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{{f5samples
{{f5samples
|id=FF:12243-129H2
|DRA_sample_Accession=CAGE@SAMD00005610
|name=Basophils, donor3
|accession_numbers=CAGE;DRX008118;DRR008990;DRZ000415;DRZ001800;DRZ011765;DRZ013150
|sample_id=12243
|ancestors_in_anatomy_facet=
|rna_tube_id=129H2
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000081,CL:0000219,CL:0000738,CL:0000255,CL:0000094,CL:0000767
|rna_box=129
|rna_position=H2
|sample_cell_lot=lot:BASO743
|sample_cell_catalog=N/A
|sample_company=3HBiomedical
|rna_lot_number=
|rna_catalog_number=3H100-93-5
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=blood
|sample_donor(cell lot)=
|sample_sex=
|sample_age=
|sample_ethnicity=
|rna_rin=9.3
|rna_od260/230=1.75
|rna_od260/280=2.02
|sample_cell_type=basophil
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0
|rna_weight_ug=3.52176
|rna_concentration=0.29348
|sample_note=Jan 20 librarian
|profile_hcage=CNhs12575,LSID917,release012,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000048,CL:0000049,CL:0000063,CL:0000081,CL:0000094,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000566,CL:0000723,CL:0000738,CL:0000763,CL:0000766,CL:0000767,CL:0000837,CL:0000988,CL:0002032,CL:0002320,CL:0002371
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000479,UBERON:0001062,UBERON:0002384
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000013,FF:0000212
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr2:68592406..68592424,+!p1@PLEK!2.56!364.59!PLEK;;chr11:47400078..47400106,-!p1@SPI1!2.56!360.88!SPI1;;chr12:54778471..54778528,-!p1@ZNF385A!2.32!208.54!ZNF385A;;chr16:85932760..85932775,+!p1@IRF8!2.26!179.28!IRF8;;chr19:45971246..45971265,+!p1@FOSB!2.17!2531.09!FOSB;;chr11:47400062..47400077,-!p2@SPI1!2.11!129.12!SPI1;;chr1:25256756..25256774,-!p1@RUNX3!2.04!198.63!RUNX3;;chr14:75745523..75745537,+!p1@FOS!1.97!10252.08!FOS;;chr2:157189180..157189290,-!p1@NR4A2!1.85!345.86!NR4A2;;chr20:39317868..39317884,-!p1@MAFB!1.84!757.67!MAFB;;chr9:110252035..110252057,-!p1@KLF4!1.80!939.11!KLF4;;chr11:47399947..47399961,-!p3@SPI1!1.80!62.70!SPI1;;chr7:50344289..50344323,+!p1@IKZF1!1.74!54.50!IKZF1;;chr6:391743..391759,+!p1@IRF4!1.68!46.44!IRF4;;chr3:39195075..39195088,-!p1@CSRNP1!1.66!266.75!CSRNP1;;chr12:54778351..54778378,-!p6@ZNF385A!1.66!44.90!ZNF385A;;chr10:8096631..8096660,+!p1@GATA3!1.63!50.32!GATA3;;chr19:54041669..54041697,+!p2@ZNF331!1.62!40.72!ZNF331;;chr9:110250697..110250738,-!p2@KLF4!1.60!45.83!KLF4;;chr2:145277640..145277771,-!p1@ZEB2!1.58!473.89!ZEB2;;chr19:54058073..54058088,+!p1@ZNF331!1.57!36.23!ZNF331;;chr7:50343634..50343717,+!p2@IKZF1!1.57!35.92!IKZF1;;chr2:70142232..70142251,+!p1@MXD1!1.56!189.65!MXD1;;chr21:36260295..36260310,-!p3@RUNX1!1.56!55.89!RUNX1;;chr3:39195139..39195150,-!p3@CSRNP1!1.56!44.12!CSRNP1;;chr1:25256439..25256476,-!p3@RUNX3!1.55!34.68!RUNX3;;chrX:106960180..106960197,-!p2@TSC22D3!1.54!125.40!TSC22D3;;chr14:35872962..35873025,-!p3@NFKBIA!1.53!80.04!NFKBIA;;chr19:45252008..45252024,+!p2@BCL3!1.52!101.87!BCL3;;chr2:145271342..145271377,-!p5@ZEB2!1.52!32.20!ZEB2;;chr11:47400032..47400043,-!p5@SPI1!1.52!32.05!SPI1;;chr11:47399996..47400014,-!p4@SPI1!1.52!31.89!SPI1;;chr12:72056800..72056834,+!p1@THAP2!1.51!42.26!THAP2;;chr10:3827371..3827386,-!p2@KLF6!1.50!249.25!KLF6;;chr9:102584262..102584276,+!p1@NR4A3!1.46!60.53!NR4A3;;chr19:16435625..16435682,+!p1@KLF2!1.44!813.71!KLF2;;chr3:39195037..39195069,-!p2@CSRNP1!1.44!159.62!CSRNP1;;chr11:47400045..47400060,-!p6@SPI1!1.44!26.32!SPI1;;chr2:192015701..192015743,-!p1@STAT4!1.43!34.99!STAT4;;chr14:35873947..35873965,-!p1@NFKBIA!1.41!1502.80!NFKBIA;;chr17:45810594..45810608,+!p1@TBX21!1.39!23.69!TBX21;;chr12:52445218..52445237,+!p1@NR4A1!1.37!274.33!NR4A1;;chr10:35484053..35484076,+!p1@CREM!1.36!53.10!CREM;;chr21:34442439..34442455,+!p1@OLIG1!1.35!21.52!OLIG1;;chr12:72056773..72056796,+!p3@THAP2!1.34!26.94!THAP2;;chrX:106960285..106960299,-!p1@TSC22D3!1.32!511.82!TSC22D3;;chr19:12902289..12902307,+!p1@JUNB!1.31!4265.34!JUNB;;chr16:31885093..31885165,+!p1@ZNF267!1.30!278.20!ZNF267;;chrX:106960221..106960236,-!p3@TSC22D3!1.30!52.02!TSC22D3;;chr18:3448455..3448480,+!p5@TGIF1!1.30!34.68!TGIF1;;chr9:102584241..102584261,+!p4@NR4A3!1.30!28.95!NR4A3;;chr4:83822199..83822239,+!p2@THAP9!1.30!22.45!THAP9;;chr12:57914286..57914304,-!p1@DDIT3!1.29!644.81!DDIT3;;chr19:36391434..36391450,-!p1@NFKBID!1.29!36.38!NFKBID;;chr10:3827389..3827408,-!p1@KLF6!1.28!1347.52!KLF6;;chr6:15246200..15246214,+!p2@JARID2!1.28!48.92!JARID2;;chr9:117150254..117150271,-!p1@AKNA!1.28!48.46!AKNA;;chr9:102584159..102584174,+!p2@NR4A3!1.28!32.51!NR4A3;;chrX:153305787..153305807,-!p3@MECP2!1.28!18.27!MECP2;;chr1:59249688..59249703,-!p3@JUN!1.25!100.01!JUN;;chr2:61108695..61108753,+!p1@REL!1.24!109.45!REL;;chr9:110251836..110251887,-!p4@KLF4!1.24!21.52!KLF4;;chrY:21906594..21906622,-!p1@KDM5D!1.24!16.26!KDM5D;;chr17:38498594..38498661,+!p2@RARA!1.23!53.41!RARA;;chr3:101568349..101568365,+!p1@NFKBIZ!1.22!793.74!NFKBIZ;;chr10:51572408..51572454,+!p3@NCOA4!1.22!89.33!NCOA4;;chr6:144385698..144385742,-!p2@PLAGL1!1.22!19.04!PLAGL1;;chr19:45971060..45971122,+!p3@FOSB!1.22!15.64!FOSB;;chr10:104154246..104154347,+!p3@NFKB2!1.21!91.50!NFKB2;;chr8:81397820..81397836,+!p2@ZBTB10!1.21!18.89!ZBTB10;;chr17:38497662..38497713,+!p4@RARA!1.21!17.80!RARA;;chr12:72056749..72056767,+!p6@THAP2!1.21!16.72!THAP2;;chr6:44233252..44233296,-!p1@NFKBIE!1.20!142.74!NFKBIE;;chr10:94449703..94449718,+!p1@HHEX!1.20!56.82!HHEX;;chr12:52431016..52431071,+!p4@NR4A1!1.20!17.18!NR4A1;;chr2:68592394..68592405,+!p2@PLEK!1.20!14.71!PLEK;;chr4:38665769..38665801,+!p2@KLF3!1.18!126.18!KLF3;;chr2:97202480..97202499,+!p1@ARID5A!1.17!139.33!ARID5A;;chr1:212782094..212782109,+!p1@ATF3!1.16!365.68!ATF3;;chr7:17338324..17338341,+!p3@AHR!1.16!44.90!AHR;;chr3:101546827..101546847,+!p2@NFKBIZ!1.16!18.89!NFKBIZ;;chr2:61108808..61108821,+!p3@REL!1.16!16.87!REL;;chr1:59249707..59249727,-!p1@JUN!1.15!538.91!JUN;;chr17:38498402..38498445,+!p3@RARA!1.15!47.06!RARA;;chr19:13213662..13213686,-!p1@LYL1!1.15!19.51!LYL1;;chr19:45251395..45251432,+!p8@BCL3!1.15!13.00!BCL3;;chr4:103422499..103422632,+!p1@NFKB1!1.14!267.99!NFKB1;;chr1:156470515..156470542,-!p2@MEF2D!1.14!66.88!MEF2D;;chr9:3525727..3525828,-!p2@RFX3!1.14!32.67!RFX3;;chr20:48807456..48807475,+!p3@CEBPB!1.14!24.46!CEBPB;;chr7:115670804..115670825,-!p1@TFEC!1.14!12.69!TFEC;;chr7:17338266..17338282,+!p1@AHR!1.13!135.00!AHR;;chrX:129244454..129244488,-!p1@ELF4!1.13!90.26!ELF4;;chr20:56195474..56195506,-!p1@ZBP1!1.13!12.39!ZBP1;;chr8:103667935..103667960,-!p1@KLF10!1.12!532.88!KLF10;;chr11:128563948..128564003,+!p1@FLI1!1.12!145.68!FLI1;;chr4:106068026..106068084,+!p1@TET2!1.12!109.76!TET2;;chr7:149470641..149470694,-!p1@ZNF467!1.12!55.27!ZNF467;;chr7:104654690..104654704,+!p2@MLL5!1.12!24.15!MLL5;;chr20:50159198..50159299,-!p1@NFATC2!1.12!17.96!NFATC2;;chr6:106534192..106534224,+!p1@PRDM1!1.11!33.75!PRDM1;;chr6:106534230..106534254,+!p2@PRDM1!1.11!29.88!PRDM1;;chrX:106960249..106960260,-!p5@TSC22D3!1.11!19.04!TSC22D3;;chr10:8096772..8096787,+!p2@GATA3!1.11!14.09!GATA3;;chr10:135044190..135044229,+!p3@UTF1!1.11!11.77!UTF1;;chr1:151030536..151030549,+!p8@MLLT11!1.11!11.77!MLLT11;;chr1:157108130..157108173,-!p1@ETV3!1.10!83.76!ETV3;;chr19:45250948..45250998,+!p3@BCL3!1.10!29.26!BCL3;;chr8:123793988..123794016,+!p1@ZHX2!1.10!20.59!ZHX2;;chr5:142782823..142782854,-!p3@NR3C1!1.10!16.57!NR3C1;;chr2:208394817..208394834,+!p3@CREB1!1.09!45.67!CREB1;;chr2:61108878..61108891,+!p5@REL!1.09!11.30!REL;;chrX:129244430..129244442,-!p5@ELF4!1.09!11.30!ELF4;;chr19:18392422..18392440,-!p1@JUND!1.08!1509.61!JUND;;chr6:15246261..15246312,+!p1@JARID2!1.08!271.24!JARID2;;chr14:35872453..35872485,-!p2@NFKBIA!1.08!27.09!NFKBIA;;chr7:128577972..128578047,+!p1@IRF5!1.08!17.34!IRF5;;chr19:45972701..45972774,+!p2@FOSB!1.08!15.02!FOSB;;chr2:231090433..231090469,+!p1@SP140!1.08!10.99!SP140;;chr2:238600998..238601013,+!p5@LRRFIP1!1.08!10.99!LRRFIP1;;chr2:8822176..8822196,+!p1@ID2!1.07!1497.38!ID2;;chr5:176735063..176735088,-!p2@MXD3!1.07!10.68!MXD3;;chr9:129567282..129567353,+!p1@ZBTB43!1.06!138.10!ZBTB43;;chr20:48807430..48807439,+!p8@CEBPB!1.06!15.79!CEBPB;;chr2:10183651..10183713,+!p1@KLF11!1.05!74.78!KLF11;;chr19:33793430..33793447,-!p1@CEBPA!1.05!43.66!CEBPA;;chr6:15246217..15246228,+!p3@JARID2!1.05!18.27!JARID2;;chr9:102584278..102584285,+!p5@NR4A3!1.05!10.22!NR4A3;;chr11:47399920..47399931,-!p7@SPI1!1.05!10.22!SPI1;;chr2:28615716..28615733,+!p1@FOSL2!1.04!476.99!FOSL2;;chr19:6110474..6110551,-!p1@RFX2!1.04!61.93!RFX2;;chr15:60884706..60884743,-!p1@RORA!1.04!52.64!RORA;;chr12:54694758..54694805,-!p1@NFE2!1.04!12.08!NFE2;;chr7:50344251..50344288,+!p3@IKZF1!1.04!10.06!IKZF1;;chrY:2803415..2803468,+!p1@ZFY!1.04!10.06!ZFY;;chr19:45504688..45504782,+!p1@RELB!1.03!60.22!RELB;;chr3:23986824..23986848,+!p2@NR1D2!1.03!55.58!NR1D2;;chr3:150126904..150126958,+!p7@TSC22D2!1.03!17.18!TSC22D2;;chr11:113930425..113930471,+!p1@ZBTB16!1.03!14.09!ZBTB16;;chr14:75746722..75746777,+!p2@FOS!1.03!12.39!FOS;;chr17:38020392..38020477,-!p1@IKZF3!1.03!9.75!IKZF3;;chr5:153857778..153857794,-!p1@HAND1!1.03!9.60!HAND1;;chr2:28616358..28616380,+!p3@FOSL2!1.02!50.01!FOSL2;;chr3:5020939..5020952,+!p2@BHLHE40!1.02!30.19!BHLHE40;;chr8:81397876..81397898,+!p5@ZBTB10!1.02!11.30!ZBTB10;;chr3:5021113..5021180,+!p1@BHLHE40!1.01!651.16!BHLHE40;;chr1:156470494..156470505,-!p3@MEF2D!1.01!13.62!MEF2D;;chr2:208031943..208031978,-!p5@KLF7!1.01!12.54!KLF7;;chr5:131826457..131826514,-!p1@IRF1!1.00!360.26!IRF1;;chr9:102584128..102584144,+!p3@NR4A3!1.00!17.34!NR4A3;;chr9:110252074..110252079,-!p3@KLF4!1.00!15.17!KLF4;;chr21:36260343..36260402,-!p6@RUNX1!1.00!14.55!RUNX1;;chr2:8819364..8819390,+!p2@ID2!1.00!8.98!ID2;;chr22:38597987..38598021,+!p2@MAFF!0.99!54.50!MAFF;;chr19:50922187..50922204,+!p1@SPIB!0.99!8.82!SPIB;;chr19:54041645..54041661,+!p5@ZNF331!0.99!8.82!ZNF331;;chr13:41593425..41593480,-!p1@ELF1!0.98!56.20!ELF1;;chr21:36421535..36421610,-!p2@RUNX1!0.98!31.12!RUNX1;;chr2:61108771..61108789,+!p4@REL!0.98!13.16!REL;;chr7:106809470..106809481,+!p2@HBP1!0.98!12.08!HBP1;;chr8:81397846..81397860,+!p3@ZBTB10!0.98!10.68!ZBTB10;;chr2:70142189..70142223,+!p2@MXD1!0.97!61.62!MXD1;;chr19:42636586..42636607,-!p1@POU2F2!0.97!23.69!POU2F2;;chr10:35416142..35416169,+!p3@CREM!0.97!22.76!CREM;;chr19:47616992..47617011,-!p4@ZC3H4!0.97!18.27!ZC3H4;;chr14:35874077..35874091,-!p8@NFKBIA!0.97!8.36!NFKBIA;;chr1:37940170..37940190,+!p1@ZC3H12A!0.96!102.49!ZC3H12A;;chr18:77155922..77155939,+!p1@NFATC1!0.96!22.76!NFATC1;;chr19:50432132..50432217,+!p2@ATF5!0.96!9.75!ATF5;;chr8:53373491..53373506,-!p4@ST18!0.96!8.21!ST18;;chr3:63953435..63953499,+!p1@ATXN7!0.96!8.05!ATXN7;;chr10:104155480..104155534,+!p2@NFKB2!0.95!52.48!NFKB2;;chr14:74226747..74226779,-!p3@C14orf43!0.95!45.52!C14orf43;;chr2:238600933..238600985,+!p3@LRRFIP1!0.95!44.59!LRRFIP1;;chr14:64971288..64971316,-!p2@ZBTB25!0.95!24.93!ZBTB25;;chr10:43932296..43932360,+!p1@ZNF487P!0.95!16.87!ZNF487P;;chr13:41593392..41593403,-!p7@ELF1!0.95!7.90!ELF1;;chr3:193853927..193853944,+!p1@HES1!0.94!262.72!HES1;;chr4:38665810..38665827,+!p1@KLF3!0.94!115.96!KLF3;;chr2:28618532..28618610,+!p4@FOSL2!0.94!13.31!FOSL2;;chr6:106546808..106546833,+!p3@PRDM1!0.94!9.75!PRDM1;;chr9:110250629..110250642,-!p7@KLF4!0.94!7.74!KLF4;;chr7:104654718..104654741,+!p3@MLL5!0.93!11.15!MLL5;;chr2:192015677..192015691,-!p3@STAT4!0.93!7.59!STAT4;;chr4:57522598..57522664,-!p3@HOPX!0.93!7.59!HOPX;;chr2:157189617..15718966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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000094;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000763;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000766;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000767;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988
|ffid_belonging_in_development=CL:0000049,CL:0000134
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 66: Line 41:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Basophils%252c%2520donor3.CNhs12575.12243-129H2.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Basophils%252c%2520donor3.CNhs12575.12243-129H2.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Basophils%252c%2520donor3.CNhs12575.12243-129H2.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Basophils%252c%2520donor3.CNhs12575.12243-129H2.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Basophils%252c%2520donor3.CNhs12575.12243-129H2.hg38.nobarcode.ctss.bed.gz
|id=FF:12243-129H2
|is_a=EFO:0002091;;FF:0000212
|is_obsolete=
|library_id=CNhs12575
|library_id_phase_based=2:CNhs12575
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12243
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12243
|name=Basophils, donor3
|namespace=
|part_of=
|profile_cagescan=,,,
|profile_hcage=CNhs12575,LSID917,release012,COMPLETED
|profile_rnaseq=
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|rna_box=129
|rna_catalog_number=3H100-93-5
|rna_concentration=0.29348
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0
|rna_lot_number=
|rna_od260/230=1.75
|rna_od260/280=2.02
|rna_position=H2
|rna_rin=9.3
|rna_sample_type=total RNA
|rna_tube_id=129H2
|rna_weight_ug=3.52176
|sample_age=
|sample_category=primary cells
|sample_cell_catalog=N/A
|sample_cell_line=
|sample_cell_lot=lot:BASO743
|sample_cell_type=basophil
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=3HBiomedical
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.60687168924739e-217!GO:0043227;membrane-bound organelle;2.12425372903286e-149!GO:0043231;intracellular membrane-bound organelle;3.30524274902506e-149!GO:0043226;organelle;1.53945061803753e-146!GO:0043229;intracellular organelle;8.19141579484363e-146!GO:0005737;cytoplasm;3.08767523982193e-143!GO:0005515;protein binding;2.18978508868984e-92!GO:0044422;organelle part;1.24194768263372e-85!GO:0044444;cytoplasmic part;1.83141937454869e-85!GO:0044446;intracellular organelle part;5.34685704013911e-84!GO:0043170;macromolecule metabolic process;5.16231165204822e-79!GO:0005634;nucleus;2.6475953259775e-74!GO:0044238;primary metabolic process;3.04275132097282e-73!GO:0044237;cellular metabolic process;5.16472457888226e-73!GO:0032991;macromolecular complex;1.05461831385703e-69!GO:0003723;RNA binding;1.1234749439532e-60!GO:0030529;ribonucleoprotein complex;1.97709655473948e-57!GO:0044428;nuclear part;3.20314152431677e-57!GO:0043283;biopolymer metabolic process;7.914197012245e-52!GO:0019538;protein metabolic process;5.84711784462011e-50!GO:0043233;organelle lumen;3.72705969309433e-47!GO:0031974;membrane-enclosed lumen;3.72705969309433e-47!GO:0044267;cellular protein metabolic process;2.41154571576969e-46!GO:0010467;gene expression;4.14331473746651e-46!GO:0044260;cellular macromolecule metabolic process;6.89367453325826e-46!GO:0033036;macromolecule localization;2.86918455747271e-43!GO:0015031;protein transport;1.06527368510411e-42!GO:0006412;translation;3.0937859979975e-42!GO:0045184;establishment of protein localization;6.00877653469607e-42!GO:0008104;protein localization;1.78769330612084e-40!GO:0016043;cellular component organization and biogenesis;6.91766419600765e-38!GO:0031981;nuclear lumen;1.08028690378609e-36!GO:0043234;protein complex;2.63431611264964e-36!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.65317160617106e-35!GO:0005829;cytosol;9.53452171866862e-34!GO:0006915;apoptosis;2.65075562662636e-33!GO:0012501;programmed cell death;2.66623565214574e-33!GO:0016071;mRNA metabolic process;3.06453524721985e-33!GO:0006396;RNA processing;9.10441640148385e-33!GO:0031090;organelle membrane;3.37024522906406e-32!GO:0008219;cell death;2.41579437988812e-31!GO:0016265;death;2.41579437988812e-31!GO:0005840;ribosome;5.1025270307442e-31!GO:0009059;macromolecule biosynthetic process;9.82398787167607e-31!GO:0008380;RNA splicing;2.38236778222156e-30!GO:0005739;mitochondrion;2.98652358125186e-30!GO:0046907;intracellular transport;4.19155014684229e-29!GO:0006397;mRNA processing;5.51538999923679e-28!GO:0003735;structural constituent of ribosome;6.11649609385481e-28!GO:0006886;intracellular protein transport;8.41879069174295e-28!GO:0031967;organelle envelope;1.42229806522812e-27!GO:0031975;envelope;2.5266301450977e-27!GO:0033279;ribosomal subunit;4.0755844429988e-27!GO:0065003;macromolecular complex assembly;5.47857289964384e-27!GO:0008134;transcription factor binding;7.72280957650063e-27!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.68714141842734e-26!GO:0022607;cellular component assembly;6.5169288263389e-25!GO:0044249;cellular biosynthetic process;8.63664119395299e-25!GO:0003676;nucleic acid binding;9.88895704596888e-25!GO:0005654;nucleoplasm;1.04176370227469e-24!GO:0009058;biosynthetic process;2.63306538359859e-24!GO:0050794;regulation of cellular process;1.76398784643308e-23!GO:0044429;mitochondrial part;5.97971065448035e-23!GO:0016070;RNA metabolic process;6.58360447696008e-23!GO:0044445;cytosolic part;1.84015202183042e-22!GO:0051649;establishment of cellular localization;2.93717386688451e-22!GO:0051641;cellular localization;3.27511152655425e-22!GO:0005681;spliceosome;3.66304024780015e-22!GO:0043412;biopolymer modification;6.1197718322847e-22!GO:0044451;nucleoplasm part;3.17202750622509e-21!GO:0006996;organelle organization and biogenesis;3.19486450522312e-21!GO:0042981;regulation of apoptosis;4.18113370362604e-21!GO:0043067;regulation of programmed cell death;9.10549117518604e-21!GO:0006464;protein modification process;2.44371243486843e-20!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.30120682022408e-20!GO:0050789;regulation of biological process;1.6257237881924e-19!GO:0048523;negative regulation of cellular process;1.91589450764317e-19!GO:0043687;post-translational protein modification;2.67135566892718e-19!GO:0000166;nucleotide binding;3.81934019226442e-19!GO:0006366;transcription from RNA polymerase II promoter;4.14973409979918e-19!GO:0005740;mitochondrial envelope;1.57443577778159e-17!GO:0006512;ubiquitin cycle;1.81078212451384e-17!GO:0006259;DNA metabolic process;1.8173194741519e-17!GO:0044265;cellular macromolecule catabolic process;2.30026443172709e-17!GO:0003712;transcription cofactor activity;2.90209173996845e-17!GO:0016192;vesicle-mediated transport;3.35682775027519e-17!GO:0022618;protein-RNA complex assembly;3.59756525622525e-17!GO:0031966;mitochondrial membrane;4.05311207024561e-17!GO:0048519;negative regulation of biological process;5.28765021645627e-17!GO:0019941;modification-dependent protein catabolic process;7.37995559723047e-17!GO:0043632;modification-dependent macromolecule catabolic process;7.37995559723047e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;7.4280999392737e-17!GO:0006511;ubiquitin-dependent protein catabolic process;9.98021629211246e-17!GO:0044257;cellular protein catabolic process;1.38143620880823e-16!GO:0007243;protein kinase cascade;3.35134928189454e-16!GO:0019866;organelle inner membrane;4.99057253577934e-16!GO:0006119;oxidative phosphorylation;6.37331619736572e-16!GO:0006793;phosphorus metabolic process;7.01314494454769e-16!GO:0006796;phosphate metabolic process;7.01314494454769e-16!GO:0048770;pigment granule;1.18860079058028e-15!GO:0042470;melanosome;1.18860079058028e-15!GO:0007242;intracellular signaling cascade;1.29629787580198e-15!GO:0043285;biopolymer catabolic process;2.99762791426656e-15!GO:0065007;biological regulation;4.74241703745948e-15!GO:0043228;non-membrane-bound organelle;5.36585474881921e-15!GO:0043232;intracellular non-membrane-bound organelle;5.36585474881921e-15!GO:0006605;protein targeting;8.95356181264303e-15!GO:0051246;regulation of protein metabolic process;3.02348896215208e-14!GO:0015935;small ribosomal subunit;3.35086700317912e-14!GO:0016604;nuclear body;3.79970743973727e-14!GO:0019222;regulation of metabolic process;4.02054942780709e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);4.70753471888101e-14!GO:0007249;I-kappaB kinase/NF-kappaB cascade;6.48491994180483e-14!GO:0015934;large ribosomal subunit;7.59178686119823e-14!GO:0005743;mitochondrial inner membrane;8.02414034246431e-14!GO:0006913;nucleocytoplasmic transport;8.37693791377279e-14!GO:0032553;ribonucleotide binding;9.19512715613527e-14!GO:0032555;purine ribonucleotide binding;9.19512715613527e-14!GO:0016462;pyrophosphatase activity;1.39222612617813e-13!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.43103868945361e-13!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.5630018720505e-13!GO:0016817;hydrolase activity, acting on acid anhydrides;1.71859005078134e-13!GO:0051169;nuclear transport;1.84400171695862e-13!GO:0016310;phosphorylation;2.14997227050473e-13!GO:0031324;negative regulation of cellular metabolic process;2.44740780511783e-13!GO:0017111;nucleoside-triphosphatase activity;2.48033676486478e-13!GO:0008135;translation factor activity, nucleic acid binding;2.60934671375324e-13!GO:0009057;macromolecule catabolic process;2.83168963589341e-13!GO:0030163;protein catabolic process;3.3790332452772e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);9.79144615226448e-13!GO:0048522;positive regulation of cellular process;1.1786142418019e-12!GO:0005773;vacuole;1.49610693191409e-12!GO:0000502;proteasome complex (sensu Eukaryota);1.76474841214328e-12!GO:0016607;nuclear speck;2.36269178987645e-12!GO:0017076;purine nucleotide binding;2.6865284970659e-12!GO:0044455;mitochondrial membrane part;2.96924728373909e-12!GO:0009892;negative regulation of metabolic process;2.98015706779658e-12!GO:0065009;regulation of a molecular function;3.90416419348939e-12!GO:0016564;transcription repressor activity;4.09350676987212e-12!GO:0006457;protein folding;4.67045224273495e-12!GO:0043069;negative regulation of programmed cell death;5.0401526809016e-12!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;5.67151024740355e-12!GO:0043066;negative regulation of apoptosis;6.1808658927095e-12!GO:0016874;ligase activity;6.30730265474441e-12!GO:0006413;translational initiation;6.6333856195545e-12!GO:0007049;cell cycle;7.35130028739879e-12!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;8.48815772798569e-12!GO:0012505;endomembrane system;8.48815772798569e-12!GO:0016481;negative regulation of transcription;1.2513610056598e-11!GO:0006325;establishment and/or maintenance of chromatin architecture;1.3005281183242e-11!GO:0003743;translation initiation factor activity;1.37720945289039e-11!GO:0000323;lytic vacuole;1.42583950227456e-11!GO:0005764;lysosome;1.42583950227456e-11!GO:0005768;endosome;1.64043136924652e-11!GO:0048518;positive regulation of biological process;1.80765324744969e-11!GO:0005730;nucleolus;1.94092734816385e-11!GO:0005794;Golgi apparatus;2.47578915135881e-11!GO:0006357;regulation of transcription from RNA polymerase II promoter;2.53833616539733e-11!GO:0044248;cellular catabolic process;3.35803229188815e-11!GO:0006916;anti-apoptosis;4.16742178466392e-11!GO:0006323;DNA packaging;5.95695951861841e-11!GO:0003713;transcription coactivator activity;8.74999756890673e-11!GO:0002376;immune system process;8.85937081501306e-11!GO:0006446;regulation of translational initiation;9.51040610208447e-11!GO:0031323;regulation of cellular metabolic process;1.22405179089713e-10!GO:0016563;transcription activator activity;1.22405179089713e-10!GO:0000398;nuclear mRNA splicing, via spliceosome;1.60461275597404e-10!GO:0000375;RNA splicing, via transesterification reactions;1.60461275597404e-10!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.60461275597404e-10!GO:0005635;nuclear envelope;1.72059675997317e-10!GO:0005524;ATP binding;2.02257357704598e-10!GO:0005746;mitochondrial respiratory chain;2.0929951767143e-10!GO:0032559;adenyl ribonucleotide binding;4.15276867441212e-10!GO:0007264;small GTPase mediated signal transduction;6.59511167614248e-10!GO:0008639;small protein conjugating enzyme activity;8.65087476359099e-10!GO:0051726;regulation of cell cycle;1.35465962361396e-09!GO:0005783;endoplasmic reticulum;1.36160847387329e-09!GO:0004842;ubiquitin-protein ligase activity;1.42807085738971e-09!GO:0050136;NADH dehydrogenase (quinone) activity;1.6852908859709e-09!GO:0003954;NADH dehydrogenase activity;1.6852908859709e-09!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.6852908859709e-09!GO:0048193;Golgi vesicle transport;1.75446561492982e-09!GO:0010468;regulation of gene expression;1.81919739730578e-09!GO:0000074;regulation of progression through cell cycle;1.99542778007733e-09!GO:0048468;cell development;2.14610572242378e-09!GO:0017038;protein import;2.37318013225185e-09!GO:0019787;small conjugating protein ligase activity;2.831557879487e-09!GO:0006417;regulation of translation;3.71217133959254e-09!GO:0031965;nuclear membrane;3.91350873443614e-09!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;4.36543919998295e-09!GO:0051276;chromosome organization and biogenesis;4.43595037163533e-09!GO:0016568;chromatin modification;4.55600027340764e-09!GO:0043065;positive regulation of apoptosis;8.41602519853996e-09!GO:0009966;regulation of signal transduction;9.10957215331415e-09!GO:0043068;positive regulation of programmed cell death;1.12332341760303e-08!GO:0030554;adenyl nucleotide binding;1.16454595493959e-08!GO:0005793;ER-Golgi intermediate compartment;1.46196888629041e-08!GO:0009967;positive regulation of signal transduction;1.90741492358349e-08!GO:0051170;nuclear import;2.3033917186463e-08!GO:0051186;cofactor metabolic process;2.34186137521766e-08!GO:0042775;organelle ATP synthesis coupled electron transport;2.71531829372332e-08!GO:0042773;ATP synthesis coupled electron transport;2.71531829372332e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.87703371259338e-08!GO:0050790;regulation of catalytic activity;2.9007371729934e-08!GO:0006606;protein import into nucleus;2.98204687993062e-08!GO:0006350;transcription;3.26245509598881e-08!GO:0016772;transferase activity, transferring phosphorus-containing groups;3.48698040484064e-08!GO:0005770;late endosome;3.49907618552306e-08!GO:0019899;enzyme binding;3.64220525138735e-08!GO:0006950;response to stress;4.31934384872678e-08!GO:0051082;unfolded protein binding;4.39255444218333e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;4.9753949772673e-08!GO:0019829;cation-transporting ATPase activity;5.09247438349535e-08!GO:0044453;nuclear membrane part;5.19717833787246e-08!GO:0030964;NADH dehydrogenase complex (quinone);6.39783276933213e-08!GO:0045271;respiratory chain complex I;6.39783276933213e-08!GO:0005747;mitochondrial respiratory chain complex I;6.39783276933213e-08!GO:0006461;protein complex assembly;6.65678063825296e-08!GO:0045786;negative regulation of progression through cell cycle;6.81274699152565e-08!GO:0003714;transcription corepressor activity;8.28794610771563e-08!GO:0045892;negative regulation of transcription, DNA-dependent;1.07896930339503e-07!GO:0022402;cell cycle process;1.11843269446916e-07!GO:0003924;GTPase activity;1.2539686273613e-07!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.28916216205296e-07!GO:0006955;immune response;1.30013319782116e-07!GO:0031326;regulation of cellular biosynthetic process;1.60218770223653e-07!GO:0016881;acid-amino acid ligase activity;1.76077663635581e-07!GO:0031980;mitochondrial lumen;1.86681697867801e-07!GO:0005759;mitochondrial matrix;1.86681697867801e-07!GO:0009889;regulation of biosynthetic process;1.9831909309141e-07!GO:0044432;endoplasmic reticulum part;2.27568708480907e-07!GO:0006917;induction of apoptosis;2.55605233009956e-07!GO:0008565;protein transporter activity;2.8087108290228e-07!GO:0006974;response to DNA damage stimulus;3.09167710003881e-07!GO:0012502;induction of programmed cell death;3.96589314173641e-07!GO:0015986;ATP synthesis coupled proton transport;4.24482468059751e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.24482468059751e-07!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.47265505701047e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.54191803696188e-07!GO:0044440;endosomal part;5.91838329213727e-07!GO:0010008;endosome membrane;5.91838329213727e-07!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;6.02377167430914e-07!GO:0006732;coenzyme metabolic process;8.45766704179926e-07!GO:0050657;nucleic acid transport;8.49739820601984e-07!GO:0051236;establishment of RNA localization;8.49739820601984e-07!GO:0050658;RNA transport;8.49739820601984e-07!GO:0032446;protein modification by small protein conjugation;1.02723606014847e-06!GO:0009152;purine ribonucleotide biosynthetic process;1.19565001566594e-06!GO:0009259;ribonucleotide metabolic process;1.29526429858103e-06!GO:0006403;RNA localization;1.31763770931823e-06!GO:0004386;helicase activity;1.33527426390688e-06!GO:0008047;enzyme activator activity;1.47742585740328e-06!GO:0009150;purine ribonucleotide metabolic process;1.50890935504447e-06!GO:0042623;ATPase activity, coupled;1.67906737180482e-06!GO:0016567;protein ubiquitination;1.68397647388754e-06!GO:0006164;purine nucleotide biosynthetic process;1.77243536200664e-06!GO:0008026;ATP-dependent helicase activity;1.81127445992305e-06!GO:0005643;nuclear pore;1.81747324978454e-06!GO:0009260;ribonucleotide biosynthetic process;1.87860933136387e-06!GO:0005525;GTP binding;1.91531095536743e-06!GO:0006163;purine nucleotide metabolic process;1.98650913832889e-06!GO:0065004;protein-DNA complex assembly;2.04230520350304e-06!GO:0004674;protein serine/threonine kinase activity;2.79170917932376e-06!GO:0015078;hydrogen ion transmembrane transporter activity;3.14942577687678e-06!GO:0009056;catabolic process;3.33332772177196e-06!GO:0016469;proton-transporting two-sector ATPase complex;3.60739470820391e-06!GO:0006333;chromatin assembly or disassembly;3.60814141139775e-06!GO:0030695;GTPase regulator activity;3.71995599102949e-06!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.88331917534617e-06!GO:0045449;regulation of transcription;3.92909502162513e-06!GO:0016887;ATPase activity;4.29626334250809e-06!GO:0005839;proteasome core complex (sensu Eukaryota);4.59880796232492e-06!GO:0008632;apoptotic program;5.25895755326999e-06!GO:0007265;Ras protein signal transduction;5.35921326478949e-06!GO:0016787;hydrolase activity;5.51677290183294e-06!GO:0006351;transcription, DNA-dependent;5.57374822691567e-06!GO:0032774;RNA biosynthetic process;5.72813395289745e-06!GO:0045321;leukocyte activation;5.87732568375935e-06!GO:0009893;positive regulation of metabolic process;5.90649493899274e-06!GO:0048475;coated membrane;6.72054357866145e-06!GO:0030117;membrane coat;6.72054357866145e-06!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;7.05826611848473e-06!GO:0016044;membrane organization and biogenesis;7.38279128033353e-06!GO:0009615;response to virus;7.54286683025269e-06!GO:0045941;positive regulation of transcription;7.65803760688113e-06!GO:0031252;leading edge;8.85163158439733e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;8.95177027913068e-06!GO:0009142;nucleoside triphosphate biosynthetic process;9.04737209946779e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;9.04737209946779e-06!GO:0006754;ATP biosynthetic process;9.11794823906219e-06!GO:0006753;nucleoside phosphate metabolic process;9.11794823906219e-06!GO:0009060;aerobic respiration;9.45153291695616e-06!GO:0005774;vacuolar membrane;9.5087953419358e-06!GO:0016197;endosome transport;1.05049464203178e-05!GO:0030120;vesicle coat;1.0878362807796e-05!GO:0030662;coated vesicle membrane;1.0878362807796e-05!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.11241530320192e-05!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.11241530320192e-05!GO:0031982;vesicle;1.54212370318081e-05!GO:0003697;single-stranded DNA binding;1.5591153505291e-05!GO:0009199;ribonucleoside triphosphate metabolic process;1.64950757638252e-05!GO:0002757;immune response-activating signal transduction;1.71098448414845e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.76633413327218e-05!GO:0045893;positive regulation of transcription, DNA-dependent;1.77204597516331e-05!GO:0051336;regulation of hydrolase activity;1.77400801371019e-05!GO:0042254;ribosome biogenesis and assembly;1.90395572462077e-05!GO:0030532;small nuclear ribonucleoprotein complex;1.91438707163891e-05!GO:0002764;immune response-regulating signal transduction;1.95096993632236e-05!GO:0051028;mRNA transport;2.00765724711614e-05!GO:0065002;intracellular protein transport across a membrane;2.0147369592147e-05!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.0147369592147e-05!GO:0009144;purine nucleoside triphosphate metabolic process;2.0147369592147e-05!GO:0016740;transferase activity;2.27964362486578e-05!GO:0043566;structure-specific DNA binding;2.43207566060466e-05!GO:0004298;threonine endopeptidase activity;2.43207566060466e-05!GO:0005789;endoplasmic reticulum membrane;2.43207566060466e-05!GO:0032561;guanyl ribonucleotide binding;2.43207566060466e-05!GO:0019001;guanyl nucleotide binding;2.43207566060466e-05!GO:0051338;regulation of transferase activity;2.44398487112506e-05!GO:0046034;ATP metabolic process;2.4642555566361e-05!GO:0006281;DNA repair;2.58627035735199e-05!GO:0016301;kinase activity;2.89511829156766e-05!GO:0005765;lysosomal membrane;2.95673345469374e-05!GO:0005761;mitochondrial ribosome;3.16150834404206e-05!GO:0000313;organellar ribosome;3.16150834404206e-05!GO:0016773;phosphotransferase activity, alcohol group as acceptor;3.29851847949662e-05!GO:0000785;chromatin;3.47198651748562e-05!GO:0030036;actin cytoskeleton organization and biogenesis;3.47198651748562e-05!GO:0009141;nucleoside triphosphate metabolic process;3.50901182448633e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;3.78751133582888e-05!GO:0045333;cellular respiration;3.8323450396424e-05!GO:0045259;proton-transporting ATP synthase complex;3.8323450396424e-05!GO:0043549;regulation of kinase activity;3.83444081290108e-05!GO:0006401;RNA catabolic process;3.83444081290108e-05!GO:0007005;mitochondrion organization and biogenesis;3.83783736229158e-05!GO:0005083;small GTPase regulator activity;4.02351661961753e-05!GO:0005694;chromosome;4.21869617222714e-05!GO:0006888;ER to Golgi vesicle-mediated transport;4.55181665279062e-05!GO:0006613;cotranslational protein targeting to membrane;5.08222588455696e-05!GO:0051188;cofactor biosynthetic process;5.39990905425159e-05!GO:0044437;vacuolar part;5.62414696637936e-05!GO:0046649;lymphocyte activation;6.04794966978111e-05!GO:0031988;membrane-bound vesicle;6.07879610395065e-05!GO:0046930;pore complex;6.55407050381611e-05!GO:0042110;T cell activation;6.78389375192871e-05!GO:0031410;cytoplasmic vesicle;6.87299696547161e-05!GO:0002429;immune response-activating cell surface receptor signaling pathway;6.98242892045494e-05!GO:0009055;electron carrier activity;7.44333818838975e-05!GO:0005096;GTPase activator activity;7.47075108581849e-05!GO:0009719;response to endogenous stimulus;7.64190181239387e-05!GO:0005057;receptor signaling protein activity;7.65438445434461e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;7.77433013720739e-05!GO:0002768;immune response-regulating cell surface receptor signaling pathway;7.84198932425956e-05!GO:0045859;regulation of protein kinase activity;8.16156171360108e-05!GO:0006468;protein amino acid phosphorylation;8.68861206437048e-05!GO:0060090;molecular adaptor activity;8.80996467625123e-05!GO:0031902;late endosome membrane;9.36940697014791e-05!GO:0031325;positive regulation of cellular metabolic process;9.77121721132396e-05!GO:0006355;regulation of transcription, DNA-dependent;0.000114551509173547!GO:0005769;early endosome;0.000120489565176114!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000125944464987115!GO:0051168;nuclear export;0.000129303905862419!GO:0016023;cytoplasmic membrane-bound vesicle;0.000138747031947766!GO:0051427;hormone receptor binding;0.000144798665690412!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.0001495213603173!GO:0000245;spliceosome assembly;0.000149800910450417!GO:0005667;transcription factor complex;0.000149800910450417!GO:0051090;regulation of transcription factor activity;0.000156482705908625!GO:0000151;ubiquitin ligase complex;0.000166429810201742!GO:0001816;cytokine production;0.000169950263580774!GO:0035257;nuclear hormone receptor binding;0.000256465503651122!GO:0008234;cysteine-type peptidase activity;0.000256465503651122!GO:0006099;tricarboxylic acid cycle;0.000260507012349252!GO:0046356;acetyl-CoA catabolic process;0.000260507012349252!GO:0003729;mRNA binding;0.00027043536067144!GO:0005885;Arp2/3 protein complex;0.000281387513971605!GO:0001775;cell activation;0.00028349997970538!GO:0043623;cellular protein complex assembly;0.00028349997970538!GO:0007050;cell cycle arrest;0.000295805685131012!GO:0006402;mRNA catabolic process;0.000308103470010272!GO:0000278;mitotic cell cycle;0.000311927301441977!GO:0008654;phospholipid biosynthetic process;0.000326008486405215!GO:0043281;regulation of caspase activity;0.000328221030112126!GO:0009108;coenzyme biosynthetic process;0.000335171935428356!GO:0003724;RNA helicase activity;0.000335171935428356!GO:0046983;protein dimerization activity;0.00038041331052406!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000384099063384802!GO:0030029;actin filament-based process;0.000412629355029534!GO:0046822;regulation of nucleocytoplasmic transport;0.000449487856759219!GO:0006897;endocytosis;0.000453370407898561!GO:0010324;membrane invagination;0.000453370407898561!GO:0016363;nuclear matrix;0.000475496372560257!GO:0044427;chromosomal part;0.000488863152251472!GO:0006260;DNA replication;0.000509283532281891!GO:0001726;ruffle;0.000534074306620866!GO:0019904;protein domain specific binding;0.000572762724487393!GO:0042802;identical protein binding;0.000581945947193973!GO:0006752;group transfer coenzyme metabolic process;0.000584458198901874!GO:0044431;Golgi apparatus part;0.000584458198901874!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000636047150381074!GO:0032940;secretion by cell;0.0006461957975043!GO:0033116;ER-Golgi intermediate compartment membrane;0.000668003430962699!GO:0016072;rRNA metabolic process;0.000743320838505857!GO:0048471;perinuclear region of cytoplasm;0.000759798779424875!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000762862174368159!GO:0031497;chromatin assembly;0.000808595365894706!GO:0006612;protein targeting to membrane;0.000825016955183151!GO:0050851;antigen receptor-mediated signaling pathway;0.00083072544537501!GO:0006334;nucleosome assembly;0.000831358377406668!GO:0006084;acetyl-CoA metabolic process;0.000833479085356264!GO:0005070;SH3/SH2 adaptor activity;0.000847069128524038!GO:0005798;Golgi-associated vesicle;0.000851929709104341!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000851929709104341!GO:0006364;rRNA processing;0.000871904393142458!GO:0030097;hemopoiesis;0.000922661986816797!GO:0007034;vacuolar transport;0.000931600979236626!GO:0006919;caspase activation;0.00102845360890392!GO:0051187;cofactor catabolic process;0.00117180581494941!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00118884905154578!GO:0009607;response to biotic stimulus;0.00122779448217032!GO:0007040;lysosome organization and biogenesis;0.00128195925160396!GO:0051223;regulation of protein transport;0.00129846512248114!GO:0001819;positive regulation of cytokine production;0.00137678790127327!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00139699867301034!GO:0008637;apoptotic mitochondrial changes;0.00142537924560272!GO:0043021;ribonucleoprotein binding;0.00146538008740075!GO:0051251;positive regulation of lymphocyte activation;0.00156037042515664!GO:0008186;RNA-dependent ATPase activity;0.0016812546701705!GO:0018193;peptidyl-amino acid modification;0.00177252102007148!GO:0019843;rRNA binding;0.00179307172157532!GO:0016311;dephosphorylation;0.00181907576611752!GO:0017091;AU-rich element binding;0.00184476157326836!GO:0050779;RNA destabilization;0.00184476157326836!GO:0000289;poly(A) tail shortening;0.00184476157326836!GO:0001817;regulation of cytokine production;0.00185655326441272!GO:0043280;positive regulation of caspase activity;0.00187462348125558!GO:0008092;cytoskeletal protein binding;0.00199101724453301!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00199530562184984!GO:0051789;response to protein stimulus;0.00216912750329386!GO:0006986;response to unfolded protein;0.00216912750329386!GO:0033673;negative regulation of kinase activity;0.00223916168664668!GO:0006469;negative regulation of protein kinase activity;0.00223916168664668!GO:0003702;RNA polymerase II transcription factor activity;0.00225114139268858!GO:0045637;regulation of myeloid cell differentiation;0.00225114139268858!GO:0043433;negative regulation of transcription factor activity;0.00227086603384283!GO:0009109;coenzyme catabolic process;0.00239952255536746!GO:0033157;regulation of intracellular protein transport;0.00240401591946217!GO:0042306;regulation of protein import into nucleus;0.00240401591946217!GO:0046519;sphingoid metabolic process;0.00270331234307756!GO:0051348;negative regulation of transferase activity;0.00270511640347352!GO:0030118;clathrin coat;0.00272006609140227!GO:0043087;regulation of GTPase activity;0.00272006609140227!GO:0007041;lysosomal transport;0.002744938201448!GO:0005788;endoplasmic reticulum lumen;0.00286871241362485!GO:0005741;mitochondrial outer membrane;0.00287174603719402!GO:0002520;immune system development;0.00288063044263474!GO:0016791;phosphoric monoester hydrolase activity;0.00293804965090756!GO:0043085;positive regulation of catalytic activity;0.00304970956644326!GO:0016779;nucleotidyltransferase activity;0.00316475281218781!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00334224148577482!GO:0015631;tubulin binding;0.00334866357237938!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00338279571327645!GO:0015399;primary active transmembrane transporter activity;0.00338279571327645!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00345335731711315!GO:0005637;nuclear inner membrane;0.00356723179578528!GO:0022415;viral reproductive process;0.0036040846093325!GO:0006672;ceramide metabolic process;0.0036040846093325!GO:0051098;regulation of binding;0.00360704206866329!GO:0006611;protein export from nucleus;0.00369021493926255!GO:0005813;centrosome;0.00371012634754224!GO:0030176;integral to endoplasmic reticulum membrane;0.0037104173802859!GO:0002274;myeloid leukocyte activation;0.00377388706786772!GO:0007033;vacuole organization and biogenesis;0.00377917722917242!GO:0030658;transport vesicle membrane;0.00378427457846352!GO:0030099;myeloid cell differentiation;0.00384571863111999!GO:0004672;protein kinase activity;0.00385006161520566!GO:0004004;ATP-dependent RNA helicase activity;0.00394053361638988!GO:0016251;general RNA polymerase II transcription factor activity;0.00400176100973821!GO:0051235;maintenance of localization;0.00404234450701319!GO:0030384;phosphoinositide metabolic process;0.00404234450701319!GO:0043488;regulation of mRNA stability;0.00427228839938028!GO:0043487;regulation of RNA stability;0.00427228839938028!GO:0045045;secretory pathway;0.00427372272912969!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00427372272912969!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00427372272912969!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00427372272912969!GO:0006352;transcription initiation;0.00450540225179682!GO:0051345;positive regulation of hydrolase activity;0.00456999189644976!GO:0009117;nucleotide metabolic process;0.00457190030627386!GO:0031968;organelle outer membrane;0.00461088954308801!GO:0051092;activation of NF-kappaB transcription factor;0.00511654967938226!GO:0006650;glycerophospholipid metabolic process;0.00520645250251807!GO:0051325;interphase;0.00533702606615109!GO:0006399;tRNA metabolic process;0.00533702606615109!GO:0006818;hydrogen transport;0.00533702606615109!GO:0006984;ER-nuclear signaling pathway;0.00538434873109423!GO:0019867;outer membrane;0.00539537181875076!GO:0008361;regulation of cell size;0.00558286888468474!GO:0015992;proton transport;0.00587703825484832!GO:0019221;cytokine and chemokine mediated signaling pathway;0.00613415087681844!GO:0030867;rough endoplasmic reticulum membrane;0.00623218593912425!GO:0042990;regulation of transcription factor import into nucleus;0.00633418654791406!GO:0042991;transcription factor import into nucleus;0.00633418654791406!GO:0045454;cell redox homeostasis;0.00645220219259349!GO:0004185;serine carboxypeptidase activity;0.00653452089624132!GO:0001836;release of cytochrome c from mitochondria;0.00660244879300337!GO:0051329;interphase of mitotic cell cycle;0.006701273588942!GO:0005099;Ras GTPase activator activity;0.0068501294397549!GO:0030518;steroid hormone receptor signaling pathway;0.00687816104167532!GO:0030149;sphingolipid catabolic process;0.00725330806241402!GO:0048534;hemopoietic or lymphoid organ development;0.00736070633676041!GO:0048487;beta-tubulin binding;0.00737480206439138!GO:0004715;non-membrane spanning protein tyrosine kinase activity;0.00741516057898783!GO:0051252;regulation of RNA metabolic process;0.0074552074560891!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.00762105415064317!GO:0043300;regulation of leukocyte degranulation;0.00786836135421596!GO:0001772;immunological synapse;0.00803783466594276!GO:0051101;regulation of DNA binding;0.00812189492478164!GO:0045944;positive regulation of transcription from RNA polymerase II promoter;0.00815525923425442!GO:0031625;ubiquitin protein ligase binding;0.00841387240006666!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0085745091282523!GO:0051091;positive regulation of transcription factor activity;0.00865466614021243!GO:0048500;signal recognition particle;0.00873381351834263!GO:0042613;MHC class II protein complex;0.0087639718659211!GO:0006891;intra-Golgi vesicle-mediated transport;0.00881258262365246!GO:0030660;Golgi-associated vesicle membrane;0.00883056295406901!GO:0030041;actin filament polymerization;0.00883056295406901!GO:0004177;aminopeptidase activity;0.00902759230933201!GO:0000139;Golgi membrane;0.0091797854173697!GO:0004721;phosphoprotein phosphatase activity;0.00931821665867853!GO:0004722;protein serine/threonine phosphatase activity;0.00955338224281034!GO:0031901;early endosome membrane;0.00958820723121701!GO:0046467;membrane lipid biosynthetic process;0.00994949657248912!GO:0019783;small conjugating protein-specific protease activity;0.00998096367305346!GO:0032318;regulation of Ras GTPase activity;0.0102494174323366!GO:0006607;NLS-bearing substrate import into nucleus;0.0102527407022443!GO:0008287;protein serine/threonine phosphatase complex;0.0103350149008271!GO:0000209;protein polyubiquitination;0.0103429274953142!GO:0032386;regulation of intracellular transport;0.0103431336913274!GO:0008629;induction of apoptosis by intracellular signals;0.0104442976824437!GO:0046474;glycerophospholipid biosynthetic process;0.0104799147046485!GO:0004860;protein kinase inhibitor activity;0.0105980378797729!GO:0030968;unfolded protein response;0.010643405484455!GO:0005815;microtubule organizing center;0.010830454447879!GO:0000118;histone deacetylase complex;0.0108749127116365!GO:0006354;RNA elongation;0.0111363636293037!GO:0008286;insulin receptor signaling pathway;0.0112482241846247!GO:0030258;lipid modification;0.0113226817741491!GO:0016049;cell growth;0.0114662040998191!GO:0003690;double-stranded DNA binding;0.0115488868695073!GO:0008017;microtubule binding;0.0116224057513357!GO:0006470;protein amino acid dephosphorylation;0.0117733453626647!GO:0004843;ubiquitin-specific protease activity;0.0120577349639307!GO:0007259;JAK-STAT cascade;0.0121652464533546!GO:0006414;translational elongation;0.0122944189499539!GO:0015630;microtubule cytoskeleton;0.0124275198545243!GO:0019210;kinase inhibitor activity;0.0124275198545243!GO:0022890;inorganic cation transmembrane transporter activity;0.0124693567295687!GO:0046966;thyroid hormone receptor binding;0.0125186016683371!GO:0004576;oligosaccharyl transferase activity;0.0127447654472766!GO:0031072;heat shock protein binding;0.0128635465710159!GO:0005905;coated pit;0.0128813927126333!GO:0006643;membrane lipid metabolic process;0.0128873936124227!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.0131035545904778!GO:0004812;aminoacyl-tRNA ligase activity;0.0131035545904778!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.0131035545904778!GO:0051049;regulation of transport;0.0131035545904778!GO:0001558;regulation of cell growth;0.0131441106632173!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0131441106632173!GO:0050870;positive regulation of T cell activation;0.0132165063381478!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0133001976487297!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0133001976487297!GO:0002521;leukocyte differentiation;0.0133694649928155!GO:0008250;oligosaccharyl transferase complex;0.0135548822589551!GO:0002440;production of molecular mediator of immune response;0.0136611100304585!GO:0043022;ribosome binding;0.0136611100304585!GO:0005684;U2-dependent spliceosome;0.0137554443735896!GO:0046578;regulation of Ras protein signal transduction;0.0139679533217843!GO:0005791;rough endoplasmic reticulum;0.014295989471384!GO:0040029;regulation of gene expression, epigenetic;0.0146232404163237!GO:0003746;translation elongation factor activity;0.0146893487912675!GO:0005048;signal sequence binding;0.0147057408936683!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.0149841683280669!GO:0002819;regulation of adaptive immune response;0.0149841683280669!GO:0051056;regulation of small GTPase mediated signal transduction;0.0150221127766065!GO:0046489;phosphoinositide biosynthetic process;0.0150998349838853!GO:0030119;AP-type membrane coat adaptor complex;0.0151939802910415!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0151939802910415!GO:0045047;protein targeting to ER;0.0151939802910415!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0152140723086635!GO:0019882;antigen processing and presentation;0.015560805467166!GO:0033367;protein localization in mast cell secretory granule;0.0156206803568569!GO:0033365;protein localization in organelle;0.0156206803568569!GO:0033371;T cell secretory granule organization and biogenesis;0.0156206803568569!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0156206803568569!GO:0033375;protease localization in T cell secretory granule;0.0156206803568569!GO:0042629;mast cell granule;0.0156206803568569!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0156206803568569!GO:0033364;mast cell secretory granule organization and biogenesis;0.0156206803568569!GO:0033380;granzyme B localization in T cell secretory granule;0.0156206803568569!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0156206803568569!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0156206803568569!GO:0033368;protease localization in mast cell secretory granule;0.0156206803568569!GO:0033366;protein localization in secretory granule;0.0156206803568569!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0156206803568569!GO:0033374;protein localization in T cell secretory granule;0.0156206803568569!GO:0032763;regulation of mast cell cytokine production;0.0156396090982844!GO:0032762;mast cell cytokine production;0.0156396090982844!GO:0045121;lipid raft;0.0157692385398918!GO:0030433;ER-associated protein catabolic process;0.0161736655426338!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0161736655426338!GO:0035035;histone acetyltransferase binding;0.0165441242268755!GO:0030217;T cell differentiation;0.0168076328192645!GO:0030521;androgen receptor signaling pathway;0.0168428159154494!GO:0000082;G1/S transition of mitotic cell cycle;0.0168595705815139!GO:0006740;NADPH regeneration;0.0168685471619165!GO:0006098;pentose-phosphate shunt;0.0168685471619165!GO:0004197;cysteine-type endopeptidase activity;0.0172244318152802!GO:0008270;zinc ion binding;0.0172765594924855!GO:0019883;antigen processing and presentation of endogenous antigen;0.0173177434369142!GO:0016859;cis-trans isomerase activity;0.0173816605596725!GO:0045576;mast cell activation;0.0174720680220479!GO:0001516;prostaglandin biosynthetic process;0.0175003219694405!GO:0046457;prostanoid biosynthetic process;0.0175003219694405!GO:0030127;COPII vesicle coat;0.0179991113767242!GO:0012507;ER to Golgi transport vesicle membrane;0.0179991113767242!GO:0016584;nucleosome positioning;0.0180346388507265!GO:0045646;regulation of erythrocyte differentiation;0.0183538122245714!GO:0006338;chromatin remodeling;0.0183538122245714!GO:0002467;germinal center formation;0.0185078668386236!GO:0043038;amino acid activation;0.0185305685220773!GO:0006418;tRNA aminoacylation for protein translation;0.0185305685220773!GO:0043039;tRNA aminoacylation;0.0185305685220773!GO:0031098;stress-activated protein kinase signaling pathway;0.0192915530207523!GO:0043299;leukocyte degranulation;0.019535731029506!GO:0043492;ATPase activity, coupled to movement of substances;0.0197129922907234!GO:0030522;intracellular receptor-mediated signaling pathway;0.0197129922907234!GO:0030218;erythrocyte differentiation;0.0198450134304047!GO:0019901;protein kinase binding;0.020059011758744!GO:0004221;ubiquitin thiolesterase activity;0.0201764218840783!GO:0008312;7S RNA binding;0.0203142857564744!GO:0030027;lamellipodium;0.0205791764557157!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0207898935581964!GO:0030133;transport vesicle;0.0209111995211445!GO:0030131;clathrin adaptor complex;0.0216310819772871!GO:0019220;regulation of phosphate metabolic process;0.0216310819772871!GO:0051174;regulation of phosphorus metabolic process;0.0216310819772871!GO:0043621;protein self-association;0.0216600641924649!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0216665198947306!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0217698805084641!GO:0051051;negative regulation of transport;0.0219742163214188!GO:0003725;double-stranded RNA binding;0.0222725399674075!GO:0008139;nuclear localization sequence binding;0.022445898734778!GO:0006367;transcription initiation from RNA polymerase II promoter;0.022445898734778!GO:0043304;regulation of mast cell degranulation;0.022445898734778!GO:0005762;mitochondrial large ribosomal subunit;0.022445898734778!GO:0000315;organellar large ribosomal subunit;0.022445898734778!GO:0003677;DNA binding;0.0228928915973133!GO:0005484;SNAP receptor activity;0.0229636954409362!GO:0050811;GABA receptor binding;0.0231219946059607!GO:0000165;MAPKKK cascade;0.023235215284123!GO:0008283;cell proliferation;0.0240157133486346!GO:0006458;'de novo' protein folding;0.0240989120271244!GO:0051084;'de novo' posttranslational protein folding;0.0240989120271244!GO:0008624;induction of apoptosis by extracellular signals;0.0241619991486351!GO:0045185;maintenance of protein localization;0.0246461862806328!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0249177897849471!GO:0015036;disulfide oxidoreductase activity;0.0249854164659764!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0250614823642461!GO:0030125;clathrin vesicle coat;0.0255441815887163!GO:0030665;clathrin coated vesicle membrane;0.0255441815887163!GO:0045792;negative regulation of cell size;0.0262503734497906!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.026311093596822!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.026311093596822!GO:0002237;response to molecule of bacterial origin;0.0264750599437501!GO:0015923;mannosidase activity;0.0270868214299841!GO:0006968;cellular defense response;0.0271707262004445!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0273986997121956!GO:0003711;transcription elongation regulator activity;0.0275207756326995!GO:0006405;RNA export from nucleus;0.0275913282071063!GO:0017166;vinculin binding;0.0283229561494532!GO:0006376;mRNA splice site selection;0.0283404531335173!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0283404531335173!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0283404531335173!GO:0050900;leukocyte migration;0.0284042518256317!GO:0051059;NF-kappaB binding;0.0284042518256317!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0285313864724524!GO:0045603;positive regulation of endothelial cell differentiation;0.0285929431524321!GO:0022403;cell cycle phase;0.0291347571284317!GO:0018196;peptidyl-asparagine modification;0.0292154842350985!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0292154842350985!GO:0005669;transcription factor TFIID complex;0.0294622000732413!GO:0006595;polyamine metabolic process;0.0294622000732413!GO:0051920;peroxiredoxin activity;0.0301023324115865!GO:0032507;maintenance of cellular protein localization;0.0301617070780099!GO:0002252;immune effector process;0.0302063227158017!GO:0030308;negative regulation of cell growth;0.030759761739599!GO:0019079;viral genome replication;0.0309964051118836!GO:0008538;proteasome activator activity;0.031016315366732!GO:0050871;positive regulation of B cell activation;0.0310646496915446!GO:0043407;negative regulation of MAP kinase activity;0.0310836092293025!GO:0042108;positive regulation of cytokine biosynthetic process;0.0314992778639852!GO:0016585;chromatin remodeling complex;0.031675287360216!GO:0008333;endosome to lysosome transport;0.0318181439041831!GO:0007006;mitochondrial membrane organization and biogenesis;0.0322728442499448!GO:0030134;ER to Golgi transport vesicle;0.032881146267036!GO:0022411;cellular component disassembly;0.0333077898522702!GO:0008154;actin polymerization and/or depolymerization;0.033475092710376!GO:0002218;activation of innate immune response;0.0337119321143127!GO:0002758;innate immune response-activating signal transduction;0.0337119321143127!GO:0019377;glycolipid catabolic process;0.0338433016603433!GO:0030503;regulation of cell redox homeostasis;0.0341503252268023!GO:0007254;JNK cascade;0.0342862089258254!GO:0005869;dynactin complex;0.0343613396696846!GO:0045947;negative regulation of translational initiation;0.0350756206440536!GO:0050865;regulation of cell activation;0.0356581735417139!GO:0044262;cellular carbohydrate metabolic process;0.0357601731460116!GO:0002443;leukocyte mediated immunity;0.0364086987158163!GO:0045113;regulation of integrin biosynthetic process;0.0365632757669419!GO:0045112;integrin biosynthetic process;0.0365632757669419!GO:0015980;energy derivation by oxidation of organic compounds;0.0372909074335225!GO:0019900;kinase binding;0.0374095521775218!GO:0006261;DNA-dependent DNA replication;0.0384162797416343!GO:0006914;autophagy;0.0387389466532184!GO:0007010;cytoskeleton organization and biogenesis;0.0387714547972463!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0387897691440787!GO:0007266;Rho protein signal transduction;0.0391917706685942!GO:0042113;B cell activation;0.0393690574120215!GO:0016605;PML body;0.0398167029548576!GO:0033549;MAP kinase phosphatase activity;0.0398167029548576!GO:0017017;MAP kinase tyrosine/serine/threonine phosphatase activity;0.0398167029548576!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.040020588262365!GO:0042992;negative regulation of transcription factor import into nucleus;0.0402111875222348!GO:0042308;negative regulation of protein import into nucleus;0.0402111875222348!GO:0030663;COPI coated vesicle membrane;0.0405694586173897!GO:0030126;COPI vesicle coat;0.0405694586173897!GO:0033239;negative regulation of amine metabolic process;0.0406612526604319!GO:0045763;negative regulation of amino acid metabolic process;0.0406612526604319!GO:0001933;negative regulation of protein amino acid phosphorylation;0.0406612526604319!GO:0006213;pyrimidine nucleoside metabolic process;0.0406612526604319!GO:0035258;steroid hormone receptor binding;0.040693292119169!GO:0006661;phosphatidylinositol biosynthetic process;0.0411828937315071!GO:0051249;regulation of lymphocyte activation;0.0413040115962866!GO:0002444;myeloid leukocyte mediated immunity;0.0416917115917213!GO:0030137;COPI-coated vesicle;0.0416917115917213!GO:0008180;signalosome;0.0419373211472765!GO:0016860;intramolecular oxidoreductase activity;0.0420101945213958!GO:0045746;negative regulation of Notch signaling pathway;0.0423812565997113!GO:0030098;lymphocyte differentiation;0.0431646181627286!GO:0051347;positive regulation of transferase activity;0.0431948699053882!GO:0004218;cathepsin S activity;0.0433053120835926!GO:0042101;T cell receptor complex;0.0440530196858373!GO:0043681;protein import into mitochondrion;0.0440530196858373!GO:0032760;positive regulation of tumor necrosis factor production;0.044494151006116!GO:0043506;regulation of JNK activity;0.0446497158328726!GO:0002718;regulation of cytokine production during immune response;0.0448140759386861!GO:0002367;cytokine production during immune response;0.0448140759386861!GO:0002700;regulation of production of molecular mediator of immune response;0.0448140759386861!GO:0045058;T cell selection;0.0450073820962136!GO:0043071;positive regulation of non-apoptotic programmed cell death;0.0450263610063562!GO:0050852;T cell receptor signaling pathway;0.0451197579190894!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0451197579190894!GO:0010257;NADH dehydrogenase complex assembly;0.0451197579190894!GO:0033108;mitochondrial respiratory chain complex assembly;0.0451197579190894!GO:0045926;negative regulation of growth;0.0451197579190894!GO:0051651;maintenance of cellular localization;0.0466762548359861!GO:0006509;membrane protein ectodomain proteolysis;0.0466762548359861!GO:0033619;membrane protein proteolysis;0.0466762548359861!GO:0048002;antigen processing and presentation of peptide antigen;0.0468373728413807!GO:0046456;icosanoid biosynthetic process;0.0482443680599775!GO:0000303;response to superoxide;0.0482449040223841!GO:0032984;macromolecular complex disassembly;0.0491055976296066
|sample_id=12243
|sample_note=Jan 20 librarian
|sample_sex=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=blood
|top_motifs=PAX2:3.44522018768;RUNX1..3:3.41687781226;NFKB1_REL_RELA:3.2417540173;NFE2:2.99845883895;BACH2:2.94629463348;ETS1,2:2.9455569393;EP300:2.94545591577;FOS_FOS{B,L1}_JUN{B,D}:2.93206229424;SPIB:2.85945190257;FOSL2:2.83971807959;ATF5_CREB3:2.70604743711;SPI1:2.66609899196;RFX2..5_RFXANK_RFXAP:2.5533244226;NFIL3:2.53420705595;ATF4:2.45165586764;JUN:2.44752018071;CREB1:2.39197936849;DMAP1_NCOR{1,2}_SMARC:2.10972229173;RORA:2.06773564834;CEBPA,B_DDIT3:2.04204336283;ELF1,2,4:2.03408722256;FOXO1,3,4:2.01382443153;HIF1A:1.95022702924;TGIF1:1.92760688353;NANOG{mouse}:1.91901311108;HLF:1.91012506586;FOX{D1,D2}:1.72103601365;PAX3,7:1.69379910742;NFE2L2:1.6819226476;SREBF1,2:1.66056677692;PPARG:1.5655574162;MAFB:1.54406984262;RFX1:1.53970626753;HMX1:1.51516811653;IRF1,2:1.46982012614;FOX{F1,F2,J1}:1.44262985731;BPTF:1.36413900231;FOXN1:1.25666283645;NKX2-1,4:1.2401541839;RXRA_VDR{dimer}:1.22220092304;GLI1..3:1.14566223585;ATF2:1.12917676442;HBP1_HMGB_SSRP1_UBTF:1.08851603278;ATF6:1.07223009036;NFE2L1:0.970320793372;HMGA1,2:0.95690023865;FOXP3:0.916071413329;SMAD1..7,9:0.911318020487;IRF7:0.859896340581;T:0.796195328378;RBPJ:0.744810026075;NANOG:0.666612884252;STAT2,4,6:0.648127078588;TBX4,5:0.601273256298;POU5F1:0.552835538765;NFATC1..3:0.542670130759;XBP1:0.521144850629;AHR_ARNT_ARNT2:0.513157053913;MEF2{A,B,C,D}:0.46908732882;HES1:0.463841471377;TFCP2:0.315013424125;BREu{core}:0.306419119904;TLX2:0.246034079395;FOXL1:0.217936762583;EGR1..3:0.210859472245;TBP:0.203815911052;SRF:0.163292119966;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.143240724197;TFAP2{A,C}:0.137968997582;ZNF238:0.0723150969423;ESRRA:0.0532491413686;ALX4:0.0453241615231;SOX2:0.0192243557979;PAX8:0.0170526651422;MZF1:-0.0249825701624;HSF1,2:-0.0273878343168;POU2F1..3:-0.0300490367126;NR1H4:-0.0754097813682;TFAP4:-0.100307490964;MYFfamily:-0.159862315593;TFAP2B:-0.191850963285;MTE{core}:-0.201978823159;NHLH1,2:-0.204630996288;PATZ1:-0.224797538419;HOX{A5,B5}:-0.231457247304;EN1,2:-0.23270433534;ZNF148:-0.249557385167;ESR1:-0.260710650292;MED-1{core}:-0.265981076264;STAT5{A,B}:-0.309252147898;TAL1_TCF{3,4,12}:-0.342696282252;DBP:-0.346575312985;HOXA9_MEIS1:-0.351152426894;SP1:-0.354157959247;TFDP1:-0.392949859761;MYB:-0.397986007142;GCM1,2:-0.422696800695;MTF1:-0.480965788863;EBF1:-0.497617913821;SOX5:-0.503299906335;RXR{A,B,G}:-0.517559820608;GATA6:-0.518099517738;MAZ:-0.557607773895;PRRX1,2:-0.563635657696;FOX{I1,J2}:-0.567567182708;PAX5:-0.568909954774;NR6A1:-0.570892029838;REST:-0.60262522183;NFY{A,B,C}:-0.605444582806;ZNF384:-0.615910440094;FOXP1:-0.619521208153;OCT4_SOX2{dimer}:-0.681359171933;ZNF423:-0.688969885714;LEF1_TCF7_TCF7L1,2:-0.71158619591;ZFP161:-0.719107523273;GATA4:-0.719749742541;HIC1:-0.730027332964;CDX1,2,4:-0.739475350832;VSX1,2:-0.761738277409;SPZ1:-0.767770403238;FOXD3:-0.798735469794;NR5A1,2:-0.801323839906;ZEB1:-0.806575644695;NKX3-1:-0.821394707126;HNF4A_NR2F1,2:-0.846191200785;NKX6-1,2:-0.868482873255;HOX{A6,A7,B6,B7}:-0.874901299454;AIRE:-0.897188371424;XCPE1{core}:-0.89761863328;SOX{8,9,10}:-0.915498713108;PAX4:-0.922095276061;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.923560337483;E2F1..5:-0.934269024389;RREB1:-0.934663193675;PRDM1:-0.952910101535;HNF1A:-0.956875256037;STAT1,3:-0.975853459938;MYBL2:-0.977823419037;PAX6:-0.985443776537;PITX1..3:-0.985545149343;IKZF1:-0.997754821152;FOXA2:-1.05836681654;TP53:-1.06607428267;SNAI1..3:-1.10620735442;NKX2-3_NKX2-5:-1.11473946264;GTF2A1,2:-1.13489176034;MYOD1:-1.15725108786;PDX1:-1.15978367462;GTF2I:-1.1877007929;PAX1,9:-1.21394877858;ZIC1..3:-1.2400806995;PBX1:-1.27483681534;ELK1,4_GABP{A,B1}:-1.29779011524;ADNP_IRX_SIX_ZHX:-1.30762809684;TLX1..3_NFIC{dimer}:-1.31498220004;ZBTB16:-1.32802958202;FOXQ1:-1.33467667413;TEAD1:-1.38942386289;CUX2:-1.41434859406;IKZF2:-1.44979891645;CRX:-1.45451396609;ALX1:-1.46087373256;NR3C1:-1.46146784266;ZBTB6:-1.46207914506;LMO2:-1.47034263518;NFIX:-1.47658790673;GFI1B:-1.57084576137;FOXM1:-1.60619178324;bHLH_family:-1.60754533193;GZF1:-1.63757312447;GFI1:-1.69053739604;LHX3,4:-1.70083410736;NKX2-2,8:-1.76445070592;ARID5B:-1.83203373451;POU6F1:-1.85391286905;TOPORS:-1.86179313501;NRF1:-1.90116344149;POU1F1:-1.94181673224;AR:-2.00158248997;KLF4:-2.05097703152;CDC5L:-2.21516943082;TEF:-2.27651615142;UFEwm:-2.31102706629;SOX17:-2.32432747993;ZNF143:-2.39546765672;NKX3-2:-2.39932545758;YY1:-2.40179393462;HOX{A4,D4}:-2.40938841389;HAND1,2:-2.48683334839;EVI1:-2.49820750619;POU3F1..4:-2.88689333218;ONECUT1,2:-3.10425639432
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12243-129H2;search_select_hide=table117:FF:12243-129H2
}}
}}

Latest revision as of 18:36, 4 June 2020

Name:Basophils, donor3
Species:Human (Homo sapiens)
Library ID:CNhs12575
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stageNA
sexNA
ageNA
cell typebasophil
cell lineNA
company3HBiomedical
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog number3H100-93-5
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005610
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12575 CAGE DRX008118 DRR008990
Accession ID Hg19

Library idBAMCTSS
CNhs12575 DRZ000415 DRZ001800
Accession ID Hg38

Library idBAMCTSS
CNhs12575 DRZ011765 DRZ013150
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0.166
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0.0625
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.179
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0.0625
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.295
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.117
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0.379
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40.0625
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.104
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0.285
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.137
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0.56
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40.166
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0.249
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0.117
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.578
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.421
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0.117
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0.117
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.31
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.456
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40.117
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0.35
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.129
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0.629
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0.166
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0.688
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190.267
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.182
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0.117
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140.117
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0.117
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.35
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.733
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.521
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.694
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.685
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.622
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40.521
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.456
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0.166
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.166
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0.0866
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.826
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.492
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.644
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.0625
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340.659
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.727
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.0625
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.377
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.681
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0.35
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0.117
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0.0625
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.574
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0.406
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0.209
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0.0625
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0.501
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340.249
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340.91
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0.35
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0.166
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12575

Jaspar motifP-value
MA0002.21.04594e-13
MA0003.10.183
MA0004.10.376
MA0006.10.564
MA0007.10.644
MA0009.10.291
MA0014.10.809
MA0017.10.359
MA0018.21.29157e-4
MA0019.10.983
MA0024.10.0187
MA0025.11.49032e-5
MA0027.10.879
MA0028.10.0952
MA0029.10.39
MA0030.10.0469
MA0031.10.0698
MA0035.20.59
MA0038.10.814
MA0039.20.605
MA0040.10.143
MA0041.10.274
MA0042.10.249
MA0043.12.60682e-11
MA0046.10.0657
MA0047.20.355
MA0048.10.662
MA0050.18.27689e-6
MA0051.10.01
MA0052.11.31634e-4
MA0055.10.39
MA0057.10.236
MA0058.10.185
MA0059.10.741
MA0060.10.00113
MA0061.11.83643e-20
MA0062.20.00389
MA0065.20.0872
MA0066.10.019
MA0067.14.18416e-8
MA0068.10.0194
MA0069.10.654
MA0070.10.0376
MA0071.10.412
MA0072.10.399
MA0073.10.0523
MA0074.10.284
MA0076.10.265
MA0077.10.167
MA0078.10.679
MA0079.20.829
MA0080.29.28751e-15
MA0081.11.35983e-4
MA0083.10.793
MA0084.10.827
MA0087.10.891
MA0088.10.0548
MA0090.10.109
MA0091.10.996
MA0092.10.48
MA0093.10.453
MA0099.25.15742e-45
MA0100.10.621
MA0101.18.41152e-18
MA0102.22.17319e-10
MA0103.10.0397
MA0104.20.521
MA0105.11.14433e-16
MA0106.10.129
MA0107.17.23613e-22
MA0108.20.804
MA0111.10.953
MA0112.20.00257
MA0113.10.602
MA0114.10.807
MA0115.10.0992
MA0116.10.0028
MA0117.10.00985
MA0119.10.946
MA0122.10.939
MA0124.10.721
MA0125.10.199
MA0131.10.679
MA0135.10.334
MA0136.14.37326e-18
MA0137.20.722
MA0138.20.241
MA0139.10.304
MA0140.10.346
MA0141.10.395
MA0142.10.973
MA0143.10.714
MA0144.10.209
MA0145.10.416
MA0146.10.252
MA0147.10.789
MA0148.10.437
MA0149.10.882
MA0150.13.01374e-18
MA0152.10.134
MA0153.10.00584
MA0154.16.25726e-4
MA0155.10.683
MA0156.18.50767e-15
MA0157.10.0966
MA0159.10.231
MA0160.10.0552
MA0162.10.861
MA0163.14.90465e-4
MA0164.10.863
MA0258.10.0788
MA0259.10.678



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12575

Novel motifP-value
10.564
100.0699
1000.432
1010.87
1020.926
1030.588
1040.431
1050.0332
1062.34147e-4
1070.434
1080.672
1090.4
110.534
1100.551
1110.287
1120.592
1130.0907
1140.23
1150.149
1160.49
1170.101
1180.324
1190.949
120.171
1200.564
1210.263
1220.217
1230.262
1240.863
1250.605
1260.191
1270.417
1280.0518
1290.76
130.254
1300.414
1310.719
1320.0116
1330.38
1340.863
1350.4
1360.9
1370.0031
1380.288
1390.153
140.318
1400.235
1410.771
1420.118
1430.00639
1440.773
1450.76
1460.839
1470.291
1480.0734
1490.69
150.214
1500.585
1510.143
1520.0721
1530.652
1540.476
1550.455
1560.698
1570.857
1580.0602
1590.129
160.844
1600.921
1610.942
1620.0708
1630.327
1640.216
1650.289
1660.592
1670.61
1680.142
1690.0449
170.405
180.281
190.874
20.681
200.519
210.828
220.247
230.142
240.597
250.266
260.219
270.794
280.523
290.207
30.415
300.524
310.776
320.172
330.452
340.563
350.297
360.177
370.237
380.69
390.995
40.886
400.219
410.00179
420.522
430.0382
440.559
450.642
460.431
470.849
480.945
490.134
50.245
500.847
510.422
520.408
530.418
540.46
550.663
560.963
570.736
580.205
590.269
60.797
600.0833
610.484
620.131
630.937
640.596
650.433
660.138
670.626
680.248
690.471
70.232
700.205
710.098
720.259
730.151
740.28
750.286
760.412
770.963
780.638
790.643
80.727
800.013
810.599
820.55
830.102
840.455
850.0526
860.0435
870.298
880.726
890.999
90.265
900.421
910.303
920.546
930.293
940.095
950.281
960.737
970.849
980.332
999.363e-4



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12575


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000081 (blood cell)
0000219 (motile cell)
0000738 (leukocyte)
0000255 (eukaryotic cell)
0000094 (granulocyte)
0000767 (basophil)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000013 (human basophil sample)
0000212 (human basophil heparinase treated sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)

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