO:0000502;proteasome complex (sensu Eukaryota);1.17346541365244e-10!GO:0008639;small protein conjugating enzyme activity;1.20864150728221e-10!GO:0006457;protein folding;1.72730488151599e-10!GO:0043228;non-membrane-bound organelle;1.75375976073907e-10!GO:0043232;intracellular non-membrane-bound organelle;1.75375976073907e-10!GO:0006325;establishment and/or maintenance of chromatin architecture;1.75736890907978e-10!GO:0004842;ubiquitin-protein ligase activity;2.23044984650594e-10!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.57567014375213e-10!GO:0044455;mitochondrial membrane part;2.96909758984429e-10!GO:0048193;Golgi vesicle transport;3.69539906735121e-10!GO:0019222;regulation of metabolic process;3.96115494927199e-10!GO:0019787;small conjugating protein ligase activity;3.96115494927199e-10!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);4.47338598570355e-10!GO:0030163;protein catabolic process;4.73284397126527e-10!GO:0051186;cofactor metabolic process;6.5946698470254e-10!GO:0006323;DNA packaging;7.39249530998861e-10!GO:0005746;mitochondrial respiratory chain;1.34879075705601e-09!GO:0003743;translation initiation factor activity;1.78950453778965e-09!GO:0031965;nuclear membrane;2.43584979671622e-09!GO:0016568;chromatin modification;2.90847358434525e-09!GO:0043069;negative regulation of programmed cell death;3.41717781718517e-09!GO:0017038;protein import;3.47396814894173e-09!GO:0016887;ATPase activity;3.67488759562269e-09!GO:0065009;regulation of a molecular function;4.27345523376403e-09!GO:0043066;negative regulation of apoptosis;4.47711090395503e-09!GO:0006916;anti-apoptosis;6.28776246945277e-09!GO:0006974;response to DNA damage stimulus;6.53260718760617e-09!GO:0050136;NADH dehydrogenase (quinone) activity;6.59691698626074e-09!GO:0003954;NADH dehydrogenase activity;6.59691698626074e-09!GO:0008137;NADH dehydrogenase (ubiquinone) activity;6.59691698626074e-09!GO:0042623;ATPase activity, coupled;7.06575386504962e-09!GO:0006413;translational initiation;7.06575386504962e-09!GO:0051276;chromosome organization and biogenesis;7.18534636423582e-09!GO:0005773;vacuole;7.87615097333467e-09!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;8.11991785873909e-09!GO:0048523;negative regulation of cellular process;8.15591949230913e-09!GO:0006366;transcription from RNA polymerase II promoter;8.31048659753276e-09!GO:0031980;mitochondrial lumen;9.2756981571336e-09!GO:0005759;mitochondrial matrix;9.2756981571336e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.02201468982323e-08!GO:0006446;regulation of translational initiation;1.41878115762173e-08!GO:0065007;biological regulation;1.56893147385802e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.63246706043031e-08!GO:0019829;cation-transporting ATPase activity;3.28709026506345e-08!GO:0003713;transcription coactivator activity;4.30929006417847e-08!GO:0016881;acid-amino acid ligase activity;4.63148874502329e-08!GO:0009259;ribonucleotide metabolic process;5.56809284401602e-08!GO:0042775;organelle ATP synthesis coupled electron transport;5.58277005591037e-08!GO:0042773;ATP synthesis coupled electron transport;5.58277005591037e-08!GO:0000323;lytic vacuole;5.66169240210942e-08!GO:0005764;lysosome;5.66169240210942e-08!GO:0051170;nuclear import;6.70121618040148e-08!GO:0004386;helicase activity;7.63225348530214e-08!GO:0005770;late endosome;8.31165702758287e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;8.49405709507792e-08!GO:0006606;protein import into nucleus;9.13378509684863e-08!GO:0009150;purine ribonucleotide metabolic process;9.37625491209095e-08!GO:0044453;nuclear membrane part;9.8292561621585e-08!GO:0051082;unfolded protein binding;1.03337504501085e-07!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.09961580820009e-07!GO:0031323;regulation of cellular metabolic process;1.25065002001943e-07!GO:0006163;purine nucleotide metabolic process;1.42761961312022e-07!GO:0030964;NADH dehydrogenase complex (quinone);1.42761961312022e-07!GO:0045271;respiratory chain complex I;1.42761961312022e-07!GO:0005747;mitochondrial respiratory chain complex I;1.42761961312022e-07!GO:0006950;response to stress;1.8186223342917e-07!GO:0043065;positive regulation of apoptosis;1.82799682071148e-07!GO:0045321;leukocyte activation;1.89375520161354e-07!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.53310068836751e-07!GO:0048519;negative regulation of biological process;2.57990560821904e-07!GO:0008026;ATP-dependent helicase activity;2.61879206964573e-07!GO:0016787;hydrolase activity;2.78169808203381e-07!GO:0005783;endoplasmic reticulum;2.78636281010094e-07!GO:0009152;purine ribonucleotide biosynthetic process;2.97982702853389e-07!GO:0043068;positive regulation of programmed cell death;3.37936814987586e-07!GO:0015986;ATP synthesis coupled proton transport;3.39064283593824e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.39064283593824e-07!GO:0050657;nucleic acid transport;3.93488583161054e-07!GO:0051236;establishment of RNA localization;3.93488583161054e-07!GO:0050658;RNA transport;3.93488583161054e-07!GO:0016772;transferase activity, transferring phosphorus-containing groups;3.94942085501335e-07!GO:0032446;protein modification by small protein conjugation;4.20910633022551e-07!GO:0007264;small GTPase mediated signal transduction;4.62209088507852e-07!GO:0006164;purine nucleotide biosynthetic process;4.70827564079849e-07!GO:0006403;RNA localization;5.13291048804994e-07!GO:0006281;DNA repair;5.36411837909648e-07!GO:0006417;regulation of translation;5.4487121374676e-07!GO:0009260;ribonucleotide biosynthetic process;5.60997759196152e-07!GO:0006917;induction of apoptosis;6.29226661465232e-07!GO:0019899;enzyme binding;6.95499345974193e-07!GO:0001772;immunological synapse;7.16851333348801e-07!GO:0007049;cell cycle;7.463355400629e-07!GO:0046649;lymphocyte activation;9.02006292152659e-07!GO:0016567;protein ubiquitination;9.08791098580392e-07!GO:0008565;protein transporter activity;9.44874961793103e-07!GO:0012502;induction of programmed cell death;1.06426505740543e-06!GO:0016563;transcription activator activity;1.10879499863517e-06!GO:0044440;endosomal part;1.1162474560615e-06!GO:0010008;endosome membrane;1.1162474560615e-06!GO:0006732;coenzyme metabolic process;1.12211005729735e-06!GO:0001775;cell activation;1.44245374830985e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.47046562488562e-06!GO:0009144;purine nucleoside triphosphate metabolic process;1.47046562488562e-06!GO:0043566;structure-specific DNA binding;1.55630443983741e-06!GO:0003924;GTPase activity;1.6053880374692e-06!GO:0009199;ribonucleoside triphosphate metabolic process;1.66767451227063e-06!GO:0005643;nuclear pore;1.75551070334895e-06!GO:0046034;ATP metabolic process;2.17493863129536e-06!GO:0005525;GTP binding;2.17493863129536e-06!GO:0006461;protein complex assembly;2.40086868557753e-06!GO:0009615;response to virus;2.6311389578471e-06!GO:0002764;immune response-regulating signal transduction;2.75063033509643e-06!GO:0051188;cofactor biosynthetic process;2.94342543831632e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;3.11929751440669e-06!GO:0009967;positive regulation of signal transduction;3.32363680177733e-06!GO:0009141;nucleoside triphosphate metabolic process;3.56314985451907e-06!GO:0008632;apoptotic program;3.71175798837092e-06!GO:0010468;regulation of gene expression;3.71175798837092e-06!GO:0016469;proton-transporting two-sector ATPase complex;3.75504294626635e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.85596168503533e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.85596168503533e-06!GO:0005839;proteasome core complex (sensu Eukaryota);3.91314782155856e-06!GO:0000151;ubiquitin ligase complex;3.99371003749215e-06!GO:0060090;molecular adaptor activity;4.13265383438292e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;4.25253247026701e-06!GO:0015078;hydrogen ion transmembrane transporter activity;4.26652128603556e-06!GO:0009142;nucleoside triphosphate biosynthetic process;4.44004027709855e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;4.44004027709855e-06!GO:0006754;ATP biosynthetic process;4.44004027709855e-06!GO:0006753;nucleoside phosphate metabolic process;4.44004027709855e-06!GO:0048522;positive regulation of cellular process;4.92118460942075e-06!GO:0002757;immune response-activating signal transduction;5.37692079446715e-06!GO:0050790;regulation of catalytic activity;6.05600790306385e-06!GO:0031326;regulation of cellular biosynthetic process;6.46804583172794e-06!GO:0051028;mRNA transport;6.83003385152334e-06!GO:0005793;ER-Golgi intermediate compartment;6.95808791391703e-06!GO:0002768;immune response-regulating cell surface receptor signaling pathway;7.13493524589913e-06!GO:0005774;vacuolar membrane;7.25943093793034e-06!GO:0009056;catabolic process;7.37654672577479e-06!GO:0008047;enzyme activator activity;7.5352195174682e-06!GO:0006333;chromatin assembly or disassembly;9.42533421222851e-06!GO:0042254;ribosome biogenesis and assembly;1.09470653147587e-05!GO:0007265;Ras protein signal transduction;1.22677034929065e-05!GO:0044432;endoplasmic reticulum part;1.37441404890203e-05!GO:0006350;transcription;1.38771794060985e-05!GO:0065004;protein-DNA complex assembly;1.38771794060985e-05!GO:0002429;immune response-activating cell surface receptor signaling pathway;1.42454292600154e-05!GO:0003697;single-stranded DNA binding;1.44974158144349e-05!GO:0051726;regulation of cell cycle;1.54262803245949e-05!GO:0000245;spliceosome assembly;1.61940516546586e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.64334856296987e-05!GO:0000074;regulation of progression through cell cycle;1.68975200738308e-05!GO:0048518;positive regulation of biological process;1.71528665616555e-05!GO:0008270;zinc ion binding;1.95749092737213e-05!GO:0005765;lysosomal membrane;2.06157769716328e-05!GO:0016740;transferase activity;2.12768580173749e-05!GO:0032561;guanyl ribonucleotide binding;2.22266683429269e-05!GO:0019001;guanyl nucleotide binding;2.22266683429269e-05!GO:0009889;regulation of biosynthetic process;2.2610596347352e-05!GO:0004674;protein serine/threonine kinase activity;2.29678953955126e-05!GO:0004298;threonine endopeptidase activity;2.47685022814848e-05!GO:0006888;ER to Golgi vesicle-mediated transport;2.58772685079407e-05!GO:0009719;response to endogenous stimulus;2.66348704363904e-05!GO:0046930;pore complex;2.67097346868735e-05!GO:0048475;coated membrane;2.7116511997154e-05!GO:0030117;membrane coat;2.7116511997154e-05!GO:0006401;RNA catabolic process;2.75951621978686e-05!GO:0030532;small nuclear ribonucleoprotein complex;2.81488439110417e-05!GO:0030097;hemopoiesis;2.81488439110417e-05!GO:0031324;negative regulation of cellular metabolic process;2.89437664148456e-05!GO:0030695;GTPase regulator activity;2.98115032875972e-05!GO:0044437;vacuolar part;3.18811204473924e-05!GO:0030120;vesicle coat;3.23664572210121e-05!GO:0030662;coated vesicle membrane;3.23664572210121e-05!GO:0016197;endosome transport;3.59789563977509e-05!GO:0016564;transcription repressor activity;3.59789563977509e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;3.92659018235086e-05!GO:0031902;late endosome membrane;4.00731510038495e-05!GO:0044431;Golgi apparatus part;4.11646053254258e-05!GO:0009060;aerobic respiration;4.3192744272632e-05!GO:0065002;intracellular protein transport across a membrane;4.70675221707058e-05!GO:0009892;negative regulation of metabolic process;4.78807085494374e-05!GO:0051168;nuclear export;4.78807085494374e-05!GO:0006613;cotranslational protein targeting to membrane;4.84438923588946e-05!GO:0042110;T cell activation;4.84438923588946e-05!GO:0005761;mitochondrial ribosome;5.41652836451637e-05!GO:0000313;organellar ribosome;5.41652836451637e-05!GO:0009117;nucleotide metabolic process;5.54303187732522e-05!GO:0003724;RNA helicase activity;5.91210315687351e-05!GO:0045786;negative regulation of progression through cell cycle;5.92451999109418e-05!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.5583516537051e-05!GO:0032940;secretion by cell;7.08673044348062e-05!GO:0045259;proton-transporting ATP synthase complex;8.41303476252006e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;8.64414230235593e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;8.89448566947448e-05!GO:0016481;negative regulation of transcription;9.56591589629375e-05!GO:0051336;regulation of hydrolase activity;9.99319830806135e-05!GO:0031252;leading edge;0.000100579918824428!GO:0005789;endoplasmic reticulum membrane;0.000101479583177039!GO:0042101;T cell receptor complex;0.000110355009298959!GO:0005070;SH3/SH2 adaptor activity;0.000122242277786176!GO:0046914;transition metal ion binding;0.000133215689099721!GO:0009966;regulation of signal transduction;0.000134493188391168!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000138752060846696!GO:0005083;small GTPase regulator activity;0.00013948641191798!GO:0002520;immune system development;0.000147184585526176!GO:0031982;vesicle;0.000180413908188307!GO:0051251;positive regulation of lymphocyte activation;0.00018682761699241!GO:0009108;coenzyme biosynthetic process;0.000193802315690664!GO:0005694;chromosome;0.000195025495022545!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000196641758906045!GO:0005885;Arp2/3 protein complex;0.000199437951876759!GO:0030218;erythrocyte differentiation;0.000209640770916129!GO:0006752;group transfer coenzyme metabolic process;0.000238903901331433!GO:0006402;mRNA catabolic process;0.000241857682814725!GO:0005057;receptor signaling protein activity;0.00025176112533984!GO:0022402;cell cycle process;0.000266297745350482!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.000271296955710834!GO:0004812;aminoacyl-tRNA ligase activity;0.000271296955710834!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.000271296955710834!GO:0000785;chromatin;0.0002736820287931!GO:0045333;cellular respiration;0.000274057418095639!GO:0005096;GTPase activator activity;0.000309618770565029!GO:0006399;tRNA metabolic process;0.000312279561156851!GO:0050851;antigen receptor-mediated signaling pathway;0.000314995683972624!GO:0016044;membrane organization and biogenesis;0.000323768119957183!GO:0009055;electron carrier activity;0.000338266693949863!GO:0016779;nucleotidyltransferase activity;0.000391442209712222!GO:0045045;secretory pathway;0.000404388898348279!GO:0008654;phospholipid biosynthetic process;0.000412104007015221!GO:0016072;rRNA metabolic process;0.000425794083476937!GO:0016363;nuclear matrix;0.00043395840421435!GO:0005798;Golgi-associated vesicle;0.000478560692368666!GO:0043038;amino acid activation;0.000478560692368666!GO:0006418;tRNA aminoacylation for protein translation;0.000478560692368666!GO:0043039;tRNA aminoacylation;0.000478560692368666!GO:0006612;protein targeting to membrane;0.000488441808111342!GO:0006364;rRNA processing;0.000513184854428729!GO:0044427;chromosomal part;0.000524634100365724!GO:0045449;regulation of transcription;0.000528606082164811!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00052877025655572!GO:0006650;glycerophospholipid metabolic process;0.000529885431947738!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000542211477790161!GO:0015399;primary active transmembrane transporter activity;0.000542211477790161!GO:0005769;early endosome;0.000613570968546647!GO:0032774;RNA biosynthetic process;0.000614190275870565!GO:0016301;kinase activity;0.000628793123337801!GO:0006351;transcription, DNA-dependent;0.000661835093566924!GO:0031410;cytoplasmic vesicle;0.00066434780937585!GO:0006099;tricarboxylic acid cycle;0.000721178569578262!GO:0046356;acetyl-CoA catabolic process;0.000721178569578262!GO:0008186;RNA-dependent ATPase activity;0.00075998505237494!GO:0030384;phosphoinositide metabolic process;0.000762470166872464!GO:0042113;B cell activation;0.000773301026563695!GO:0001816;cytokine production;0.000830128976796624!GO:0005813;centrosome;0.000842925613314163!GO:0051427;hormone receptor binding;0.000867369686965143!GO:0048534;hemopoietic or lymphoid organ development;0.000888962129554152!GO:0000139;Golgi membrane;0.00101247551654448!GO:0030099;myeloid cell differentiation;0.00108759103604998!GO:0003714;transcription corepressor activity;0.00113220572669378!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00116737632475504!GO:0003690;double-stranded DNA binding;0.00119897368796782!GO:0043492;ATPase activity, coupled to movement of substances;0.00124050586920098!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00125004517825509!GO:0030041;actin filament polymerization;0.00137370248937288!GO:0043087;regulation of GTPase activity;0.00139311712091667!GO:0048468;cell development;0.00139466265999341!GO:0035257;nuclear hormone receptor binding;0.0015030058183557!GO:0018193;peptidyl-amino acid modification;0.00152606452652791!GO:0031988;membrane-bound vesicle;0.00155771161153141!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00158407027959983!GO:0006084;acetyl-CoA metabolic process;0.00160322585948606!GO:0006260;DNA replication;0.00160637367593306!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00171449108494853!GO:0030036;actin cytoskeleton organization and biogenesis;0.00176851944328839!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00180594991837889!GO:0005667;transcription factor complex;0.00186260866744173!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00187035490822404!GO:0006611;protein export from nucleus;0.00191092764120625!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00191188120930156!GO:0006919;caspase activation;0.0020629446880425!GO:0004715;non-membrane spanning protein tyrosine kinase activity;0.00207685120558223!GO:0004004;ATP-dependent RNA helicase activity;0.00211457810489769!GO:0008234;cysteine-type peptidase activity;0.00215197708452199!GO:0006891;intra-Golgi vesicle-mediated transport;0.00215798302332988!GO:0007034;vacuolar transport;0.00230529318992807!GO:0005815;microtubule organizing center;0.00231957470667385!GO:0048471;perinuclear region of cytoplasm;0.00242825680234461!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00247286643394908!GO:0051187;cofactor catabolic process;0.00268600004580247!GO:0046822;regulation of nucleocytoplasmic transport;0.00269080745975424!GO:0006468;protein amino acid phosphorylation;0.00281027313857177!GO:0007005;mitochondrion organization and biogenesis;0.00292931821233826!GO:0008154;actin polymerization and/or depolymerization;0.00305967935203756!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00306798655234835!GO:0015992;proton transport;0.00315267332818175!GO:0043281;regulation of caspase activity;0.00327731849410108!GO:0008624;induction of apoptosis by extracellular signals;0.0033497177012453!GO:0006818;hydrogen transport;0.00337444747892945!GO:0006643;membrane lipid metabolic process;0.00338091464447457!GO:0016023;cytoplasmic membrane-bound vesicle;0.00339428304529051!GO:0003729;mRNA binding;0.00358669981847446!GO:0022890;inorganic cation transmembrane transporter activity;0.00362289744137922!GO:0005741;mitochondrial outer membrane;0.00368322075862949!GO:0043623;cellular protein complex assembly;0.00369659276497164!GO:0016791;phosphoric monoester hydrolase activity;0.00369662471239675!GO:0009109;coenzyme catabolic process;0.00372788262136694!GO:0045892;negative regulation of transcription, DNA-dependent;0.00393422661381126!GO:0004722;protein serine/threonine phosphatase activity;0.00394919722388936!GO:0006355;regulation of transcription, DNA-dependent;0.00398105205061223!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.00428503952427284!GO:0006310;DNA recombination;0.00451875798916626!GO:0031497;chromatin assembly;0.00454479993941246!GO:0006334;nucleosome assembly;0.00457397510258562!GO:0001726;ruffle;0.00457397510258562!GO:0043280;positive regulation of caspase activity;0.00463463703494169!GO:0019843;rRNA binding;0.00476498869543662!GO:0005637;nuclear inner membrane;0.00477001480719992!GO:0051090;regulation of transcription factor activity;0.00494327880195622!GO:0030658;transport vesicle membrane;0.00496751485675278!GO:0050871;positive regulation of B cell activation;0.00502183738466382!GO:0051249;regulation of lymphocyte activation;0.00511334749682888!GO:0003725;double-stranded RNA binding;0.00515132307453108!GO:0002443;leukocyte mediated immunity;0.00517326776174847!GO:0002252;immune effector process;0.0053899967374931!GO:0022415;viral reproductive process;0.00549605004766464!GO:0009607;response to biotic stimulus;0.00555615264552032!GO:0050870;positive regulation of T cell activation;0.00555615264552032!GO:0007050;cell cycle arrest;0.00565730416613599!GO:0050865;regulation of cell activation;0.00591494134050263!GO:0031072;heat shock protein binding;0.00617287394486561!GO:0019904;protein domain specific binding;0.00658548496487372!GO:0046489;phosphoinositide biosynthetic process;0.00672595741304975!GO:0030118;clathrin coat;0.00672825083195689!GO:0001819;positive regulation of cytokine production;0.00672825083195689!GO:0006968;cellular defense response;0.00673110826135279!GO:0030518;steroid hormone receptor signaling pathway;0.00686618364400549!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00691026454091851!GO:0006352;transcription initiation;0.0069302421405838!GO:0019867;outer membrane;0.00718591737959601!GO:0006607;NLS-bearing substrate import into nucleus;0.00723900534317103!GO:0051252;regulation of RNA metabolic process;0.00729263618792155!GO:0050811;GABA receptor binding;0.00750206752942013!GO:0048250;mitochondrial iron ion transport;0.00750564757751343!GO:0046474;glycerophospholipid biosynthetic process;0.00752697679886059!GO:0031968;organelle outer membrane;0.00786646123941162!GO:0051092;activation of NF-kappaB transcription factor;0.00795685303184729!GO:0005099;Ras GTPase activator activity;0.007962717297946!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00830750746246756!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00830750746246756!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00830750746246756!GO:0042802;identical protein binding;0.00838975869584565!GO:0030867;rough endoplasmic reticulum membrane;0.00857864898758388!GO:0043021;ribonucleoprotein binding;0.00871360809589604!GO:0046467;membrane lipid biosynthetic process;0.0087847432072577!GO:0032318;regulation of Ras GTPase activity;0.00902325192051727!GO:0016505;apoptotic protease activator activity;0.00925750360790958!GO:0033116;ER-Golgi intermediate compartment membrane;0.0097782437075307!GO:0030521;androgen receptor signaling pathway;0.00981776752259136!GO:0045058;T cell selection;0.00982098889391723!GO:0009893;positive regulation of metabolic process;0.009866382185888!GO:0016251;general RNA polymerase II transcription factor activity;0.00988038992201115!GO:0019221;cytokine and chemokine mediated signaling pathway;0.00992787217374931!GO:0051223;regulation of protein transport;0.00995738855915434!GO:0000287;magnesium ion binding;0.00997508622070911!GO:0048500;signal recognition particle;0.0101436008127926!GO:0042168;heme metabolic process;0.0103698557177598!GO:0045576;mast cell activation;0.0105341174530945!GO:0007041;lysosomal transport;0.010543238119843!GO:0001817;regulation of cytokine production;0.0108229864841117!GO:0016584;nucleosome positioning;0.0112933180164338!GO:0047485;protein N-terminus binding;0.0113786998682529!GO:0051920;peroxiredoxin activity;0.0116567390260197!GO:0042287;MHC protein binding;0.0118585776146589!GO:0006783;heme biosynthetic process;0.0120679279699271!GO:0000209;protein polyubiquitination;0.0121059900631734!GO:0006778;porphyrin metabolic process;0.0129293017581846!GO:0033013;tetrapyrrole metabolic process;0.0129293017581846!GO:0046456;icosanoid biosynthetic process;0.0130268316918754!GO:0030660;Golgi-associated vesicle membrane;0.0130268316918754!GO:0030258;lipid modification;0.0132691802781744!GO:0002521;leukocyte differentiation;0.0133087979918107!GO:0051098;regulation of binding;0.013390109913242!GO:0006644;phospholipid metabolic process;0.0135413635287985!GO:0005521;lamin binding;0.013630718239512!GO:0008287;protein serine/threonine phosphatase complex;0.0137636240980122!GO:0005791;rough endoplasmic reticulum;0.0142438159105743!GO:0031625;ubiquitin protein ligase binding;0.0145213718960963!GO:0050857;positive regulation of antigen receptor-mediated signaling pathway;0.0147324388491678!GO:0043299;leukocyte degranulation;0.0148958954369308!GO:0001516;prostaglandin biosynthetic process;0.0151639710879461!GO:0046457;prostanoid biosynthetic process;0.0151639710879461!GO:0030029;actin filament-based process;0.015182983265931!GO:0043488;regulation of mRNA stability;0.0153678860716999!GO:0043487;regulation of RNA stability;0.0153678860716999!GO:0008637;apoptotic mitochondrial changes;0.0153881862719326!GO:0051338;regulation of transferase activity;0.0156420146839498!GO:0045454;cell redox homeostasis;0.0156459015973037!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0166674924333223!GO:0045047;protein targeting to ER;0.0166674924333223!GO:0042613;MHC class II protein complex;0.0167797253708233!GO:0006779;porphyrin biosynthetic process;0.0167797253708233!GO:0033014;tetrapyrrole biosynthetic process;0.0167797253708233!GO:0004185;serine carboxypeptidase activity;0.016788823217949!GO:0031901;early endosome membrane;0.0169857509208044!GO:0006897;endocytosis;0.0170312471064709!GO:0010324;membrane invagination;0.0170312471064709!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0174815847677104!GO:0019883;antigen processing and presentation of endogenous antigen;0.0179485687640209!GO:0006213;pyrimidine nucleoside metabolic process;0.0181494910918177!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0181740226447832!GO:0015923;mannosidase activity;0.0184695650544492!GO:0002440;production of molecular mediator of immune response;0.0185512287404635!GO:0006595;polyamine metabolic process;0.0186986640453403!GO:0000118;histone deacetylase complex;0.0187650747244896!GO:0006338;chromatin remodeling;0.0188028474362177!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.018813018465567!GO:0002819;regulation of adaptive immune response;0.018813018465567!GO:0043300;regulation of leukocyte degranulation;0.0188985185164775!GO:0048002;antigen processing and presentation of peptide antigen;0.0192668035461989!GO:0006914;autophagy;0.0193640311833261!GO:0050853;B cell receptor signaling pathway;0.0197056132351625!GO:0050863;regulation of T cell activation;0.0197056132351625!GO:0009165;nucleotide biosynthetic process;0.0199849730743162!GO:0030522;intracellular receptor-mediated signaling pathway;0.0201002476605646!GO:0043549;regulation of kinase activity;0.0201002476605646!GO:0051087;chaperone binding;0.0204785110511348!GO:0003711;transcription elongation regulator activity;0.0204785110511348!GO:0043506;regulation of JNK activity;0.0210978467973027!GO:0008312;7S RNA binding;0.0214694918519632!GO:0008656;caspase activator activity;0.0214957517705479!GO:0051345;positive regulation of hydrolase activity;0.0215872265177193!GO:0000278;mitotic cell cycle;0.0216739221031977!GO:0046578;regulation of Ras protein signal transduction;0.0226184889283091!GO:0009897;external side of plasma membrane;0.0227003017102184!GO:0030133;transport vesicle;0.0231705882863595!GO:0030176;integral to endoplasmic reticulum membrane;0.0233316917863008!GO:0045653;negative regulation of megakaryocyte differentiation;0.0234139959842592!GO:0003899;DNA-directed RNA polymerase activity;0.0235048355002216!GO:0030833;regulation of actin filament polymerization;0.0235168344172169!GO:0006376;mRNA splice site selection;0.0235194508409233!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0235194508409233!GO:0043028;caspase regulator activity;0.023819825301518!GO:0005669;transcription factor TFIID complex;0.0242936016890834!GO:0002274;myeloid leukocyte activation;0.0250222590317375!GO:0030674;protein binding, bridging;0.0250662285917381!GO:0043681;protein import into mitochondrion;0.0251127868119304!GO:0030119;AP-type membrane coat adaptor complex;0.0252930150903283!GO:0048487;beta-tubulin binding;0.0253692632449067!GO:0030027;lamellipodium;0.0256490837950335!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0256490837950335!GO:0030131;clathrin adaptor complex;0.0259502271511911!GO:0005684;U2-dependent spliceosome;0.0260118504462396!GO:0033367;protein localization in mast cell secretory granule;0.0260118504462396!GO:0033365;protein localization in organelle;0.0260118504462396!GO:0033371;T cell secretory granule organization and biogenesis;0.0260118504462396!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0260118504462396!GO:0033375;protease localization in T cell secretory granule;0.0260118504462396!GO:0042629;mast cell granule;0.0260118504462396!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0260118504462396!GO:0033364;mast cell secretory granule organization and biogenesis;0.0260118504462396!GO:0033380;granzyme B localization in T cell secretory granule;0.0260118504462396!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0260118504462396!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0260118504462396!GO:0033368;protease localization in mast cell secretory granule;0.0260118504462396!GO:0033366;protein localization in secretory granule;0.0260118504462396!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0260118504462396!GO:0033374;protein localization in T cell secretory granule;0.0260118504462396!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0261323240515587!GO:0006405;RNA export from nucleus;0.0263164109616209!GO:0006672;ceramide metabolic process;0.0264090394034691!GO:0046979;TAP2 binding;0.026631742521721!GO:0046977;TAP binding;0.026631742521721!GO:0046978;TAP1 binding;0.026631742521721!GO:0002449;lymphocyte mediated immunity;0.0266518431074138!GO:0005048;signal sequence binding;0.0272896866267556!GO:0006414;translational elongation;0.0275227339897891!GO:0008629;induction of apoptosis by intracellular signals;0.0276156274977743!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0276926928921762!GO:0051789;response to protein stimulus;0.0276926928921762!GO:0006986;response to unfolded protein;0.0276926928921762!GO:0045309;protein phosphorylated amino acid binding;0.0276926928921762!GO:0043085;positive regulation of catalytic activity;0.0280643505091857!GO:0006383;transcription from RNA polymerase III promoter;0.0284629742601115!GO:0035258;steroid hormone receptor binding;0.0289457932808223!GO:0006740;NADPH regeneration;0.0290401100228706!GO:0006098;pentose-phosphate shunt;0.0290401100228706!GO:0045893;positive regulation of transcription, DNA-dependent;0.0290401100228706!GO:0033157;regulation of intracellular protein transport;0.0293754692541302!GO:0042306;regulation of protein import into nucleus;0.0293754692541302!GO:0019955;cytokine binding;0.0297826113421188!GO:0046966;thyroid hormone receptor binding;0.0298946759546444!GO:0003746;translation elongation factor activity;0.0299671464318833!GO:0016281;eukaryotic translation initiation factor 4F complex;0.03036794490218!GO:0019864;IgG binding;0.0304868199626652!GO:0015631;tubulin binding;0.0305839678180479!GO:0007006;mitochondrial membrane organization and biogenesis;0.0308214518906003!GO:0002682;regulation of immune system process;0.030995077430698!GO:0045859;regulation of protein kinase activity;0.0310594657751809!GO:0002250;adaptive immune response;0.0311461152541353!GO:0002460;adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.0311461152541353!GO:0002448;mast cell mediated immunity;0.031276276384232!GO:0043303;mast cell degranulation;0.031276276384232!GO:0016853;isomerase activity;0.032032536392268!GO:0046519;sphingoid metabolic process;0.0325146894442374!GO:0019865;immunoglobulin binding;0.0325507914917394!GO:0016605;PML body;0.0333381944828769!GO:0002253;activation of immune response;0.0340387760030361!GO:0051235;maintenance of localization;0.0340387760030361!GO:0030137;COPI-coated vesicle;0.0343265215080818!GO:0051091;positive regulation of transcription factor activity;0.0344882200241431!GO:0030127;COPII vesicle coat;0.0349443061705732!GO:0012507;ER to Golgi transport vesicle membrane;0.0349443061705732!GO:0016311;dephosphorylation;0.0349771370067628!GO:0046854;phosphoinositide phosphorylation;0.0353341865043127!GO:0022406;membrane docking;0.0353341865043127!GO:0048278;vesicle docking;0.0353341865043127!GO:0030663;COPI coated vesicle membrane;0.0356102203742583!GO:0030126;COPI vesicle coat;0.0356102203742583!GO:0045637;regulation of myeloid cell differentiation;0.0357333370234866!GO:0046983;protein dimerization activity;0.035835004787958!GO:0019863;IgE binding;0.0358621496416211!GO:0015630;microtubule cytoskeleton;0.0359174830601902!GO:0051049;regulation of transport;0.0362717498266686!GO:0007040;lysosome organization and biogenesis;0.0364462204344632!GO:0001784;phosphotyrosine binding;0.0365856005466089!GO:0051881;regulation of mitochondrial membrane potential;0.0366475010600842!GO:0019079;viral genome replication;0.0367059245732152!GO:0042288;MHC class I protein binding;0.0367059245732152!GO:0030132;clathrin coat of coated pit;0.0371380424387809!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0372725385678555!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0372725385678555!GO:0002444;myeloid leukocyte mediated immunity;0.0376918156852959!GO:0031294;lymphocyte costimulation;0.0376918156852959!GO:0031295;T cell costimulation;0.0376918156852959!GO:0000303;response to superoxide;0.0377396791219913!GO:0015036;disulfide oxidoreductase activity;0.0378695985753856!GO:0008139;nuclear localization sequence binding;0.0380958381378718!GO:0006904;vesicle docking during exocytosis;0.0383056702647758!GO:0006007;glucose catabolic process;0.0386742491362655!GO:0003702;RNA polymerase II transcription factor activity;0.0387122002678236!GO:0031301;integral to organelle membrane;0.0390216091880754!GO:0000059;protein import into nucleus, docking;0.0392430276189824!GO:0042608;T cell receptor binding;0.0394182908153945!GO:0030098;lymphocyte differentiation;0.0394891239009847!GO:0017166;vinculin binding;0.0394989131397729!GO:0002218;activation of innate immune response;0.0396213841748991!GO:0002758;innate immune response-activating signal transduction;0.0396213841748991!GO:0043304;regulation of mast cell degranulation;0.039987377075811!GO:0016788;hydrolase activity, acting on ester bonds;0.040005190851703!GO:0050854;regulation of antigen receptor-mediated signaling pathway;0.040121269525963!GO:0043621;protein self-association;0.0402906663631836!GO:0032760;positive regulation of tumor necrosis factor production;0.0404176055128641!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0405143542466818!GO:0016504;protease activator activity;0.0414430792465886!GO:0030217;T cell differentiation;0.0417045366701861!GO:0009116;nucleoside metabolic process;0.0419531209527769!GO:0045941;positive regulation of transcription;0.0424438484826645!GO:0002467;germinal center formation;0.0424832640714779!GO:0043235;receptor complex;0.0428848484043735!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0434371720074178!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0434371720074178!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0435125084471092!GO:0030125;clathrin vesicle coat;0.0438569816466414!GO:0030665;clathrin coated vesicle membrane;0.0438569816466414!GO:0006497;protein amino acid lipidation;0.0455107868705917!GO:0006261;DNA-dependent DNA replication;0.0461233729037668!GO:0043414;biopolymer methylation;0.0462257385633213!GO:0005784;translocon complex;0.0464671937359792!GO:0008383;manganese superoxide dismutase activity;0.0465046655541668!GO:0001315;age-dependent response to reactive oxygen species;0.0465046655541668!GO:0004177;aminopeptidase activity;0.0465046655541668!GO:0002483;antigen processing and presentation of endogenous peptide antigen;0.0465046655541668!GO:0019885;antigen processing and presentation of endogenous peptide antigen via MHC class I;0.0465046655541668!GO:0004721;phosphoprotein phosphatase activity;0.0465046655541668!GO:0032763;regulation of mast cell cytokine production;0.0465046655541668!GO:0032762;mast cell cytokine production;0.0465046655541668!GO:0031461;cullin-RING ubiquitin ligase complex;0.0465046655541668!GO:0005762;mitochondrial large ribosomal subunit;0.0465046655541668!GO:0000315;organellar large ribosomal subunit;0.0465046655541668!GO:0004672;protein kinase activity;0.0467749367564923!GO:0044262;cellular carbohydrate metabolic process;0.0474327766453325!GO:0006506;GPI anchor biosynthetic process;0.0482652188530431!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0482652188530431!GO:0005869;dynactin complex;0.0483592925083354!GO:0004218;cathepsin S activity;0.0488373983302355!GO:0051056;regulation of small GTPase mediated signal transduction;0.0495110001547382!GO:0022411;cellular component disassembly;0.0497975683769422 | |||
|sample_id=12176 | |sample_id=12176 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 100: | ||
|sample_tissue=blood | |sample_tissue=blood | ||
|top_motifs=GATA6:3.01579400363;ETS1,2:2.43030851762;FOXO1,3,4:2.3183075348;DMAP1_NCOR{1,2}_SMARC:2.31037050691;ELF1,2,4:2.22645511389;SPI1:2.19899136762;SPIB:2.19663025218;T:2.14189196974;FOXD3:2.1385831428;RUNX1..3:1.91380888239;FOX{D1,D2}:1.81604272595;NKX2-2,8:1.59081332413;FOX{F1,F2,J1}:1.53753921115;STAT5{A,B}:1.51532153876;CDX1,2,4:1.47139778774;FOXP3:1.44564720115;IKZF2:1.44428453183;FOXA2:1.36834265813;IRF7:1.36523705343;NANOG{mouse}:1.35300812099;IRF1,2:1.34138415539;TOPORS:1.3097026067;POU5F1:1.25997017138;STAT1,3:1.22951955022;TLX2:1.2171863635;SPZ1:1.17207817876;BPTF:1.11049549036;TGIF1:0.974032674346;FOXP1:0.942483655044;CEBPA,B_DDIT3:0.936684308839;FOX{I1,J2}:0.929775868789;ALX1:0.91071332144;TFAP4:0.879700836537;PITX1..3:0.812348452172;FOXN1:0.799849722649;HOXA9_MEIS1:0.779271433855;POU2F1..3:0.773454644288;EP300:0.772516038376;PDX1:0.750785436077;OCT4_SOX2{dimer}:0.67965359779;SREBF1,2:0.659750915607;NKX3-1:0.656557661281;HBP1_HMGB_SSRP1_UBTF:0.604096439056;SMAD1..7,9:0.559473149029;NFE2L2:0.558797325298;PAX3,7:0.549013613696;NFATC1..3:0.458025286903;ZNF148:0.450898814024;EVI1:0.445373293194;MYFfamily:0.435501787379;ZEB1:0.416079427177;RXRA_VDR{dimer}:0.397709811782;HMX1:0.393672611932;STAT2,4,6:0.350850721575;NKX2-1,4:0.347574517425;CRX:0.347556668151;FOXQ1:0.347457369928;PAX2:0.331519012994;HMGA1,2:0.298111481565;DBP:0.249672767222;MYOD1:0.246388196584;ZNF423:0.221388434293;RBPJ:0.220730730851;RREB1:0.201152905966;RFX2..5_RFXANK_RFXAP:0.201048518635;SNAI1..3:0.194808768744;NKX6-1,2:0.15637632306;NFIL3:0.138703177061;MZF1:0.134925396503;ZBTB16:0.116586531842;TFCP2:0.114127289225;RORA:0.104660869584;BREu{core}:0.0981422852319;CUX2:0.077537327292;LMO2:0.0712847264938;NFKB1_REL_RELA:0.0278379354809;AIRE:0.00838623091158;ATF5_CREB3:-0.018079867727;NR1H4:-0.032207663101;TAL1_TCF{3,4,12}:-0.0969414948274;POU1F1:-0.111047361611;GATA4:-0.116830549402;HLF:-0.119445236898;MYB:-0.132408208316;ELK1,4_GABP{A,B1}:-0.139624284367;MAZ:-0.154556125929;NKX3-2:-0.172301187585;XCPE1{core}:-0.175818970089;ZNF238:-0.184102835968;VSX1,2:-0.208405598875;CREB1:-0.214920110062;GLI1..3:-0.24273903861;NFIX:-0.286412718068;ADNP_IRX_SIX_ZHX:-0.300811954882;PPARG:-0.312691100996;ZNF143:-0.344829741287;NR6A1:-0.360499057457;NFE2L1:-0.395979728959;NFE2:-0.40797953547;ATF2:-0.408787470346;PRRX1,2:-0.437714131621;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.438976649719;SOX5:-0.441321043004;POU6F1:-0.450039487732;HNF4A_NR2F1,2:-0.463670929339;NHLH1,2:-0.473673927573;YY1:-0.480834033528;SRF:-0.484481897323;ZFP161:-0.492968761256;SP1:-0.50661276305;NRF1:-0.506617993828;PRDM1:-0.508724302098;LEF1_TCF7_TCF7L1,2:-0.523939212126;HES1:-0.534735805083;NR3C1:-0.555113404488;AR:-0.56530241787;BACH2:-0.579250504767;HNF1A:-0.601350136133;PAX6:-0.621185139533;REST:-0.626573511928;FOSL2:-0.627308904638;KLF4:-0.641606936092;ALX4:-0.651060920723;PATZ1:-0.690905243206;MAFB:-0.717147621256;FOS_FOS{B,L1}_JUN{B,D}:-0.71751225376;EGR1..3:-0.719138001281;TBX4,5:-0.736670877965;MTF1:-0.7394082686;NFY{A,B,C}:-0.783367425972;RFX1:-0.802491063908;ZNF384:-0.813183164637;LHX3,4:-0.817269152587;GCM1,2:-0.830535564119;FOXL1:-0.841278951483;NKX2-3_NKX2-5:-0.85390343493;ATF4:-0.854829072752;GTF2I:-0.858071941889;MTE{core}:-0.859925410343;NANOG:-0.888141427678;NR5A1,2:-0.889451650795;ARID5B:-0.897761734418;HOX{A6,A7,B6,B7}:-0.921301059441;MEF2{A,B,C,D}:-0.92331461509;PBX1:-0.927341834782;HIF1A:-0.928442544676;TFAP2B:-0.930035525943;MED-1{core}:-0.942698513825;E2F1..5:-0.945983390551;JUN:-0.962833544386;SOX2:-1.01817473187;HIC1:-1.0269433731;AHR_ARNT_ARNT2:-1.04833148032;ESR1:-1.08839970206;PAX5:-1.1363562353;MYBL2:-1.14968421436;SOX{8,9,10}:-1.15372626732;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.18402947474;TFAP2{A,C}:-1.2023109144;PAX4:-1.21756440338;GZF1:-1.28541576838;TLX1..3_NFIC{dimer}:-1.29436817751;GFI1:-1.30166663653;EN1,2:-1.3104033434;EBF1:-1.31301467142;RXR{A,B,G}:-1.36256178749;HAND1,2:-1.36720041014;ZBTB6:-1.39682726631;GTF2A1,2:-1.40128417595;UFEwm:-1.40271645127;TBP:-1.4283732085;GFI1B:-1.47627571875;ONECUT1,2:-1.48734557428;FOXM1:-1.50832079286;POU3F1..4:-1.51597621855;CDC5L:-1.56546335106;HSF1,2:-1.57433288868;TP53:-1.62271870626;XBP1:-1.65967688306;ATF6:-1.66156663685;TEAD1:-1.68920619387;bHLH_family:-1.81316813811;TEF:-1.86326707664;TFDP1:-1.89560227981;ZIC1..3:-1.8980620076;PAX1,9:-1.94898776303;PAX8:-2.00735223685;HOX{A5,B5}:-2.05871221459;HOX{A4,D4}:-2.08102656786;SOX17:-2.13121940999;ESRRA:-2.47828909443;IKZF1:-2.92520229591 | |top_motifs=GATA6:3.01579400363;ETS1,2:2.43030851762;FOXO1,3,4:2.3183075348;DMAP1_NCOR{1,2}_SMARC:2.31037050691;ELF1,2,4:2.22645511389;SPI1:2.19899136762;SPIB:2.19663025218;T:2.14189196974;FOXD3:2.1385831428;RUNX1..3:1.91380888239;FOX{D1,D2}:1.81604272595;NKX2-2,8:1.59081332413;FOX{F1,F2,J1}:1.53753921115;STAT5{A,B}:1.51532153876;CDX1,2,4:1.47139778774;FOXP3:1.44564720115;IKZF2:1.44428453183;FOXA2:1.36834265813;IRF7:1.36523705343;NANOG{mouse}:1.35300812099;IRF1,2:1.34138415539;TOPORS:1.3097026067;POU5F1:1.25997017138;STAT1,3:1.22951955022;TLX2:1.2171863635;SPZ1:1.17207817876;BPTF:1.11049549036;TGIF1:0.974032674346;FOXP1:0.942483655044;CEBPA,B_DDIT3:0.936684308839;FOX{I1,J2}:0.929775868789;ALX1:0.91071332144;TFAP4:0.879700836537;PITX1..3:0.812348452172;FOXN1:0.799849722649;HOXA9_MEIS1:0.779271433855;POU2F1..3:0.773454644288;EP300:0.772516038376;PDX1:0.750785436077;OCT4_SOX2{dimer}:0.67965359779;SREBF1,2:0.659750915607;NKX3-1:0.656557661281;HBP1_HMGB_SSRP1_UBTF:0.604096439056;SMAD1..7,9:0.559473149029;NFE2L2:0.558797325298;PAX3,7:0.549013613696;NFATC1..3:0.458025286903;ZNF148:0.450898814024;EVI1:0.445373293194;MYFfamily:0.435501787379;ZEB1:0.416079427177;RXRA_VDR{dimer}:0.397709811782;HMX1:0.393672611932;STAT2,4,6:0.350850721575;NKX2-1,4:0.347574517425;CRX:0.347556668151;FOXQ1:0.347457369928;PAX2:0.331519012994;HMGA1,2:0.298111481565;DBP:0.249672767222;MYOD1:0.246388196584;ZNF423:0.221388434293;RBPJ:0.220730730851;RREB1:0.201152905966;RFX2..5_RFXANK_RFXAP:0.201048518635;SNAI1..3:0.194808768744;NKX6-1,2:0.15637632306;NFIL3:0.138703177061;MZF1:0.134925396503;ZBTB16:0.116586531842;TFCP2:0.114127289225;RORA:0.104660869584;BREu{core}:0.0981422852319;CUX2:0.077537327292;LMO2:0.0712847264938;NFKB1_REL_RELA:0.0278379354809;AIRE:0.00838623091158;ATF5_CREB3:-0.018079867727;NR1H4:-0.032207663101;TAL1_TCF{3,4,12}:-0.0969414948274;POU1F1:-0.111047361611;GATA4:-0.116830549402;HLF:-0.119445236898;MYB:-0.132408208316;ELK1,4_GABP{A,B1}:-0.139624284367;MAZ:-0.154556125929;NKX3-2:-0.172301187585;XCPE1{core}:-0.175818970089;ZNF238:-0.184102835968;VSX1,2:-0.208405598875;CREB1:-0.214920110062;GLI1..3:-0.24273903861;NFIX:-0.286412718068;ADNP_IRX_SIX_ZHX:-0.300811954882;PPARG:-0.312691100996;ZNF143:-0.344829741287;NR6A1:-0.360499057457;NFE2L1:-0.395979728959;NFE2:-0.40797953547;ATF2:-0.408787470346;PRRX1,2:-0.437714131621;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.438976649719;SOX5:-0.441321043004;POU6F1:-0.450039487732;HNF4A_NR2F1,2:-0.463670929339;NHLH1,2:-0.473673927573;YY1:-0.480834033528;SRF:-0.484481897323;ZFP161:-0.492968761256;SP1:-0.50661276305;NRF1:-0.506617993828;PRDM1:-0.508724302098;LEF1_TCF7_TCF7L1,2:-0.523939212126;HES1:-0.534735805083;NR3C1:-0.555113404488;AR:-0.56530241787;BACH2:-0.579250504767;HNF1A:-0.601350136133;PAX6:-0.621185139533;REST:-0.626573511928;FOSL2:-0.627308904638;KLF4:-0.641606936092;ALX4:-0.651060920723;PATZ1:-0.690905243206;MAFB:-0.717147621256;FOS_FOS{B,L1}_JUN{B,D}:-0.71751225376;EGR1..3:-0.719138001281;TBX4,5:-0.736670877965;MTF1:-0.7394082686;NFY{A,B,C}:-0.783367425972;RFX1:-0.802491063908;ZNF384:-0.813183164637;LHX3,4:-0.817269152587;GCM1,2:-0.830535564119;FOXL1:-0.841278951483;NKX2-3_NKX2-5:-0.85390343493;ATF4:-0.854829072752;GTF2I:-0.858071941889;MTE{core}:-0.859925410343;NANOG:-0.888141427678;NR5A1,2:-0.889451650795;ARID5B:-0.897761734418;HOX{A6,A7,B6,B7}:-0.921301059441;MEF2{A,B,C,D}:-0.92331461509;PBX1:-0.927341834782;HIF1A:-0.928442544676;TFAP2B:-0.930035525943;MED-1{core}:-0.942698513825;E2F1..5:-0.945983390551;JUN:-0.962833544386;SOX2:-1.01817473187;HIC1:-1.0269433731;AHR_ARNT_ARNT2:-1.04833148032;ESR1:-1.08839970206;PAX5:-1.1363562353;MYBL2:-1.14968421436;SOX{8,9,10}:-1.15372626732;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.18402947474;TFAP2{A,C}:-1.2023109144;PAX4:-1.21756440338;GZF1:-1.28541576838;TLX1..3_NFIC{dimer}:-1.29436817751;GFI1:-1.30166663653;EN1,2:-1.3104033434;EBF1:-1.31301467142;RXR{A,B,G}:-1.36256178749;HAND1,2:-1.36720041014;ZBTB6:-1.39682726631;GTF2A1,2:-1.40128417595;UFEwm:-1.40271645127;TBP:-1.4283732085;GFI1B:-1.47627571875;ONECUT1,2:-1.48734557428;FOXM1:-1.50832079286;POU3F1..4:-1.51597621855;CDC5L:-1.56546335106;HSF1,2:-1.57433288868;TP53:-1.62271870626;XBP1:-1.65967688306;ATF6:-1.66156663685;TEAD1:-1.68920619387;bHLH_family:-1.81316813811;TEF:-1.86326707664;TFDP1:-1.89560227981;ZIC1..3:-1.8980620076;PAX1,9:-1.94898776303;PAX8:-2.00735223685;HOX{A5,B5}:-2.05871221459;HOX{A4,D4}:-2.08102656786;SOX17:-2.13121940999;ESRRA:-2.47828909443;IKZF1:-2.92520229591 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12176-128I7;search_select_hide=table117:FF:12176-128I7 | |||
}} | }} | ||
Latest revision as of 18:32, 4 June 2020
| Name: | Whole blood (ribopure), donor090325, donation1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11075 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| HumanCAGEScan Download raw sequence, BAM & CTSS | ||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11075
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11075
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.162 |
| 10 | 10 | 0.0355 |
| 100 | 100 | 0.72 |
| 101 | 101 | 0.203 |
| 102 | 102 | 0.84 |
| 103 | 103 | 0.263 |
| 104 | 104 | 0.64 |
| 105 | 105 | 0.21 |
| 106 | 106 | 0.0809 |
| 107 | 107 | 0.737 |
| 108 | 108 | 0.81 |
| 109 | 109 | 0.138 |
| 11 | 11 | 0.105 |
| 110 | 110 | 0.386 |
| 111 | 111 | 0.26 |
| 112 | 112 | 0.185 |
| 113 | 113 | 0.142 |
| 114 | 114 | 0.0952 |
| 115 | 115 | 0.276 |
| 116 | 116 | 0.806 |
| 117 | 117 | 0.016 |
| 118 | 118 | 0.472 |
| 119 | 119 | 0.392 |
| 12 | 12 | 0.63 |
| 120 | 120 | 0.576 |
| 121 | 121 | 0.817 |
| 122 | 122 | 0.421 |
| 123 | 123 | 0.00626 |
| 124 | 124 | 0.115 |
| 125 | 125 | 0.172 |
| 126 | 126 | 0.329 |
| 127 | 127 | 0.409 |
| 128 | 128 | 0.0724 |
| 129 | 129 | 0.561 |
| 13 | 13 | 0.802 |
| 130 | 130 | 0.544 |
| 131 | 131 | 0.783 |
| 132 | 132 | 0.589 |
| 133 | 133 | 0.686 |
| 134 | 134 | 0.93 |
| 135 | 135 | 0.436 |
| 136 | 136 | 0.919 |
| 137 | 137 | 0.0105 |
| 138 | 138 | 0.0883 |
| 139 | 139 | 0.0326 |
| 14 | 14 | 0.15 |
| 140 | 140 | 0.939 |
| 141 | 141 | 0.41 |
| 142 | 142 | 0.652 |
| 143 | 143 | 0.00311 |
| 144 | 144 | 0.65 |
| 145 | 145 | 0.195 |
| 146 | 146 | 0.705 |
| 147 | 147 | 0.0672 |
| 148 | 148 | 0.164 |
| 149 | 149 | 0.436 |
| 15 | 15 | 0.0807 |
| 150 | 150 | 0.97 |
| 151 | 151 | 0.21 |
| 152 | 152 | 0.621 |
| 153 | 153 | 0.595 |
| 154 | 154 | 0.78 |
| 155 | 155 | 0.178 |
| 156 | 156 | 0.695 |
| 157 | 157 | 0.14 |
| 158 | 158 | 0.271 |
| 159 | 159 | 0.152 |
| 16 | 16 | 0.545 |
| 160 | 160 | 0.617 |
| 161 | 161 | 0.242 |
| 162 | 162 | 0.69 |
| 163 | 163 | 0.378 |
| 164 | 164 | 0.235 |
| 165 | 165 | 0.0704 |
| 166 | 166 | 0.845 |
| 167 | 167 | 0.809 |
| 168 | 168 | 0.104 |
| 169 | 169 | 0.0271 |
| 17 | 17 | 0.512 |
| 18 | 18 | 0.615 |
| 19 | 19 | 0.468 |
| 2 | 2 | 0.304 |
| 20 | 20 | 0.698 |
| 21 | 21 | 0.34 |
| 22 | 22 | 0.348 |
| 23 | 23 | 0.22 |
| 24 | 24 | 0.103 |
| 25 | 25 | 0.224 |
| 26 | 26 | 0.238 |
| 27 | 27 | 0.0801 |
| 28 | 28 | 0.453 |
| 29 | 29 | 0.374 |
| 3 | 3 | 0.0573 |
| 30 | 30 | 0.667 |
| 31 | 31 | 0.614 |
| 32 | 32 | 0.411 |
| 33 | 33 | 0.726 |
| 34 | 34 | 0.297 |
| 35 | 35 | 0.168 |
| 36 | 36 | 0.251 |
| 37 | 37 | 0.178 |
| 38 | 38 | 0.405 |
| 39 | 39 | 0.986 |
| 4 | 4 | 0.765 |
| 40 | 40 | 0.444 |
| 41 | 41 | 0.193 |
| 42 | 42 | 0.17 |
| 43 | 43 | 0.193 |
| 44 | 44 | 0.362 |
| 45 | 45 | 0.636 |
| 46 | 46 | 0.139 |
| 47 | 47 | 0.16 |
| 48 | 48 | 0.257 |
| 49 | 49 | 0.113 |
| 5 | 5 | 0.23 |
| 50 | 50 | 0.994 |
| 51 | 51 | 0.489 |
| 52 | 52 | 0.637 |
| 53 | 53 | 0.0502 |
| 54 | 54 | 0.357 |
| 55 | 55 | 0.0568 |
| 56 | 56 | 0.261 |
| 57 | 57 | 0.504 |
| 58 | 58 | 0.0579 |
| 59 | 59 | 0.121 |
| 6 | 6 | 0.769 |
| 60 | 60 | 0.12 |
| 61 | 61 | 0.223 |
| 62 | 62 | 0.0225 |
| 63 | 63 | 0.528 |
| 64 | 64 | 0.38 |
| 65 | 65 | 0.253 |
| 66 | 66 | 0.533 |
| 67 | 67 | 0.395 |
| 68 | 68 | 0.448 |
| 69 | 69 | 0.512 |
| 7 | 7 | 0.196 |
| 70 | 70 | 0.0612 |
| 71 | 71 | 0.093 |
| 72 | 72 | 0.195 |
| 73 | 73 | 0.413 |
| 74 | 74 | 0.609 |
| 75 | 75 | 0.0774 |
| 76 | 76 | 0.252 |
| 77 | 77 | 0.705 |
| 78 | 78 | 0.302 |
| 79 | 79 | 0.934 |
| 8 | 8 | 0.454 |
| 80 | 80 | 0.0225 |
| 81 | 81 | 0.263 |
| 82 | 82 | 0.0186 |
| 83 | 83 | 0.846 |
| 84 | 84 | 0.215 |
| 85 | 85 | 0.341 |
| 86 | 86 | 0.125 |
| 87 | 87 | 0.673 |
| 88 | 88 | 0.56 |
| 89 | 89 | 0.619 |
| 9 | 9 | 0.3 |
| 90 | 90 | 0.0154 |
| 91 | 91 | 0.334 |
| 92 | 92 | 0.0962 |
| 93 | 93 | 0.366 |
| 94 | 94 | 0.114 |
| 95 | 95 | 0.36 |
| 96 | 96 | 0.133 |
| 97 | 97 | 0.656 |
| 98 | 98 | 0.083 |
| 99 | 99 | 0.369 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11075
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000002 in vivo cell sample
FF:0000281 human whole blood sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000178 (blood)
0000479 (tissue)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000179 (haemolymphatic fluid)
0000463 (organism substance)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0010317 (germ layer / neural crest derived structure)
0002390 (hematopoietic system)
0004535 (cardiovascular system)
0002193 (hemolymphoid system)
0001009 (circulatory system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0010053 (human blood - adult sample)
0000004 (tissue sample)
0000281 (human whole blood sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA
