Template:F5samples: Difference between revisions
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{{#ifexpr: {{#pos:{{{fantom_cat}}}|ttp}}| | {{#ifexpr: {{#pos:{{{fantom_cat}}}|ttp}}| | ||
<tr><th scope="row" align="right">FANTOM CAT:</th><td>{{ #vardefine: i | 1 }}{{#arraymap:{{{fantom_cat}}}|;;|$|[$ {{ #var: i }}{{ #vardefine: i | {{ #expr: {{ #var: i }} + 1 }} }}]|, }}</td></tr>|}} | <tr><th scope="row" align="right">FANTOM CAT:</th><td>{{ #vardefine: i | 1 }}{{#arraymap:{{{fantom_cat}}}|;;|$|[$ {{ #var: i }}{{ #vardefine: i | {{ #expr: {{ #var: i }} + 1 }} }}]|, }}</td></tr>|}} | ||
{{#ifeq: {{{sample_species}}} | Human (Homo sapiens) | <tr><th scope="row" align="right">CAGEd-oPOSSUM:</th><td>[http://cagedop.cmmt.ubc.ca/CAGEd_oPOSSUM/results/precomputed/human/{{{id}}}/results.html link] </td></tr> | }}{{#ifeq: {{{sample_species}}} | Mouse (Mus musculus) | <tr><th scope="row" align="right">CAGEd-oPOSSUM:</th><td>[http://cagedop.cmmt.ubc.ca/CAGEd_oPOSSUM/results/precomputed/mouse/{{{id}}}/results.html link] </td></tr> | }}{{#ifexpr: {{#pos:{{{zenbu_report}}}|ttp}}|<tr><th scope="row" align="right">ZENBU report :</th><td>[{{{zenbu_report}}} link] </td></tr>|}} </table> | {{#ifeq: {{{sample_species}}} | Human (Homo sapiens) | <tr><th scope="row" align="right">CAGEd-oPOSSUM:</th><td>[http://cagedop.cmmt.ubc.ca/CAGEd_oPOSSUM/results/precomputed/human/{{{id}}}/results.html link] </td></tr> | }}{{#ifeq: {{{sample_species}}} | Mouse (Mus musculus) | <tr><th scope="row" align="right">CAGEd-oPOSSUM:</th><td>[http://cagedop.cmmt.ubc.ca/CAGEd_oPOSSUM/results/precomputed/mouse/{{{id}}}/results.html link] </td></tr> | }}{{#ifexpr: {{#pos:{{{zenbu_report}}}|ttp}}|<tr><th scope="row" align="right">ZENBU report :</th><td><span class="plainlinks">[{{{zenbu_report}}} link]</span> </td></tr>|}} </table> | ||
{|class="wikitable mw-collapsible mw-collapsed" style="width:auto" | {|class="wikitable mw-collapsible mw-collapsed" style="width:auto" | ||
! Additional information | ! Additional information | ||
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for(i=0;i<sub_content.length;i++){ | for(i=0;i<sub_content.length;i++){ | ||
var temp =sub_content[i]; | var temp=sub_content[i]; | ||
if(temp != null){ | if(temp!= null){ | ||
if(temp.length>2){ | if(temp.length>2){ | ||
var sub_sub_content=sub_content[i].split("!"); | var sub_sub_content=sub_content[i].split("!"); | ||
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buttons: ['copyHtml5', 'excelHtml5', 'csvHtml5', 'pdfHtml5'], | buttons: ['copyHtml5', 'excelHtml5', 'csvHtml5', 'pdfHtml5'], | ||
lengthMenu: [[10, 50, -1], [10, 50, "All"]], | lengthMenu: [[10, 50, -1], [10, 50, "All"]], | ||
columnDefs: [{ targets: [0], visible: true},{ targets: [0], visible: true}], | |||
columns:[ | |||
{title:"MCL coexpression id", visible:true}, | |||
{title:"Coexpression_dpi_cluster_scores_median_value", visible:true} | |||
], | |||
order: [[ 1, 'desc' ]] | order: [[ 1, 'desc' ]] | ||
}); | }); | ||
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|Mouse (Mus musculus)= | |Mouse (Mus musculus)= | ||
{{#arraymap:{{#explode:{{{profile_hcage}}}|,|0}}|&|$ | {{#arraymap:{{#explode:{{{profile_hcage}}}|,|0}}|&|$ | ||
|<h3>$</h3>{{#ask:[[Coexpression_dpi_cluster_scores_median_ffid::{{PAGENAME}}]][[Coexpression_dpi_cluster_scores_median_cnhs::{{#replace:$|CNhs|}}]]|?=MCL coexpression id|?Coexpression_dpi_cluster_scores_median_value|format=ttable|class=relative-exp-of-coexp stripe cell-border order-column compact|searchlabel=}} | |<h3>$</h3>{{#ask:[[Coexpression_dpi_cluster_scores_median_ffid::{{PAGENAME}}]][[Coexpression_dpi_cluster_scores_median_cnhs::{{#replace:$|CNhs|}}]]|?=MCL coexpression id|?Coexpression_dpi_cluster_scores_median_value|format=ttable|class=relative-exp-of-coexp stripe cell-border order-column compact|headers=hide|searchlabel=}} | ||
|<br><br> | |<br><br> | ||
}}}} | }}}} |
Latest revision as of 18:04, 14 March 2022
Name: | {{{name}}} |
---|---|
Species: | {{{sample_species}}} |
Library ID: | {{{library_id}}} |
Sample type: | {{{sample_category}}} |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
|
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
{{{is_a}}}
part_of relathionship
{{{part_of}}}
has_quality relathionship
{{{has_quality}}}
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
NA
DOID: Disease
NA
UBERON: Anatomy
NA
FF: FANTOM5
NA
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA