Personal tools

FFCP PHASE1:Mm9::chr11:106134144..106134174,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr11:106134144..106134174,-
|short_description=p3@Smarcd2
|description=CAGE_peak_3_at_Smarcd2_5end
|association_with_transcript=111bp_to_ENSMUST00000021052,NM_001130187,uc007lyp.2_5end
|EntrezGene=83796
|EntrezGene=83796
|HGNC=
|HGNC=
|UniProt=Q99JR8,Q3TXH6
|UniProt=Q99JR8,Q3TXH6
|association_with_transcript=111bp_to_ENSMUST00000021052,NM_001130187,uc007lyp.2_5end
|description=CAGE_peak_3_at_Smarcd2_5end
|id=chr11:106134144..106134174,-
|ontology_enrichment_disease=
|phase1_expression=3.36312578920067,1.74487703819681,0.909998478779072,2.41971369045464,1.50268718983904,2.51818907867835,2.10251376535973,0,0.422366166455,0.234064526321993,0.171217968225505,0.239316476986009,0,0.0874204024189974,1.33243904726265,2.02475267389826,1.39912375625629,0.473193248037357,0.411343300817216,0,1.87095238332354,2.38298282882125,1.56719873483361,1.91990907352088,0.68822784320151,2.29692785646008,3.87685796543167,2.37018355954478,1.90023419456374,6.30075324399827,1.77384408524244,1.90509202037889,3.07532393792285,0,5.19932915552294,4.82080471539628,5.71674197534634,0.418531630736908,1.5626706890476,0,0.588231488031014,0,0.971020706062307,2.26614272356039,0.912392380975631,1.83546752161682,9.38869613217647,1.09012578190223,3.29529274101708,1.94429899074283,4.19959264876088,1.43752564364972,0,0.725362142011344,0,2.57259436035947,4.01146815914259,1.54701627683233,0.606949382578793,0.528990979272033,0,0.677689064138264,1.77858959222228,3.1496490104849,1.97773272513395,3.5524005747305,2.99600110518405,1.15265491596466,0.725827286159344,0.270011876663381,0.841299845405528,0,0.662605622854841,0.61245399607477,0.766763768145891,0,1.10115880999389,0.383062014255563,0.307213066512487,0.131886287730194,0.640413505216868,1.56274011167028,0,0,0.763991238884051,0.294628585473668,0.854230084794618,0.559198337475902,0.605809546665472,0.755715601067855,2.6087803983151,1.72084775396277,1.3599426674155,1.61910957491345,1.29955283489534,3.13618820968135,1.96622188184453,2.04516387093669,2.07828803682295,1.06001872353102,2.25349471642689,2.56652954828636,0,0,1.08245520505607,1.26679932737549,0.505524445014783,2.05530983494308,0.258937883647172,1.7813056687779,3.99016251562112,1.82679286987285,3.45923245884088,1.80867168663147,2.82212897125692,3.89566433121994,1.73036477414062,1.01219549843938,3.5384422077995,2.26473589926373,1.76673214768315,1.93950101254089,1.86391761218122,2.34224637609238,3.97948742945565,1.02182822083437,1.31796636956512,0.599902730993408,1.77898317902291,0.299581278809645,0,0.251308704225729,0.173824320192276,0.511430914660661,0.62336413367868,0.486723789203273,3.36069900706044,3.73220911830279,1.76905930903572,0.841767423545896,1.43132487258974,2.5289231487682,1.26043490863744,2.10986744970001,1.15662048557257,1.15302348256365,2.34254311399322,2.58703370739016,2.80238390812695,2.08016688184601,2.99116911078713,3.94552318369635,4.72680323683516,4.52727816478817,3.08673204611915,1.99034266818493,0.702213187313235,1.28673953557358,1.42081749697796,0.621377317606506,2.57978665979206,0.720248245844059,1.42046841351126,0.983821158737019,1.07986979021165,0.697601834251224,1.07309360559848,0.817357396570186,1.48103864922132,1.64167464079095,0.729619285912702,1.46199987425332,1.09775057645525,1.07365135008297,0.630869845692382,0.411618449517138,2.31293148088659,1.85115396664481,2.34617075588757,3.71578674976702,2.06187938115349,2.8235693447268,2.00140239460383,2.09248188723815,0.474529061544512,1.4822905925161,2.5133520880027,2.18852119245266,2.53453313254856,2.69645822596266,2.37751854862164,2.98711909881551,4.74169752382704,2.97046132785295,2.25415471346161,2.03651327845314,2.32742984601151,1.82353131714828,2.59269802209455,2.06654207171443,2.04098346193787,1.85095745882701,2.07516838961004,1.33476084572875,2.55526693647164,1.79889689907883,2.23146133527353,1.4470629585145,2.03700681425136,1.15078454980324,2.10775794807546,1.64736847912849,4.31304619582064,2.23284568601102,0.936113019343682,2.02063102357689,1.07638448113147,2.8946611281802,2.95605104266567,1.89491411770485,3.25929952884052,3.39490171550376,3.98973422090454,2.34508760418542,4.04674189506223,4.68320754858717,2.83743259391144,4.4292937929755,5.42146213435456,2.78567635016755,2.07221978239075,3.03763023021174,0,0,1.96705709207614,3.58717770196152,0.481651769963376,0.586058432961016,1.47541450839008,0.504941854408746,0.315508219416257,0.390438744296638,1.07711698866399,1.67278158566786,2.45078541490634,0,0.404810701674894,1.16902343164525,1.58115111178609,1.60660658210904,2.55492153374884,5.52003371368491,3.4206261464251,3.62934270539578,2.65490276679926,3.15614827001476,3.32555912661226,3.20628635585027,3.54362271456927,1.84461088766356,2.06742634534577,3.63533729477506,2.49548164869305,1.8962205476149,1.05418608574999,2.06271086496374,1.02131881726136,2.52085531643834,2.58717367565509,2.57204442037911,2.48276327099183,2.85390108163313,3.45552943264454,2.43571959291679,1.87737366450968,1.0591603543191,1.32317038832977,2.80306630000516,4.68246837418126,3.86002719540197,5.13301079213487,4.43180429311665,3.49777003955821,0.556275906031529,1.36696704638282,3.714963623338,1.66675074632741,1.31857919903284,1.50363650493128,0.915112692826091,1.35982743995084,1.25956307091292,1.24379976423981,1.90934123603023,3.00519193902079,2.43983360552218,3.13215488383224,2.29997125615916,2.40198820120795,2.02296519577231,3.14083131756277,1.83229159388821,2.20345454596048,1.86401793926078,0.56369293868419,3.88743019714345,2.15096037594227,3.30567020184881,3.09983576346555,4.73077151374179,1.5256441023948,3.77592716047455,2.20204623293993,2.41584120826006,1.44015003128933,1.58005560314089,5.87903124341476,4.72470402958205,5.06691209613401,5.19177417435696,3.17890167650024,2.40390899039938,2.36303243479324,2.72609414859999,4.19137436602499,2.82313318383153,2.43644701849381,2.21287235772758,2.22066114144981,1.58711268530648,1.10992976687032,0.358855426437903,0.671538465456314,3.09103350451505,1.87682475451182,3.6630324853453,4.07299920250225,2.50786052017682,0.564751842617067,0,0,0.343706364687375,0,0.755393897389701,0,0,0,0.51776031175182,1.764384908931,2.39414924040619,2.56100408631201,4.132814190161,3.35381060204772,2.94149613520023,1.33348036680969,2.67845574410562,1.92551525755089,2.52697211763797,1.2673964994512,2.26351609663291,2.62196220915671,1.92075457214608,2.01024141344646,1.42888107384922,2.43357084484197,2.31491064556446,3.70877310722976,1.32479028120958,1.37147700954166,0.887379030796687,2.14592570952589,1.74415699958794,1.97629698872194,2.70766745253365,1.82927972872773,3.41990624869196,2.98769050460896,0.561142271657738,1.66089025373844,1.67457620038458,1.22769312950907,2.32405261778949,0.964533054905707,3.74715866906919,3.97683734357194,4.94203424311086,1.72159498861959,3.30887128679273,1.62307484934295
|phase1_expression=3.36312578920067,1.74487703819681,0.909998478779072,2.41971369045464,1.50268718983904,2.51818907867835,2.10251376535973,0,0.422366166455,0.234064526321993,0.171217968225505,0.239316476986009,0,0.0874204024189974,1.33243904726265,2.02475267389826,1.39912375625629,0.473193248037357,0.411343300817216,0,1.87095238332354,2.38298282882125,1.56719873483361,1.91990907352088,0.68822784320151,2.29692785646008,3.87685796543167,2.37018355954478,1.90023419456374,6.30075324399827,1.77384408524244,1.90509202037889,3.07532393792285,0,5.19932915552294,4.82080471539628,5.71674197534634,0.418531630736908,1.5626706890476,0,0.588231488031014,0,0.971020706062307,2.26614272356039,0.912392380975631,1.83546752161682,9.38869613217647,1.09012578190223,3.29529274101708,1.94429899074283,4.19959264876088,1.43752564364972,0,0.725362142011344,0,2.57259436035947,4.01146815914259,1.54701627683233,0.606949382578793,0.528990979272033,0,0.677689064138264,1.77858959222228,3.1496490104849,1.97773272513395,3.5524005747305,2.99600110518405,1.15265491596466,0.725827286159344,0.270011876663381,0.841299845405528,0,0.662605622854841,0.61245399607477,0.766763768145891,0,1.10115880999389,0.383062014255563,0.307213066512487,0.131886287730194,0.640413505216868,1.56274011167028,0,0,0.763991238884051,0.294628585473668,0.854230084794618,0.559198337475902,0.605809546665472,0.755715601067855,2.6087803983151,1.72084775396277,1.3599426674155,1.61910957491345,1.29955283489534,3.13618820968135,1.96622188184453,2.04516387093669,2.07828803682295,1.06001872353102,2.25349471642689,2.56652954828636,0,0,1.08245520505607,1.26679932737549,0.505524445014783,2.05530983494308,0.258937883647172,1.7813056687779,3.99016251562112,1.82679286987285,3.45923245884088,1.80867168663147,2.82212897125692,3.89566433121994,1.73036477414062,1.01219549843938,3.5384422077995,2.26473589926373,1.76673214768315,1.93950101254089,1.86391761218122,2.34224637609238,3.97948742945565,1.02182822083437,1.31796636956512,0.599902730993408,1.77898317902291,0.299581278809645,0,0.251308704225729,0.173824320192276,0.511430914660661,0.62336413367868,0.486723789203273,3.36069900706044,3.73220911830279,1.76905930903572,0.841767423545896,1.43132487258974,2.5289231487682,1.26043490863744,2.10986744970001,1.15662048557257,1.15302348256365,2.34254311399322,2.58703370739016,2.80238390812695,2.08016688184601,2.99116911078713,3.94552318369635,4.72680323683516,4.52727816478817,3.08673204611915,1.99034266818493,0.702213187313235,1.28673953557358,1.42081749697796,0.621377317606506,2.57978665979206,0.720248245844059,1.42046841351126,0.983821158737019,1.07986979021165,0.697601834251224,1.07309360559848,0.817357396570186,1.48103864922132,1.64167464079095,0.729619285912702,1.46199987425332,1.09775057645525,1.07365135008297,0.630869845692382,0.411618449517138,2.31293148088659,1.85115396664481,2.34617075588757,3.71578674976702,2.06187938115349,2.8235693447268,2.00140239460383,2.09248188723815,0.474529061544512,1.4822905925161,2.5133520880027,2.18852119245266,2.53453313254856,2.69645822596266,2.37751854862164,2.98711909881551,4.74169752382704,2.97046132785295,2.25415471346161,2.03651327845314,2.32742984601151,1.82353131714828,2.59269802209455,2.06654207171443,2.04098346193787,1.85095745882701,2.07516838961004,1.33476084572875,2.55526693647164,1.79889689907883,2.23146133527353,1.4470629585145,2.03700681425136,1.15078454980324,2.10775794807546,1.64736847912849,4.31304619582064,2.23284568601102,0.936113019343682,2.02063102357689,1.07638448113147,2.8946611281802,2.95605104266567,1.89491411770485,3.25929952884052,3.39490171550376,3.98973422090454,2.34508760418542,4.04674189506223,4.68320754858717,2.83743259391144,4.4292937929755,5.42146213435456,2.78567635016755,2.07221978239075,3.03763023021174,0,0,1.96705709207614,3.58717770196152,0.481651769963376,0.586058432961016,1.47541450839008,0.504941854408746,0.315508219416257,0.390438744296638,1.07711698866399,1.67278158566786,2.45078541490634,0,0.404810701674894,1.16902343164525,1.58115111178609,1.60660658210904,2.55492153374884,5.52003371368491,3.4206261464251,3.62934270539578,2.65490276679926,3.15614827001476,3.32555912661226,3.20628635585027,3.54362271456927,1.84461088766356,2.06742634534577,3.63533729477506,2.49548164869305,1.8962205476149,1.05418608574999,2.06271086496374,1.02131881726136,2.52085531643834,2.58717367565509,2.57204442037911,2.48276327099183,2.85390108163313,3.45552943264454,2.43571959291679,1.87737366450968,1.0591603543191,1.32317038832977,2.80306630000516,4.68246837418126,3.86002719540197,5.13301079213487,4.43180429311665,3.49777003955821,0.556275906031529,1.36696704638282,3.714963623338,1.66675074632741,1.31857919903284,1.50363650493128,0.915112692826091,1.35982743995084,1.25956307091292,1.24379976423981,1.90934123603023,3.00519193902079,2.43983360552218,3.13215488383224,2.29997125615916,2.40198820120795,2.02296519577231,3.14083131756277,1.83229159388821,2.20345454596048,1.86401793926078,0.56369293868419,3.88743019714345,2.15096037594227,3.30567020184881,3.09983576346555,4.73077151374179,1.5256441023948,3.77592716047455,2.20204623293993,2.41584120826006,1.44015003128933,1.58005560314089,5.87903124341476,4.72470402958205,5.06691209613401,5.19177417435696,3.17890167650024,2.40390899039938,2.36303243479324,2.72609414859999,4.19137436602499,2.82313318383153,2.43644701849381,2.21287235772758,2.22066114144981,1.58711268530648,1.10992976687032,0.358855426437903,0.671538465456314,3.09103350451505,1.87682475451182,3.6630324853453,4.07299920250225,2.50786052017682,0.564751842617067,0,0,0.343706364687375,0,0.755393897389701,0,0,0,0.51776031175182,1.764384908931,2.39414924040619,2.56100408631201,4.132814190161,3.35381060204772,2.94149613520023,1.33348036680969,2.67845574410562,1.92551525755089,2.52697211763797,1.2673964994512,2.26351609663291,2.62196220915671,1.92075457214608,2.01024141344646,1.42888107384922,2.43357084484197,2.31491064556446,3.70877310722976,1.32479028120958,1.37147700954166,0.887379030796687,2.14592570952589,1.74415699958794,1.97629698872194,2.70766745253365,1.82927972872773,3.41990624869196,2.98769050460896,0.561142271657738,1.66089025373844,1.67457620038458,1.22769312950907,2.32405261778949,0.964533054905707,3.74715866906919,3.97683734357194,4.94203424311086,1.72159498861959,3.30887128679273,1.62307484934295
|short_description=p3@Smarcd2
}}
}}

Revision as of 16:13, 17 April 2012

Short description:p3@Smarcd2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Smarcd2_5end
Coexpression cluster:NA
Association with transcript: 111bp_to_ENSMUST00000021052, NM_001130187, uc007lyp.2_5end
EntrezGene:Smarcd2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Smarcd2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.36
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.42
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.02
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I13.88
GP2+ M cell, pool3.CNhs13240.11847-124I22.37
Ileum epithelium, pool1.CNhs13199.10252-104B91.90
Ileum epithelium, pool2.CNhs13232.10253-104C16.30
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.20
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B79.39
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.20
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.57
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C83.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.06
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.78
adrenal gland, embryo E14.CNhs11038.406-44C53.99
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I13.46
adrenal gland, embryo E18.CNhs11026.1262-18F51.81
adrenal gland, neonate N00.CNhs11191.1311-23C12.82
adrenal gland, neonate N25.CNhs11223.1377-27I33.90
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F52.26
bone (os femoris), neonate N16.CNhs11225.1525-43A61.77
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I23.98
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.32
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.78
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.36
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.73
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C61.16
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G82.34
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E22.80
forelimb, embryo E12.CNhs10600.359-14H22.08
forelimb, embryo E13.CNhs10589.384-1E22.99
forelimb, embryo E14.CNhs10577.413-26A83.95
forelimb, embryo E15.CNhs11007.437-20E74.73
forelimb, embryo E17.CNhs10598.1517-43C44.53
forelimb, embryo E18.CNhs11008.1520-43B53.09
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F52.58
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I52.35
intestine, embryo E13.CNhs11010.381-16D53.72
intestine, embryo E15.CNhs10602.976-16D82.06
intestine, embryo E16.CNhs10585.463-22H42.82
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F22.19
intestine, neonate N10.CNhs11098.755-23A52.53
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G12.99
kidney, embryo E14.CNhs10606.411-4I94.74
kidney, embryo E15.CNhs10997.434-16F82.97
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G71.82
kidney, neonate N10.CNhs11206.758-6D52.59
kidney, neonate N20.CNhs11113.832-19I12.07
kidney, neonate N25.CNhs11122.1353-25F32.04
kidney, neonate N30.CNhs11203.1385-42H11.85
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H62.56
liver, embryo E14.CNhs10594.409-16E11.80
liver, embryo E15.CNhs10520.433-16D72.23
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B12.96
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F83.26
lung, embryo E15.CNhs11020.432-17C53.39
lung, embryo E16.CNhs10998.458-17B63.99
lung, embryo E17.CNhs10605.480-44A62.35
lung, embryo E18.CNhs10583.1287-20I64.05
lung, neonate N00.CNhs11224.640-42C64.68
lung, neonate N06.CNhs11212.683-20E52.84
lung, neonate N07.CNhs11111.715-19A34.43
lung, neonate N10.CNhs11219.750-23E65.42
lung, neonate N20.CNhs11109.822-18A42.79
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H23.04
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H23.59
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I72.55
ovary, embryo E18.CNhs11040.505-44H75.52
ovary, neonate N00.CNhs11217.1299-22I43.42
oviduct, adult pregnant day01.CNhs10500.988-6G63.63
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F43.16
pancreas, embryo E15.CNhs11042.1556-45F23.33
pancreas, embryo E16.CNhs11003.460-26E53.21
pancreas, embryo E17.CNhs10599.1558-45G33.54
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D73.64
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E62.52
pituitary gland, embryo E13.CNhs11009.370-44C72.59
pituitary gland, embryo E14.CNhs11037.398-44A52.57
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F62.85
pituitary gland, embryo E17.CNhs11039.1265-44F53.46
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C32.80
skin, neonate N00.CNhs11124.650-25G44.68
skin, neonate N03.CNhs11215.662-22H33.86
skin, neonate N06.CNhs11097.693-20I55.13
skin, neonate N10.CNhs11108.762-6C44.43
small intestine, neonate N16.CNhs11114.790-21I13.50
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C13.71
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H11.50
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.24
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E33.01
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D43.13
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B82.02
stomach, neonate N07.CNhs11210.718-18A93.14
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I12.20
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F53.89
testis, embryo E15.CNhs11034.443-27C52.15
testis, embryo E16.CNhs11033.470-26G53.31
testis, embryo E17.CNhs11029.486-18I53.10
testis, embryo E18.CNhs11027.503-18G54.73
testis, neonate N00.CNhs11189.1300-22B71.53
testis, neonate N07.CNhs11222.726-26I43.78
testis, neonate N10.CNhs11204.763-44D92.20
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I45.88
thymus, embryo E15.CNhs11005.430-45I24.72
thymus, embryo E16.CNhs11002.456-26C55.07
thymus, embryo E17.CNhs10581.478-18C15.19
thymus, embryo E18.CNhs10595.1273-19G43.18
thymus, neonate N02.CNhs11181.1541-43F82.40
thymus, neonate N03.CNhs11137.2104-43C72.36
thymus, neonate N06.CNhs11197.681-26C42.73
thymus, neonate N07.CNhs11211.713-19D34.19
thymus, neonate N10.CNhs11194.748-24E42.82
thymus, neonate N20.CNhs11186.820-7A22.44
thymus, neonate N25.CNhs11125.1362-25G72.21
thymus, neonate N30.CNhs11132.1393-42G22.22
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E43.09
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E53.66
vagina, adult.CNhs10502.89-27D54.07
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.76
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D24.13
whole body, embryo E14.CNhs10519.395-14B13.35
whole body, embryo E16.CNhs10514.453-14F22.94
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.92
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.71
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.99
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.32
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B33.98
whole body, neonate N00.CNhs10525.657-19C24.94
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D13.31
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:106134144..106134174,-&oldid=739062"