FFCP PHASE1:Mm9::chr13:23654245..23654261,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr13:23654245..23654261,- to FFCP PHASE1:Mm9::chr13:23654245..23654261,-: NSchange) |
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{{FFCP | {{FFCP | ||
|EntrezGene=15077,260423,319148,319149,319150,319151,319154,97114 | |EntrezGene=15077,260423,319148,319149,319150,319151,319154,97114 | ||
|HGNC= | |HGNC= | ||
|UniProt=P84228 | |UniProt=P84228 | ||
|association_with_transcript=-7bp_to_ENSMUST00000105107_5end | |||
|description=CAGE_peak_1_at_Hist1h3c_5end,CAGE_peak_1_at_Hist1h3d_5end,CAGE_peak_1_at_Hist1h3e_5end,CAGE_peak_1_at_Hist1h3f_5end,CAGE_peak_1_at_Hist2h3b_5end,CAGE_peak_1_at_Hist2h3c1_5end,CAGE_peak_1_at_Hist2h3c2-ps_5end,CAGE_peak_2_at_Hist1h3b_5end | |||
|id=chr13:23654245..23654261,- | |||
|ontology_enrichment_disease= | |||
|phase1_expression=723.072044678145,249.866391869783,246.609587749129,145.787749849892,224.90218274591,616.620565732371,562.30562591343,185.033722491779,77.9969520720234,72.560003159818,48.6259029760434,29.2763823512885,172.227934310793,139.610382663139,4365.07031883244,4492.92618338024,8498.97725737885,508.3672794748,440.000217440816,1204.41783180281,92.8672728449682,2585.43707831985,1986.4243964016,437.099299071587,626.975565156576,493.839489138917,554.821451052888,398.621780468895,535.676019447518,685.773983076772,1067.41067829464,15454.741499987,16249.3966231968,12916.2570027583,1305.89817289551,2158.05816604395,1608.65035799121,2956.92597115625,5774.06819603088,2328.11008945148,1732.34173225134,2635.18948096968,1475.46596286168,170.338394720956,137.974003389759,178.590989853316,899.750046000245,1104.51544222334,253.51785487558,229.038421109506,557.145958068943,667.011898653468,593.279295020156,227.038350449551,141.495489438977,202.977695032362,169.914329883683,170.687462543833,602.903053361601,476.09188134483,712.426497540945,620.085493686512,934.648830712807,269.96991518442,377.746950500584,396.447904139924,719.639465465208,800.71094829012,877.93994741588,910.750059985585,1314.53100844614,337.639463565296,319.817647297936,1798.53240487317,1483.59204589128,1154.53879598219,71.5753226496027,45.0736303440713,43.0098293117482,480.461746201096,303.647489116398,524.038850780101,56.394965798279,103.548320245829,79.3022905961644,393.62379019282,228.079432640163,360.869327117782,65.2759786532047,424.258738439494,244.065899486813,182.409861920054,18.3592260101093,85.2731042787751,128.005954237191,60.4836297581403,242.266624727272,503.451172895583,821.703132558874,737.41969200308,849.990038352267,109.07750580217,45.8649431471962,63.9960032837998,1636.45577900377,1261.22541033504,1249.65642807654,195.482802079031,183.328021622198,57.2986656790224,1803.37997173398,1286.67111134711,942.294921788255,557.673770044703,410.502176610745,152.307908691567,52.1581381919529,59.5749350510036,974.840828248761,595.463774656413,1170.23920632163,1506.99228674427,152.84124419886,30.1564220921894,50.6861030488561,385.484696309764,7039.97727059436,10632.6760041272,5254.60802992537,43.8886573456131,74.1150976566175,354.596581662503,52.1472960576829,68.2760271071982,60.466320966832,78.5247713247947,858.403997894316,1054.84670380298,208.496275707782,66.7100683160123,2089.34395265213,3182.53483167257,1700.86687814133,1770.32949511614,1598.65362055875,1879.55639029903,1728.14090605508,151.341471882324,2449.06796771002,1371.39729337703,1079.1082444975,1216.31711924061,1116.08165839155,417.9025998266,516.718944520346,1554.05955531879,6845.17414992941,6352.11839131251,4607.99530619893,799.919733532108,1088.66997043225,859.076095230502,549.958020764443,694.774502300083,684.483179881297,538.083548152444,463.039890815743,459.354856872445,353.803677313983,238.699492771004,75.5561304967375,64.1817944797209,115.922460873675,129.374987684998,43.1094394556461,246.147832811248,69.0575256436138,457.235029761268,2071.45548919819,1602.43303583703,852.458256645647,558.461679682035,574.624865295145,578.095677756067,476.901706852234,465.933342914227,625.07066428627,555.884382882975,416.63825417356,408.064011529017,457.996527684477,341.726424904494,1857.03841823162,1729.15123834825,1102.28165488273,1242.68040251211,1003.12226363096,672.181697828813,349.192158000149,76.3144465054543,114.138075140679,148.323391034004,92.1967670241033,1691.80937196119,1935.71298387482,1847.69197746634,2362.5089736905,2130.55902925285,2694.70538940277,1383.8184211384,1623.94643137875,1707.49742861668,422.678527190422,621.847523554069,333.568272559465,189.939316216228,174.553683356821,94.0764866658566,138.19538624462,2490.10664207594,1367.43911732504,2173.58582335128,1807.58429231804,629.656021723785,371.824167063953,178.15702049417,464.077864248626,504.496563019909,207.610108792048,112.737960524428,148.336399422804,210.753678353262,37.6978209848181,75.0589843669819,149.988103270806,159.76737611044,29.0596567877903,42.7822656061542,877.871632492097,140.626306452836,1042.75466517073,929.634650170296,706.58874456358,539.591545776863,458.519671261567,468.208581924729,558.638768311354,391.915105459069,373.546950159465,89.0060046488405,181.541368981376,1291.68788900227,787.232674555833,119.603339155088,110.178464822169,2629.79985083076,1956.94038423283,1077.87803080496,689.529919876604,418.111801203741,385.05815682065,624.914480971832,629.574370227418,263.574656118471,220.324891921747,186.675333279218,99.0679252743523,1889.38105967054,1958.10239641955,1325.24588760034,522.444328310138,509.778080706718,592.211925147033,1449.55762273461,398.941903708308,125.404585951382,117.76216456135,119.377647129632,384.931193243039,466.641100169142,665.023328441473,486.513626844362,389.418397737481,29.8534736236921,2233.28241202793,1392.2858112799,1646.19415378937,5391.10523947426,2945.76060738809,3337.64476890996,2536.92806765829,3030.78865152114,3212.73479103144,8.59203556213602,1518.8872731798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|phase1_expression=723.072044678145,249.866391869783,246.609587749129,145.787749849892,224.90218274591,616.620565732371,562.30562591343,185.033722491779,77.9969520720234,72.560003159818,48.6259029760434,29.2763823512885,172.227934310793,139.610382663139,4365.07031883244,4492.92618338024,8498.97725737885,508.3672794748,440.000217440816,1204.41783180281,92.8672728449682,2585.43707831985,1986.4243964016,437.099299071587,626.975565156576,493.839489138917,554.821451052888,398.621780468895,535.676019447518,685.773983076772,1067.41067829464,15454.741499987,16249.3966231968,12916.2570027583,1305.89817289551,2158.05816604395,1608.65035799121,2956.92597115625,5774.06819603088,2328.11008945148,1732.34173225134,2635.18948096968,1475.46596286168,170.338394720956,137.974003389759,178.590989853316,899.750046000245,1104.51544222334,253.51785487558,229.038421109506,557.145958068943,667.011898653468,593.279295020156,227.038350449551,141.495489438977,202.977695032362,169.914329883683,170.687462543833,602.903053361601,476.09188134483,712.426497540945,620.085493686512,934.648830712807,269.96991518442,377.746950500584,396.447904139924,719.639465465208,800.71094829012,877.93994741588,910.750059985585,1314.53100844614,337.639463565296,319.817647297936,1798.53240487317,1483.59204589128,1154.53879598219,71.5753226496027,45.0736303440713,43.0098293117482,480.461746201096,303.647489116398,524.038850780101,56.394965798279,103.548320245829,79.3022905961644,393.62379019282,228.079432640163,360.869327117782,65.2759786532047,424.258738439494,244.065899486813,182.409861920054,18.3592260101093,85.2731042787751,128.005954237191,60.4836297581403,242.266624727272,503.451172895583,821.703132558874,737.41969200308,849.990038352267,109.07750580217,45.8649431471962,63.9960032837998,1636.45577900377,1261.22541033504,1249.65642807654,195.482802079031,183.328021622198,57.2986656790224,1803.37997173398,1286.67111134711,942.294921788255,557.673770044703,410.502176610745,152.307908691567,52.1581381919529,59.5749350510036,974.840828248761,595.463774656413,1170.23920632163,1506.99228674427,152.84124419886,30.1564220921894,50.6861030488561,385.484696309764,7039.97727059436,10632.6760041272,5254.60802992537,43.8886573456131,74.1150976566175,354.596581662503,52.1472960576829,68.2760271071982,60.466320966832,78.5247713247947,858.403997894316,1054.84670380298,208.496275707782,66.7100683160123,2089.34395265213,3182.53483167257,1700.86687814133,1770.32949511614,1598.65362055875,1879.55639029903,1728.14090605508,151.341471882324,2449.06796771002,1371.39729337703,1079.1082444975,1216.31711924061,1116.08165839155,417.9025998266,516.718944520346,1554.05955531879,6845.17414992941,6352.11839131251,4607.99530619893,799.919733532108,1088.66997043225,859.076095230502,549.958020764443,694.774502300083,684.483179881297,538.083548152444,463.039890815743,459.354856872445,353.803677313983,238.699492771004,75.5561304967375,64.1817944797209,115.922460873675,129.374987684998,43.1094394556461,246.147832811248,69.0575256436138,457.235029761268,2071.45548919819,1602.43303583703,852.458256645647,558.461679682035,574.624865295145,578.095677756067,476.901706852234,465.933342914227,625.07066428627,555.884382882975,416.63825417356,408.064011529017,457.996527684477,341.726424904494,1857.03841823162,1729.15123834825,1102.28165488273,1242.68040251211,1003.12226363096,672.181697828813,349.192158000149,76.3144465054543,114.138075140679,148.323391034004,92.1967670241033,1691.80937196119,1935.71298387482,1847.69197746634,2362.5089736905,2130.55902925285,2694.70538940277,1383.8184211384,1623.94643137875,1707.49742861668,422.678527190422,621.847523554069,333.568272559465,189.939316216228,174.553683356821,94.0764866658566,138.19538624462,2490.10664207594,1367.43911732504,2173.58582335128,1807.58429231804,629.656021723785,371.824167063953,178.15702049417,464.077864248626,504.496563019909,207.610108792048,112.737960524428,148.336399422804,210.753678353262,37.6978209848181,75.0589843669819,149.988103270806,159.76737611044,29.0596567877903,42.7822656061542,877.871632492097,140.626306452836,1042.75466517073,929.634650170296,706.58874456358,539.591545776863,458.519671261567,468.208581924729,558.638768311354,391.915105459069,373.546950159465,89.0060046488405,181.541368981376,1291.68788900227,787.232674555833,119.603339155088,110.178464822169,2629.79985083076,1956.94038423283,1077.87803080496,689.529919876604,418.111801203741,385.05815682065,624.914480971832,629.574370227418,263.574656118471,220.324891921747,186.675333279218,99.0679252743523,1889.38105967054,1958.10239641955,1325.24588760034,522.444328310138,509.778080706718,592.211925147033,1449.55762273461,398.941903708308,125.404585951382,117.76216456135,119.377647129632,384.931193243039,466.641100169142,665.023328441473,486.513626844362,389.418397737481,29.8534736236921,2233.28241202793,1392.2858112799,1646.19415378937,5391.10523947426,2945.76060738809,3337.64476890996,2536.92806765829,3030.78865152114,3212.73479103144,8.59203556213602,1518.8872731798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| ||
|short_description=p1@Hist1h3c,p1@Hist1h3d,p1@Hist1h3e,p1@Hist1h3f,p1@Hist2h3b,p1@Hist2h3c1,p1@Hist2h3c2-ps,p2@Hist1h3b | |||
}} | }} | ||
Revision as of 19:32, 17 April 2012
| Short description: | p1@Hist1h3c, p1@Hist1h3d, p1@Hist1h3e, p1@Hist1h3f, p1@Hist2h3b, p1@Hist2h3c1, p1@Hist2h3c2-ps, p2@Hist1h3b |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Hist1h3c_5end, CAGE_peak_1_at_Hist1h3d_5end, CAGE_peak_1_at_Hist1h3e_5end, CAGE_peak_1_at_Hist1h3f_5end, CAGE_peak_1_at_Hist2h3b_5end, CAGE_peak_1_at_Hist2h3c1_5end, CAGE_peak_1_at_Hist2h3c2-ps_5end, CAGE_peak_2_at_Hist1h3b_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -7bp_to_ENSMUST00000105107_5end |
| EntrezGene: | 15077,260423,319148,319149,319150,319151,319154,97114 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|
| Ontology term | p-value | n |
|---|
| Ontology term | p-value | n |
|---|
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
