Personal tools

FFCP PHASE1:Mm9::chr19:29175877..29175928,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_1_at_Rcl1_5end
|description=CAGE_peak_1_at_Rcl1_5end
|id=chr19:29175877..29175928,+
|id=chr19:29175877..29175928,+
|ontology_enrichment_celltype=CL:0000988!8.86e-11!32;CL:0002032!8.86e-11!32;CL:0000037!8.86e-11!32;CL:0000566!8.86e-11!32;CL:0000837!8.86e-11!32;CL:0002320!3.56e-10!46;CL:0000134!3.56e-10!46;CL:0000063!8.21e-09!66;CL:0000542!1.08e-07!13;CL:0000051!1.08e-07!13;CL:0002031!1.12e-07!25;CL:0000838!1.59e-07!12;CL:0000034!1.91e-07!97;CL:0000084!4.58e-07!11;CL:0000827!4.58e-07!11;CL:0000219!5.07e-07!54
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=15.6945870162698,4.88565570695105,8.64498554840118,1.81478526784098,5.00895729946347,31.5613031194353,28.0335168714631,33.5720640948098,207.240999007253,220.254719268996,181.491046319035,162.575660032496,32.0145364971355,40.2133851127388,39.3069518942482,28.1440621671858,32.1798463938947,28.0761327168832,27.5600011547535,33.1023928402464,13.0116233931137,25.3191925562258,32.9111734315059,19.679068003589,22.2527002635155,13.7815671387605,15.5074318617267,17.8841123129288,14.0617330397717,17.1380488236753,22.6165120868411,67.3132513867209,55.9708956701959,15.8481681015439,45.6385559207014,53.693790450793,43.4880728838846,2.51118978442145,3.906676722619,0.523523743973798,0.588231488031014,0.683045484958446,1.45653105909346,20.1434908760924,18.5519784131712,20.0065959856233,15.6478268869608,15.9158364157726,12.5221124158649,9.52706505463989,13.1587236327841,11.5002051491977,34.0598690297205,29.7398478224651,37.9785993030984,15.9500850342287,14.3266719969378,9.28209766099396,17.8038485556446,16.9277113367051,19.0149421051854,14.9091594110418,18.6751907183339,13.498495759221,12.8552627133707,14.9200824138681,16.7776061890307,14.6002956022191,16.3829587447395,19.5758610580951,18.718921560273,27.9937964715728,26.5042249141936,16.2912762955889,18.0189485514284,17.4651569455904,19.82085857989,16.7270412891596,18.279177457493,12.5291973343684,14.5465353327831,12.5019208933622,17.3093459380856,22.5105044012672,18.9469827243245,24.1595440088408,21.0710087582672,21.8087351615602,28.5487748866104,13.8295954995417,12.4641730141721,43.8816177260507,86.3563593808843,60.4467574634355,49.3830077260229,52.4191457903883,20.364440919104,16.1908806449155,23.3807404142582,23.3204119176825,13.0984380392313,24.3820307087204,28.028576367731,21.3320010945999,23.5975234702223,22.2956681618087,21.2320266906209,25.3488212976313,28.2242293175417,17.813056687779,26.0227990149204,19.1813251336649,14.7593918243877,14.6200961336044,16.5800077061344,20.1066546127481,20.0227923864843,28.7752720270624,15.0383793831479,14.3972496453194,16.3422723660691,15.5160081003271,14.9113408974498,17.2740670236813,14.4518227701284,15.3274233125155,47.0873439308267,41.9931911695385,36.8503658511888,14.0803201040533,19.6725259212009,19.3507702253811,13.3844726548053,9.71718737855256,13.5062228963714,14.4394724130304,15.5814226690984,14.0579876789405,13.6470289554184,22.7277204357392,18.6072233436666,20.4612872945791,14.5850325142333,12.2070902446929,12.654788842147,13.7081680704789,14.6174690313177,12.4177617954728,25.8681591519411,18.3432897762785,15.4836989264275,22.3579647076126,17.2389294519871,14.2783388274088,15.4336602305958,23.2870092177637,25.9818879305897,41.4330130454691,41.7720344111521,13.6703009873431,14.540615718828,8.82304101158973,10.6535131013345,8.26409773339096,7.55908853148153,7.44108623201305,7.77992864058896,7.35621656913168,6.58239399653922,7.22336841948019,6.4044359541226,5.26319954731196,10.7579556492615,8.99183005694491,16.1923260394378,14.5095503454791,2.97376904685418,23.800550999719,24.3148605610167,23.9203772016252,25.9023597257408,22.1851877085677,16.9007313322101,14.0766963323294,21.353807769503,17.4580892007452,16.3367885720175,12.7332142106337,13.4525220112193,18.8752075817387,12.9682829924817,14.1390304010601,28.4501851429623,22.0499629336777,21.4144697778853,19.5505274731502,18.0375813065892,17.8144982521409,12.0781785907331,10.0374900626129,12.0889020437859,13.8204823592417,53.3614728756868,33.5358662489349,37.739327061735,36.6525243187312,31.849039057995,33.7648023653384,27.4995919923933,32.2219673944908,53.9910305160868,35.1438608880744,30.1913233707445,28.6548529704748,39.3167468124346,48.4951445658455,41.2614051100398,55.9634484781506,12.0089573608293,20.2755810594419,21.8373068432315,20.5391553787978,13.6120344007331,12.3954630506944,8.56957107189649,11.3177515757523,10.0886492227962,8.858587585951,12.9158362612565,16.7140581010053,17.4411831684555,17.7918342055259,12.0633027151418,15.2293591469239,28.0305635620851,30.0771053472158,11.3990918891332,13.3621322715112,31.6394444576984,18.4303776859192,17.0374438484779,14.4462335389756,15.2950612390287,17.9226598464414,16.932699230262,18.3999745012741,12.5491317519217,12.2747460322751,11.4633455604492,23.1351347823701,20.1554920995741,19.5872164033981,17.4289046508326,23.7556977080451,25.2215762845929,26.9486506132029,32.3486205952284,23.5756349694873,21.5570381802964,22.4427657999067,27.1349707826632,21.4484900391728,19.9638531895444,30.0234920039025,25.3004660579997,20.6271086496374,20.0859367394735,17.4659261210371,17.7221396782374,15.4322665222746,13.6551979904551,15.5180871313801,13.4930196893739,17.0500371504176,23.2324990983073,14.6164128896036,18.0833286405069,18.7970328353287,24.0581995776899,19.1191972022254,19.8158091045207,16.5782308742512,15.7399651780119,13.9068976507882,19.8210221725509,15.6854019652049,22.2233432843654,20.3437933565066,19.2738861086645,25.6231553991305,47.2540035382918,44.9244161958942,44.0857916436112,9.54670618015114,18.1893196309153,18.7053909756701,20.3050040744986,20.072476417389,17.6873676634404,15.1048067950999,14.7949685748351,10.4702376793612,13.0911123024711,16.1548221402601,10.1464728963154,20.1847337159371,22.9987301735366,17.5006069509643,20.1489324625261,16.5577002980963,16.8994423649886,20.3118840356562,24.4322272511906,14.4950472495604,9.79302021276743,11.0603892219862,35.4769126757787,27.0129817343496,25.8542437725812,22.5573636541027,17.4839592207513,19.351467372715,16.6889165707272,17.770095190874,15.927222590895,15.5272325110734,15.4958030376206,15.8749538706544,15.193997283604,17.0047787711409,46.3950642551795,62.620271913414,36.7667309837332,15.261977928543,23.6479919068489,27.4727436400898,13.7195762610602,19.0597399533438,8.471277639256,13.8097570952153,13.7494923225455,17.7008777813998,15.7568979547248,14.3524840504043,14.8504950050997,16.6618845192962,14.0474146785103,12.9440077937955,24.1824519871132,15.9609949360412,20.6587662962502,18.9623239313269,24.5247400274739,25.1865606576519,15.3350242183115,16.4828045791115,14.1204452220399,14.9091354940641,16.7296337927558,15.0901073108861,16.0126977773499,14.1495586814761,15.2778347421931,12.859929664643,17.2667645657835,17.3618298417335,21.0163809409686,14.7198920134397,12.343293085875,18.6349596467304,16.2136609164178,17.1508771626148,17.1279072355902,15.8229316757435,19.3903651245139,18.9410192235247,13.716215498432,20.7622640513363,17.9138877367503,15.7607171800902,21.6892452879935,21.3812840836633,15.4325288784913,13.739581786587,15.2055545489515,18.9086527562503,24.484906504812,14.559033661888,16.6944841646703
|phase1_expression=15.6945870162698,4.88565570695105,8.64498554840118,1.81478526784098,5.00895729946347,31.5613031194353,28.0335168714631,33.5720640948098,207.240999007253,220.254719268996,181.491046319035,162.575660032496,32.0145364971355,40.2133851127388,39.3069518942482,28.1440621671858,32.1798463938947,28.0761327168832,27.5600011547535,33.1023928402464,13.0116233931137,25.3191925562258,32.9111734315059,19.679068003589,22.2527002635155,13.7815671387605,15.5074318617267,17.8841123129288,14.0617330397717,17.1380488236753,22.6165120868411,67.3132513867209,55.9708956701959,15.8481681015439,45.6385559207014,53.693790450793,43.4880728838846,2.51118978442145,3.906676722619,0.523523743973798,0.588231488031014,0.683045484958446,1.45653105909346,20.1434908760924,18.5519784131712,20.0065959856233,15.6478268869608,15.9158364157726,12.5221124158649,9.52706505463989,13.1587236327841,11.5002051491977,34.0598690297205,29.7398478224651,37.9785993030984,15.9500850342287,14.3266719969378,9.28209766099396,17.8038485556446,16.9277113367051,19.0149421051854,14.9091594110418,18.6751907183339,13.498495759221,12.8552627133707,14.9200824138681,16.7776061890307,14.6002956022191,16.3829587447395,19.5758610580951,18.718921560273,27.9937964715728,26.5042249141936,16.2912762955889,18.0189485514284,17.4651569455904,19.82085857989,16.7270412891596,18.279177457493,12.5291973343684,14.5465353327831,12.5019208933622,17.3093459380856,22.5105044012672,18.9469827243245,24.1595440088408,21.0710087582672,21.8087351615602,28.5487748866104,13.8295954995417,12.4641730141721,43.8816177260507,86.3563593808843,60.4467574634355,49.3830077260229,52.4191457903883,20.364440919104,16.1908806449155,23.3807404142582,23.3204119176825,13.0984380392313,24.3820307087204,28.028576367731,21.3320010945999,23.5975234702223,22.2956681618087,21.2320266906209,25.3488212976313,28.2242293175417,17.813056687779,26.0227990149204,19.1813251336649,14.7593918243877,14.6200961336044,16.5800077061344,20.1066546127481,20.0227923864843,28.7752720270624,15.0383793831479,14.3972496453194,16.3422723660691,15.5160081003271,14.9113408974498,17.2740670236813,14.4518227701284,15.3274233125155,47.0873439308267,41.9931911695385,36.8503658511888,14.0803201040533,19.6725259212009,19.3507702253811,13.3844726548053,9.71718737855256,13.5062228963714,14.4394724130304,15.5814226690984,14.0579876789405,13.6470289554184,22.7277204357392,18.6072233436666,20.4612872945791,14.5850325142333,12.2070902446929,12.654788842147,13.7081680704789,14.6174690313177,12.4177617954728,25.8681591519411,18.3432897762785,15.4836989264275,22.3579647076126,17.2389294519871,14.2783388274088,15.4336602305958,23.2870092177637,25.9818879305897,41.4330130454691,41.7720344111521,13.6703009873431,14.540615718828,8.82304101158973,10.6535131013345,8.26409773339096,7.55908853148153,7.44108623201305,7.77992864058896,7.35621656913168,6.58239399653922,7.22336841948019,6.4044359541226,5.26319954731196,10.7579556492615,8.99183005694491,16.1923260394378,14.5095503454791,2.97376904685418,23.800550999719,24.3148605610167,23.9203772016252,25.9023597257408,22.1851877085677,16.9007313322101,14.0766963323294,21.353807769503,17.4580892007452,16.3367885720175,12.7332142106337,13.4525220112193,18.8752075817387,12.9682829924817,14.1390304010601,28.4501851429623,22.0499629336777,21.4144697778853,19.5505274731502,18.0375813065892,17.8144982521409,12.0781785907331,10.0374900626129,12.0889020437859,13.8204823592417,53.3614728756868,33.5358662489349,37.739327061735,36.6525243187312,31.849039057995,33.7648023653384,27.4995919923933,32.2219673944908,53.9910305160868,35.1438608880744,30.1913233707445,28.6548529704748,39.3167468124346,48.4951445658455,41.2614051100398,55.9634484781506,12.0089573608293,20.2755810594419,21.8373068432315,20.5391553787978,13.6120344007331,12.3954630506944,8.56957107189649,11.3177515757523,10.0886492227962,8.858587585951,12.9158362612565,16.7140581010053,17.4411831684555,17.7918342055259,12.0633027151418,15.2293591469239,28.0305635620851,30.0771053472158,11.3990918891332,13.3621322715112,31.6394444576984,18.4303776859192,17.0374438484779,14.4462335389756,15.2950612390287,17.9226598464414,16.932699230262,18.3999745012741,12.5491317519217,12.2747460322751,11.4633455604492,23.1351347823701,20.1554920995741,19.5872164033981,17.4289046508326,23.7556977080451,25.2215762845929,26.9486506132029,32.3486205952284,23.5756349694873,21.5570381802964,22.4427657999067,27.1349707826632,21.4484900391728,19.9638531895444,30.0234920039025,25.3004660579997,20.6271086496374,20.0859367394735,17.4659261210371,17.7221396782374,15.4322665222746,13.6551979904551,15.5180871313801,13.4930196893739,17.0500371504176,23.2324990983073,14.6164128896036,18.0833286405069,18.7970328353287,24.0581995776899,19.1191972022254,19.8158091045207,16.5782308742512,15.7399651780119,13.9068976507882,19.8210221725509,15.6854019652049,22.2233432843654,20.3437933565066,19.2738861086645,25.6231553991305,47.2540035382918,44.9244161958942,44.0857916436112,9.54670618015114,18.1893196309153,18.7053909756701,20.3050040744986,20.072476417389,17.6873676634404,15.1048067950999,14.7949685748351,10.4702376793612,13.0911123024711,16.1548221402601,10.1464728963154,20.1847337159371,22.9987301735366,17.5006069509643,20.1489324625261,16.5577002980963,16.8994423649886,20.3118840356562,24.4322272511906,14.4950472495604,9.79302021276743,11.0603892219862,35.4769126757787,27.0129817343496,25.8542437725812,22.5573636541027,17.4839592207513,19.351467372715,16.6889165707272,17.770095190874,15.927222590895,15.5272325110734,15.4958030376206,15.8749538706544,15.193997283604,17.0047787711409,46.3950642551795,62.620271913414,36.7667309837332,15.261977928543,23.6479919068489,27.4727436400898,13.7195762610602,19.0597399533438,8.471277639256,13.8097570952153,13.7494923225455,17.7008777813998,15.7568979547248,14.3524840504043,14.8504950050997,16.6618845192962,14.0474146785103,12.9440077937955,24.1824519871132,15.9609949360412,20.6587662962502,18.9623239313269,24.5247400274739,25.1865606576519,15.3350242183115,16.4828045791115,14.1204452220399,14.9091354940641,16.7296337927558,15.0901073108861,16.0126977773499,14.1495586814761,15.2778347421931,12.859929664643,17.2667645657835,17.3618298417335,21.0163809409686,14.7198920134397,12.343293085875,18.6349596467304,16.2136609164178,17.1508771626148,17.1279072355902,15.8229316757435,19.3903651245139,18.9410192235247,13.716215498432,20.7622640513363,17.9138877367503,15.7607171800902,21.6892452879935,21.3812840836633,15.4325288784913,13.739581786587,15.2055545489515,18.9086527562503,24.484906504812,14.559033661888,16.6944841646703
|short_description=p1@Rcl1
|short_description=p1@Rcl1
}}
}}

Revision as of 10:24, 18 April 2012

Short description:p1@Rcl1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rcl1_5end
Coexpression cluster:NA
Association with transcript: 12bp_to_ENSMUST00000064393, NM_021525, uc008hda.1, uc012bkh.1_5end
EntrezGene:Rcl1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rcl1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G715.69
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I68.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I731.56
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I828.03
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E933.57
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7207.24
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2220.25
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6181.49
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1162.58
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E432.01
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E840.21
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A139.31
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A328.14
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A532.18
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A228.08
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A427.56
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A633.10
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A313.01
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H225.32
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I932.91
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D119.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D222.25
GP2+ M cell, pool1.CNhs13228.11845-124H913.78
GP2+ M cell, pool2.CNhs13231.11846-124I115.51
GP2+ M cell, pool3.CNhs13240.11847-124I217.88
Ileum epithelium, pool1.CNhs13199.10252-104B914.06
Ileum epithelium, pool2.CNhs13232.10253-104C117.14
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C822.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I367.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G655.97
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F545.64
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F653.69
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F743.49
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D820.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D918.55
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B320.01
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B715.65
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C215.92
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B812.52
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C39.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C413.16
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A234.06
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I929.74
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A137.98
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C115.95
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E114.33
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59.28
Mouse Granule cells, donor1.CNhs12131.11713-123C317.80
Mouse Granule cells, donor2.CNhs12357.11731-123E316.93
Mouse Granule cells, donor3.CNhs12108.11636-122C719.01
Mouse Meningeal cells, donor1.CNhs12132.11716-123C614.91
Mouse Meningeal cells, donor3.CNhs12109.11639-122D118.68
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C713.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E712.86
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D214.92
Mouse Microglia, donor1.CNhs12629.11718-123C816.78
Mouse Microglia, donor2.CNhs12634.11736-123E814.60
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D516.38
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F519.58
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D918.72
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F127.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D526.50
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D216.29
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F218.02
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D617.47
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D319.82
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.73
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D718.28
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D812.50
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E417.31
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E522.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I618.95
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D624.16
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F621.07
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E121.81
Mouse Schwann, donor1.CNhs12507.11728-123D928.55
Mouse Schwann, donor2.CNhs12573.11746-123F913.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G312.46
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F743.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C486.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C860.45
Mouse hepatocyte, donor6.CNhs13090.11822-124F449.38
Mouse hepatocyte, donor8.CNhs13091.11824-124F652.42
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A720.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I716.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E323.38
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I823.32
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G613.10
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H124.38
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I828.03
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G123.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G222.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G321.23
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B625.35
accessory axillary lymph node, adult.CNhs10475.1063-29H928.22
adrenal gland, adult.CNhs10508.49-24D717.81
adrenal gland, embryo E14.CNhs11038.406-44C526.02
adrenal gland, embryo E16.CNhs11004.1254-43D619.18
adrenal gland, embryo E17.CNhs11043.1263-45I114.76
adrenal gland, embryo E18.CNhs11026.1262-18F514.62
adrenal gland, neonate N00.CNhs11191.1311-23C116.58
adrenal gland, neonate N25.CNhs11223.1377-27I320.11
amnion, adult pregnant day17.5.CNhs10488.583-22A820.02
aorta, adult.CNhs10498.46-23H128.78
bone (os femoris), adult.CNhs10483.56-12G215.04
bone (os femoris), neonate N02.CNhs11227.1985-43F514.40
bone (os femoris), neonate N16.CNhs11225.1525-43A616.34
bone (os femoris), neonate N20.CNhs11195.1350-25C315.52
cecum, adult.CNhs10467.37-13H414.91
cerebellum, adult.CNhs10494.15-8B217.27
cerebellum, neonate N30.CNhs11135.1395-42I214.45
colon, adult.CNhs10468.36-18H715.33
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C747.09
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D141.99
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D436.85
corpora quadrigemina, adult.CNhs10501.16-22A414.08
corpus striatum, adult.CNhs10487.19-21D819.67
corpus striatum, neonate N00.CNhs11226.630-43F119.35
cortex, adult.CNhs10473.12-14D513.38
cortex, neonate N30.CNhs11107.1392-42F29.72
diencephalon, adult.CNhs10482.20-12F213.51
diencephalon, neonate N30.CNhs11201.1388-42B214.44
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B115.58
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A214.06
epididymis, adult.CNhs10490.58-23B213.65
eyeball, adult.CNhs10484.31-12G422.73
eyeball, embryo E12.CNhs11016.345-16C618.61
eyeball, embryo E14.CNhs10521.399-16E220.46
eyeball, embryo E15.CNhs10593.426-16C914.59
eyeball, embryo E17.CNhs11023.1261-18D412.21
eyeball, neonate N00.CNhs11207.633-15C612.65
eyeball, neonate N01.CNhs11140.1532-43E713.71
eyeball, neonate N02.CNhs11205.1551-44G814.62
eyeball, neonate N16.CNhs11188.777-19A212.42
forelimb, embryo E11.CNhs10596.335-25E225.87
forelimb, embryo E12.CNhs10600.359-14H218.34
forelimb, embryo E13.CNhs10589.384-1E215.48
forelimb, embryo E14.CNhs10577.413-26A822.36
forelimb, embryo E15.CNhs11007.437-20E717.24
forelimb, embryo E17.CNhs10598.1517-43C414.28
forelimb, embryo E18.CNhs11008.1520-43B515.43
gonad, embryo E13.CNhs11044.1564-45I623.29
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C825.98
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D241.43
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D541.77
heart, embryo E11.CNhs10586.331-24E913.67
heart, embryo E12.CNhs11015.353-12F514.54
heart, embryo E13.CNhs11013.376-3I98.82
heart, embryo E14.CNhs10597.403-26D410.65
heart, embryo E15.CNhs11017.431-16C88.26
heart, embryo E16.CNhs11021.457-17C67.56
heart, embryo E17.CNhs11025.479-18E57.44
heart, embryo E18.CNhs11030.1283-20G37.78
heart, neonate N00.CNhs11213.639-21E37.36
heart, neonate N03.CNhs11221.1349-25I26.58
heart, neonate N10.CNhs11118.749-24G17.22
heart, neonate N16.CNhs11209.782-15G16.40
heart, neonate N20.CNhs11127.821-26I65.26
heart, neonate N25.CNhs11196.1351-25D310.76
heart, neonate N30.CNhs11202.1390-42D28.99
hippocampus, adult.CNhs10478.13-16E816.19
hippocampus, neonate N00.CNhs11228.627-43G114.51
intestinal mucosa, adult.CNhs10506.860-29I32.97
intestine, adult.CNhs10496.178-9A323.80
intestine, embryo E12.CNhs11019.1251-16I524.31
intestine, embryo E13.CNhs11010.381-16D523.92
intestine, embryo E15.CNhs10602.976-16D825.90
intestine, embryo E16.CNhs10585.463-22H422.19
intestine, embryo E17.CNhs10582.482-18D316.90
intestine, embryo E18.CNhs10526.1289-20F714.08
intestine, neonate N00.CNhs11126.644-26D121.35
intestine, neonate N01.CNhs11192.1322-23E917.46
intestine, neonate N06.CNhs11102.688-20B816.34
intestine, neonate N07.CNhs11095.720-20F212.73
intestine, neonate N10.CNhs11098.755-23A513.45
intestine, neonate N20.CNhs11187.827-18D118.88
intestine, neonate N25.CNhs11121.1352-25E312.97
intestine, neonate N30.CNhs11131.1384-42G114.14
kidney, embryo E14.CNhs10606.411-4I928.45
kidney, embryo E15.CNhs10997.434-16F822.05
kidney, embryo E16.CNhs10584.464-22A521.41
kidney, embryo E17.CNhs11028.483-18I219.55
kidney, embryo E18.CNhs11001.1288-20C718.04
kidney, neonate N00.CNhs11214.646-21G717.81
kidney, neonate N10.CNhs11206.758-6D512.08
kidney, neonate N20.CNhs11113.832-19I110.04
kidney, neonate N25.CNhs11122.1353-25F312.09
kidney, neonate N30.CNhs11203.1385-42H113.82
liver, adult pregnant day01.CNhs10466.508-5B253.36
liver, embryo E12.CNhs10601.355-15F833.54
liver, embryo E13.CNhs10524.378-3H637.74
liver, embryo E14.CNhs10594.409-16E136.65
liver, embryo E15.CNhs10520.433-16D731.85
liver, embryo E16.CNhs10523.462-17F533.76
liver, embryo E17.CNhs10510.481-18A327.50
liver, embryo E18.CNhs10579.499-43G432.22
liver, neonate N00.CNhs11117.641-24F453.99
liver, neonate N03.CNhs11123.1345-25G235.14
liver, neonate N06.CNhs11101.684-20A830.19
liver, neonate N07.CNhs11103.716-20H228.65
liver, neonate N10.CNhs11115.751-24B939.32
liver, neonate N20.CNhs11220.823-25A348.50
liver, neonate N25.CNhs11198.1368-26H141.26
liver, neonate N30.CNhs11106.1382-42D155.96
lung, adult.CNhs10474.28-22B112.01
lung, embryo E12.CNhs10522.354-16G220.28
lung, embryo E14.CNhs10604.404-26F821.84
lung, embryo E15.CNhs11020.432-17C520.54
lung, embryo E16.CNhs10998.458-17B613.61
lung, embryo E17.CNhs10605.480-44A612.40
lung, embryo E18.CNhs10583.1287-20I68.57
lung, neonate N00.CNhs11224.640-42C611.32
lung, neonate N06.CNhs11212.683-20E510.09
lung, neonate N07.CNhs11111.715-19A38.86
lung, neonate N10.CNhs11219.750-23E612.92
lung, neonate N20.CNhs11109.822-18A416.71
lung, neonate N25.CNhs11119.1359-25C717.44
lung, neonate N30.CNhs11133.1394-42H217.79
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A112.06
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A115.23
mammary gland, adult lactating day02.CNhs10480.595-22B628.03
mammary gland, adult pregnant day19.CNhs10476.588-5H230.08
medulla oblongata, adult.CNhs10477.17-12C211.40
medulla oblongata, neonate N30.CNhs11200.1396-42A313.36
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C731.64
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C218.43
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E117.04
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E214.45
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E315.30
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D717.92
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D816.93
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D918.40
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D412.55
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D512.27
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.46
olfactory brain, adult.CNhs10489.18-22I923.14
ovary, adult.CNhs10507.91-2I720.16
ovary, embryo E18.CNhs11040.505-44H719.59
ovary, neonate N00.CNhs11217.1299-22I417.43
oviduct, adult pregnant day01.CNhs10500.988-6G623.76
pancreas, adult.CNhs10486.34-16E425.22
pancreas, embryo E14.CNhs11012.405-44F426.95
pancreas, embryo E15.CNhs11042.1556-45F232.35
pancreas, embryo E16.CNhs11003.460-26E523.58
pancreas, embryo E17.CNhs10599.1558-45G321.56
pancreas, embryo E18.CNhs10580.1535-43I722.44
pancreas, neonate N00.CNhs11105.645-26G927.13
pancreas, neonate N01.CNhs11138.1531-43D721.45
pancreas, neonate N02.CNhs11139.1539-43D819.96
pancreas, neonate N16.CNhs11136.787-43B630.02
pancreas, neonate N25.CNhs11094.1555-45E225.30
pancreas, neonate N30.CNhs11182.1548-44H520.63
pituitary gland, adult.CNhs10493.21-1G820.09
pituitary gland, embryo E12.CNhs11018.346-16E617.47
pituitary gland, embryo E13.CNhs11009.370-44C717.72
pituitary gland, embryo E14.CNhs11037.398-44A515.43
pituitary gland, embryo E15.CNhs10592.427-16B913.66
pituitary gland, embryo E16.CNhs11036.449-43F615.52
pituitary gland, embryo E17.CNhs11039.1265-44F513.49
pituitary gland, neonate N00.CNhs11190.1308-22E917.05
placenta, adult pregnant day10.CNhs10472.539-13I723.23
placenta, adult pregnant day17.CNhs10464.577-18G314.62
prostate, adult.CNhs10470.859-1F818.08
skin, adult.CNhs10492.30-1C318.80
skin, neonate N00.CNhs11124.650-25G424.06
skin, neonate N03.CNhs11215.662-22H319.12
skin, neonate N06.CNhs11097.693-20I519.82
skin, neonate N10.CNhs11108.762-6C416.58
small intestine, neonate N16.CNhs11114.790-21I115.74
spinal cord, adult.CNhs10505.24-13C913.91
spleen, adult.CNhs10465.25-2G219.82
spleen, embryo E16.CNhs11035.461-43C115.69
spleen, embryo E18.CNhs11011.1271-21F222.22
spleen, neonate N10.CNhs11116.752-24D120.34
spleen, neonate N20.CNhs11112.824-19H119.27
spleen, neonate N25.CNhs11099.1354-25G325.62
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C647.25
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C944.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D344.09
stomach, adult.CNhs10503.33-1H69.55
stomach, embryo E12.CNhs10588.356-43E318.19
stomach, embryo E15.CNhs10603.1252-16G818.71
stomach, embryo E16.CNhs11022.459-17D420.31
stomach, embryo E17.CNhs11006.1035-18D520.07
stomach, embryo E18.CNhs10999.1286-20C617.69
stomach, neonate N03.CNhs11193.1340-24B815.10
stomach, neonate N07.CNhs11210.718-18A914.79
stomach, neonate N25.CNhs11104.1355-25E410.47
stomach, neonate N30.CNhs11134.1386-42I113.09
submandibular gland, adult.CNhs10469.59-29C116.15
testis, adult.CNhs10504.57-7G510.15
testis, embryo E13.CNhs11031.389-23F520.18
testis, embryo E15.CNhs11034.443-27C523.00
testis, embryo E16.CNhs11033.470-26G517.50
testis, embryo E17.CNhs11029.486-18I520.15
testis, embryo E18.CNhs11027.503-18G516.56
testis, neonate N00.CNhs11189.1300-22B716.90
testis, neonate N07.CNhs11222.726-26I420.31
testis, neonate N10.CNhs11204.763-44D924.43
testis, neonate N20.CNhs11110.839-18H314.50
testis, neonate N30.CNhs11130.1391-42E29.79
thymus, adult.CNhs10471.38-12B511.06
thymus, embryo E14.CNhs11041.402-44I435.48
thymus, embryo E15.CNhs11005.430-45I227.01
thymus, embryo E16.CNhs11002.456-26C525.85
thymus, embryo E17.CNhs10581.478-18C122.56
thymus, embryo E18.CNhs10595.1273-19G417.48
thymus, neonate N02.CNhs11181.1541-43F819.35
thymus, neonate N03.CNhs11137.2104-43C716.69
thymus, neonate N06.CNhs11197.681-26C417.77
thymus, neonate N07.CNhs11211.713-19D315.93
thymus, neonate N10.CNhs11194.748-24E415.53
thymus, neonate N20.CNhs11186.820-7A215.50
thymus, neonate N25.CNhs11125.1362-25G715.87
thymus, neonate N30.CNhs11132.1393-42G215.19
tongue, adult.CNhs10499.32-1B417.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H346.40
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F762.62
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G536.77
urinary bladder, adult.CNhs10481.879-12E415.26
uterus, adult pregnant day19.CNhs10497.590-15F523.65
uterus, adult.CNhs10509.92-27E527.47
vagina, adult.CNhs10502.89-27D513.72
vesicular gland, adult.CNhs10491.51-27F819.06
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A18.47
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A213.81
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.75
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D717.70
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A514.35
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.85
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A716.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.05
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.94
whole body, embryo E11.CNhs11014.324-5I824.18
whole body, embryo E12.CNhs10587.857-27C915.96
whole body, embryo E13.CNhs10512.372-23H220.66
whole body, embryo E14.5.CNhs10578.420-27D218.96
whole body, embryo E14.CNhs10519.395-14B124.52
whole body, embryo E16.CNhs10514.453-14F225.19
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G515.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G516.48
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G514.12
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G514.91
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G516.73
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G515.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G516.01
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G514.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G515.28
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G512.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G517.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G517.36
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G521.02
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G514.72
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G512.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G518.63
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G516.21
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G517.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G517.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G515.82
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G519.39
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G518.94
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G513.72
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G520.76
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G517.91
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G515.76
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G521.69
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G521.38
whole body, embryo E17.5.CNhs10513.490-9F915.43
whole body, embryo E17.CNhs10517.475-3I513.74
whole body, embryo E18.CNhs10516.493-3B315.21
whole body, neonate N00.CNhs10525.657-19C218.91
whole body, neonate N01.CNhs10576.659-23C624.48
whole body, neonate N06.CNhs10515.692-21D114.56
whole body, neonate N10.CNhs10518.761-6B416.69





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr19:29175877..29175928,%2B&oldid=866653"