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| ==GRAPH==
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| {{#vardefine:motifscores|{{#ask:[[Category:NonRedundantMotifCluster]]
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| |?Motifscore
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| |format=array
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| |offset=0
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| |limit=
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| |mainlabel=-
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| |sort=
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| |order=
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| |link=none
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| |headers=hide
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| |titles=show
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| |hidegaps=none
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| |sep=,
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| |propsep=<PROP>
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| |manysep=<MANY>
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| |recordsep=<RCRD>
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| |headersep=
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| }}
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| }}
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|
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| {{#vardefine:categories|{{#ask:[[Category:NonRedundantMotifCluster]]
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| |?Motifdb
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| |format=array
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| |offset=0
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| |limit=
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| |mainlabel=-
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| |sort=
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| |order=
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| |link=none
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| |headers=hide
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| |titles=show
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| |hidegaps=none
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| |sep=,
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| |propsep=<PROP>
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| |manysep=<MANY>
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| |recordsep=<RCRD>
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| |headersep=
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| }}
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| }}
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| {{#vardefine:motifids|{{#ask:[[Category:NonRedundantMotifCluster]]
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| |?Motifid
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| |format=array
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| |offset=0
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| |limit=
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| |mainlabel=-
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| |sort=
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| |order=
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| |link=none
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| |headers=hide
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| |titles=show
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| |hidegaps=none
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| |sep=,
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| |propsep=<PROP>
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| |manysep=<MANY>
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| |recordsep=<RCRD>
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| |headersep=
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| }}
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| }}
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|
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| {{TestTemplate|{{#var:motifscores}}|{{#var:categories}}|{{#var:motifids}}|,|Motif Scores, 2013|motifs}}
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|
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|
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| {{#vardefine:samples|
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| {{#ask:[[Concept:FF_samples_withname]][[Sample_species::Human (Homo sapiens)]]
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| |?Sample category
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| |format=array
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| |offset=0
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| |limit=
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| |mainlabel=-
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| |sort=
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| |order=
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| |link=none
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| |headers=hide
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| |titles=show
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| |hidegaps=none
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| |sep=,
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| |propsep=<PROP>
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| |manysep=<MANY>
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| |recordsep=<RCRD>
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| |headersep=
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| }}
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| }}
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|
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| {{PieChart|data={{#var:samples}}
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| |delimiter=,
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| |chartTitle=Samples General View
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| |seriesName=category
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| |chartSize=300
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| |renderTo=container
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| |percentageDecimals=1
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| }}
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|
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|
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| {{#ask:[[Category:Novel_motif]]
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| |?#
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| |?name
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| |?novel motifs human sample pval
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| |format=table
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| |offset=0
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| |limit=10
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| |mainlabel=
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| |class=sortable wikitable smwtable
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| }}
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|
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| {{#ask: [[Category:FFCP]][[EntrezGene::165]]
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| | format=count
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| }}
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|
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| ==TFactors====
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| {{#vardefine:geneids_content|{{#ask:[[Category:EntrezGene]][[tax_id::9606]][[tf?::true]]
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| |?GeneID
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| |?Symbol
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| |?Description
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| |format=array
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| |headers=hide
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| |mainlabel=-
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| |sep=:
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| |propsep=/
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| |limit=100
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| |manysep=<MANY>
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| |recordsep=<RCRD>
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| }}
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| }}
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| {{#vardefine:db_content}}
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| {{#arraydefine:geneids_array|{{#var:geneids_content}}|:}}
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| {{
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| #loop: j
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| | 0
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| | {{#arraysize:geneids_array}}
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| | <nowiki/>
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| {{#vardefine:ID|{{#explode:{{#arrayindex:geneids_array| {{#var:j}} }}|/|0 }} }}
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| {{#vardefine:Symbol|{{#explode:{{#arrayindex:geneids_array| {{#var:j}} }}|/|1 }} }}
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| {{#vardefine:Description|{{#explode:{{#arrayindex:geneids_array| {{#var:j}} }}|/|2 }} }}
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| {{#vardefine:PeakCount|{{#ask: [[Category:FFCP]][[EntrezGene::{{#var:ID}}]]|format=count}}}}
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|
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| {{#arraydefine: defined_array{{#var:j}} |{{#var:ID}}/{{#var:Symbol}}/{{#var:Description}}/{{#var:PeakCount}}}}
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| {{#vardefine:db_content|{{#arrayprint:defined_array{{#var:j}} }}:{{#var:db_content}} }}
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|
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| }}
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|
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| <div class="toccolours mw-collapsible" style="width:700px">
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| General View
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| <div class="mw-collapsible-content">
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| {{PeakCountPerSample|{{#var:db_content}}|||:|/|TF Factors and CAGE peak counts graph|Source: FANTOM5 Project,RIKEN DGT||}}
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| </div>
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| </div>
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|
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|
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|
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| ==TABLE==
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| Human transcription factors.
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|
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| <html>
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| <style type="text/css" title="currentStyle">
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| @import "/resource_browser/rb_js/datatables/media/css/jquery.dataTables.css";
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| </style>
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| <script type="text/javascript" src="/resource_browser/rb_js/datatables/media/js/jquery.dataTables.min.js"></script>
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|
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| <script type="text/javascript">
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| $(document).ready(function() {
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| $('.tf_table').dataTable( {
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| "iDisplayLength": 25,
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| "aLengthMenu": [[25, 100, -1], [25, 100, "All"]],
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| "aaSorting": [[1, "asc"]],
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| "aoColumnDefs": [{"bSortable": false, "aTargets": ["_all"] }]
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| } );
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| } );
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| </script>
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| </html>
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|
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| {{#ask:[[Category:EntrezGene]][[tax_id::9606]][[tf?::true]]|mainlabel=EntreGene ID|?symbol|?description|format=ttable|class=tf_table|searchlabel=|limit=1700}}
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