Personal tools

FFCP PHASE1:Mm9::chr3:32607890..32607932,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr3:32607890..32607932,+
|short_description=p2@Actl6a
|description=CAGE_peak_2_at_Actl6a_5end
|association_with_transcript=-153bp_to_ENSMUST00000126144_5end
|EntrezGene=56456
|EntrezGene=56456
|HGNC=
|HGNC=
|UniProt=D3YVN1
|UniProt=D3YVN1
|association_with_transcript=-153bp_to_ENSMUST00000126144_5end
|description=CAGE_peak_2_at_Actl6a_5end
|id=chr3:32607890..32607932,+
|ontology_enrichment_disease=
|phase1_expression=5.2849119544582,5.58360652222978,5.45999087267443,4.53696316960245,6.01074875935617,2.68606835059024,2.33612640595526,3.74457637980571,4.22366166455,2.80877431586392,4.45166717386313,3.58974715479014,3.42401459862411,3.05971408466491,4.33042690360362,6.07425802169478,2.79824751251259,4.88966356305268,7.12995054749842,5.51706547337439,2.38121212422995,3.27660138962921,2.87319768052829,4.15980299262857,3.21172993494038,2.8711598205751,3.01533397311352,2.80112602491656,1.71021077510736,3.52842181663903,1.55211357458713,5.71527606113668,4.30545351309199,0,3.17736781726402,3.49092755252834,4.49172583777212,3.76678467663217,1.5626706890476,2.61761871986899,1.76469446409304,4.09827290975067,1.94204141212461,3.39921408534059,3.34543873024398,2.9367480345869,1.56478268869608,2.39827672018491,2.41654801007919,1.74986909166855,1.67983705950435,2.87505128729943,3.52343472721246,0,2.35265659399725,1.54355661621568,2.0057340795713,2.57836046138721,2.63011399117477,3.70293685490423,1.90149421051854,0.677689064138264,2.66788438833342,2.2497492932035,0.988866362566974,1.4209602298922,1.19840044207362,2.68952813725088,4.25127410464758,3.51015439662396,3.36519938162211,3.42781181284564,1.10434270475807,2.20483438586917,3.92966431174769,4.5960939330501,3.30347642998166,2.17068474744819,2.15049146558741,3.16527090552465,3.38504281328916,2.08365348222704,3.62937898701795,0.56276261003168,2.75036845998258,1.76777151284201,1.85083185038834,2.05039390407831,2.65041676666144,1.13357340160178,5.50742528533188,4.30211938490693,0,0,0,1.79210754838934,1.12355536105401,1.1930122580464,0.779358013808606,0.35333957451034,3.52108549441701,3.84979432242953,2.54805239706646,0,0.649473123033642,4.05375784760158,2.02209778005913,2.62622923353838,4.14300613835475,4.15637989381509,2.25530924795977,2.13125834818499,1.15307748628029,1.80867168663147,4.35078216402108,1.75933227861546,5.6854842578906,2.89198713839823,5.30766331169925,3.558870698843,2.42925670306433,5.81850303762267,1.86391761218122,4.68449275218475,5.86450779077674,3.57639877292028,3.11519323715393,2.99951365496704,2.41433431438823,3.14560342750128,3.66000482254901,1.7591609295801,1.91206752211504,2.55715457330331,2.0778804455956,1.94689515681309,4.58277137326423,3.98102305952298,4.80173241023982,2.94618598241064,3.12289063110489,3.44853156650209,2.16074555766419,1.9591626318643,5.3748834329549,3.84341160854549,3.65436725782942,3.62184719034622,1.94011193639558,2.83659120251729,2.81521798662318,3.94552318369635,3.61461423993277,3.83077383174383,4.32142486456681,3.18454826909589,0,3.60287069960601,3.40996199274711,1.86413195281952,3.04883877975425,1.98068267607116,2.3674473558521,1.96764231747404,2.1597395804233,1.39520366850245,1.87791380979733,2.56883753207773,2.79751744852917,2.29834449710733,2.43206428637567,2.19299981137998,1.09775057645525,1.8788898626452,2.94405927989778,3.19004298375782,1.65209391491899,2.90895623329899,3.19932375802851,4.64473343720877,4.12375876230699,2.21851877085677,3.33567065767305,1.71203063501303,1.89811624617805,2.14108641141214,5.27803938480566,3.38226002469956,4.48417400373976,4.49409704327111,1.94524244887225,3.98282546508734,3.22435431620239,3.54170389090159,4.50830942692322,4.07302655690629,3.87904974335251,3.99774173374816,3.22506339333712,1.62371162777562,3.29697328466887,2.71473760627961,2.37162101669719,3.50374722003798,2.94838492669805,4.27238013531222,2.23146133527353,5.30589751455317,3.8193877767213,1.72617682470486,2.59416362840057,2.19649130550465,4.31304619582064,4.83783231969054,2.18426371180192,4.04126204715379,1.79397413521912,1.4473305640901,4.43407656399851,3.97931964718018,2.93336957595647,2.8856664581782,4.69380496577004,3.51763140627813,3.80869825417622,4.68320754858717,4.09851374676097,3.10050565508285,3.98636921643718,5.24362607090362,4.14443956478149,5.20736610893442,1.50791283939272,3.80733978673097,3.44234991113325,2.48343071674259,1.9266070798535,2.34423373184406,0.983609672260053,2.7771801992481,2.83957397474631,3.90438744296638,3.66219776145758,3.10659437338318,3.7875774594007,3.67999490025482,2.83367491172426,3.21481443702443,5.13874111330481,3.85585579706168,3.40656204499845,1.42452482933804,4.39794790254655,4.45419332025846,1.32745138339963,1.69946445308487,2.11626489875326,2.64047111658257,1.18120757152309,2.76691633149535,2.58428293168221,4.36240475373007,4.63446591900138,5.05658812697306,3.16255825724996,2.06271086496374,2.7235168460303,3.06103859853227,2.8458910432206,1.50035924522115,3.19212420556092,1.78368817602071,3.62007845324666,1.8267896946876,1.17335854031855,2.54198485036584,2.42581237860458,3.2977250588296,5.32832608096488,3.31721087104857,2.98430860007841,3.93938159388147,1.7488850197791,2.59595422814714,3.93003025835061,2.47664241555867,3.1483069652851,3.57900068308913,4.37421528707281,5.0331198105435,2.88963330989554,3.21888340344413,2.3493995546752,1.90934123603023,2.68885594543965,3.04979200690273,3.67218158794124,3.3454127362315,1.9652630737156,2.83215127408124,3.88471241909079,1.57053565190418,2.72191443912765,1.86401793926078,2.81846469342095,3.58839710505549,2.97825282822776,2.33341426012857,1.54991788173277,3.37912250981556,4.45957506853865,3.51551839078665,3.77493639932559,3.14059357073808,3.16833006883652,0.948033361884535,2.02725215290164,1.1298205288131,2.07873316764472,2.50637373934474,1.39076948346885,2.28371354087941,1.77227432609493,1.81739609906666,3.27689268616499,1.91569751759997,2.24153125701431,2.11666051608725,3.50630706544707,2.26730383615211,1.10992976687032,1.16628013592318,2.51826924546118,2.89784391048286,3.75364950902364,3.29672923681077,3.21552568618599,3.51100472824754,2.25900737046827,2.76195141904306,0.572895513439397,2.749650917499,1.37016503954128,3.0215755895588,2.02506750069542,3.15224842256954,2.26571204492102,2.07104124700728,1.45302286617847,3.59122386060928,4.43907374960749,4.61902762429759,2.30574478890781,2.02227859295016,2.889207461421,3.29656091582231,3.53011130550997,4.04315538822076,2.78827229879264,3.77252682772152,1.96647165686753,3.58540853467268,2.64203157195821,3.33405583898152,2.0859178670074,3.08654752741928,2.47251540481984,3.97437084362873,2.05721551431249,3.72699192934609,3.33810665926249,3.19762116591123,2.72917203204459,3.29996970777538,3.10977553883713,2.89376682581627,2.58027816307137,1.12228454331548,3.6776855618494,4.0386837773981,4.09231043169689,2.63392630016142,2.50778594275484,1.74867404556562,3.04111090979031,3.65280791882107,5.92993829413414,3.52946270591225,2.78241402744506
|phase1_expression=5.2849119544582,5.58360652222978,5.45999087267443,4.53696316960245,6.01074875935617,2.68606835059024,2.33612640595526,3.74457637980571,4.22366166455,2.80877431586392,4.45166717386313,3.58974715479014,3.42401459862411,3.05971408466491,4.33042690360362,6.07425802169478,2.79824751251259,4.88966356305268,7.12995054749842,5.51706547337439,2.38121212422995,3.27660138962921,2.87319768052829,4.15980299262857,3.21172993494038,2.8711598205751,3.01533397311352,2.80112602491656,1.71021077510736,3.52842181663903,1.55211357458713,5.71527606113668,4.30545351309199,0,3.17736781726402,3.49092755252834,4.49172583777212,3.76678467663217,1.5626706890476,2.61761871986899,1.76469446409304,4.09827290975067,1.94204141212461,3.39921408534059,3.34543873024398,2.9367480345869,1.56478268869608,2.39827672018491,2.41654801007919,1.74986909166855,1.67983705950435,2.87505128729943,3.52343472721246,0,2.35265659399725,1.54355661621568,2.0057340795713,2.57836046138721,2.63011399117477,3.70293685490423,1.90149421051854,0.677689064138264,2.66788438833342,2.2497492932035,0.988866362566974,1.4209602298922,1.19840044207362,2.68952813725088,4.25127410464758,3.51015439662396,3.36519938162211,3.42781181284564,1.10434270475807,2.20483438586917,3.92966431174769,4.5960939330501,3.30347642998166,2.17068474744819,2.15049146558741,3.16527090552465,3.38504281328916,2.08365348222704,3.62937898701795,0.56276261003168,2.75036845998258,1.76777151284201,1.85083185038834,2.05039390407831,2.65041676666144,1.13357340160178,5.50742528533188,4.30211938490693,0,0,0,1.79210754838934,1.12355536105401,1.1930122580464,0.779358013808606,0.35333957451034,3.52108549441701,3.84979432242953,2.54805239706646,0,0.649473123033642,4.05375784760158,2.02209778005913,2.62622923353838,4.14300613835475,4.15637989381509,2.25530924795977,2.13125834818499,1.15307748628029,1.80867168663147,4.35078216402108,1.75933227861546,5.6854842578906,2.89198713839823,5.30766331169925,3.558870698843,2.42925670306433,5.81850303762267,1.86391761218122,4.68449275218475,5.86450779077674,3.57639877292028,3.11519323715393,2.99951365496704,2.41433431438823,3.14560342750128,3.66000482254901,1.7591609295801,1.91206752211504,2.55715457330331,2.0778804455956,1.94689515681309,4.58277137326423,3.98102305952298,4.80173241023982,2.94618598241064,3.12289063110489,3.44853156650209,2.16074555766419,1.9591626318643,5.3748834329549,3.84341160854549,3.65436725782942,3.62184719034622,1.94011193639558,2.83659120251729,2.81521798662318,3.94552318369635,3.61461423993277,3.83077383174383,4.32142486456681,3.18454826909589,0,3.60287069960601,3.40996199274711,1.86413195281952,3.04883877975425,1.98068267607116,2.3674473558521,1.96764231747404,2.1597395804233,1.39520366850245,1.87791380979733,2.56883753207773,2.79751744852917,2.29834449710733,2.43206428637567,2.19299981137998,1.09775057645525,1.8788898626452,2.94405927989778,3.19004298375782,1.65209391491899,2.90895623329899,3.19932375802851,4.64473343720877,4.12375876230699,2.21851877085677,3.33567065767305,1.71203063501303,1.89811624617805,2.14108641141214,5.27803938480566,3.38226002469956,4.48417400373976,4.49409704327111,1.94524244887225,3.98282546508734,3.22435431620239,3.54170389090159,4.50830942692322,4.07302655690629,3.87904974335251,3.99774173374816,3.22506339333712,1.62371162777562,3.29697328466887,2.71473760627961,2.37162101669719,3.50374722003798,2.94838492669805,4.27238013531222,2.23146133527353,5.30589751455317,3.8193877767213,1.72617682470486,2.59416362840057,2.19649130550465,4.31304619582064,4.83783231969054,2.18426371180192,4.04126204715379,1.79397413521912,1.4473305640901,4.43407656399851,3.97931964718018,2.93336957595647,2.8856664581782,4.69380496577004,3.51763140627813,3.80869825417622,4.68320754858717,4.09851374676097,3.10050565508285,3.98636921643718,5.24362607090362,4.14443956478149,5.20736610893442,1.50791283939272,3.80733978673097,3.44234991113325,2.48343071674259,1.9266070798535,2.34423373184406,0.983609672260053,2.7771801992481,2.83957397474631,3.90438744296638,3.66219776145758,3.10659437338318,3.7875774594007,3.67999490025482,2.83367491172426,3.21481443702443,5.13874111330481,3.85585579706168,3.40656204499845,1.42452482933804,4.39794790254655,4.45419332025846,1.32745138339963,1.69946445308487,2.11626489875326,2.64047111658257,1.18120757152309,2.76691633149535,2.58428293168221,4.36240475373007,4.63446591900138,5.05658812697306,3.16255825724996,2.06271086496374,2.7235168460303,3.06103859853227,2.8458910432206,1.50035924522115,3.19212420556092,1.78368817602071,3.62007845324666,1.8267896946876,1.17335854031855,2.54198485036584,2.42581237860458,3.2977250588296,5.32832608096488,3.31721087104857,2.98430860007841,3.93938159388147,1.7488850197791,2.59595422814714,3.93003025835061,2.47664241555867,3.1483069652851,3.57900068308913,4.37421528707281,5.0331198105435,2.88963330989554,3.21888340344413,2.3493995546752,1.90934123603023,2.68885594543965,3.04979200690273,3.67218158794124,3.3454127362315,1.9652630737156,2.83215127408124,3.88471241909079,1.57053565190418,2.72191443912765,1.86401793926078,2.81846469342095,3.58839710505549,2.97825282822776,2.33341426012857,1.54991788173277,3.37912250981556,4.45957506853865,3.51551839078665,3.77493639932559,3.14059357073808,3.16833006883652,0.948033361884535,2.02725215290164,1.1298205288131,2.07873316764472,2.50637373934474,1.39076948346885,2.28371354087941,1.77227432609493,1.81739609906666,3.27689268616499,1.91569751759997,2.24153125701431,2.11666051608725,3.50630706544707,2.26730383615211,1.10992976687032,1.16628013592318,2.51826924546118,2.89784391048286,3.75364950902364,3.29672923681077,3.21552568618599,3.51100472824754,2.25900737046827,2.76195141904306,0.572895513439397,2.749650917499,1.37016503954128,3.0215755895588,2.02506750069542,3.15224842256954,2.26571204492102,2.07104124700728,1.45302286617847,3.59122386060928,4.43907374960749,4.61902762429759,2.30574478890781,2.02227859295016,2.889207461421,3.29656091582231,3.53011130550997,4.04315538822076,2.78827229879264,3.77252682772152,1.96647165686753,3.58540853467268,2.64203157195821,3.33405583898152,2.0859178670074,3.08654752741928,2.47251540481984,3.97437084362873,2.05721551431249,3.72699192934609,3.33810665926249,3.19762116591123,2.72917203204459,3.29996970777538,3.10977553883713,2.89376682581627,2.58027816307137,1.12228454331548,3.6776855618494,4.0386837773981,4.09231043169689,2.63392630016142,2.50778594275484,1.74867404556562,3.04111090979031,3.65280791882107,5.92993829413414,3.52946270591225,2.78241402744506
|short_description=p2@Actl6a
}}
}}

Revision as of 12:26, 18 April 2012

Short description:p2@Actl6a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Actl6a_5end
Coexpression cluster:NA
Association with transcript: -153bp_to_ENSMUST00000126144_5end
EntrezGene:Actl6a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Actl6a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.58
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.46
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.54
CD326+ enterocyte, pool2.CNhs13197.11849-124I46.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.74
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.22
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.81
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.45
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.59
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.42
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.06
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.07
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.89
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A47.13
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.52
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.87
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.21
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I22.80
Ileum epithelium, pool1.CNhs13199.10252-104B91.71
Ileum epithelium, pool2.CNhs13232.10253-104C13.53
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.72
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.49
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.10
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.35
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.94
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.52
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C32.63
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.25
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.51
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.37
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.20
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.93
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.17
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.39
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D92.65
Mouse Schwann, donor2.CNhs12573.11746-123F91.13
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.51
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.52
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.05
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.63
accessory axillary lymph node, adult.CNhs10475.1063-29H94.14
adrenal gland, adult.CNhs10508.49-24D74.16
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F51.81
adrenal gland, neonate N00.CNhs11191.1311-23C14.35
adrenal gland, neonate N25.CNhs11223.1377-27I31.76
amnion, adult pregnant day17.5.CNhs10488.583-22A85.69
aorta, adult.CNhs10498.46-23H12.89
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F53.56
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C35.82
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B24.68
cerebellum, neonate N30.CNhs11135.1395-42I25.86
colon, adult.CNhs10468.36-18H73.58
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.41
corpora quadrigemina, adult.CNhs10501.16-22A43.15
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.58
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.98
epididymis, adult.CNhs10490.58-23B24.80
eyeball, adult.CNhs10484.31-12G42.95
eyeball, embryo E12.CNhs11016.345-16C63.12
eyeball, embryo E14.CNhs10521.399-16E23.45
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C65.37
eyeball, neonate N01.CNhs11140.1532-43E73.84
eyeball, neonate N02.CNhs11205.1551-44G83.65
eyeball, neonate N16.CNhs11188.777-19A23.62
forelimb, embryo E11.CNhs10596.335-25E21.94
forelimb, embryo E12.CNhs10600.359-14H22.84
forelimb, embryo E13.CNhs10589.384-1E22.82
forelimb, embryo E14.CNhs10577.413-26A83.95
forelimb, embryo E15.CNhs11007.437-20E73.61
forelimb, embryo E17.CNhs10598.1517-43C43.83
forelimb, embryo E18.CNhs11008.1520-43B54.32
gonad, embryo E13.CNhs11044.1564-45I63.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.60
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.41
heart, embryo E11.CNhs10586.331-24E91.86
heart, embryo E12.CNhs11015.353-12F53.05
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C62.16
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E32.57
heart, neonate N03.CNhs11221.1349-25I22.80
heart, neonate N10.CNhs11118.749-24G12.30
heart, neonate N16.CNhs11209.782-15G12.43
heart, neonate N20.CNhs11127.821-26I62.19
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D21.88
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G13.19
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A32.91
intestine, embryo E12.CNhs11019.1251-16I53.20
intestine, embryo E13.CNhs11010.381-16D54.64
intestine, embryo E15.CNhs10602.976-16D84.12
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D33.34
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E92.14
intestine, neonate N06.CNhs11102.688-20B85.28
intestine, neonate N07.CNhs11095.720-20F23.38
intestine, neonate N10.CNhs11098.755-23A54.48
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E31.95
intestine, neonate N30.CNhs11131.1384-42G13.98
kidney, embryo E14.CNhs10606.411-4I93.22
kidney, embryo E15.CNhs10997.434-16F83.54
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I24.07
kidney, embryo E18.CNhs11001.1288-20C73.88
kidney, neonate N00.CNhs11214.646-21G74.00
kidney, neonate N10.CNhs11206.758-6D53.23
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F33.30
kidney, neonate N30.CNhs11203.1385-42H12.71
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F83.50
liver, embryo E13.CNhs10524.378-3H62.95
liver, embryo E14.CNhs10594.409-16E14.27
liver, embryo E15.CNhs10520.433-16D72.23
liver, embryo E16.CNhs10523.462-17F55.31
liver, embryo E17.CNhs10510.481-18A33.82
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F42.59
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H24.84
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A34.04
liver, neonate N25.CNhs11198.1368-26H11.79
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B14.43
lung, embryo E12.CNhs10522.354-16G23.98
lung, embryo E14.CNhs10604.404-26F82.93
lung, embryo E15.CNhs11020.432-17C52.89
lung, embryo E16.CNhs10998.458-17B64.69
lung, embryo E17.CNhs10605.480-44A63.52
lung, embryo E18.CNhs10583.1287-20I63.81
lung, neonate N00.CNhs11224.640-42C64.68
lung, neonate N06.CNhs11212.683-20E54.10
lung, neonate N07.CNhs11111.715-19A33.10
lung, neonate N10.CNhs11219.750-23E63.99
lung, neonate N20.CNhs11109.822-18A45.24
lung, neonate N25.CNhs11119.1359-25C74.14
lung, neonate N30.CNhs11133.1394-42H25.21
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.81
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H22.48
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A32.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.78
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.66
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.11
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I73.41
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I44.40
oviduct, adult pregnant day01.CNhs10500.988-6G64.45
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E52.64
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G92.58
pancreas, neonate N01.CNhs11138.1531-43D74.36
pancreas, neonate N02.CNhs11139.1539-43D84.63
pancreas, neonate N16.CNhs11136.787-43B65.06
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E63.06
pituitary gland, embryo E13.CNhs11009.370-44C72.85
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B93.19
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F53.62
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G32.54
prostate, adult.CNhs10470.859-1F82.43
skin, adult.CNhs10492.30-1C33.30
skin, neonate N00.CNhs11124.650-25G45.33
skin, neonate N03.CNhs11215.662-22H33.32
skin, neonate N06.CNhs11097.693-20I52.98
skin, neonate N10.CNhs11108.762-6C43.94
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G23.93
spleen, embryo E16.CNhs11035.461-43C12.48
spleen, embryo E18.CNhs11011.1271-21F23.15
spleen, neonate N10.CNhs11116.752-24D13.58
spleen, neonate N20.CNhs11112.824-19H14.37
spleen, neonate N25.CNhs11099.1354-25G35.03
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.22
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.35
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E32.69
stomach, embryo E15.CNhs10603.1252-16G83.05
stomach, embryo E16.CNhs11022.459-17D43.67
stomach, embryo E17.CNhs11006.1035-18D53.35
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B82.83
stomach, neonate N07.CNhs11210.718-18A93.88
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I12.72
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F53.59
testis, embryo E15.CNhs11034.443-27C52.98
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I51.55
testis, embryo E18.CNhs11027.503-18G53.38
testis, neonate N00.CNhs11189.1300-22B74.46
testis, neonate N07.CNhs11222.726-26I43.52
testis, neonate N10.CNhs11204.763-44D93.77
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E23.17
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I21.13
thymus, embryo E16.CNhs11002.456-26C52.08
thymus, embryo E17.CNhs10581.478-18C12.51
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F82.28
thymus, neonate N03.CNhs11137.2104-43C71.77
thymus, neonate N06.CNhs11197.681-26C41.82
thymus, neonate N07.CNhs11211.713-19D33.28
thymus, neonate N10.CNhs11194.748-24E41.92
thymus, neonate N20.CNhs11186.820-7A22.24
thymus, neonate N25.CNhs11125.1362-25G72.12
thymus, neonate N30.CNhs11132.1393-42G23.51
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.17
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.52
urinary bladder, adult.CNhs10481.879-12E42.90
uterus, adult pregnant day19.CNhs10497.590-15F53.75
uterus, adult.CNhs10509.92-27E53.30
vagina, adult.CNhs10502.89-27D53.22
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.75
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I81.45
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H24.44
whole body, embryo E14.5.CNhs10578.420-27D24.62
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.59
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.97
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.73
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F92.51
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C65.93
whole body, neonate N06.CNhs10515.692-21D13.53
whole body, neonate N10.CNhs10518.761-6B42.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:32607890..32607932,%2B&oldid=884508"