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FFCP PHASE1:Mm9::chr13:23842938..23842955,+: Difference between revisions

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|description=CAGE_peak_4_at_Hist1h2ab_5end,CAGE_peak_4_at_Hist1h2ac_5end,CAGE_peak_4_at_Hist1h2ad_5end,CAGE_peak_4_at_Hist1h2ae_5end,CAGE_peak_4_at_Hist1h2ag_5end,CAGE_peak_4_at_Hist1h2ah_5end,CAGE_peak_4_at_Hist1h2ai_5end,CAGE_peak_4_at_Hist1h2an_5end,CAGE_peak_4_at_Hist1h2ao_5end,CAGE_peak_4_at_Hist1h2ap_5end
|description=CAGE_peak_4_at_Hist1h2ab_5end,CAGE_peak_4_at_Hist1h2ac_5end,CAGE_peak_4_at_Hist1h2ad_5end,CAGE_peak_4_at_Hist1h2ae_5end,CAGE_peak_4_at_Hist1h2ag_5end,CAGE_peak_4_at_Hist1h2ah_5end,CAGE_peak_4_at_Hist1h2ai_5end,CAGE_peak_4_at_Hist1h2an_5end,CAGE_peak_4_at_Hist1h2ao_5end,CAGE_peak_4_at_Hist1h2ap_5end
|id=chr13:23842938..23842955,+
|id=chr13:23842938..23842955,+
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=320.297694209588,114.46393370571,65.5198904720932,29.9439569193762,68.6227150026496,450.587965811512,396.674263731203,27.7615145399389,3.51971805379167,2.10658073689794,1.71217968225505,0.957265907944037,7.01922992717943,6.11942816932982,3357.74639910188,6442.56053307687,8226.14812490888,297.007628684781,251.467871232925,1172.58860791796,96.4390910313131,1685.96035139103,1616.56549498087,374.222276913778,475.565439652243,274.48287884698,373.470650669918,349.494339416512,438.574052105311,721.814291632442,837.697869255741,10086.8272172328,10941.3875063419,18162.0006443693,1653.9643746958,2386.96327270259,1892.24159383964,4773.77178018517,5849.85772444969,3425.93938056454,3194.09698000841,4986.91508568161,2873.25026923837,86.9947012211239,66.401889948782,74.5199813776427,373.200671254015,590.194098321869,82.3823185254269,51.5239232546851,278.572979034471,324.880795464836,119.796780725224,62.3811442129756,44.7004752859477,201.691397852182,98.2809698989936,33.0030139057563,198.472448103265,140.711600486361,232.616125086768,309.365057779118,402.850542638346,139.934406037258,232.383595203239,194.671551495231,457.489368761604,462.983057912473,687.876888054441,685.020131094998,871.586639840127,122.829923293636,165.65140571371,1170.03211410124,1346.62886780622,720.667528702256,15.4162233399144,8.04430229936683,7.0659005297872,137.689284390322,112.804264561771,170.338672172061,8.09630697104005,12.9435400307286,11.3070703354839,247.782640383355,127.707397676795,91.8949267918732,27.9429653399449,240.317561139578,46.9580471696718,37.858650587181,0.679971333707751,10.2543606411185,17.5439632710871,8.06448396775204,380.885267397311,676.267519989733,947.959130795868,769.220253709011,329.855289116986,132.176271736747,5.09610479413291,21.3320010945999,1779.77284815319,1392.97254038209,1420.52369049154,226.540817362615,141.639022355003,15.289540323677,1184.55781115918,1047.66571087208,613.437222701116,400.319333307766,221.654712950804,87.0869477914651,20.2699873542187,22.1237016087465,684.688567209203,486.918218341702,1269.83873114726,1959.86577317257,307.546406009902,1.75668478206928,2.30391377494801,214.583926375217,8644.54141797764,7299.61643072778,6640.81713706543,4.04434726393021,6.8625090422794,137.088898155135,8.34356736922927,9.71718737855256,8.3115217823824,13.1415423084884,463.470944882789,1269.573135076,12.3834151632501,10.7325346502102,1508.35617482366,1680.58438340869,1164.8219177108,1219.20197629093,752.347607615383,1033.3652678176,856.621165925041,21.9897865128163,1613.09529111646,917.542700974259,811.310633519968,904.182396263746,920.058347687503,394.569704669615,473.916260147494,937.650430981921,4362.14831958981,3832.68238065945,2840.49833995834,536.662876639485,802.31365119533,717.187190799222,386.604153210648,506.667896749565,559.989619781183,399.26078313645,357.876717467092,195.698713807376,194.838862297561,137.408167434203,31.9411109610672,36.5499968563331,85.4049948482187,66.0295580301029,7.36014819974445,99.3029509460095,27.755177770639,378.428760895532,1515.41302005284,1197.87675345614,648.461065372774,435.03136261255,403.61614957844,345.069285768182,354.47320897375,207.35598399753,334.024492495558,292.466013900492,223.038915664273,305.598598942435,335.6623914554,203.522381265963,1546.17272856952,1284.26753024596,761.904293150024,879.366433636067,699.004763752123,282.016131778971,194.452351657091,27.0126570802672,63.1134885922327,41.461447077725,20.4552312690133,1736.52386029311,1621.41515068881,1956.97496408538,2479.76212385306,2272.61237634702,2946.02110511103,1823.41811916324,1210.33946787564,1381.04390833605,609.577195675983,454.756238050911,247.445874779847,112.145021808518,134.727457554956,26.0519501536218,76.4878207289743,1583.2007453424,925.152171261381,1786.05779252653,1540.74148001402,485.098121551498,244.946906471708,63.2233019059268,324.570761714647,366.302596679074,117.677619269225,50.9614908765945,95.4947949718403,110.367231697693,37.6978209848181,63.0930593229703,149.004574724768,74.7788582485825,4.17431533968259,5.04010252346474,864.101097080456,96.1914232648661,552.454892197865,553.251700668337,374.190441861872,309.225624550602,245.301340164716,203.815102167959,322.229318533216,191.427586931909,177.088924520043,10.9249247583414,84.8801709545446,816.430792814365,395.81531122919,79.3506291497896,10.619611067197,1959.72529504301,992.528237515278,662.003829943202,407.811914068347,268.083449007105,178.315522286073,348.992380298405,405.694016601813,128.310923721941,87.497445117249,95.9160552208138,13.2771446243977,1272.31169042524,1074.19451013199,623.29209787187,316.020296350532,450.202895627626,284.998903682874,467.658161840024,196.654891357389,59.5248119127335,10.5853631066382,133.063206123774,223.951159827221,418.873263626042,528.580739245888,310.226300518166,240.180209382997,10.3838169125885,2691.38724344698,1388.98362139249,1928.24541897344,5570.43201054272,3785.60994250607,3743.26847000512,2122.18069847328,2437.2545422165,2306.55756279583,5.72802370809068,1002.15242766504,681.526853809197,884.023714626443,621.201327458986,575.603718034924,452.874475160228,231.347022575215,134.804310121775,182.368267421553,19.8828580187816,73.8437749676289,818.005023406608,1236.30584069543,677.85684256735,1213.84402104372,866.913879893183,639.244878903422,407.279315791876,290.879821436922,140.601958320736,56.7419112327995,1151.22851244845,1629.09983007176,1595.3065866841,2009.48536899756,1722.23681232117,1411.23366301132,1852.57246345128,1897.36735561179,1887.16391598083,1766.01653742297,1862.15881329231,1754.72914271924,1783.19027296187,1074.91686936389,30.8353321716687,442.861976981259,955.721714460745,300.009809442608,14.1028403643499,81.2665118703618,66.1177363604827,127.977922310202,13.5424468089548,22.5900737046827,17.0320337507655,25.7802981047728,32.995811009988,11.6464028361009,17.3740596399631,13.5004500046361,11.2580300806055,14.0474146785103,7.24864436452548,2056.75386707563,324.407222075038,872.277991797871,906.544947947668,1060.22337657233,523.58631206564,477.608218045671,516.323853440669,417.515891678952,470.016813880663,507.71903768015,470.434095416874,589.941497060259,489.280214678011,473.842618883809,440.571664436843,377.08759662456,401.058269344043,481.728418039065,432.617626274994,735.454546366716,599.513273206242,537.912044521156,513.363543545384,492.850825235086,530.872049912378,475.246873523463,352.776483038147,537.648486715767,342.857927982878,374.768022254266,424.258805591552,245.129394858644,464.655586716712,466.641091963381,459.901273983758,324.229209305336,237.002772615273,154.752260643694,525.007577504447,632.76732340813
|phase1_expression=320.297694209588,114.46393370571,65.5198904720932,29.9439569193762,68.6227150026496,450.587965811512,396.674263731203,27.7615145399389,3.51971805379167,2.10658073689794,1.71217968225505,0.957265907944037,7.01922992717943,6.11942816932982,3357.74639910188,6442.56053307687,8226.14812490888,297.007628684781,251.467871232925,1172.58860791796,96.4390910313131,1685.96035139103,1616.56549498087,374.222276913778,475.565439652243,274.48287884698,373.470650669918,349.494339416512,438.574052105311,721.814291632442,837.697869255741,10086.8272172328,10941.3875063419,18162.0006443693,1653.9643746958,2386.96327270259,1892.24159383964,4773.77178018517,5849.85772444969,3425.93938056454,3194.09698000841,4986.91508568161,2873.25026923837,86.9947012211239,66.401889948782,74.5199813776427,373.200671254015,590.194098321869,82.3823185254269,51.5239232546851,278.572979034471,324.880795464836,119.796780725224,62.3811442129756,44.7004752859477,201.691397852182,98.2809698989936,33.0030139057563,198.472448103265,140.711600486361,232.616125086768,309.365057779118,402.850542638346,139.934406037258,232.383595203239,194.671551495231,457.489368761604,462.983057912473,687.876888054441,685.020131094998,871.586639840127,122.829923293636,165.65140571371,1170.03211410124,1346.62886780622,720.667528702256,15.4162233399144,8.04430229936683,7.0659005297872,137.689284390322,112.804264561771,170.338672172061,8.09630697104005,12.9435400307286,11.3070703354839,247.782640383355,127.707397676795,91.8949267918732,27.9429653399449,240.317561139578,46.9580471696718,37.858650587181,0.679971333707751,10.2543606411185,17.5439632710871,8.06448396775204,380.885267397311,676.267519989733,947.959130795868,769.220253709011,329.855289116986,132.176271736747,5.09610479413291,21.3320010945999,1779.77284815319,1392.97254038209,1420.52369049154,226.540817362615,141.639022355003,15.289540323677,1184.55781115918,1047.66571087208,613.437222701116,400.319333307766,221.654712950804,87.0869477914651,20.2699873542187,22.1237016087465,684.688567209203,486.918218341702,1269.83873114726,1959.86577317257,307.546406009902,1.75668478206928,2.30391377494801,214.583926375217,8644.54141797764,7299.61643072778,6640.81713706543,4.04434726393021,6.8625090422794,137.088898155135,8.34356736922927,9.71718737855256,8.3115217823824,13.1415423084884,463.470944882789,1269.573135076,12.3834151632501,10.7325346502102,1508.35617482366,1680.58438340869,1164.8219177108,1219.20197629093,752.347607615383,1033.3652678176,856.621165925041,21.9897865128163,1613.09529111646,917.542700974259,811.310633519968,904.182396263746,920.058347687503,394.569704669615,473.916260147494,937.650430981921,4362.14831958981,3832.68238065945,2840.49833995834,536.662876639485,802.31365119533,717.187190799222,386.604153210648,506.667896749565,559.989619781183,399.26078313645,357.876717467092,195.698713807376,194.838862297561,137.408167434203,31.9411109610672,36.5499968563331,85.4049948482187,66.0295580301029,7.36014819974445,99.3029509460095,27.755177770639,378.428760895532,1515.41302005284,1197.87675345614,648.461065372774,435.03136261255,403.61614957844,345.069285768182,354.47320897375,207.35598399753,334.024492495558,292.466013900492,223.038915664273,305.598598942435,335.6623914554,203.522381265963,1546.17272856952,1284.26753024596,761.904293150024,879.366433636067,699.004763752123,282.016131778971,194.452351657091,27.0126570802672,63.1134885922327,41.461447077725,20.4552312690133,1736.52386029311,1621.41515068881,1956.97496408538,2479.76212385306,2272.61237634702,2946.02110511103,1823.41811916324,1210.33946787564,1381.04390833605,609.577195675983,454.756238050911,247.445874779847,112.145021808518,134.727457554956,26.0519501536218,76.4878207289743,1583.2007453424,925.152171261381,1786.05779252653,1540.74148001402,485.098121551498,244.946906471708,63.2233019059268,324.570761714647,366.302596679074,117.677619269225,50.9614908765945,95.4947949718403,110.367231697693,37.6978209848181,63.0930593229703,149.004574724768,74.7788582485825,4.17431533968259,5.04010252346474,864.101097080456,96.1914232648661,552.454892197865,553.251700668337,374.190441861872,309.225624550602,245.301340164716,203.815102167959,322.229318533216,191.427586931909,177.088924520043,10.9249247583414,84.8801709545446,816.430792814365,395.81531122919,79.3506291497896,10.619611067197,1959.72529504301,992.528237515278,662.003829943202,407.811914068347,268.083449007105,178.315522286073,348.992380298405,405.694016601813,128.310923721941,87.497445117249,95.9160552208138,13.2771446243977,1272.31169042524,1074.19451013199,623.29209787187,316.020296350532,450.202895627626,284.998903682874,467.658161840024,196.654891357389,59.5248119127335,10.5853631066382,133.063206123774,223.951159827221,418.873263626042,528.580739245888,310.226300518166,240.180209382997,10.3838169125885,2691.38724344698,1388.98362139249,1928.24541897344,5570.43201054272,3785.60994250607,3743.26847000512,2122.18069847328,2437.2545422165,2306.55756279583,5.72802370809068,1002.152427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|short_description=p4@Hist1h2ab,p4@Hist1h2ac,p4@Hist1h2ad,p4@Hist1h2ae,p4@Hist1h2ag,p4@Hist1h2ah,p4@Hist1h2ai,p4@Hist1h2an,p4@Hist1h2ao,p4@Hist1h2ap
|short_description=p4@Hist1h2ab,p4@Hist1h2ac,p4@Hist1h2ad,p4@Hist1h2ae,p4@Hist1h2ag,p4@Hist1h2ah,p4@Hist1h2ai,p4@Hist1h2an,p4@Hist1h2ao,p4@Hist1h2ap
}}
}}

Revision as of 02:03, 18 April 2012

Short description:p4@Hist1h2ab, p4@Hist1h2ac, p4@Hist1h2ad, p4@Hist1h2ae, p4@Hist1h2ag, p4@Hist1h2ah, p4@Hist1h2ai, p4@Hist1h2an, p4@Hist1h2ao, p4@Hist1h2ap
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Hist1h2ab_5end, CAGE_peak_4_at_Hist1h2ac_5end, CAGE_peak_4_at_Hist1h2ad_5end, CAGE_peak_4_at_Hist1h2ae_5end, CAGE_peak_4_at_Hist1h2ag_5end, CAGE_peak_4_at_Hist1h2ah_5end, CAGE_peak_4_at_Hist1h2ai_5end, CAGE_peak_4_at_Hist1h2an_5end, CAGE_peak_4_at_Hist1h2ao_5end, CAGE_peak_4_at_Hist1h2ap_5end
Coexpression cluster:NA
Association with transcript: -1bp_to_ENSMUST00000078369, NM_175660, uc007put.1_5end
EntrezGene:319164,319165,319166,319167,319168,319170,319171,319172,319191,665433
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Hist1h2abp4@Hist1h2acp4@Hist1h2adp4@Hist1h2aep4@Hist1h2agp4@Hist1h2ahp4@Hist1h2aip4@Hist1h2anp4@Hist1h2aop4@Hist1h2ap

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7320.30
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5114.46
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I665.52
CD326+ enterocyte, pool1.CNhs13542.11848-124I329.94
CD326+ enterocyte, pool2.CNhs13197.11849-124I468.62
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7450.59
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8396.67
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E927.76
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.11
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.71
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.96
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.02
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.12
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13357.75
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36442.56
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A58226.15
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2297.01
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4251.47
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61172.59
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A396.44
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21685.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91616.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1374.22
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2475.57
GP2+ M cell, pool1.CNhs13228.11845-124H9274.48
GP2+ M cell, pool2.CNhs13231.11846-124I1373.47
GP2+ M cell, pool3.CNhs13240.11847-124I2349.49
Ileum epithelium, pool1.CNhs13199.10252-104B9438.57
Ileum epithelium, pool2.CNhs13232.10253-104C1721.81
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8837.70
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I310086.83
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G610941.39
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E918162.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51653.96
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62386.96
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71892.24
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84773.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H15849.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33425.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93194.10
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24986.92
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42873.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D886.99
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D966.40
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B374.52
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7373.20
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2590.19
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B882.38
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C351.52
Mouse Astrocytes, donor2.CNhs12078.11552-120C4278.57
Mouse Astrocytes, donor3.CNhs12107.11633-122C4324.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2119.80
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I962.38
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A144.70
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1201.69
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E198.28
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C533.00
Mouse Granule cells, donor1.CNhs12131.11713-123C3198.47
Mouse Granule cells, donor2.CNhs12357.11731-123E3140.71
Mouse Granule cells, donor3.CNhs12108.11636-122C7232.62
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6309.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1402.85
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7139.93
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7232.38
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2194.67
Mouse Microglia, donor1.CNhs12629.11718-123C8457.49
Mouse Microglia, donor2.CNhs12634.11736-123E8462.98
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5687.88
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5685.02
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9871.59
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1122.83
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5165.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21170.03
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21346.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6720.67
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D315.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4137.69
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4112.80
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8170.34
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.10
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6247.78
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6127.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E191.89
Mouse Schwann, donor1.CNhs12507.11728-123D927.94
Mouse Schwann, donor2.CNhs12573.11746-123F9240.32
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G346.96
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F737.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C810.25
Mouse hepatocyte, donor6.CNhs13090.11822-124F417.54
Mouse hepatocyte, donor8.CNhs13091.11824-124F68.06
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7380.89
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7676.27
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3947.96
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8769.22
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6329.86
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1132.18
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11779.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21392.97
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31420.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6226.54
accessory axillary lymph node, adult.CNhs10475.1063-29H9141.64
adrenal gland, adult.CNhs10508.49-24D715.29
adrenal gland, embryo E14.CNhs11038.406-44C51184.56
adrenal gland, embryo E16.CNhs11004.1254-43D61047.67
adrenal gland, embryo E17.CNhs11043.1263-45I1613.44
adrenal gland, embryo E18.CNhs11026.1262-18F5400.32
adrenal gland, neonate N00.CNhs11191.1311-23C1221.65
adrenal gland, neonate N25.CNhs11223.1377-27I387.09
amnion, adult pregnant day17.5.CNhs10488.583-22A820.27
aorta, adult.CNhs10498.46-23H122.12
bone (os femoris), adult.CNhs10483.56-12G2684.69
bone (os femoris), neonate N02.CNhs11227.1985-43F5486.92
bone (os femoris), neonate N16.CNhs11225.1525-43A61269.84
bone (os femoris), neonate N20.CNhs11195.1350-25C31959.87
cecum, adult.CNhs10467.37-13H4307.55
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H7214.58
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C78644.54
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D17299.62
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46640.82
corpora quadrigemina, adult.CNhs10501.16-22A44.04
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F1137.09
cortex, adult.CNhs10473.12-14D58.34
cortex, neonate N30.CNhs11107.1392-42F29.72
diencephalon, adult.CNhs10482.20-12F28.31
diencephalon, neonate N30.CNhs11201.1388-42B213.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1463.47
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21269.57
epididymis, adult.CNhs10490.58-23B212.38
eyeball, adult.CNhs10484.31-12G410.73
eyeball, embryo E12.CNhs11016.345-16C61508.36
eyeball, embryo E14.CNhs10521.399-16E21680.58
eyeball, embryo E15.CNhs10593.426-16C91164.82
eyeball, embryo E17.CNhs11023.1261-18D41219.20
eyeball, neonate N00.CNhs11207.633-15C6752.35
eyeball, neonate N01.CNhs11140.1532-43E71033.37
eyeball, neonate N02.CNhs11205.1551-44G8856.62
eyeball, neonate N16.CNhs11188.777-19A221.99
forelimb, embryo E11.CNhs10596.335-25E21613.10
forelimb, embryo E12.CNhs10600.359-14H2917.54
forelimb, embryo E13.CNhs10589.384-1E2811.31
forelimb, embryo E14.CNhs10577.413-26A8904.18
forelimb, embryo E15.CNhs11007.437-20E7920.06
forelimb, embryo E17.CNhs10598.1517-43C4394.57
forelimb, embryo E18.CNhs11008.1520-43B5473.92
gonad, embryo E13.CNhs11044.1564-45I6937.65
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84362.15
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23832.68
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52840.50
heart, embryo E11.CNhs10586.331-24E9536.66
heart, embryo E12.CNhs11015.353-12F5802.31
heart, embryo E13.CNhs11013.376-3I9717.19
heart, embryo E14.CNhs10597.403-26D4386.60
heart, embryo E15.CNhs11017.431-16C8506.67
heart, embryo E16.CNhs11021.457-17C6559.99
heart, embryo E17.CNhs11025.479-18E5399.26
heart, embryo E18.CNhs11030.1283-20G3357.88
heart, neonate N00.CNhs11213.639-21E3195.70
heart, neonate N03.CNhs11221.1349-25I2194.84
heart, neonate N10.CNhs11118.749-24G1137.41
heart, neonate N16.CNhs11209.782-15G131.94
heart, neonate N20.CNhs11127.821-26I636.55
heart, neonate N25.CNhs11196.1351-25D385.40
heart, neonate N30.CNhs11202.1390-42D266.03
hippocampus, adult.CNhs10478.13-16E87.36
hippocampus, neonate N00.CNhs11228.627-43G199.30
intestinal mucosa, adult.CNhs10506.860-29I327.76
intestine, adult.CNhs10496.178-9A3378.43
intestine, embryo E12.CNhs11019.1251-16I51515.41
intestine, embryo E13.CNhs11010.381-16D51197.88
intestine, embryo E15.CNhs10602.976-16D8648.46
intestine, embryo E16.CNhs10585.463-22H4435.03
intestine, embryo E17.CNhs10582.482-18D3403.62
intestine, embryo E18.CNhs10526.1289-20F7345.07
intestine, neonate N00.CNhs11126.644-26D1354.47
intestine, neonate N01.CNhs11192.1322-23E9207.36
intestine, neonate N06.CNhs11102.688-20B8334.02
intestine, neonate N07.CNhs11095.720-20F2292.47
intestine, neonate N10.CNhs11098.755-23A5223.04
intestine, neonate N20.CNhs11187.827-18D1305.60
intestine, neonate N25.CNhs11121.1352-25E3335.66
intestine, neonate N30.CNhs11131.1384-42G1203.52
kidney, embryo E14.CNhs10606.411-4I91546.17
kidney, embryo E15.CNhs10997.434-16F81284.27
kidney, embryo E16.CNhs10584.464-22A5761.90
kidney, embryo E17.CNhs11028.483-18I2879.37
kidney, embryo E18.CNhs11001.1288-20C7699.00
kidney, neonate N00.CNhs11214.646-21G7282.02
kidney, neonate N10.CNhs11206.758-6D5194.45
kidney, neonate N20.CNhs11113.832-19I127.01
kidney, neonate N25.CNhs11122.1353-25F363.11
kidney, neonate N30.CNhs11203.1385-42H141.46
liver, adult pregnant day01.CNhs10466.508-5B220.46
liver, embryo E12.CNhs10601.355-15F81736.52
liver, embryo E13.CNhs10524.378-3H61621.42
liver, embryo E14.CNhs10594.409-16E11956.97
liver, embryo E15.CNhs10520.433-16D72479.76
liver, embryo E16.CNhs10523.462-17F52272.61
liver, embryo E17.CNhs10510.481-18A32946.02
liver, embryo E18.CNhs10579.499-43G41823.42
liver, neonate N00.CNhs11117.641-24F41210.34
liver, neonate N03.CNhs11123.1345-25G21381.04
liver, neonate N06.CNhs11101.684-20A8609.58
liver, neonate N07.CNhs11103.716-20H2454.76
liver, neonate N10.CNhs11115.751-24B9247.45
liver, neonate N20.CNhs11220.823-25A3112.15
liver, neonate N25.CNhs11198.1368-26H1134.73
liver, neonate N30.CNhs11106.1382-42D126.05
lung, adult.CNhs10474.28-22B176.49
lung, embryo E12.CNhs10522.354-16G21583.20
lung, embryo E14.CNhs10604.404-26F8925.15
lung, embryo E15.CNhs11020.432-17C51786.06
lung, embryo E16.CNhs10998.458-17B61540.74
lung, embryo E17.CNhs10605.480-44A6485.10
lung, embryo E18.CNhs10583.1287-20I6244.95
lung, neonate N00.CNhs11224.640-42C663.22
lung, neonate N06.CNhs11212.683-20E5324.57
lung, neonate N07.CNhs11111.715-19A3366.30
lung, neonate N10.CNhs11219.750-23E6117.68
lung, neonate N20.CNhs11109.822-18A450.96
lung, neonate N25.CNhs11119.1359-25C795.49
lung, neonate N30.CNhs11133.1394-42H2110.37
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A137.70
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A163.09
mammary gland, adult lactating day02.CNhs10480.595-22B6149.00
mammary gland, adult pregnant day19.CNhs10476.588-5H274.78
medulla oblongata, adult.CNhs10477.17-12C24.17
medulla oblongata, neonate N30.CNhs11200.1396-42A35.04
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7864.10
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C296.19
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1552.45
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2553.25
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3374.19
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7309.23
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8245.30
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9203.82
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4322.23
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5191.43
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6177.09
olfactory brain, adult.CNhs10489.18-22I910.92
ovary, adult.CNhs10507.91-2I784.88
ovary, embryo E18.CNhs11040.505-44H7816.43
ovary, neonate N00.CNhs11217.1299-22I4395.82
oviduct, adult pregnant day01.CNhs10500.988-6G679.35
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F41959.73
pancreas, embryo E15.CNhs11042.1556-45F2992.53
pancreas, embryo E16.CNhs11003.460-26E5662.00
pancreas, embryo E17.CNhs10599.1558-45G3407.81
pancreas, embryo E18.CNhs10580.1535-43I7268.08
pancreas, neonate N00.CNhs11105.645-26G9178.32
pancreas, neonate N01.CNhs11138.1531-43D7348.99
pancreas, neonate N02.CNhs11139.1539-43D8405.69
pancreas, neonate N16.CNhs11136.787-43B6128.31
pancreas, neonate N25.CNhs11094.1555-45E287.50
pancreas, neonate N30.CNhs11182.1548-44H595.92
pituitary gland, adult.CNhs10493.21-1G813.28
pituitary gland, embryo E12.CNhs11018.346-16E61272.31
pituitary gland, embryo E13.CNhs11009.370-44C71074.19
pituitary gland, embryo E14.CNhs11037.398-44A5623.29
pituitary gland, embryo E15.CNhs10592.427-16B9316.02
pituitary gland, embryo E16.CNhs11036.449-43F6450.20
pituitary gland, embryo E17.CNhs11039.1265-44F5285.00
pituitary gland, neonate N00.CNhs11190.1308-22E9467.66
placenta, adult pregnant day10.CNhs10472.539-13I7196.65
placenta, adult pregnant day17.CNhs10464.577-18G359.52
prostate, adult.CNhs10470.859-1F810.59
skin, adult.CNhs10492.30-1C3133.06
skin, neonate N00.CNhs11124.650-25G4223.95
skin, neonate N03.CNhs11215.662-22H3418.87
skin, neonate N06.CNhs11097.693-20I5528.58
skin, neonate N10.CNhs11108.762-6C4310.23
small intestine, neonate N16.CNhs11114.790-21I1240.18
spinal cord, adult.CNhs10505.24-13C910.38
spleen, adult.CNhs10465.25-2G22691.39
spleen, embryo E16.CNhs11035.461-43C11388.98
spleen, embryo E18.CNhs11011.1271-21F21928.25
spleen, neonate N10.CNhs11116.752-24D15570.43
spleen, neonate N20.CNhs11112.824-19H13785.61
spleen, neonate N25.CNhs11099.1354-25G33743.27
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62122.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92437.25
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32306.56
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E31002.15
stomach, embryo E15.CNhs10603.1252-16G8681.53
stomach, embryo E16.CNhs11022.459-17D4884.02
stomach, embryo E17.CNhs11006.1035-18D5621.20
stomach, embryo E18.CNhs10999.1286-20C6575.60
stomach, neonate N03.CNhs11193.1340-24B8452.87
stomach, neonate N07.CNhs11210.718-18A9231.35
stomach, neonate N25.CNhs11104.1355-25E4134.80
stomach, neonate N30.CNhs11134.1386-42I1182.37
submandibular gland, adult.CNhs10469.59-29C119.88
testis, adult.CNhs10504.57-7G573.84
testis, embryo E13.CNhs11031.389-23F5818.01
testis, embryo E15.CNhs11034.443-27C51236.31
testis, embryo E16.CNhs11033.470-26G5677.86
testis, embryo E17.CNhs11029.486-18I51213.84
testis, embryo E18.CNhs11027.503-18G5866.91
testis, neonate N00.CNhs11189.1300-22B7639.24
testis, neonate N07.CNhs11222.726-26I4407.28
testis, neonate N10.CNhs11204.763-44D9290.88
testis, neonate N20.CNhs11110.839-18H3140.60
testis, neonate N30.CNhs11130.1391-42E256.74
thymus, adult.CNhs10471.38-12B51151.23
thymus, embryo E14.CNhs11041.402-44I41629.10
thymus, embryo E15.CNhs11005.430-45I21595.31
thymus, embryo E16.CNhs11002.456-26C52009.49
thymus, embryo E17.CNhs10581.478-18C11722.24
thymus, embryo E18.CNhs10595.1273-19G41411.23
thymus, neonate N02.CNhs11181.1541-43F81852.57
thymus, neonate N03.CNhs11137.2104-43C71897.37
thymus, neonate N06.CNhs11197.681-26C41887.16
thymus, neonate N07.CNhs11211.713-19D31766.02
thymus, neonate N10.CNhs11194.748-24E41862.16
thymus, neonate N20.CNhs11186.820-7A21754.73
thymus, neonate N25.CNhs11125.1362-25G71783.19
thymus, neonate N30.CNhs11132.1393-42G21074.92
tongue, adult.CNhs10499.32-1B430.84
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3442.86
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7955.72
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5300.01
urinary bladder, adult.CNhs10481.879-12E414.10
uterus, adult pregnant day19.CNhs10497.590-15F581.27
uterus, adult.CNhs10509.92-27E566.12
vagina, adult.CNhs10502.89-27D5127.98
vesicular gland, adult.CNhs10491.51-27F813.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A122.59
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A217.03
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A325.78
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D733.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A411.65
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A517.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A613.50
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A711.26
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.05
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I82056.75
whole body, embryo E12.CNhs10587.857-27C9324.41
whole body, embryo E13.CNhs10512.372-23H2872.28
whole body, embryo E14.5.CNhs10578.420-27D2906.54
whole body, embryo E14.CNhs10519.395-14B11060.22
whole body, embryo E16.CNhs10514.453-14F2523.59
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5477.61
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5516.32
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5417.52
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5470.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5507.72
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5470.43
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5589.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5489.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5473.84
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5440.57
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5377.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5401.06
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5481.73
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5432.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5735.45
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5599.51
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5537.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5513.36
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5492.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5530.87
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5475.25
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5352.78
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5537.65
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5342.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5374.77
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5424.26
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5245.13
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5464.66
whole body, embryo E17.5.CNhs10513.490-9F9466.64
whole body, embryo E17.CNhs10517.475-3I5459.90
whole body, embryo E18.CNhs10516.493-3B3324.23
whole body, neonate N00.CNhs10525.657-19C2237.00
whole body, neonate N01.CNhs10576.659-23C6154.75
whole body, neonate N06.CNhs10515.692-21D1525.01
whole body, neonate N10.CNhs10518.761-6B4632.77





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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