Personal tools

FFCP PHASE1:Mm9::chr16:56037841..56037923,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr16:56037841..56037923,-
|short_description=p1@Rg9mtd1
|description=CAGE_peak_1_at_Rg9mtd1_5end
|association_with_transcript=0bp_to_NM_029092,uc007zmd.1_5end
|EntrezGene=52575
|EntrezGene=52575
|HGNC=
|HGNC=
|UniProt=Q3UFY8
|UniProt=Q3UFY8
|association_with_transcript=0bp_to_NM_029092,uc007zmd.1_5end
|description=CAGE_peak_1_at_Rg9mtd1_5end
|id=chr16:56037841..56037923,-
|ontology_enrichment_disease=
|phase1_expression=18.7374151112609,11.8651638597383,7.73498706962211,4.83942738090928,7.51343594919521,22.831580980017,21.0251376535973,34.734174005784,112.771766443485,94.5620686340854,71.5691107182611,72.5128925267608,37.1505583950716,38.8146586740348,23.3176833270964,24.0945568193893,16.7894850750755,41.16781257925,38.8033847104241,23.3414308488917,11.9060606211498,31.0780677258771,32.388773853228,17.2791816616879,19.9586074528438,12.0588712464154,17.6612418425221,20.9007095705312,12.3515222646643,21.4225610295941,18.181901873735,15.2407361630311,14.7615549020297,0,30.3294200738838,39.3976109499627,28.5837098767317,20.0895182753716,25.7840663692854,15.1821885752402,12.3528612486513,15.7100461540443,26.7030694167134,16.366586336825,15.3079166141467,17.9875817118448,4.69434806608824,1.30815093828268,2.19686182734472,3.11087838518853,2.51975558925653,0,45.9724340598198,53.6767985088395,46.0448504825176,14.1492689819771,10.8882707176728,12.8918023069361,9.71119012126069,6.34789175126439,5.07065122804943,4.06613438482959,0.889294796111139,3.5995988691256,2.96659908770092,3.5524005747305,1.19840044207362,4.61061966385865,12.4427534770173,7.83034442323806,9.46462326081219,3.71346279724945,5.74258206474195,13.1065155160001,7.57179221044067,11.9498442259303,8.8092704799511,11.4918604276669,11.6740965274745,6.85808696197008,6.49562269577109,6.25096044668112,9.21303896704557,14.6318278608237,12.835052813252,13.258286346315,12.9558229527184,11.5567656411686,36.0456680265956,17.8348881852014,14.7830889237856,30.1148356943485,84.9964167134688,23.2072372404261,22.7421746106684,34.4980703064948,30.4764391685902,19.0881961287425,12.9893002301434,11.3068663843309,16.760366953425,16.6824420638613,20.3844191765317,21.3320010945999,20.9996309780878,23.055747758234,23.7596489156948,27.6324988920125,31.5904218049549,30.2821963692243,21.8591511725331,19.7902560902892,21.6778567420695,25.4721262533932,21.6363221129697,24.5049853092867,13.3485282576562,37.8850315130169,30.0767587662957,21.5149910430054,20.5382612168166,23.7588874036259,24.2309289583559,15.8101630386235,18.2218634927706,21.2029355823131,26.1196971422906,20.9965955847693,22.9997111002247,16.027598416316,14.640019290196,18.4711897605911,15.4703644971126,13.5529192385075,15.584103341967,16.5486088329113,18.7384429484582,17.7901967972433,14.6579199891531,17.6771158944638,21.7301139747715,25.5191335921155,19.2666478891724,18.3859877759572,17.9616357759506,19.0889443224426,14.6174690313177,15.0047955028629,15.3053274982318,20.6125627382923,20.762232651346,21.7003775103299,15.8486932058591,19.5021213252413,19.1377386859387,18.9082553477569,16.8531164955176,22.1319200118655,29.8371674365372,26.5120988845442,20.6382932783365,19.0865785148676,17.992599904476,21.447301260467,18.5120535464854,23.2533944750408,21.7301455133692,24.4039565547384,27.1523752357243,26.7592966448925,25.6988126260363,29.3861974724918,26.7851140655082,29.6596185460422,12.4071069652835,20.992540925374,7.59963200862735,21.9493970330742,27.7274725695804,25.7782705765087,21.0053961955012,20.1683524623343,17.5678654637448,18.6421113590308,14.7104009078799,19.5991756121573,18.8501406600202,17.110256595539,13.062593836981,17.0775687644302,15.9942156907274,18.9184209591649,11.7594098590911,19.1937501184344,19.1603150644237,21.1797380959127,20.3650111526007,17.4638191526893,20.6151111025079,22.4367424928995,25.5907926381441,21.4711065223933,41.799820419288,29.3647386060326,28.8941722816408,26.3088671490279,23.1260538382893,21.9471215374699,27.7542178441748,21.0018180339092,20.2669033468794,29.6526326243128,35.9420516318386,27.9105710751378,34.9482193888308,35.6136217905428,33.0091240880318,28.946611281802,19.3990849674935,24.8233749419335,23.1410266547677,15.4468028055421,15.7242466353296,16.9181320016234,16.1869675802489,14.6350235893349,18.128041572212,12.8449519996289,23.9182152986231,13.6006551214063,20.8948828057734,20.1062191428301,18.0949540727127,15.2293591469239,16.7199852826472,26.4899276452543,13.9679013289379,17.1129062424617,17.5410391553043,29.791569410116,17.0374438484779,20.6932534477218,15.9413314322271,12.6653462914853,17.6010952525091,17.2676683781188,20.2405350837447,17.5353514746787,16.602086673754,16.3873871375122,19.5877317587411,10.8620018237026,19.8722090411363,20.7862354945395,26.5490276679926,17.7229864393136,19.6510312027088,22.255399411196,10.0402643579463,20.9055900601871,21.4495483329624,17.4496190149203,18.1813662976208,24.6508671189936,20.0295356292498,27.8465966770104,17.0219802876894,19.8067203434441,5.56242340265844,16.289614662401,16.847322196016,15.6964559489822,15.9612549984057,8.82948352432338,23.2324990983073,22.2423674407011,17.8628002424519,19.1268053412117,17.4381580831578,23.5220407219808,18.9802026964987,21.8307396660931,23.0269860937582,13.1651964427462,22.7258271461144,17.9556575128004,22.7789268664745,20.5321618135113,23.2380187125743,27.9109371311958,26.5166350790414,31.908931129794,26.1197950490361,22.9120948323627,22.4598555442606,18.2987520414164,20.5210147561422,20.6997413054324,17.6873676634404,21.4434310751865,19.7541759183553,17.799404054914,22.4233903794802,19.2615187056947,10.7101658349996,23.7731308209926,16.876766026624,17.3061557626202,16.1449779347164,25.0055065726352,19.9507305697782,22.1347454234715,25.7953987287249,18.6019773036025,16.7057403629562,28.7570119771642,16.2180172232131,18.5906832468337,25.8542437725812,23.4524971324401,30.9942913458773,26.4429988943931,27.4702520544714,27.361907935948,27.9678980423849,31.7602483181048,28.5551590567475,32.6158143160717,27.6998258170318,23.1264991287516,23.7524970110249,37.2312504929324,32.2338463419031,16.4211154927362,18.3928825942158,27.1064403915552,19.9362592543531,14.5455910170255,12.4245405375755,14.2700823317225,10.3121192419091,14.6075204992134,12.3314853558716,14.3524840504043,14.1754725048679,12.6089936902782,18.1256963593682,12.9440077937955,24.1824519871132,24.7395421508639,18.9514302387089,20.9071776678733,19.9132504496583,20.7743164548516,20.4466989577486,18.3371200942616,16.6877988987744,19.96307972934,19.2644267916582,23.0124136491013,20.6011316433741,20.2319481599387,21.538300858355,16.6702791949076,23.1768651889711,20.255468148689,20.6042950401653,21.6382412597564,18.172070376427,22.3619515760765,17.6442780561018,22.6740409946432,23.4332357234173,22.2536418755109,23.0489245819693,20.2563677807139,22.6792870122589,23.567975409625,25.0319888242007,19.9964099222394,18.415396942636,21.6911577660352,15.6254354894725,11.9909077410214,18.7145286756327,19.9830080264917,13.9640482410256,19.6326363016369,24.5779905757647
|phase1_expression=18.7374151112609,11.8651638597383,7.73498706962211,4.83942738090928,7.51343594919521,22.831580980017,21.0251376535973,34.734174005784,112.771766443485,94.5620686340854,71.5691107182611,72.5128925267608,37.1505583950716,38.8146586740348,23.3176833270964,24.0945568193893,16.7894850750755,41.16781257925,38.8033847104241,23.3414308488917,11.9060606211498,31.0780677258771,32.388773853228,17.2791816616879,19.9586074528438,12.0588712464154,17.6612418425221,20.9007095705312,12.3515222646643,21.4225610295941,18.181901873735,15.2407361630311,14.7615549020297,0,30.3294200738838,39.3976109499627,28.5837098767317,20.0895182753716,25.7840663692854,15.1821885752402,12.3528612486513,15.7100461540443,26.7030694167134,16.366586336825,15.3079166141467,17.9875817118448,4.69434806608824,1.30815093828268,2.19686182734472,3.11087838518853,2.51975558925653,0,45.9724340598198,53.6767985088395,46.0448504825176,14.1492689819771,10.8882707176728,12.8918023069361,9.71119012126069,6.34789175126439,5.07065122804943,4.06613438482959,0.889294796111139,3.5995988691256,2.96659908770092,3.5524005747305,1.19840044207362,4.61061966385865,12.4427534770173,7.83034442323806,9.46462326081219,3.71346279724945,5.74258206474195,13.1065155160001,7.57179221044067,11.9498442259303,8.8092704799511,11.4918604276669,11.6740965274745,6.85808696197008,6.49562269577109,6.25096044668112,9.21303896704557,14.6318278608237,12.835052813252,13.258286346315,12.9558229527184,11.5567656411686,36.0456680265956,17.8348881852014,14.7830889237856,30.1148356943485,84.9964167134688,23.2072372404261,22.7421746106684,34.4980703064948,30.4764391685902,19.0881961287425,12.9893002301434,11.3068663843309,16.760366953425,16.6824420638613,20.3844191765317,21.3320010945999,20.9996309780878,23.055747758234,23.7596489156948,27.6324988920125,31.5904218049549,30.2821963692243,21.8591511725331,19.7902560902892,21.6778567420695,25.4721262533932,21.6363221129697,24.5049853092867,13.3485282576562,37.8850315130169,30.0767587662957,21.5149910430054,20.5382612168166,23.7588874036259,24.2309289583559,15.8101630386235,18.2218634927706,21.2029355823131,26.1196971422906,20.9965955847693,22.9997111002247,16.027598416316,14.640019290196,18.4711897605911,15.4703644971126,13.5529192385075,15.584103341967,16.5486088329113,18.7384429484582,17.7901967972433,14.6579199891531,17.6771158944638,21.7301139747715,25.5191335921155,19.2666478891724,18.3859877759572,17.9616357759506,19.0889443224426,14.6174690313177,15.0047955028629,15.3053274982318,20.6125627382923,20.762232651346,21.7003775103299,15.8486932058591,19.5021213252413,19.1377386859387,18.9082553477569,16.8531164955176,22.1319200118655,29.8371674365372,26.5120988845442,20.6382932783365,19.0865785148676,17.992599904476,21.447301260467,18.5120535464854,23.2533944750408,21.7301455133692,24.4039565547384,27.1523752357243,26.7592966448925,25.6988126260363,29.3861974724918,26.7851140655082,29.6596185460422,12.4071069652835,20.992540925374,7.59963200862735,21.9493970330742,27.7274725695804,25.7782705765087,21.0053961955012,20.1683524623343,17.5678654637448,18.6421113590308,14.7104009078799,19.5991756121573,18.8501406600202,17.110256595539,13.062593836981,17.0775687644302,15.9942156907274,18.9184209591649,11.7594098590911,19.1937501184344,19.1603150644237,21.1797380959127,20.3650111526007,17.4638191526893,20.6151111025079,22.4367424928995,25.5907926381441,21.4711065223933,41.799820419288,29.3647386060326,28.8941722816408,26.3088671490279,23.1260538382893,21.9471215374699,27.7542178441748,21.0018180339092,20.2669033468794,29.6526326243128,35.9420516318386,27.9105710751378,34.9482193888308,35.6136217905428,33.0091240880318,28.946611281802,19.3990849674935,24.8233749419335,23.1410266547677,15.4468028055421,15.7242466353296,16.9181320016234,16.1869675802489,14.6350235893349,18.128041572212,12.8449519996289,23.9182152986231,13.6006551214063,20.8948828057734,20.1062191428301,18.0949540727127,15.2293591469239,16.7199852826472,26.4899276452543,13.9679013289379,17.1129062424617,17.5410391553043,29.791569410116,17.0374438484779,20.6932534477218,15.9413314322271,12.6653462914853,17.6010952525091,17.2676683781188,20.2405350837447,17.5353514746787,16.602086673754,16.3873871375122,19.5877317587411,10.8620018237026,19.8722090411363,20.7862354945395,26.5490276679926,17.7229864393136,19.6510312027088,22.255399411196,10.0402643579463,20.9055900601871,21.4495483329624,17.4496190149203,18.1813662976208,24.6508671189936,20.0295356292498,27.8465966770104,17.0219802876894,19.8067203434441,5.56242340265844,16.289614662401,16.847322196016,15.6964559489822,15.9612549984057,8.82948352432338,23.2324990983073,22.2423674407011,17.8628002424519,19.1268053412117,17.4381580831578,23.5220407219808,18.9802026964987,21.8307396660931,23.0269860937582,13.1651964427462,22.7258271461144,17.9556575128004,22.7789268664745,20.5321618135113,23.2380187125743,27.9109371311958,26.5166350790414,31.908931129794,26.1197950490361,22.9120948323627,22.4598555442606,18.2987520414164,20.5210147561422,20.6997413054324,17.6873676634404,21.4434310751865,19.7541759183553,17.799404054914,22.4233903794802,19.2615187056947,10.7101658349996,23.7731308209926,16.876766026624,17.3061557626202,16.1449779347164,25.0055065726352,19.9507305697782,22.1347454234715,25.7953987287249,18.6019773036025,16.7057403629562,28.7570119771642,16.2180172232131,18.5906832468337,25.8542437725812,23.4524971324401,30.9942913458773,26.4429988943931,27.4702520544714,27.361907935948,27.9678980423849,31.7602483181048,28.5551590567475,32.6158143160717,27.6998258170318,23.1264991287516,23.7524970110249,37.2312504929324,32.2338463419031,16.4211154927362,18.3928825942158,27.1064403915552,19.9362592543531,14.5455910170255,12.4245405375755,14.2700823317225,10.3121192419091,14.6075204992134,12.3314853558716,14.3524840504043,14.1754725048679,12.6089936902782,18.1256963593682,12.9440077937955,24.1824519871132,24.7395421508639,18.9514302387089,20.9071776678733,19.9132504496583,20.7743164548516,20.4466989577486,18.3371200942616,16.6877988987744,19.96307972934,19.2644267916582,23.0124136491013,20.6011316433741,20.2319481599387,21.538300858355,16.6702791949076,23.1768651889711,20.255468148689,20.6042950401653,21.6382412597564,18.172070376427,22.3619515760765,17.6442780561018,22.6740409946432,23.4332357234173,22.2536418755109,23.0489245819693,20.2563677807139,22.6792870122589,23.567975409625,25.0319888242007,19.9964099222394,18.415396942636,21.6911577660352,15.6254354894725,11.9909077410214,18.7145286756327,19.9830080264917,13.9640482410256,19.6326363016369,24.5779905757647
|short_description=p1@Rg9mtd1
}}
}}

Revision as of 00:46, 18 April 2012

Short description:p1@Rg9mtd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rg9mtd1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_NM_029092, uc007zmd.1_5end
EntrezGene:Rg9mtd1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rg9mtd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G718.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I511.87
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I67.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.84
CD326+ enterocyte, pool2.CNhs13197.11849-124I47.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I722.83
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I821.03
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E934.73
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7112.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F294.56
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E671.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F172.51
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E437.15
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E838.81
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A123.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A324.09
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A516.79
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A241.17
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A438.80
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A623.34
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H231.08
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I932.39
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D117.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D219.96
GP2+ M cell, pool1.CNhs13228.11845-124H912.06
GP2+ M cell, pool2.CNhs13231.11846-124I117.66
GP2+ M cell, pool3.CNhs13240.11847-124I220.90
Ileum epithelium, pool1.CNhs13199.10252-104B912.35
Ileum epithelium, pool2.CNhs13232.10253-104C121.42
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C818.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I315.24
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G614.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F530.33
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F639.40
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F728.58
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G820.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H125.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H315.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G912.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H215.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H426.70
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D816.37
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D915.31
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B317.99
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.52
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A245.97
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I953.68
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A146.04
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C114.15
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.89
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C512.89
Mouse Granule cells, donor1.CNhs12131.11713-123C39.71
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.07
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E84.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D512.44
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.83
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.46
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.74
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D213.11
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.57
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.95
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.49
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.67
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.86
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.50
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.21
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.84
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.26
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.96
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.56
Mouse Schwann, donor1.CNhs12507.11728-123D936.05
Mouse Schwann, donor2.CNhs12573.11746-123F917.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G314.78
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F730.11
Mouse hepatocyte, donor1.CNhs13078.11714-123C485.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C823.21
Mouse hepatocyte, donor6.CNhs13090.11822-124F422.74
Mouse hepatocyte, donor8.CNhs13091.11824-124F634.50
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A730.48
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I719.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E312.99
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I811.31
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G616.76
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H116.68
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G121.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G223.06
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G323.76
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B627.63
accessory axillary lymph node, adult.CNhs10475.1063-29H931.59
adrenal gland, adult.CNhs10508.49-24D730.28
adrenal gland, embryo E14.CNhs11038.406-44C521.86
adrenal gland, embryo E16.CNhs11004.1254-43D619.79
adrenal gland, embryo E17.CNhs11043.1263-45I121.68
adrenal gland, embryo E18.CNhs11026.1262-18F525.47
adrenal gland, neonate N00.CNhs11191.1311-23C121.64
adrenal gland, neonate N25.CNhs11223.1377-27I324.50
amnion, adult pregnant day17.5.CNhs10488.583-22A813.35
aorta, adult.CNhs10498.46-23H137.89
bone (os femoris), adult.CNhs10483.56-12G230.08
bone (os femoris), neonate N02.CNhs11227.1985-43F521.51
bone (os femoris), neonate N16.CNhs11225.1525-43A620.54
bone (os femoris), neonate N20.CNhs11195.1350-25C323.76
cecum, adult.CNhs10467.37-13H424.23
cerebellum, adult.CNhs10494.15-8B215.81
cerebellum, neonate N30.CNhs11135.1395-42I218.22
colon, adult.CNhs10468.36-18H721.20
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C726.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D121.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D423.00
corpora quadrigemina, adult.CNhs10501.16-22A416.03
corpus striatum, adult.CNhs10487.19-21D814.64
corpus striatum, neonate N00.CNhs11226.630-43F118.47
cortex, adult.CNhs10473.12-14D515.47
cortex, neonate N30.CNhs11107.1392-42F213.55
diencephalon, adult.CNhs10482.20-12F215.58
diencephalon, neonate N30.CNhs11201.1388-42B216.55
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B118.74
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A217.79
epididymis, adult.CNhs10490.58-23B214.66
eyeball, adult.CNhs10484.31-12G417.68
eyeball, embryo E12.CNhs11016.345-16C621.73
eyeball, embryo E14.CNhs10521.399-16E225.52
eyeball, embryo E15.CNhs10593.426-16C919.27
eyeball, embryo E17.CNhs11023.1261-18D418.39
eyeball, neonate N00.CNhs11207.633-15C617.96
eyeball, neonate N01.CNhs11140.1532-43E719.09
eyeball, neonate N02.CNhs11205.1551-44G814.62
eyeball, neonate N16.CNhs11188.777-19A215.00
forelimb, embryo E11.CNhs10596.335-25E215.31
forelimb, embryo E12.CNhs10600.359-14H220.61
forelimb, embryo E13.CNhs10589.384-1E220.76
forelimb, embryo E14.CNhs10577.413-26A821.70
forelimb, embryo E15.CNhs11007.437-20E715.85
forelimb, embryo E17.CNhs10598.1517-43C419.50
forelimb, embryo E18.CNhs11008.1520-43B519.14
gonad, embryo E13.CNhs11044.1564-45I618.91
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C816.85
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D222.13
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D529.84
heart, embryo E11.CNhs10586.331-24E926.51
heart, embryo E12.CNhs11015.353-12F520.64
heart, embryo E13.CNhs11013.376-3I919.09
heart, embryo E14.CNhs10597.403-26D417.99
heart, embryo E15.CNhs11017.431-16C821.45
heart, embryo E16.CNhs11021.457-17C618.51
heart, embryo E17.CNhs11025.479-18E523.25
heart, embryo E18.CNhs11030.1283-20G321.73
heart, neonate N00.CNhs11213.639-21E324.40
heart, neonate N03.CNhs11221.1349-25I227.15
heart, neonate N10.CNhs11118.749-24G126.76
heart, neonate N16.CNhs11209.782-15G125.70
heart, neonate N20.CNhs11127.821-26I629.39
heart, neonate N25.CNhs11196.1351-25D326.79
heart, neonate N30.CNhs11202.1390-42D229.66
hippocampus, adult.CNhs10478.13-16E812.41
hippocampus, neonate N00.CNhs11228.627-43G120.99
intestinal mucosa, adult.CNhs10506.860-29I37.60
intestine, adult.CNhs10496.178-9A321.95
intestine, embryo E12.CNhs11019.1251-16I527.73
intestine, embryo E13.CNhs11010.381-16D525.78
intestine, embryo E15.CNhs10602.976-16D821.01
intestine, embryo E16.CNhs10585.463-22H420.17
intestine, embryo E17.CNhs10582.482-18D317.57
intestine, embryo E18.CNhs10526.1289-20F718.64
intestine, neonate N00.CNhs11126.644-26D114.71
intestine, neonate N01.CNhs11192.1322-23E919.60
intestine, neonate N06.CNhs11102.688-20B818.85
intestine, neonate N07.CNhs11095.720-20F217.11
intestine, neonate N10.CNhs11098.755-23A513.06
intestine, neonate N20.CNhs11187.827-18D117.08
intestine, neonate N25.CNhs11121.1352-25E315.99
intestine, neonate N30.CNhs11131.1384-42G118.92
kidney, embryo E14.CNhs10606.411-4I911.76
kidney, embryo E15.CNhs10997.434-16F819.19
kidney, embryo E16.CNhs10584.464-22A519.16
kidney, embryo E17.CNhs11028.483-18I221.18
kidney, embryo E18.CNhs11001.1288-20C720.37
kidney, neonate N00.CNhs11214.646-21G717.46
kidney, neonate N10.CNhs11206.758-6D520.62
kidney, neonate N20.CNhs11113.832-19I122.44
kidney, neonate N25.CNhs11122.1353-25F325.59
kidney, neonate N30.CNhs11203.1385-42H121.47
liver, adult pregnant day01.CNhs10466.508-5B241.80
liver, embryo E12.CNhs10601.355-15F829.36
liver, embryo E13.CNhs10524.378-3H628.89
liver, embryo E14.CNhs10594.409-16E126.31
liver, embryo E15.CNhs10520.433-16D723.13
liver, embryo E16.CNhs10523.462-17F521.95
liver, embryo E17.CNhs10510.481-18A327.75
liver, embryo E18.CNhs10579.499-43G421.00
liver, neonate N00.CNhs11117.641-24F420.27
liver, neonate N03.CNhs11123.1345-25G229.65
liver, neonate N06.CNhs11101.684-20A835.94
liver, neonate N07.CNhs11103.716-20H227.91
liver, neonate N10.CNhs11115.751-24B934.95
liver, neonate N20.CNhs11220.823-25A335.61
liver, neonate N25.CNhs11198.1368-26H133.01
liver, neonate N30.CNhs11106.1382-42D128.95
lung, adult.CNhs10474.28-22B119.40
lung, embryo E12.CNhs10522.354-16G224.82
lung, embryo E14.CNhs10604.404-26F823.14
lung, embryo E15.CNhs11020.432-17C515.45
lung, embryo E16.CNhs10998.458-17B615.72
lung, embryo E17.CNhs10605.480-44A616.92
lung, embryo E18.CNhs10583.1287-20I616.19
lung, neonate N00.CNhs11224.640-42C614.64
lung, neonate N06.CNhs11212.683-20E518.13
lung, neonate N07.CNhs11111.715-19A312.84
lung, neonate N10.CNhs11219.750-23E623.92
lung, neonate N20.CNhs11109.822-18A413.60
lung, neonate N25.CNhs11119.1359-25C720.89
lung, neonate N30.CNhs11133.1394-42H220.11
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A118.09
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A115.23
mammary gland, adult lactating day02.CNhs10480.595-22B616.72
mammary gland, adult pregnant day19.CNhs10476.588-5H226.49
medulla oblongata, adult.CNhs10477.17-12C213.97
medulla oblongata, neonate N30.CNhs11200.1396-42A317.11
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C717.54
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C229.79
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E117.04
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E220.69
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E315.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D712.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D817.60
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D917.27
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D420.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D517.54
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D616.60
olfactory brain, adult.CNhs10489.18-22I916.39
ovary, adult.CNhs10507.91-2I719.59
ovary, embryo E18.CNhs11040.505-44H710.86
ovary, neonate N00.CNhs11217.1299-22I419.87
oviduct, adult pregnant day01.CNhs10500.988-6G620.79
pancreas, adult.CNhs10486.34-16E426.55
pancreas, embryo E14.CNhs11012.405-44F417.72
pancreas, embryo E15.CNhs11042.1556-45F219.65
pancreas, embryo E16.CNhs11003.460-26E522.26
pancreas, embryo E17.CNhs10599.1558-45G310.04
pancreas, embryo E18.CNhs10580.1535-43I720.91
pancreas, neonate N00.CNhs11105.645-26G921.45
pancreas, neonate N01.CNhs11138.1531-43D717.45
pancreas, neonate N02.CNhs11139.1539-43D818.18
pancreas, neonate N16.CNhs11136.787-43B624.65
pancreas, neonate N25.CNhs11094.1555-45E220.03
pancreas, neonate N30.CNhs11182.1548-44H527.85
pituitary gland, adult.CNhs10493.21-1G817.02
pituitary gland, embryo E12.CNhs11018.346-16E619.81
pituitary gland, embryo E13.CNhs11009.370-44C75.56
pituitary gland, embryo E14.CNhs11037.398-44A516.29
pituitary gland, embryo E15.CNhs10592.427-16B916.85
pituitary gland, embryo E16.CNhs11036.449-43F615.70
pituitary gland, embryo E17.CNhs11039.1265-44F515.96
pituitary gland, neonate N00.CNhs11190.1308-22E98.83
placenta, adult pregnant day10.CNhs10472.539-13I723.23
placenta, adult pregnant day17.CNhs10464.577-18G322.24
prostate, adult.CNhs10470.859-1F817.86
skin, adult.CNhs10492.30-1C319.13
skin, neonate N00.CNhs11124.650-25G417.44
skin, neonate N03.CNhs11215.662-22H323.52
skin, neonate N06.CNhs11097.693-20I518.98
skin, neonate N10.CNhs11108.762-6C421.83
small intestine, neonate N16.CNhs11114.790-21I123.03
spinal cord, adult.CNhs10505.24-13C913.17
spleen, adult.CNhs10465.25-2G222.73
spleen, embryo E16.CNhs11035.461-43C117.96
spleen, embryo E18.CNhs11011.1271-21F222.78
spleen, neonate N10.CNhs11116.752-24D120.53
spleen, neonate N20.CNhs11112.824-19H123.24
spleen, neonate N25.CNhs11099.1354-25G327.91
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C626.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C931.91
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D326.12
stomach, adult.CNhs10503.33-1H622.91
stomach, embryo E12.CNhs10588.356-43E322.46
stomach, embryo E15.CNhs10603.1252-16G818.30
stomach, embryo E16.CNhs11022.459-17D420.52
stomach, embryo E17.CNhs11006.1035-18D520.70
stomach, embryo E18.CNhs10999.1286-20C617.69
stomach, neonate N03.CNhs11193.1340-24B821.44
stomach, neonate N07.CNhs11210.718-18A919.75
stomach, neonate N25.CNhs11104.1355-25E417.80
stomach, neonate N30.CNhs11134.1386-42I122.42
submandibular gland, adult.CNhs10469.59-29C119.26
testis, adult.CNhs10504.57-7G510.71
testis, embryo E13.CNhs11031.389-23F523.77
testis, embryo E15.CNhs11034.443-27C516.88
testis, embryo E16.CNhs11033.470-26G517.31
testis, embryo E17.CNhs11029.486-18I516.14
testis, embryo E18.CNhs11027.503-18G525.01
testis, neonate N00.CNhs11189.1300-22B719.95
testis, neonate N07.CNhs11222.726-26I422.13
testis, neonate N10.CNhs11204.763-44D925.80
testis, neonate N20.CNhs11110.839-18H318.60
testis, neonate N30.CNhs11130.1391-42E216.71
thymus, adult.CNhs10471.38-12B528.76
thymus, embryo E14.CNhs11041.402-44I416.22
thymus, embryo E15.CNhs11005.430-45I218.59
thymus, embryo E16.CNhs11002.456-26C525.85
thymus, embryo E17.CNhs10581.478-18C123.45
thymus, embryo E18.CNhs10595.1273-19G430.99
thymus, neonate N02.CNhs11181.1541-43F826.44
thymus, neonate N03.CNhs11137.2104-43C727.47
thymus, neonate N06.CNhs11197.681-26C427.36
thymus, neonate N07.CNhs11211.713-19D327.97
thymus, neonate N10.CNhs11194.748-24E431.76
thymus, neonate N20.CNhs11186.820-7A228.56
thymus, neonate N25.CNhs11125.1362-25G732.62
thymus, neonate N30.CNhs11132.1393-42G227.70
tongue, adult.CNhs10499.32-1B423.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H323.75
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F737.23
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G532.23
urinary bladder, adult.CNhs10481.879-12E416.42
uterus, adult pregnant day19.CNhs10497.590-15F518.39
uterus, adult.CNhs10509.92-27E527.11
vagina, adult.CNhs10502.89-27D519.94
vesicular gland, adult.CNhs10491.51-27F814.55
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.42
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.27
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.31
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D714.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A412.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A514.35
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.61
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A818.13
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.94
whole body, embryo E11.CNhs11014.324-5I824.18
whole body, embryo E12.CNhs10587.857-27C924.74
whole body, embryo E13.CNhs10512.372-23H218.95
whole body, embryo E14.5.CNhs10578.420-27D220.91
whole body, embryo E14.CNhs10519.395-14B119.91
whole body, embryo E16.CNhs10514.453-14F220.77
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G520.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G518.34
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G516.69
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G519.96
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G519.26
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G523.01
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G520.60
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G520.23
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G521.54
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G516.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G523.18
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G520.26
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G520.60
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G521.64
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G518.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G522.36
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G517.64
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G522.67
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G523.43
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G522.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G523.05
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G520.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G522.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G523.57
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G525.03
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G520.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G518.42
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G521.69
whole body, embryo E17.5.CNhs10513.490-9F915.63
whole body, embryo E17.CNhs10517.475-3I511.99
whole body, embryo E18.CNhs10516.493-3B318.71
whole body, neonate N00.CNhs10525.657-19C219.98
whole body, neonate N01.CNhs10576.659-23C613.96
whole body, neonate N06.CNhs10515.692-21D119.63
whole body, neonate N10.CNhs10518.761-6B424.58





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr16:56037841..56037923,-&oldid=792068"