Personal tools

FFCP PHASE1:Mm9::chr2:71711335..71711383,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr2:71711335..71711383,+
|short_description=p1@Pdk1
|description=CAGE_peak_1_at_Pdk1_5end
|association_with_transcript=0bp_to_ENSMUST00000134362,ENSMUST00000152696_5end
|EntrezGene=228026
|EntrezGene=228026
|HGNC=
|HGNC=
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000134362,ENSMUST00000152696_5end
|description=CAGE_peak_1_at_Pdk1_5end
|id=chr2:71711335..71711383,+
|ontology_enrichment_disease=
|phase1_expression=18.0968197228417,6.63053274514786,9.55498402718026,26.616850595001,19.0340377379612,13.0945832091274,18.4553986070465,11.2337291394171,11.403886494285,3.97909694747389,15.0671812038444,9.57265907944037,134.563773725928,23.1664066410343,36.6420737997229,27.7391116324062,39.1754651751762,29.0225192129579,35.3755238702806,20.7950929381035,12.5013636522073,30.4823220186718,26.6423784921714,15.9992422793407,14.2233754261645,8.03924749761028,14.2151458732495,12.2818602630957,18.4322716872683,19.4063199915147,9.3126814475228,43.1820857952549,38.7490816178279,110.937176710807,31.1959749331377,27.7611857748682,31.4420808644048,5.02237956884289,2.3440060335714,2.09409497589519,0.588231488031014,3.41522742479223,0.971020706062307,14.604030885167,15.3079166141467,13.7660064121261,6.25913075478431,4.79655344036982,6.37089929929968,8.74934545834275,16.6583841734181,4.31257693094915,15.7715649694272,103.001424165611,83.6873559864735,16.4646039063006,11.747871037489,14.9544906760458,11.3297218081375,13.7537654610729,17.1134478946668,4.74382344896785,9.78224275722253,23.3973926493164,20.7661936139065,21.314403448383,15.2796056364386,15.7529505181837,11.6132365785495,12.0155285115205,10.0955981448663,33.421165175245,23.1911967999194,11.5141351262057,8.33855597858656,14.7075005857603,18.7196997698961,20.0469120793745,19.0472101237742,11.2103344570665,14.3635600455783,10.939180781692,18.1468949350898,25.8870800614573,21.0861581931998,27.1058298635774,21.2133804390663,13.9799584368975,2.65041676666144,3.02286240427142,28.1168554040627,36.1378028332182,44.1981366910038,76.63785321257,86.42026352054,142.92057698405,32.0213277900394,28.9731548382698,30.1351765339328,36.7473157490754,12.5350643601246,17.9657068380045,7.64415719119937,7.11066703153331,44.5971544483101,37.7506199557897,39.4309067111531,33.3416928779655,27.4474156666002,13.0629082377046,17.5220180033797,19.7902560902892,17.0655467969483,18.8403300690778,21.1659672844269,26.3899841792318,14.8316980640624,40.0540218668155,12.3845477272982,26.3679965414277,20.9799442537374,17.455509112868,35.4144346314432,7.61230072230023,9.42510180660548,22.7356779135646,31.3915626205511,14.3976655438418,22.2372897377863,15.8778077769112,12.8100168789215,11.3088916901578,33.5480937971094,30.4301394223093,12.8828587626927,18.4955039897244,13.6464747559424,24.5081732101883,55.5990068554084,53.6626732510509,14.5734896118228,14.9436367881757,25.0286360429435,23.5099515823715,14.0835553243249,17.1672385181699,18.9277483610652,32.0792179716379,13.5807835547691,19.856138417621,22.6976950171494,28.9338366804399,30.5851974148158,43.1832686487487,36.217656007798,21.6947350832158,18.2575428701441,22.3892679189802,26.1430419443945,52.1956946789465,42.6837429165595,49.8771910247011,73.8643575025856,67.4901314893595,72.0427417184057,76.0385999333834,105.163173348651,71.1100935016062,39.1652442794083,40.2210286993783,46.8577719175046,49.269395762337,50.7160766322327,51.5352648039828,27.3376933133365,13.1717903845484,13.2167513193519,24.8583532663732,15.3567540385368,18.8111704206955,34.2787447116768,29.2441110703847,31.1329261382818,19.9736907418187,13.7613427847908,10.5407331023367,13.3207660664143,13.7279965708394,15.2071987952914,18.8752075817387,13.400559092231,18.1218558661474,18.9667900953082,15.8805432527523,18.0332377076929,22.8089487186752,33.3598277928316,16.1312385747733,25.9269802209455,23.7652338247159,28.5737684671302,28.0111562102487,64.0337674508242,44.7144883319132,34.2012651496973,40.2503181168888,45.2378070696361,41.0001171579109,37.1753743600873,56.6761390778097,28.6979351391813,20.8666674022942,40.2550978276593,23.0727387554472,15.601883655728,23.9949934049756,44.3111611399123,24.1221760681684,15.1497615936616,16.6752442358027,22.8150967018836,17.3139987490692,18.7752198630802,23.4508760418542,29.9934987516377,15.0252908850505,8.82756806994669,8.858587585951,9.24837658213425,10.651115456523,12.4333186943445,13.1630643309176,16.5870412333199,18.4927932498361,59.9952413083224,30.6289788398253,16.8578119487182,11.7211686592203,24.4263068611246,37.3656972262472,13.2513452154828,11.3227235846025,18.7418356027535,6.4521575447189,14.9275111635204,28.0245765480944,2.83367491172426,9.9366991689846,14.6256477840214,21.2072068838393,14.0520684356186,35.613120733451,17.2660176914791,12.7026994688852,73.0098260869796,28.4053344301328,27.8137672407571,56.5815239267694,45.7717933965198,58.7201132572901,20.1574068671212,28.3556308992454,28.5197902707777,51.8300283014738,59.0344208019993,78.383012868622,21.7881347682424,15.8453762747553,17.3340636268891,23.5770738534752,23.2315706071378,19.0854634834215,24.517804069716,16.4411072521884,11.7335854031855,36.0114520468494,18.3038570385618,41.551335741253,30.1938477921343,17.5510611540934,20.0545537925269,22.9797259643086,16.0314460146418,12.9797711407357,17.5997007221788,27.2430665711454,32.779431344439,22.7925832975676,20.7775226135958,15.328137604837,28.8963330989554,23.2319410857272,20.4535961230547,17.184071124272,16.1331356726379,29.0746837991394,23.3291536175091,27.5996550739099,27.9504081595107,18.4764154547204,18.8449879053766,21.2022313007064,24.4972299521489,29.2029477150855,9.01908701894705,20.6332833540691,16.7113075361669,14.7782903141476,16.1449779347164,18.7541299294764,12.4398672964499,18.7494314175288,29.2557570947733,18.3603931827765,15.2655903316669,51.5098126623931,23.1106745430787,25.8831612055365,25.4644813036478,25.4217907847824,32.7824235389087,15.264822089036,19.6427071142188,16.1546319917036,22.55721476988,22.1817607301049,29.0424484604462,30.3067301167038,47.1013915791723,29.9284106372079,23.5305110576509,12.2010844988887,18.2994231836845,27.432922352571,16.1406928888016,15.9341913112521,30.0115730710692,17.0534515372024,37.8383734553435,33.1434170285167,32.6550442660456,52.243367432481,54.1215190618807,56.6545423042275,42.5264175146038,47.7340475417674,49.3925225792783,37.278742446131,20.1347454313303,19.5522187966505,17.0733605754134,34.764260540766,35.005398158873,50.5569648237539,42.6713717379101,44.9156424780789,35.3011130550997,47.0016813880663,48.4145462790358,38.8570263255317,44.6669990631339,41.0401226915212,37.5053612280155,47.1530754370243,37.5465216061332,35.302387344858,38.7360746755108,48.2812458040823,40.1157025290936,34.4303063949115,35.5269923021508,46.5108533223451,46.8664714468346,39.5150218854129,39.5124421405189,35.5144110441088,35.9880901691534,52.1862312641697,39.6240960534742,35.1661002080762,42.150797446478,41.5230734378389,42.4394544158511,26.7297318393602,41.8737579117281,34.8091107558243,41.509568058939,31.1033900958517,33.6208361649611
|phase1_expression=18.0968197228417,6.63053274514786,9.55498402718026,26.616850595001,19.0340377379612,13.0945832091274,18.4553986070465,11.2337291394171,11.403886494285,3.97909694747389,15.0671812038444,9.57265907944037,134.563773725928,23.1664066410343,36.6420737997229,27.7391116324062,39.1754651751762,29.0225192129579,35.3755238702806,20.7950929381035,12.5013636522073,30.4823220186718,26.6423784921714,15.9992422793407,14.2233754261645,8.03924749761028,14.2151458732495,12.2818602630957,18.4322716872683,19.4063199915147,9.3126814475228,43.1820857952549,38.7490816178279,110.937176710807,31.1959749331377,27.7611857748682,31.4420808644048,5.02237956884289,2.3440060335714,2.09409497589519,0.588231488031014,3.41522742479223,0.971020706062307,14.604030885167,15.3079166141467,13.7660064121261,6.25913075478431,4.79655344036982,6.37089929929968,8.74934545834275,16.6583841734181,4.31257693094915,15.7715649694272,103.001424165611,83.6873559864735,16.4646039063006,11.747871037489,14.9544906760458,11.3297218081375,13.7537654610729,17.1134478946668,4.74382344896785,9.78224275722253,23.3973926493164,20.7661936139065,21.314403448383,15.2796056364386,15.7529505181837,11.6132365785495,12.0155285115205,10.0955981448663,33.421165175245,23.1911967999194,11.5141351262057,8.33855597858656,14.7075005857603,18.7196997698961,20.0469120793745,19.0472101237742,11.2103344570665,14.3635600455783,10.939180781692,18.1468949350898,25.8870800614573,21.0861581931998,27.1058298635774,21.2133804390663,13.9799584368975,2.65041676666144,3.02286240427142,28.1168554040627,36.1378028332182,44.1981366910038,76.63785321257,86.42026352054,142.92057698405,32.0213277900394,28.9731548382698,30.1351765339328,36.7473157490754,12.5350643601246,17.9657068380045,7.64415719119937,7.11066703153331,44.5971544483101,37.7506199557897,39.4309067111531,33.3416928779655,27.4474156666002,13.0629082377046,17.5220180033797,19.7902560902892,17.0655467969483,18.8403300690778,21.1659672844269,26.3899841792318,14.8316980640624,40.0540218668155,12.3845477272982,26.3679965414277,20.9799442537374,17.455509112868,35.4144346314432,7.61230072230023,9.42510180660548,22.7356779135646,31.3915626205511,14.3976655438418,22.2372897377863,15.8778077769112,12.8100168789215,11.3088916901578,33.5480937971094,30.4301394223093,12.8828587626927,18.4955039897244,13.6464747559424,24.5081732101883,55.5990068554084,53.6626732510509,14.5734896118228,14.9436367881757,25.0286360429435,23.5099515823715,14.0835553243249,17.1672385181699,18.9277483610652,32.0792179716379,13.5807835547691,19.856138417621,22.6976950171494,28.9338366804399,30.5851974148158,43.1832686487487,36.217656007798,21.6947350832158,18.2575428701441,22.3892679189802,26.1430419443945,52.1956946789465,42.6837429165595,49.8771910247011,73.8643575025856,67.4901314893595,72.0427417184057,76.0385999333834,105.163173348651,71.1100935016062,39.1652442794083,40.2210286993783,46.8577719175046,49.269395762337,50.7160766322327,51.5352648039828,27.3376933133365,13.1717903845484,13.2167513193519,24.8583532663732,15.3567540385368,18.8111704206955,34.2787447116768,29.2441110703847,31.1329261382818,19.9736907418187,13.7613427847908,10.5407331023367,13.3207660664143,13.7279965708394,15.2071987952914,18.8752075817387,13.400559092231,18.1218558661474,18.9667900953082,15.8805432527523,18.0332377076929,22.8089487186752,33.3598277928316,16.1312385747733,25.9269802209455,23.7652338247159,28.5737684671302,28.0111562102487,64.0337674508242,44.7144883319132,34.2012651496973,40.2503181168888,45.2378070696361,41.0001171579109,37.1753743600873,56.6761390778097,28.6979351391813,20.8666674022942,40.2550978276593,23.0727387554472,15.601883655728,23.9949934049756,44.3111611399123,24.1221760681684,15.1497615936616,16.6752442358027,22.8150967018836,17.3139987490692,18.7752198630802,23.4508760418542,29.9934987516377,15.0252908850505,8.82756806994669,8.858587585951,9.24837658213425,10.651115456523,12.4333186943445,13.1630643309176,16.5870412333199,18.4927932498361,59.9952413083224,30.6289788398253,16.8578119487182,11.7211686592203,24.4263068611246,37.3656972262472,13.2513452154828,11.3227235846025,18.7418356027535,6.4521575447189,14.9275111635204,28.0245765480944,2.83367491172426,9.9366991689846,14.6256477840214,21.2072068838393,14.0520684356186,35.613120733451,17.2660176914791,12.7026994688852,73.0098260869796,28.4053344301328,27.8137672407571,56.5815239267694,45.7717933965198,58.7201132572901,20.1574068671212,28.3556308992454,28.5197902707777,51.8300283014738,59.0344208019993,78.383012868622,21.7881347682424,15.8453762747553,17.3340636268891,23.5770738534752,23.2315706071378,19.0854634834215,24.517804069716,16.4411072521884,11.7335854031855,36.0114520468494,18.3038570385618,41.551335741253,30.1938477921343,17.5510611540934,20.0545537925269,22.9797259643086,16.0314460146418,12.9797711407357,17.5997007221788,27.2430665711454,32.779431344439,22.7925832975676,20.7775226135958,15.328137604837,28.8963330989554,23.2319410857272,20.4535961230547,17.184071124272,16.1331356726379,29.0746837991394,23.3291536175091,27.5996550739099,27.9504081595107,18.4764154547204,18.8449879053766,21.2022313007064,24.4972299521489,29.2029477150855,9.01908701894705,20.6332833540691,16.7113075361669,14.7782903141476,16.1449779347164,18.7541299294764,12.4398672964499,18.7494314175288,29.2557570947733,18.3603931827765,15.2655903316669,51.5098126623931,23.1106745430787,25.8831612055365,25.4644813036478,25.4217907847824,32.7824235389087,15.264822089036,19.6427071142188,16.1546319917036,22.55721476988,22.1817607301049,29.0424484604462,30.3067301167038,47.1013915791723,29.9284106372079,23.5305110576509,12.2010844988887,18.2994231836845,27.432922352571,16.1406928888016,15.9341913112521,30.0115730710692,17.0534515372024,37.8383734553435,33.1434170285167,32.6550442660456,52.243367432481,54.1215190618807,56.6545423042275,42.5264175146038,47.7340475417674,49.3925225792783,37.278742446131,20.1347454313303,19.5522187966505,17.0733605754134,34.764260540766,35.005398158873,50.5569648237539,42.6713717379101,44.9156424780789,35.3011130550997,47.0016813880663,48.4145462790358,38.8570263255317,44.6669990631339,41.0401226915212,37.5053612280155,47.1530754370243,37.5465216061332,35.302387344858,38.7360746755108,48.2812458040823,40.1157025290936,34.4303063949115,35.5269923021508,46.5108533223451,46.8664714468346,39.5150218854129,39.5124421405189,35.5144110441088,35.9880901691534,52.1862312641697,39.6240960534742,35.1661002080762,42.150797446478,41.5230734378389,42.4394544158511,26.7297318393602,41.8737579117281,34.8091107558243,41.509568058939,31.1033900958517,33.6208361649611
|short_description=p1@Pdk1
}}
}}

Revision as of 10:41, 18 April 2012

Short description:p1@Pdk1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pdk1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000134362, ENSMUST00000152696_5end
EntrezGene:Pdk1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pdk1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G718.10
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.63
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I69.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I326.62
CD326+ enterocyte, pool2.CNhs13197.11849-124I419.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I713.09
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I818.46
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E911.23
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E711.40
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.98
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E615.07
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F19.57
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4134.56
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E823.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A136.64
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A327.74
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A539.18
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A229.02
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A435.38
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A620.80
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H230.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I926.64
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D116.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D214.22
GP2+ M cell, pool1.CNhs13228.11845-124H98.04
GP2+ M cell, pool2.CNhs13231.11846-124I114.22
GP2+ M cell, pool3.CNhs13240.11847-124I212.28
Ileum epithelium, pool1.CNhs13199.10252-104B918.43
Ileum epithelium, pool2.CNhs13232.10253-104C119.41
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C89.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I343.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G638.75
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9110.94
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F531.20
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F627.76
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F731.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D814.60
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D915.31
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B313.77
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.80
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.37
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C416.66
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A215.77
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9103.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A183.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C116.46
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E111.75
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C514.95
Mouse Granule cells, donor1.CNhs12131.11713-123C311.33
Mouse Granule cells, donor2.CNhs12357.11731-123E313.75
Mouse Granule cells, donor3.CNhs12108.11636-122C717.11
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.74
Mouse Meningeal cells, donor3.CNhs12109.11639-122D19.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C723.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E720.77
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D221.31
Mouse Microglia, donor1.CNhs12629.11718-123C815.28
Mouse Microglia, donor2.CNhs12634.11736-123E815.75
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D511.61
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F512.02
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F133.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D523.19
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D211.51
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D318.72
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F320.05
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D719.05
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.21
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.36
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.94
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E418.15
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E525.89
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I621.09
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D627.11
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F621.21
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.98
Mouse Schwann, donor1.CNhs12507.11728-123D92.65
Mouse Schwann, donor2.CNhs12573.11746-123F93.02
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G328.12
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F736.14
Mouse hepatocyte, donor1.CNhs13078.11714-123C444.20
Mouse hepatocyte, donor3.CNhs12615.11637-122C876.64
Mouse hepatocyte, donor6.CNhs13090.11822-124F486.42
Mouse hepatocyte, donor8.CNhs13091.11824-124F6142.92
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A732.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I728.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E330.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I836.75
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G612.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H117.97
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G144.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G237.75
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G339.43
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B633.34
accessory axillary lymph node, adult.CNhs10475.1063-29H927.45
adrenal gland, adult.CNhs10508.49-24D713.06
adrenal gland, embryo E14.CNhs11038.406-44C517.52
adrenal gland, embryo E16.CNhs11004.1254-43D619.79
adrenal gland, embryo E17.CNhs11043.1263-45I117.07
adrenal gland, embryo E18.CNhs11026.1262-18F518.84
adrenal gland, neonate N00.CNhs11191.1311-23C121.17
adrenal gland, neonate N25.CNhs11223.1377-27I326.39
amnion, adult pregnant day17.5.CNhs10488.583-22A814.83
aorta, adult.CNhs10498.46-23H140.05
bone (os femoris), adult.CNhs10483.56-12G212.38
bone (os femoris), neonate N02.CNhs11227.1985-43F526.37
bone (os femoris), neonate N16.CNhs11225.1525-43A620.98
bone (os femoris), neonate N20.CNhs11195.1350-25C317.46
cecum, adult.CNhs10467.37-13H435.41
cerebellum, adult.CNhs10494.15-8B27.61
cerebellum, neonate N30.CNhs11135.1395-42I29.43
colon, adult.CNhs10468.36-18H722.74
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C731.39
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D114.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D422.24
corpora quadrigemina, adult.CNhs10501.16-22A415.88
corpus striatum, adult.CNhs10487.19-21D812.81
corpus striatum, neonate N00.CNhs11226.630-43F111.31
cortex, adult.CNhs10473.12-14D533.55
cortex, neonate N30.CNhs11107.1392-42F230.43
diencephalon, adult.CNhs10482.20-12F212.88
diencephalon, neonate N30.CNhs11201.1388-42B218.50
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B113.65
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A224.51
epididymis, adult.CNhs10490.58-23B255.60
eyeball, adult.CNhs10484.31-12G453.66
eyeball, embryo E12.CNhs11016.345-16C614.57
eyeball, embryo E14.CNhs10521.399-16E214.94
eyeball, embryo E15.CNhs10593.426-16C925.03
eyeball, embryo E17.CNhs11023.1261-18D423.51
eyeball, neonate N00.CNhs11207.633-15C614.08
eyeball, neonate N01.CNhs11140.1532-43E717.17
eyeball, neonate N02.CNhs11205.1551-44G818.93
eyeball, neonate N16.CNhs11188.777-19A232.08
forelimb, embryo E11.CNhs10596.335-25E213.58
forelimb, embryo E12.CNhs10600.359-14H219.86
forelimb, embryo E13.CNhs10589.384-1E222.70
forelimb, embryo E14.CNhs10577.413-26A828.93
forelimb, embryo E15.CNhs11007.437-20E730.59
forelimb, embryo E17.CNhs10598.1517-43C443.18
forelimb, embryo E18.CNhs11008.1520-43B536.22
gonad, embryo E13.CNhs11044.1564-45I621.69
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C818.26
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D222.39
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D526.14
heart, embryo E11.CNhs10586.331-24E952.20
heart, embryo E12.CNhs11015.353-12F542.68
heart, embryo E13.CNhs11013.376-3I949.88
heart, embryo E14.CNhs10597.403-26D473.86
heart, embryo E15.CNhs11017.431-16C867.49
heart, embryo E16.CNhs11021.457-17C672.04
heart, embryo E17.CNhs11025.479-18E576.04
heart, embryo E18.CNhs11030.1283-20G3105.16
heart, neonate N00.CNhs11213.639-21E371.11
heart, neonate N03.CNhs11221.1349-25I239.17
heart, neonate N10.CNhs11118.749-24G140.22
heart, neonate N16.CNhs11209.782-15G146.86
heart, neonate N20.CNhs11127.821-26I649.27
heart, neonate N25.CNhs11196.1351-25D350.72
heart, neonate N30.CNhs11202.1390-42D251.54
hippocampus, adult.CNhs10478.13-16E827.34
hippocampus, neonate N00.CNhs11228.627-43G113.17
intestinal mucosa, adult.CNhs10506.860-29I313.22
intestine, adult.CNhs10496.178-9A324.86
intestine, embryo E12.CNhs11019.1251-16I515.36
intestine, embryo E13.CNhs11010.381-16D518.81
intestine, embryo E15.CNhs10602.976-16D834.28
intestine, embryo E16.CNhs10585.463-22H429.24
intestine, embryo E17.CNhs10582.482-18D331.13
intestine, embryo E18.CNhs10526.1289-20F719.97
intestine, neonate N00.CNhs11126.644-26D113.76
intestine, neonate N01.CNhs11192.1322-23E910.54
intestine, neonate N06.CNhs11102.688-20B813.32
intestine, neonate N07.CNhs11095.720-20F213.73
intestine, neonate N10.CNhs11098.755-23A515.21
intestine, neonate N20.CNhs11187.827-18D118.88
intestine, neonate N25.CNhs11121.1352-25E313.40
intestine, neonate N30.CNhs11131.1384-42G118.12
kidney, embryo E14.CNhs10606.411-4I918.97
kidney, embryo E15.CNhs10997.434-16F815.88
kidney, embryo E16.CNhs10584.464-22A518.03
kidney, embryo E17.CNhs11028.483-18I222.81
kidney, embryo E18.CNhs11001.1288-20C733.36
kidney, neonate N00.CNhs11214.646-21G716.13
kidney, neonate N10.CNhs11206.758-6D525.93
kidney, neonate N20.CNhs11113.832-19I123.77
kidney, neonate N25.CNhs11122.1353-25F328.57
kidney, neonate N30.CNhs11203.1385-42H128.01
liver, adult pregnant day01.CNhs10466.508-5B264.03
liver, embryo E12.CNhs10601.355-15F844.71
liver, embryo E13.CNhs10524.378-3H634.20
liver, embryo E14.CNhs10594.409-16E140.25
liver, embryo E15.CNhs10520.433-16D745.24
liver, embryo E16.CNhs10523.462-17F541.00
liver, embryo E17.CNhs10510.481-18A337.18
liver, embryo E18.CNhs10579.499-43G456.68
liver, neonate N00.CNhs11117.641-24F428.70
liver, neonate N03.CNhs11123.1345-25G220.87
liver, neonate N06.CNhs11101.684-20A840.26
liver, neonate N07.CNhs11103.716-20H223.07
liver, neonate N10.CNhs11115.751-24B915.60
liver, neonate N20.CNhs11220.823-25A323.99
liver, neonate N25.CNhs11198.1368-26H144.31
liver, neonate N30.CNhs11106.1382-42D124.12
lung, adult.CNhs10474.28-22B115.15
lung, embryo E12.CNhs10522.354-16G216.68
lung, embryo E14.CNhs10604.404-26F822.82
lung, embryo E15.CNhs11020.432-17C517.31
lung, embryo E16.CNhs10998.458-17B618.78
lung, embryo E17.CNhs10605.480-44A623.45
lung, embryo E18.CNhs10583.1287-20I629.99
lung, neonate N00.CNhs11224.640-42C615.03
lung, neonate N06.CNhs11212.683-20E58.83
lung, neonate N07.CNhs11111.715-19A38.86
lung, neonate N10.CNhs11219.750-23E69.25
lung, neonate N20.CNhs11109.822-18A410.65
lung, neonate N25.CNhs11119.1359-25C712.43
lung, neonate N30.CNhs11133.1394-42H213.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A116.59
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A118.49
mammary gland, adult lactating day02.CNhs10480.595-22B660.00
mammary gland, adult pregnant day19.CNhs10476.588-5H230.63
medulla oblongata, adult.CNhs10477.17-12C216.86
medulla oblongata, neonate N30.CNhs11200.1396-42A311.72
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C724.43
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C237.37
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E113.25
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E211.32
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E318.74
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.45
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D814.93
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D928.02
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.94
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D614.63
olfactory brain, adult.CNhs10489.18-22I921.21
ovary, adult.CNhs10507.91-2I714.05
ovary, embryo E18.CNhs11040.505-44H735.61
ovary, neonate N00.CNhs11217.1299-22I417.27
oviduct, adult pregnant day01.CNhs10500.988-6G612.70
pancreas, adult.CNhs10486.34-16E473.01
pancreas, embryo E14.CNhs11012.405-44F428.41
pancreas, embryo E15.CNhs11042.1556-45F227.81
pancreas, embryo E16.CNhs11003.460-26E556.58
pancreas, embryo E17.CNhs10599.1558-45G345.77
pancreas, embryo E18.CNhs10580.1535-43I758.72
pancreas, neonate N00.CNhs11105.645-26G920.16
pancreas, neonate N01.CNhs11138.1531-43D728.36
pancreas, neonate N02.CNhs11139.1539-43D828.52
pancreas, neonate N16.CNhs11136.787-43B651.83
pancreas, neonate N25.CNhs11094.1555-45E259.03
pancreas, neonate N30.CNhs11182.1548-44H578.38
pituitary gland, adult.CNhs10493.21-1G821.79
pituitary gland, embryo E12.CNhs11018.346-16E615.85
pituitary gland, embryo E13.CNhs11009.370-44C717.33
pituitary gland, embryo E14.CNhs11037.398-44A523.58
pituitary gland, embryo E15.CNhs10592.427-16B923.23
pituitary gland, embryo E16.CNhs11036.449-43F619.09
pituitary gland, embryo E17.CNhs11039.1265-44F524.52
pituitary gland, neonate N00.CNhs11190.1308-22E916.44
placenta, adult pregnant day10.CNhs10472.539-13I711.73
placenta, adult pregnant day17.CNhs10464.577-18G336.01
prostate, adult.CNhs10470.859-1F818.30
skin, adult.CNhs10492.30-1C341.55
skin, neonate N00.CNhs11124.650-25G430.19
skin, neonate N03.CNhs11215.662-22H317.55
skin, neonate N06.CNhs11097.693-20I520.05
skin, neonate N10.CNhs11108.762-6C422.98
small intestine, neonate N16.CNhs11114.790-21I116.03
spinal cord, adult.CNhs10505.24-13C912.98
spleen, adult.CNhs10465.25-2G217.60
spleen, embryo E16.CNhs11035.461-43C127.24
spleen, embryo E18.CNhs11011.1271-21F232.78
spleen, neonate N10.CNhs11116.752-24D122.79
spleen, neonate N20.CNhs11112.824-19H120.78
spleen, neonate N25.CNhs11099.1354-25G315.33
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C628.90
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C923.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D320.45
stomach, adult.CNhs10503.33-1H617.18
stomach, embryo E12.CNhs10588.356-43E316.13
stomach, embryo E15.CNhs10603.1252-16G829.07
stomach, embryo E16.CNhs11022.459-17D423.33
stomach, embryo E17.CNhs11006.1035-18D527.60
stomach, embryo E18.CNhs10999.1286-20C627.95
stomach, neonate N03.CNhs11193.1340-24B818.48
stomach, neonate N07.CNhs11210.718-18A918.84
stomach, neonate N25.CNhs11104.1355-25E421.20
stomach, neonate N30.CNhs11134.1386-42I124.50
submandibular gland, adult.CNhs10469.59-29C129.20
testis, adult.CNhs10504.57-7G59.02
testis, embryo E13.CNhs11031.389-23F520.63
testis, embryo E15.CNhs11034.443-27C516.71
testis, embryo E16.CNhs11033.470-26G514.78
testis, embryo E17.CNhs11029.486-18I516.14
testis, embryo E18.CNhs11027.503-18G518.75
testis, neonate N00.CNhs11189.1300-22B712.44
testis, neonate N07.CNhs11222.726-26I418.75
testis, neonate N10.CNhs11204.763-44D929.26
testis, neonate N20.CNhs11110.839-18H318.36
testis, neonate N30.CNhs11130.1391-42E215.27
thymus, adult.CNhs10471.38-12B551.51
thymus, embryo E14.CNhs11041.402-44I423.11
thymus, embryo E15.CNhs11005.430-45I225.88
thymus, embryo E16.CNhs11002.456-26C525.46
thymus, embryo E17.CNhs10581.478-18C125.42
thymus, embryo E18.CNhs10595.1273-19G432.78
thymus, neonate N02.CNhs11181.1541-43F815.26
thymus, neonate N03.CNhs11137.2104-43C719.64
thymus, neonate N06.CNhs11197.681-26C416.15
thymus, neonate N07.CNhs11211.713-19D322.56
thymus, neonate N10.CNhs11194.748-24E422.18
thymus, neonate N20.CNhs11186.820-7A229.04
thymus, neonate N25.CNhs11125.1362-25G730.31
thymus, neonate N30.CNhs11132.1393-42G247.10
tongue, adult.CNhs10499.32-1B429.93
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H323.53
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F712.20
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G518.30
urinary bladder, adult.CNhs10481.879-12E427.43
uterus, adult pregnant day19.CNhs10497.590-15F516.14
uterus, adult.CNhs10509.92-27E515.93
vagina, adult.CNhs10502.89-27D530.01
vesicular gland, adult.CNhs10491.51-27F817.05
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A137.84
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A233.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A332.66
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D752.24
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A454.12
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A556.65
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A642.53
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A747.73
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A849.39
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A937.28
whole body, embryo E11.CNhs11014.324-5I820.13
whole body, embryo E12.CNhs10587.857-27C919.55
whole body, embryo E13.CNhs10512.372-23H217.07
whole body, embryo E14.5.CNhs10578.420-27D234.76
whole body, embryo E14.CNhs10519.395-14B135.01
whole body, embryo E16.CNhs10514.453-14F250.56
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G542.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G544.92
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G535.30
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G547.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G548.41
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G538.86
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G544.67
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G541.04
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G537.51
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G547.15
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G537.55
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G535.30
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G538.74
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G548.28
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G540.12
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G534.43
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G535.53
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G546.51
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G546.87
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G539.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G539.51
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G535.51
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G535.99
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G552.19
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G539.62
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G535.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G542.15
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G541.52
whole body, embryo E17.5.CNhs10513.490-9F942.44
whole body, embryo E17.CNhs10517.475-3I526.73
whole body, embryo E18.CNhs10516.493-3B341.87
whole body, neonate N00.CNhs10525.657-19C234.81
whole body, neonate N01.CNhs10576.659-23C641.51
whole body, neonate N06.CNhs10515.692-21D131.10
whole body, neonate N10.CNhs10518.761-6B433.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:71711335..71711383,%2B&oldid=868972"