FF:716-20H2: Difference between revisions

Latest revision as of 19:19, 4 June 2020

Name:	liver, neonate N07
Species:	Mouse (Mus musculus)
Library ID:	CNhs11103
Sample type:	developmental
Genomic View:	UCSC
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	C57BL/6J
tissue	liver
dev stage	7 days neonate
sex	mixture
age	NA
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	NA
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	NA
extraction protocol (Details)	NA

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005798

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs11103		CAGE		DRX009025		DRR009899

Accession ID Mm9

Library id		BAM		CTSS
CNhs11103		DRZ001324		DRZ002707

Accession ID Mm10

Library id		BAM		CTSS
CNhs11103		DRZ012674		DRZ014057

Download raw sequence, BAM & CTSS

Mm9

Fasta	BAM	CTSS
download	download	donwload

Mm10

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

CNhs11103

0	0
1	0
10	0
100	0
1000	0
1001	0.175
1002	-0.0612
1003	-0.0892
1004	0
1005	0.203
1006	0.00427
1007	0.00843
1008	0
1009	0.022
101	-0.0174
1010	0
1011	-0.16
1012	0.137
1013	0.334
1014	0.122
1015	-0.263
1016	-0.223
1017	0
1018	0
1019	0
102	0
1020	0
1021	0
1022	0.393
1023	0
1024	0.137
1025	0.638
1026	0
1027	0
1028	0
1029	-0.0818
103	0
1030	0
1031	-0.00421
1032	-0.232
1033	0
1034	0.51
1035	0
1036	-0.054
1037	0
1038	-0.0389
1039	0.446
104	0
1040	-0.0865
1041	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11103

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0402
MA0003.1	MA0003.1	0.248
MA0004.1	MA0004.1	0.95
MA0006.1	MA0006.1	0.152
MA0007.1	MA0007.1	0.637
MA0009.1	MA0009.1	0.497
MA0014.1	MA0014.1	0.539
MA0017.1	MA0017.1	1.85065e-19
MA0018.2	MA0018.2	1.65906e-6
MA0019.1	MA0019.1	0.2
MA0024.1	MA0024.1	0.168
MA0025.1	MA0025.1	0.344
MA0027.1	MA0027.1	0.889
MA0028.1	MA0028.1	0.355
MA0029.1	MA0029.1	0.149
MA0030.1	MA0030.1	0.0024
MA0031.1	MA0031.1	0.0102
MA0035.2	MA0035.2	0.0192
MA0038.1	MA0038.1	0.737
MA0039.2	MA0039.2	0.378
MA0040.1	MA0040.1	0.145
MA0041.1	MA0041.1	0.504
MA0042.1	MA0042.1	0.823
MA0043.1	MA0043.1	0.0406
MA0046.1	MA0046.1	5.18929e-75
MA0047.2	MA0047.2	2.76294e-9
MA0048.1	MA0048.1	0.366
MA0050.1	MA0050.1	2.86326e-6
MA0051.1	MA0051.1	3.17172e-5
MA0052.1	MA0052.1	0.0166
MA0055.1	MA0055.1	0.821
MA0057.1	MA0057.1	0.84
MA0058.1	MA0058.1	0.832
MA0059.1	MA0059.1	0.483
MA0060.1	MA0060.1	0.00728
MA0061.1	MA0061.1	0.182
MA0062.2	MA0062.2	0.166
MA0065.2	MA0065.2	2.87921e-13
MA0066.1	MA0066.1	0.0252
MA0067.1	MA0067.1	0.0694
MA0068.1	MA0068.1	0.606
MA0069.1	MA0069.1	0.287
MA0070.1	MA0070.1	0.419
MA0071.1	MA0071.1	9.17655e-4
MA0072.1	MA0072.1	0.00247
MA0073.1	MA0073.1	0.757
MA0074.1	MA0074.1	0.284
MA0076.1	MA0076.1	0.109
MA0077.1	MA0077.1	0.0211
MA0078.1	MA0078.1	0.46
MA0079.2	MA0079.2	0.5
MA0080.2	MA0080.2	0.013
MA0081.1	MA0081.1	0.73
MA0083.1	MA0083.1	0.135
MA0084.1	MA0084.1	0.432
MA0087.1	MA0087.1	0.106
MA0088.1	MA0088.1	0.664
MA0090.1	MA0090.1	0.703
MA0091.1	MA0091.1	0.916
MA0092.1	MA0092.1	0.0518
MA0093.1	MA0093.1	0.962
MA0099.2	MA0099.2	0.383
MA0100.1	MA0100.1	0.345
MA0101.1	MA0101.1	0.663
MA0102.2	MA0102.2	0.183
MA0103.1	MA0103.1	0.403
MA0104.2	MA0104.2	0.461
MA0105.1	MA0105.1	0.0082
MA0106.1	MA0106.1	0.0706
MA0107.1	MA0107.1	0.626
MA0108.2	MA0108.2	0.0166
MA0111.1	MA0111.1	0.876
MA0112.2	MA0112.2	1.48684e-5
MA0113.1	MA0113.1	0.497
MA0114.1	MA0114.1	6.06614e-19
MA0115.1	MA0115.1	4.02358e-11
MA0116.1	MA0116.1	0.0302
MA0117.1	MA0117.1	0.808
MA0119.1	MA0119.1	0.00177
MA0122.1	MA0122.1	0.507
MA0124.1	MA0124.1	0.661
MA0125.1	MA0125.1	0.71
MA0131.1	MA0131.1	0.693
MA0135.1	MA0135.1	0.703
MA0136.1	MA0136.1	0.736
MA0137.2	MA0137.2	0.372
MA0138.2	MA0138.2	0.815
MA0139.1	MA0139.1	0.107
MA0140.1	MA0140.1	0.00424
MA0141.1	MA0141.1	3.99008e-4
MA0142.1	MA0142.1	0.199
MA0143.1	MA0143.1	0.11
MA0144.1	MA0144.1	0.376
MA0145.1	MA0145.1	0.116
MA0146.1	MA0146.1	0.132
MA0147.1	MA0147.1	0.518
MA0148.1	MA0148.1	4.96153e-13
MA0149.1	MA0149.1	0.162
MA0150.1	MA0150.1	0.114
MA0152.1	MA0152.1	0.413
MA0153.1	MA0153.1	8.05743e-50
MA0154.1	MA0154.1	0.019
MA0155.1	MA0155.1	0.306
MA0156.1	MA0156.1	0.779
MA0157.1	MA0157.1	0.00349
MA0159.1	MA0159.1	0.00252
MA0160.1	MA0160.1	0.00175
MA0162.1	MA0162.1	0.446
MA0163.1	MA0163.1	9.34499e-5
MA0164.1	MA0164.1	0.916
MA0258.1	MA0258.1	0.0116
MA0259.1	MA0259.1	0.329

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11103

Novel motif	Logo	P-value
1	1	0.185
10	10	0.226
100	100	0.759
101	101	0.899
102	102	0.0879
103	103	0.00696
104	104	0.479
105	105	0.932
106	106	0.0118
107	107	0.0158
108	108	0.71
109	109	0.0682
11	11	0.142
110	110	0.0816
111	111	0.152
112	112	0.00663
113	113	0.894
114	114	0.0678
115	115	0.455
116	116	0.911
117	117	0.125
118	118	0.186
119	119	0.148
12	12	0.55
120	120	0.604
121	121	0.456
122	122	0.818
123	123	0.23
124	124	0.133
125	125	0.455
126	126	0.227
127	127	0.83
128	128	0.0104
129	129	0.712
13	13	2.32836e-4
130	130	0.287
131	131	0.0486
132	132	0.604
133	133	0.369
134	134	0.873
135	135	0.363
136	136	0.433
137	137	0.451
138	138	0.354
139	139	0.97
14	14	0.475
140	140	0.0784
141	141	0.662
142	142	0.182
143	143	0.63
144	144	0.947
145	145	0.0298
146	146	0.23
147	147	0.479
148	148	0.771
149	149	0.314
15	15	0.137
150	150	0.141
151	151	0.467
152	152	0.113
153	153	0.127
154	154	0.691
155	155	0.537
156	156	0.201
157	157	0.426
158	158	0.215
159	159	0.391
160	160	0.0617
161	161	0.964
162	162	0.411
163	163	0.983
164	164	0.0733
165	165	0.548
166	166	0.264
167	167	0.456
168	168	0.591
169	169	0.00171
17	17	0.08
18	18	0.893
19	19	0.0201
2	2	0.425
20	20	0.714
21	21	0.47
22	22	0.106
23	23	0.202
24	24	0.261
25	25	0.996
26	26	8.62157e-4
27	27	0.504
28	28	0.511
29	29	0.42
3	3	0.0313
30	30	0.656
31	31	0.334
32	32	0.0493
33	33	0.176
34	34	0.699
35	35	0.914
36	36	0.0575
37	37	0.0877
38	38	0.322
39	39	0.241
4	4	0.681
40	40	0.132
41	41	0.612
42	42	0.177
43	43	0.056
44	44	0.143
45	45	0.589
46	46	0.0974
47	47	0.369
48	48	0.215
49	49	0.0686
5	5	0.101
50	50	0.406
51	51	0.251
52	52	0.125
53	53	0.917
54	54	0.386
55	55	0.517
56	56	0.354
57	57	0.989
58	58	0.364
59	59	0.0628
6	6	0.956
60	60	0.0764
61	61	0.221
62	62	0.164
63	63	0.0778
64	64	0.526
65	65	0.23
66	66	0.659
67	67	0.994
68	68	0.222
69	69	0.657
7	7	0.157
70	70	0.2
71	71	0.0634
72	72	0.633
73	73	0.187
74	74	0.396
75	75	0.0758
76	76	0.748
77	77	0.305
78	78	0.0172
79	79	0.89
8	8	0.0331
80	80	0.148
81	81	0.717
82	82	0.0884
83	83	0.721
84	84	0.862
85	85	0.0594
86	86	0.204
87	87	0.286
88	88	0.895
89	89	0.046
9	9	0.475
90	90	0.309
91	91	0.2
92	92	0.237
93	93	0.452
94	94	0.803
95	95	0.274
96	96	0.227
97	97	0.826
98	98	0.244
99	99	0.0424

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11103

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0011409 mouse liver- neonate N07 sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

UBERON: Anatomy
0000468 (multi-cellular organism)
0002107 (liver)
0002100 (trunk)
0000479 (tissue)
0001007 (digestive system)
0004119 (endoderm-derived structure)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009569 (subdivision of trunk)
0002368 (endocrine gland)
0005177 (trunk region element)
0002365 (exocrine gland)
0005172 (abdomen element)
0006925 (digestive gland)
0002530 (gland)
0010317 (germ layer / neural crest derived structure)
0005173 (abdominal segment element)
0002417 (abdominal segment of trunk)
0000949 (endocrine system)
0002330 (exocrine system)
0000916 (abdomen)
0002423 (hepatobiliary system)

FF: FANTOM5
0000102 (sample by type)
0000101 (sample by species)
0000103 (mouse sample)
0000001 (sample)
0000004 (tissue sample)
0000303 (neonate sample - mouse)
0000313 (mouse neonate N7 sample)
0011409 (mouse liver- neonate N07 sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0001041 (foregut)
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0003104 (mesenchyme)
UBERON:0004161 (septum transversum)
UBERON:0009497 (epithelium of foregut-midgut junction)
UBERON:0010316 (germ layer / neural crest)
FF:0000294 (mouse embryonic day 11 sample)

@@ Line 1: / Line 1: @@
 {{f5samples
-|DRA_sample_Accession=CAGE@DRS008888
+|DRA_sample_Accession=CAGE@SAMD00005798
-|accession_numbers=CAGE;DRX009025;DRR009899;DRZ001324;DRZ002707
+|accession_numbers=CAGE;DRX009025;DRR009899;DRZ001324;DRZ002707;DRZ012674;DRZ014057
 |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002107,UBERON:0002100,UBERON:0000479,UBERON:0001007,UBERON:0004119,UBERON:0000062,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0009569,UBERON:0002368,UBERON:0005177,UBERON:0002365,UBERON:0005172,UBERON:0006925,UBERON:0002530,UBERON:0010317,UBERON:0005173,UBERON:0002417,UBERON:0000949,UBERON:0002330,UBERON:0000916,UBERON:0002423
 |ancestors_in_cell_lineage_facet=
@@ Line 9: / Line 9: @@
 |created_by=
 |creation_date=
-|data_phase=1
+|data_phase=2
-|datafreeze_phase=1
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr10:80555320..80555378,-!p1@Creb3l3!2.20!183.47!Creb3l3;;chr1:173144144..173144176,+!p1@Nr1i3!2.13!132.85!Nr1i3;;chr1:173144100..173144138,+!p2@Nr1i3!1.90!77.78!Nr1i3;;chr2:163372884..163372904,+!p1@Hnf4a!1.88!75.17!Hnf4a;;chr10:88969376..88969395,-!p1@Nr1h4!1.87!72.57!Nr1h4;;chr7:19608891..19608895,-!p1@Foxa3!1.84!87.83!Foxa3;;chr16:38294860..38294924,-!p1@Nr1i2!1.84!68.85!Nr1i2;;chr5:135582751..135582788,+!p1@Mlxipl!1.72!198.72!Mlxipl;;chr11:90249521..90249551,-!p3@Hlf!1.69!47.63!Hlf;;chr10:88996295..88996335,-!p3@Nr1h4!1.64!50.98!Nr1h4;;chr15:85566184..85566238,+!p1@Ppara!1.63!61.03!Ppara;;chr9:74709695..74709722,+!p1@Onecut1!1.63!42.05!Onecut1;;chr10:88996336..88996380,-!p2@Nr1h4!1.61!48.75!Nr1h4;;chr4:133109285..133109308,+!p1@Nr0b2!1.56!35.73!Nr0b2;;chr2:173044380..173044432,-!p1@Zbp1!1.49!69.22!Zbp1;;chr15:85566537..85566552,+!p2@Ppara!1.49!30.14!Ppara;;chr15:85602655..85602680,+!p5@Ppara!1.47!28.65!Ppara;;chr10:88145766..88145770,-!p1@Spic!1.42!32.75!Spic;;chr18:64499674..64499696,+!p1@Onecut2!1.31!33.49!Onecut2;;chr18:64499706..64499721,+!p2@Onecut2!1.28!25.31!Onecut2;;chr2:77357622..77357704,-!p1@Zfp385b!1.27!46.52!Zfp385b;;chr10:22539932..22539956,-!p1@Tcf21!1.25!44.28!Tcf21;;chr14:63864056..63864102,-!p1@Gata4!1.22!26.79!Gata4;;chr6:90415250..90415271,+!p4@Klf15!1.22!15.63!Klf15;;chr2:91034924..91034946,-!p2@Nr1h3!1.21!18.61!Nr1h3;;chr1:191993385..191993405,-!p3@Prox1!1.20!14.89!Prox1;;chr7:52071956..52071978,-!p1@Atf5!1.18!447.69!Atf5;;chr13:31650185..31650201,+!p1@Foxq1!1.18!49.49!Foxq1;;chr11:121380640..121380655,-!p1@Zfp750!1.18!23.44!Zfp750;;chr2:173044357..173044377,-!p2@Zbp1!1.17!19.72!Zbp1;;chr15:103164702..103164778,-!p3@Zfp385a!1.14!15.26!Zfp385a;;chr2:163372869..163372882,+!p3@Hnf4a!1.14!12.65!Hnf4a;;chr15:85566241..85566253,+!p6@Ppara!1.14!12.65!Ppara;;chr5:115421065..115421088,-!p1@Hnf1a!1.12!12.28!Hnf1a;;chr8:87425854..87425891,+!p1@Klf1!1.12!12.28!Klf1;;chr15:103085660..103085681,-!p1@Nfe2!1.09!17.12!Nfe2;;chr19:37509324..37509337,+!p1@Hhex!1.07!76.29!Hhex;;chr1:138857048..138857071,-!p2@Nr5a2!1.07!10.79!Nr5a2;;chr11:100683839..100683890,-!p2@Stat5b!1.06!24.56!Stat5b;;chr10:80555398..80555409,-!p2@Creb3l3!1.04!10.05!Creb3l3;;chr2:147872790..147872821,-!p2@Foxa2!1.04!10.05!Foxa2;;chr7:122989594..122989626,-!p1@Sox6!1.03!9.68!Sox6;;chr1:138857076..138857105,-!p1@Nr5a2!1.01!9.30!Nr5a2;;chr4:32334732..32334739,+!p7@Bach2!1.01!9.30!Bach2;;chr9:24578720..24578735,-!p1@Tbx20!1.00!8.93!Tbx20;;chr10:80555299..80555306,-!p3@Creb3l3!1.00!8.93!Creb3l3;;chr3:94176733..94176794,+!p1@Rorc!0.99!68.85!Rorc;;chr8:123608252..123608268,+!p1@Foxf1a!0.99!13.02!Foxf1a;;chr2:28477452..28477483,-!p1@Gfi1b!0.98!10.79!Gfi1b;;chr14:100683884..100683908,-!p4@Klf12!0.97!16.00!Klf12;;chr9:96159147..96159204,+!p2@Tfdp2!0.97!16.00!Tfdp2;;chr8:59799772..59799789,+!p1@Hand2!0.96!24.19!Hand2;;chr11:121380611..121380625,-!p3@Zfp750!0.96!10.05!Zfp750;;chr6:90415281..90415295,+!p5@Klf15!0.96!8.19!Klf15;;chr7:35904304..35904320,+!p1@Cebpa!0.95!168.21!Cebpa;;chr7:52072324..52072336,-!p4@Atf5!0.95!7.81!Atf5;;chr16:38294929..38294940,-!p2@Nr1i2!0.95!7.81!Nr1i2;;chr11:83664365..83664383,+!p1@Hnf1b!0.95!7.81!Hnf1b;;chr2:91035254..91035271,-!p3@Nr1h3!0.94!9.68!Nr1h3;;chr11:60036258..60036276,-!p3@Srebf1!0.92!13.02!Srebf1;;chr2:148506935..148506954,+!p2@Gzf1!0.91!14.51!Gzf1;;chr11:85699862..85699920,+!p1@Tbx4!0.91!7.07!Tbx4;;chr10:5734677..5734702,-!p4@Esr1!0.91!7.07!Esr1;;chr9:69137716..69137744,+!p1@Rora!0.90!46.15!Rora;;chr2:90936947..90936977,+!p2@Sfpi1!0.90!14.14!Sfpi1;;chr11:121380594..121380609,-!p2@Zfp750!0.90!12.28!Zfp750;;chr15:85566051..85566080,+!p4@Ppara!0.90!8.19!Ppara;;chr1:52176315..52176343,+!p1@Stat1!0.86!96.38!Stat1;;chr1:138857112..138857130,-!p7@Nr5a2!0.86!6.33!Nr5a2;;chr3:102768047..102768060,-!p1@Nr1h5!0.86!6.33!Nr1h5;;chr1:191994550..191994623,-!p1@Prox1!0.84!43.54!Prox1;;chr17:87153519..87153533,+!p5@Epas1!0.84!8.93!Epas1;;chr15:85602581..85602598,+!p8@Ppara!0.84!5.95!Ppara;;chr2:147871627..147871641,-!p1@Foxa2!0.84!5.95!Foxa2;;chrX:7544943..7545001,-!p1@Gata1!0.84!5.95!Gata1;;chr7:122989632..122989668,-!p2@Sox6!0.84!5.95!Sox6;;chr10:80555285..80555291,-!p4@Creb3l3!0.84!5.95!Creb3l3;;chr17:87153505..87153516,+!p6@Epas1!0.83!8.19!Epas1;;chr7:148452314..148452329,-!p1@Irf7!0.80!40.19!Irf7;;chr5:65213356..65213412,+!p6@Klf3!0.79!11.54!Klf3;;chr12:58646974..58647003,-!p1@Foxa1!0.79!7.07!Foxa1;;chr15:103082088..103082136,-!p2@Nfe2!0.79!5.21!Nfe2;;chr11:60023912..60023930,-!p1@Srebf1!0.78!133.97!Srebf1;;chr2:38206580..38206600,+!p2@Lhx2!0.78!6.33!Lhx2;;chr10:82226649..82226694,-!p2@Nfyb!0.77!34.24!Nfyb;;chr2:90936901..90936945,+!p1@Sfpi1!0.77!27.91!Sfpi1;;chr2:27532479..27532509,+!p3@Rxra!0.77!10.79!Rxra;;chr10:5734525..5734569,-!p3@Esr1!0.77!8.56!Esr1;;chr10:88996274..88996286,-!p4@Nr1h4!0.77!4.84!Nr1h4;;chr14:76887526..76887555,+!p10@Tsc22d1!0.77!4.84!Tsc22d1;;chr15:85565338..85565355,+!p7@Ppara!0.77!4.84!Ppara;;chr4:114732112..114732158,+!p1@Tal1!0.75!10.79!Tal1;;chr2:160698288..160698358,-!p3@Zhx3!0.74!15.26!Zhx3;;chr6:29476690..29476724,+!p1@Irf5!0.72!21.96!Irf5;;chr2:90922554..90922575,+!p4@Sfpi1!0.72!8.19!Sfpi1;;chr2:38206744..38206766,+!p1@Lhx2!0.72!5.21!Lhx2;;chr14:32979290..32979309,+!p3@Gm6768,p3@Ncoa4!0.72!5.21!Ncoa4;;chr8:87643578..87643593,-!p1@Zfp791!0.71!9.30!Zfp791;;chr9:74714281..74714296,+!p5@Onecut1!0.71!4.09!Onecut1;;chr12:36219283..36219298,-!p2@Ahr!0.71!4.09!Ahr;;chr1:169548377..169548430,+!p1@Rxrg!0.71!4.09!Rxrg;;chr17:87153240..87153254,+!p1@Epas1!0.70!89.69!Epas1;;chr1:170362437..170362478,-!p5@Pbx1!0.70!13.77!Pbx1;;chr11:16908650..16908690,-!p1@Plek!0.69!26.79!Plek;;chr6:115310872..115310899,+!p2@Pparg!0.68!7.07!Pparg;;chr6:15135639..15135655,+!p9@Foxp2!0.68!4.84!Foxp2;;chr1:13364477..13364492,-!p6@Ncoa2!0.68!4.84!Ncoa2;;chr2:27532513..27532525,+!p8@Rxra!0.68!4.47!Rxra;;chr6:16848395..16848416,-!p2@Tfec!0.68!4.47!Tfec;;chr10:5734660..5734670,-!p7@Esr1!0.67!3.72!Esr1;;chr11:96976641..96976646,-!p1@Tbx21!0.67!3.72!Tbx21;;chr12:36219645..36219730,-!p1@Ahr!0.66!40.94!Ahr;;chr1:138845748..138845766,-!p4@Nr5a2!0.66!4.84!Nr5a2;;chr8:79426176..79426275,+!p1@Nr3c2!0.65!20.10!Nr3c2;;chr2:133377954..133377973,+!p1@Bmp2!0.65!12.65!Bmp2;;chr11:90250944..90250982,-!p2@Hlf!0.65!6.33!Hlf;;chr15:103085802..103085817,-!p4@Nfe2!0.65!4.47!Nfe2;;chr5:138187583..138187602,+!p6@Tsc22d4!0.64!6.70!Tsc22d4;;chr10:5734907..5734920,-!p11@Esr1!0.64!3.35!Esr1;;chr2:27532754..27532815,+!p1@Rxra!0.63!114.25!Rxra;;chr11:98636531..98636559,-!p1@Nr1d1!0.63!21.96!Nr1d1;;chr7:6649134..6649167,-!p1@Zim1!0.63!20.84!Zim1;;chr11:11586218..11586285,+!p1@Ikzf1!0.63!11.91!Ikzf1;;chr6:16848347..16848391,-!p1@Tfec!0.63!4.47!Tfec;;chr14:100683912..100683947,-!p2@Klf12!0.62!11.16!Klf12;;chr2:90936978..90937023,+!p3@Sfpi1!0.62!6.70!Sfpi1;;chr8:123260252..123260264,+!p1@Irf8!0.61!25.68!Irf8;;chr6:99216488..99216534,-!p2@Foxp1!0.61!10.05!Foxp1;;chr1:52065508..52065522,+!p2@Stat4!0.61!3.72!Stat4;;chr1:138846047..138846074,-!p5@Nr5a2!0.61!3.35!Nr5a2;;chr9:96159225..96159249,+!p5@Tfdp2!0.60!3.35!Tfdp2;;chr15:103085690..103085710,-!p3@Nfe2!0.60!3.35!Nfe2;;chr11:83664334..83664353,+!p2@Hnf1b!0.60!2.98!Hnf1b;;chr5:115420882..115420896,-!p3@Hnf1a!0.60!2.98!Hnf1a;;chr6:144730427..144730508,-!p1@Sox5!0.59!21.58!Sox5;;chr11:11584970..11585030,+!p2@Ikzf1!0.59!4.47!Ikzf1;;chr7:52960555..52960662,+!p1@Dbp!0.58!29.40!Dbp;;chr7:31741761..31741800,-!p2@LOC100504922,p2@Usf2!0.58!21.21!Usf2;;chr7:25917492..25917512,-!p1@Pou2f2!0.58!5.21!Pou2f2;;chr6:39068210..39068251,-!p1@Parp12!0.57!15.26!Parp12;;chr16:92826249..92826325,-!p1@Runx1!0.57!7.81!Runx1;;chr10:67599432..67599444,-!p4@Arid5b!0.57!4.84!Arid5b;;chr14:19071466..19071550,-!p1@Nr1d2!0.56!21.96!Nr1d2;;chr4:135728581..135728668,+!p1@E2f2!0.56!15.26!E2f2;;chr14:18493386..18493464,+!p1@Thrb!0.56!11.91!Thrb;;chr17:87153462..87153473,+!p3@Epas1!0.56!11.91!Epas1;;chr7:51787434..51787448,-!p1@Spib!0.56!4.09!Spib;;chr2:166885917..166885930,-!p9@Znfx1!0.56!2.60!Znfx1;;chr4:122676078..122676090,+!p5@Mycl1!0.56!2.60!Mycl1;;chr14:63890491..63890516,-!p2@Gata4!0.56!2.60!Gata4;;chr11:53583960..53584007,+!p2@Irf1!0.55!6.33!Irf1;;chr6:108610766..108610781,+!p2@Bhlhe40!0.55!5.21!Bhlhe40;;chr15:85566014..85566045,+!p3@Ppara!0.55!3.72!Ppara;;chr1:38721792..38721845,-!p1@Aff3!0.55!3.35!Aff3;;chr2:77357593..77357606,-!p6@Zfp385b!0.55!2.98!Zfp385b;;chr6:99470943..99471024,-!p3@Foxp1!0.54!29.40!Foxp1;;chr10:127707602..127707633,+!p1@Stat2!0.54!27.54!Stat2;;chr19:55816398..55816409,+!p5@Tcf7l2!0.54!14.51!Tcf7l2;;chr13:37949830..37949861,+!p7@Rreb1!0.54!5.21!Rreb1;;chr5:31262699..31262712,-!p2@Preb!0.54!4.47!Preb;;chr4:97444537..97444555,+!p8@Nfia!0.53!7.07!Nfia;;chr8:124984566..124984595,-!p1@Snai3!0.53!4.09!Snai3;;chr2:27532912..27532923,+!p9@Rxra!0.53!2.60!Rxra;;chr17:87153028..87153049,+!p2@Epas1!0.52!62.52!Epas1;;chr8:87225670..87225697,+!p2@Lyl1!0.52!8.19!Lyl1;;chr2:91035197..91035237,-!p1@Nr1h3!0.52!5.58!Nr1h3;;chr11:120491440..120491474,-!p3@Mafg!0.52!3.72!Mafg;;chr16:42907676..42907797,+!p1@Zbtb20!0.51!37.59!Zbtb20;;chr6:90412582..90412601,+!p1@Klf15!0.51!13.40!Klf15;;chr1:120524520..120524528,+!p1@Tfcp2l1!0.51!7.81!Tfcp2l1;;chr10:82226613..82226641,-!p4@Nfyb!0.51!7.44!Nfyb;;chr6:39068163..39068176,-!p2@Parp12!0.51!4.84!Parp12;;chr1:135557526..135557551,-!p1@Zbed6!0.51!4.09!Zbed6;;chr1:138846009..138846038,-!p3@Nr5a2!0.51!2.60!Nr5a2;;chr10:79884592..79884621,-!p5@Tcf3!0.51!2.23!Tcf3;;chr9:74709664..74709671,+!p6@Onecut1!0.51!2.23!Onecut1;;chr12:57636034..57636087,-!p1@Nkx2-1!0.51!2.23!Nkx2-1;;chr15:103085864..103085876,-!p5@Nfe2!0.51!2.23!Nfe2;;chr5:77543897..77543911,-!p2@Hopx!0.50!4.84!Hopx;;chr9:106355684..106355744,+!p5@Pcbp4!0.50!3.72!Pcbp4;;chr5:104183579..104183600,+!p9@Aff1!0.50!2.60!Aff1;;chrX:7339938..7339963,+!p1@Tfe3!0.49!13.77!Tfe3;;chr9:69137672..69137702,+!p2@Rora!0.49!11.54!Rora;;chr6:90412608..90412630,+!p2@Klf15!0.49!5.21!Klf15;;chr15:81633203..81633215,+!p3@Tef!0.49!3.72!Tef;;chr1:87546583..87546595,+!p1@Sp100!0.49!3.35!Sp100;;chr6:134780337..134780355,+!p3@Crebl2!0.49!2.98!Crebl2;;chr2:180069370..180069409,-!p1@Gata5!0.49!2.60!Gata5;;chr6:134780234..134780288,+!p1@Crebl2!0.48!8.19!Crebl2;;chr4:6917921..6917970,-!p2@Tox!0.48!7.07!Tox;;chr14:17407970..17408015,-!p2@Rarb!0.48!6.70!Rarb;;chr16:43363152..43363186,+!p3@Zbtb20!0.48!5.58!Zbtb20;;chr6:108610610..108610676,+!p1@Bhlhe40!0.47!129.88!Bhlhe40;;chr8:118231723..118231740,-!p1@Maf!0.47!59.91!Maf;;chr11:90252223..90252240,-!p1@Hlf!0.47!21.96!Hlf;;chr11:85646303..85646329,+!p1@Tbx2!0.47!17.12!Tbx2;;chr14:65977415..65977426,+!p6@Zfp395!0.47!3.35!Zfp395;;chr14:18493480..18493494,+!p2@Thrb!0.47!2.23!Thrb;;chr11:5420954..5420969,+!p2@Xbp1!0.46!32.00!Xbp1;;chr19:10315179..10315241,-!p1@Gm98!0.46!27.17!Gm98;;chr8:125778192..125778217,+!p2@Zfp276!0.46!6.70!Zfp276;;chr4:87452180..87452196,-!p3@Mllt3!0.46!4.47!Mllt3;;chr5:104183477..104183548,+!p6@Aff1!0.46!4.47!Aff1;;chr4:6917971..6918000,-!p3@Tox!0.46!4.47!Tox;;chr10:67599375..67599386,-!p3@Arid5b!0.46!4.09!Arid5b;;chr14:52640355..52640369,-!p9@Zfp219!0.46!2.98!Zfp219;;chr13:83712735..83712761,+!p9@Mef2c!0.46!1.86!Mef2c;;chr14:76888344..76888348,+!p26@Tsc22d1!0.46!1.86!Tsc22d1;;chr14:76887566..76887579,+!p18@Tsc22d1!0.46!1.86!Tsc22d1;;chr11:90250999..90251013,-!p8@Hlf!0.46!1.86!Hlf;;chr11:53164494..53164501,+!p10@Aff4!0.46!1.86!Aff4;;chr11:98407264..98407295,-!p1@Ikzf3!0.46!1.86!Ikzf3;;chr4:44723520..44723544,-!p2@Pax5!0.46!1.86!Pax5;;chr3:3508024..3508069,+!p2@Hnf4g!0.46!1.86!Hnf4g;;chr6:16848443..16848459,-!p3@Tfec!0.46!1.86!Tfec;;chr2:164228702..164228719,+!p1@Rbpjl!0.46!1.86!Rbpjl;;chr1:181733737..181733755,-!p2@Ahctf1!0.45!7.44!Ahctf1;;chr18:3281750..3281776,-!p2@Crem!0.45!4.47!Crem;;chr12:37835120..37835133,+!p2@Meox2!0.45!2.98!Meox2;;chr15:75799634..75799645,+!p4@Zfp707!0.45!2.23!Zfp707;;chr4:97444471..97444514,+!p1@Nfia!0.44!65.87!Nfia;;chr3:95238432..95238455,+!p2@Arnt!0.44!13.77!Arnt;;chr8:108583550..108583595,+!p2@Nfatc3!0.44!10.79!Nfatc3;;chrX:103070960..103070973,-!p7@Atrx!0.44!2.60!Atrx;;chr9:51021788..51021802,+!p1@Pou2af1!0.44!2.23!Pou2af1;;chr13:59923965..59924003,-!p2@Zcchc6!0.44!2.23!Zcchc6;;chr11:53583544..53583559,+!p1@Irf1!0.43!40.94!Irf1;;chr9:30838206..30838285,+!p2@Zbtb44!0.43!30.89!Zbtb44;;chr7:20408047..20408125,-!p1@Bcl3!0.43!27.54!Bcl3;;chr18:3281034..3281104,-!p1@Crem!0.43!16.75!Crem;;chr14:65977324..65977372,+!p2@Zfp395!0.43!13.40!Zfp395;;chr10:70700755..70700772,-!p2@Tfam!0.43!11.16!Tfam;;chr1:52176378..52176401,+!p3@Stat1!0.43!6.70!Stat1;;chr18:36441119..36441158,+!p2@Pura!0.43!5.21!Pura;;chr4:87452200..87452229,-!p2@Mllt3!0.43!4.47!Mllt3;;chr1:186556375..186556404,-!p3@Hlx!0.43!3.72!Hlx;;chr5:67698263..67698272,+!p3@Slc30a9!0.43!2.98!Slc30a9;;chr11:100800771..100800798,-!p2@Stat3!0.42!15.26!Stat3;;chr3:89197057..89197114,-!p1@Zbtb7b!0.42!7.44!Zbtb7b;;chr13:64253718..64253763,-!p2@Zfp367!0.42!5.58!Zfp367;;chr14:65977427..65977452,+!p4@Zfp395!0.42!5.21!Zfp395;;chr5:3647720..3647733,-!p3@Gatad1!0.42!3.72!Gatad1;;chr16:8672238..8672254,-!p2@Carhsp1,p2@Gm9791!0.42!2.60!Carhsp1;;chr4:82151500..82151505,-!p11@Nfib!0.42!2.23!Nfib;;chr6:144157924..144157955,-!p2@Sox5!0.42!2.23!Sox5;;chr10:92773591..92773623,-!p1@Elk3!0.41!51.73!Elk3;;chr8:124806048..124806094,+!p1@Zfpm1!0.41!20.84!Zfpm1;;chr1:186556410..186556424,-!p1@Hlx!0.41!6.70!Hlx;;chr10:26093876..26093894,-!p2@L3mbtl3!0.41!4.84!L3mbtl3;;chr11:11585912..11585950,+!p6@Ikzf1!0.41!2.23!Ikzf1;;chr6:52154386..52154407,-!p2@Hoxa5!0.41!2.23!Hoxa5;;chrX:137077699..137077705,-!p8@Tsc22d3!0.41!2.23!Tsc22d3;;chr4:114730254..114730276,+!p2@Tal1!0.41!2.23!Tal1;;chr9:32348943..32349001,-!p1@Fli1!0.40!18.23!Fli1;;chr14:19071567..19071612,-!p2@Nr1d2!0.40!8.19!Nr1d2;;chr16:43363190..43363242,+!p2@Zbtb20!0.40!6.33!Zbtb20;;chr4:63064364..63064384,-!p1@Akna!0.40!5.95!Akna;;chr13:37870307..37870337,+!p5@Rreb1!0.40!4.47!Rreb1;;chr4:135728181..135728203,+!p2@E2f2!0.40!2.23!E2f2;;chr4:114729957..114730012,+!p3@Tal1!0.40!1.49!Tal1;;chr8:91568074..91568094,-!p1@Sall1!0.40!1.49!Sall1;;chr9:74709682..74709691,+!p3@Onecut1!0.40!1.49!Onecut1;;chr10:5734717..5734727,-!p12@Esr1!0.40!1.49!Esr1;;chr11:98407370..98407395,-!p3@Ikzf3!0.40!1.49!Ikzf3;;chr11:100720767..100720797,+!p4@Stat5a!0.40!1.49!Stat5a;;chr2:103264245..103264268,+!p2@Elf5!0.40!1.49!Elf5;;chr2:27531961..27531974,+!p7@Rxra!0.40!1.49!Rxra;;chr1:194982959..194983007,+!p5@Irf6!0.40!1.49!Irf6;;chr6:144158153..144158167,-!p19@Sox5!0.40!1.49!Sox5;;chr9:32503590..32503680,+!p1@Ets1!0.39!80.38!Ets1;;chr11:100800671..100800770,-!p1@Stat3!0.39!71.82!Stat3;;chr10:57206160..57206220,+!p1@Hsf2!0.39!23.44!Hsf2;;chr16:95680889..95680991,-!p1@Erg!0.39!17.49!Erg;;chr13:37918094..37918119,+!p6@Rreb1!0.39!4.09!Rreb1;;chr13:31717548..31717596,+!p1@Foxf2!0.39!3.72!Foxf2;;chr2:160698668..160698679,-!p4@Zhx3!0.39!3.35!Zhx3;;chr1:4486481..4486501,-!p2@Sox17!0.39!2.60!Sox17;;chr1:4486505..4486527,-!p5@Sox17!0.39!2.23!Sox17;;chr1:194979361..194979373,+!p2@Irf6!0.39!2.23!Irf6;;chr17:71201096..71201114,-!p6@Tgif1!0.39!1.86!Tgif1;;chr2:90936886..90936898,+!p5@Sfpi1!0.39!1.86!Sfpi1;;chr11: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.37!Rara;;chr11:98338697..98338709,-!p9@Ikzf3!0.14!0.37!Ikzf3;;chr11:59319921..59319944,-!p5@Zkscan17!0.14!0.37!Zkscan17;;chr11:100721640..100721658,+!p2@Stat5a!0.14!0.37!Stat5a;;chr11:96164905..96164919,+!p2@Hoxb5!0.14!0.37!Hoxb5;;chr10:5636354..5636373,-!p2@Esr1!0.14!0.37!Esr1;;chr10:119913266..119913277,-!p6@Hmga2!0.14!0.37!Hmga2;;chr12:109241411..109241422,-!p8@Bcl11b!0.14!0.37!Bcl11b;;chr11:23671230..23671264,-!p6@Rel!0.14!0.37!Rel;;chr11:96880072..96880079,+!p1@Sp6!0.14!0.37!Sp6;;chr11:52095821..52095836,-!p3@Tcf7!0.14!0.37!Tcf7;;chr11:96829969..96829987,-!p2@Sp2!0.14!0.37!Sp2;;chr11:98407142..98407159,-!p5@Ikzf3!0.14!0.37!Ikzf3;;chr6:115311308..115311317,+!p10@Pparg!0.14!0.37!Pparg;;chr5:122500227..122500240,-!p6@Cux2!0.14!0.37!Cux2;;chr6:144157880..144157889,-!p25@Sox5!0.14!0.37!Sox5;;chr7:122989676..122989687,-!p8@Sox6!0.14!0.37!Sox6;;chr5:148081667..148081678,+!p3@Pdx1!0.14!0.37!Pdx1;;chr5:148081686..148081715,+!p1@Pdx1!0.14!0.37!Pdx1;;chr6:115372058..115372085,+!p3@Pparg!0.14!0.37!Pparg;;chr6:52176144..52176161,-!p2@Hoxa9!0.14!0.37!Hoxa9;;chr5:77544170..77544181,-!p6@Hopx!0.14!0.37!Hopx;;chr5:120285161..120285176,+!p2@Tbx5!0.14!0.37!Tbx5;;chr5:77543935..77543947,-!p4@Hopx!0.14!0.37!Hopx;;chr6:99385340..99385362,-!p11@Foxp1!0.14!0.37!Foxp1;;chr6:52663997..52664043,+!p2@Tax1bp1!0.14!0.37!Tax1bp1;;chr5:108155037..108155060,-!p2@Gfi1!0.14!0.37!Gfi1;;chr6:144157991..144158007,-!p9@Sox5!0.14!0.37!Sox5;;chr6:99216360..99216372,-!p8@Foxp1!0.14!0.37!Foxp1;;chr5:138187918..138187929,+!p20@Tsc22d4!0.14!0.37!Tsc22d4;;chr14:63890691..63890718,-!p8@Gata4!0.14!0.37!Gata4;;chr12:57636178..57636194,-!p2@Nkx2-1!0.14!0.37!Nkx2-1;;chr12:3806003..3806031,+!p11@Dnmt3a!0.14!0.37!Dnmt3a;;chr13:83643136..83643158,+!p7@Mef2c!0.14!0.37!Mef2c;;chr12:39510090..39510114,+!p6@Etv1!0.14!0.37!Etv1;;chr14:55331234..55331245,-!p4@Cebpe!0.14!0.37!Cebpe;;chr13:83643232..83643254,+!p5@Mef2c!0.14!0.37!Mef2c;;chr12:87702062..87702081,+!p4@Esrrb!0.14!0.37!Esrrb;;chr12:39510290..39510309,+!p5@Etv1!0.14!0.37!Etv1;;chr12:57636240..57636256,-!p4@Nkx2-1!0.14!0.37!Nkx2-1;;chr12:57637595..57637608,-!p7@Nkx2-1!0.14!0.37!Nkx2-1;;chr15:40486805..40486812,+!p13@Zfpm2!0.14!0.37!Zfpm2;;chr14:52935831..52935842,-!p11@Sall2!0.14!0.37!Sall2;;chr13:31717614..31717628,+!p3@Foxf2!0.14!0.37!Foxf2;;chr14:52640344..52640350,-!p17@Zfp219!0.14!0.37!Zfp219;;chr14:55331167..55331204,-!p3@Cebpe!0.14!0.37!Cebpe;;chr15:103083199..103083215,-!p8@Nfe2!0.14!0.37!Nfe2;;chr12:57637732..57637777,-!p5@Nkx2-1!0.14!0.37!Nkx2-1;;chr14:27813679..27813693,+!p2@Hesx1!0.14!0.37!Hesx1;;chr14:17407671..17407684,-!p7@Rarb!0.14!0.37!Rarb;;chr13:31717671..31717682,+!p5@Foxf2!0.14!0.37!Foxf2;;chr9:118387300..118387317,+!p1@Eomes!0.14!0.37!Eomes;;chr7:50817698..50817710,+!p4@Zfp658!0.14!0.37!Zfp658;;chr7:25917459..25917474,-!p2@Pou2f2!0.14!0.37!Pou2f2;;chr9:63869918..63869936,-!p9@Smad6!0.14!0.37!Smad6;;chr7:52960888..52960902,+!p7@Dbp!0.14!0.37!Dbp;;chr8:86590801..86590818,+!p2@Rfx1!0.14!0.37!Rfx1;;chr7:31065553..31065603,+!p@chr7:31065553..31065603,+!0.14!0.37!Thap8;;chr8:125921662..125921675,+!p5@Tcf25!0.14!0.37!Tcf25;;chr8:81551868..81551877,+!p13@Zfp827!0.14!0.37!Zfp827;;chr7:38554745..38554756,-!p7@Zfp536!0.14!0.37!Zfp536;;chr7:35841438..35841447,-!p4@Cebpg!0.14!0.37!Cebpg;;chr18:69681575..69681579,+!p41@Tcf4!0.14!0.37!Tcf4;;chr16:94085162..94085179,+!p3@Sim2!0.14!0.37!Sim2;;chr19:23215616..23215627,+!p9@Klf9!0.14!0.37!Klf9;;chr17:71201050..71201078,-!p9@Tgif1!0.14!0.37!Tgif1;;chr15:81494404..81494415,+!p2@L3mbtl2!0.14!0.37!L3mbtl2;;chr16:92826232..92826245,-!p4@Runx1!0.14!0.37!Runx1;;chr16:55838779..55838788,-!p9@Nfkbiz!0.14!0.37!Nfkbiz;;chr17:51972575..51972595,-!p13@Satb1!0.14!0.37!Satb1;;
@@ Line 45: / Line 45: @@
 |is_obsolete=
 |library_id=CNhs11103
-|library_id_phase_based=1:CNhs11103
+|library_id_phase_based=2:CNhs11103
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/mouse#cage;sample;716
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/mouse#cage;sample;716
+|mm10bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/liver%252c%2520neonate%2520N07.CNhs11103.716-20H2.mm10.nobarcode.bam
+|mm10ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/liver%252c%2520neonate%2520N07.CNhs11103.716-20H2.mm10.nobarcode.ctss.bed.gz
+|mm9bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/liver%252c%2520neonate%2520N07.CNhs11103.716-20H2.mm9.nobarcode.bam
+|mm9ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/liver%252c%2520neonate%2520N07.CNhs11103.716-20H2.mm9.ctss.bed.gz
+|mm9fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/liver%252c%2520neonate%2520N07.CNhs11103.716-20H2.mm9.nobarcode.rdna.fa.gz
 |name=liver, neonate N07
 |namespace=FANTOM5
@@ Line 51: / Line 60: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs11103,LSID733,release008,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
 |repeat_enrich_byfamily=0.323457453224679,0,0,0,0,0,0.124599272207303,0,0,0,0,0.0530594844221804,0,0,0,0,0.068699362409361,0,-0.0544946260638526,0,0,0,0.556903658811345,0,0,0,0,0,0,0,0,0,0.386797548724549,0,0,0,0.886408204654707,0,-0.140623363086465,-0.0639054029812957,-0.0840589610700819,0.459742002893228,-0.0282519649274866,0,0,0,0,0,0,0,0,0,0,0,0,0.259596892755332,0,0,0,0,0,0,0.257210908134296,0.0413520668562263,0,0,0.0234479730767194,0.246253001471959,-0.158091042771083,0.0167133622709929,0,0.0639288615908838,-0.0165291217426982,0,0.395948777723257,0,0,-0.12770655579846,0.290493323914138,0.246770845478865,0,0,0,0,0,0,0.132738062710229,0.370121159666293,0.156407904291013,0,0,0,0,0
@@ Line 88: / Line 97: @@
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 |xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_mouse;search_select_hide=table111:716-20H2;search_select_hide=table117:716-20H2
 }}

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FF:716-20H2: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 19:19, 4 June 2020

CNhs11103

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0