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FFCP PHASE1:Mm9::chr4:115457404..115457442,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr4:115457404..115457442,+
|short_description=p2@Atpaf1
|description=CAGE_peak_2_at_Atpaf1_5end
|association_with_transcript=0bp_to_NM_181040_5end
|EntrezGene=230649
|EntrezGene=230649
|HGNC=
|HGNC=
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_NM_181040_5end
|description=CAGE_peak_2_at_Atpaf1_5end
|id=chr4:115457404..115457442,+
|ontology_enrichment_disease=
|phase1_expression=2.40223270657191,1.39590163055744,0.909998478779072,2.11724947914781,2.00358291978539,1.00727563147134,1.86890112476421,0.516493293766305,0,0.468129052643987,0,0.239316476986009,0.342401459862411,0.437102012094987,0.999329285446988,1.01237633694913,0.699561878128147,0.630924330716475,0.959801035240171,0,1.9559956734746,0.595745707205312,1.82839852397255,1.11994695955385,0.91763712426868,1.14846392823004,0.86152399231815,1.72376986148711,1.33016393619462,1.00812051903972,0.886922042621219,1.90509202037889,7.38077745101484,0,1.44425809875637,2.65975432573588,3.26670970019791,0,0,0,0.588231488031014,0,0.485510353031154,1.25896817975577,1.21652317463417,2.0190142737785,0,1.30815093828268,1.09843091367236,1.1665793944457,2.09979632438044,1.43752564364972,0.503347818173209,0,0,1.80081605225163,1.71920063963254,1.03134418455488,0.809265843438391,0.528990979272033,0.633831403506179,0.677689064138264,1.77858959222228,1.3498495759221,0,0,0.599200221036809,1.53687322128622,1.76272340924412,2.02508907497536,1.26194976810829,1.71390590642282,0.441737081903227,0.489963196859816,1.43768206527355,0,8.8092704799511,10.9811110753261,11.2132769277058,0.527545150920775,1.09785172322892,1.56274011167028,4.74611098302348,1.68828783009504,3.20876320331301,0.883885756421003,1.70846016958924,1.1183966749518,0.832988126665025,1.96486056277642,0.579728977403356,2.58127163094416,1.3599426674155,0.539703191637817,1.94932925234301,0,1.54488862144927,1.36344258062446,1.03914401841148,0.35333957451034,2.25349471642689,1.28326477414318,0,0,1.5154372870785,2.02687892380079,2.52762222507392,1.02765491747154,0,8.90652834388949,2.60227990149204,5.48037860961854,4.61230994512117,6.0289056221049,4.11560474974967,5.78066320116507,1.48316980640624,2.16899035379867,0.884610551949874,0.970601099684455,1.10420759230197,0.969750506270444,0,3.80615036115011,3.56059401582874,4.34276993854605,0.11981512450592,0,0.254140454146129,10.9347166765521,15.0975198930147,1.63350657746724,4.86708096538374,4.34716277461562,13.0906468072523,12.4925772562173,1.52759045775474,0.746441823660558,1.0108910337347,2.31486041475121,2.21204753036596,3.44853156650209,2.52086981727489,2.26057226753573,1.76894897793452,1.5373646434182,1.49922759295566,2.58703370739016,2.37124792226126,2.64748512234947,1.23165786914764,1.7535658594206,1.94633074457919,1.74126083261083,1.4404749548556,2.18937693500343,0.702213187313235,0.257347907114715,0.284163499395593,4.97101854085205,4.45599513964083,3.06105504483725,1.89395788468168,3.14822770795846,2.77680803197281,3.48800917125612,4.02410102099429,2.10177616260905,3.12663714835613,4.10418660197738,3.40489000092594,5.4093995347373,5.26920276698522,5.90508242545636,2.52347938276953,1.85228302282712,2.31293148088659,2.11560453330835,2.77274725695804,2.32236671860439,1.41754207454303,3.02525286935014,2.89091456998331,2.09248188723815,2.37264530772256,3.45867804920423,2.26201687920243,3.18330355265841,2.33956904542944,2.69645822596266,2.59365659849633,1.59313018603494,0.948339504765408,1.82797620175566,2.25415471346161,2.44381593414377,1.35766741017338,2.59502533594179,2.46622494784603,3.24742325555125,4.86696056308262,4.31890073726302,2.37162101669719,2.66952169145751,1.37591296579242,1.79889689907883,1.62288097110802,2.41177159752417,2.5462585178142,3.45235364940973,1.13494658742525,3.56929837144506,4.31304619582064,1.86070473834252,4.68056509671841,3.03094653536534,3.58794827043824,1.4473305640901,1.29327233116623,2.08440552947533,0.977789858652155,1.18821560042632,0,2.01007508930179,1.90434912708811,0.195133647857799,0.945810864637146,1.10732344824387,1.2756381492599,0.81931657357869,1.03610989119537,1.44649058581512,0,0,0.491764273019036,0.827810238914197,15.2523060488402,9.96299336033727,2.29508923527346,5.30188947129183,0.94652465824877,1.56175497718655,0.646270193198397,2.15071918157297,2.00518806674155,1.98153571552183,1.61924280669958,1.16902343164525,1.18586333383957,6.42642632843614,2.55492153374884,0.712262414669021,1.62886959353576,1.31976098378028,0,1.94224508923985,0.906970670894253,2.45186603682668,1.77181135728464,2.45948118355142,2.06742634534577,1.81766864738753,1.42598951353889,1.8962205476149,2.10837217149998,2.06271086496374,2.04263763452273,2.52085531643834,2.32845630808958,1.50035924522115,1.24138163549592,1.07021290561242,1.81003922662333,0.913394847343798,0.469343416127421,1.69465656691056,1.32317038832977,1.6488625294148,1.45317984026315,1.56813604813205,2.26807453605959,3.93938159388147,3.20628920292836,19.655082013114,0.683483523191411,1.23832120777933,1.11116716421827,0.941842285023455,0.956859594047176,0.228778173206523,0.509935289981566,0.139951452323658,0.414599921413271,1.90934123603023,2.05618395827738,1.21991680276109,1.83609079397062,1.04544148007234,0.87345025498471,1.48350781023303,0.743881101528023,1.83229159388821,1.94422459937689,1.86401793926078,0,1.04661582230785,1.65458490457098,2.72231663681667,2.32487682259916,3.04121025883401,2.11243029562357,2.0832701575032,1.8874681996628,0.483168241652012,1.15212002503146,0.948033361884535,3.44632865993279,2.36235201479103,1.81889152168913,1.07416017400489,1.39076948346885,1.44234539423963,0.886137163047463,1.21159739937777,1.06689529317,1.00826185136841,0.877120926657772,1.05833025804362,0.350630706544707,1.81384306892169,2.66383144048878,2.9605572681127,0.839423081820392,0.965947970160952,1.12609485270709,1.83151624267265,1.07184189539533,2.00628841614145,2.82375921308533,1.38097570952153,2.86447756719698,1.54667864109319,6.85082519770642,4.5323633843382,2.02506750069542,4.95353323546643,0.906284817968409,2.07104124700728,4.25528125095124,3.59122386060928,2.04880326904961,1.21553358534147,1.46729213839588,1.47074806760011,1.55572709461131,1.64828045791115,3.20919209591815,2.02157769411038,1.52087579934144,2.26351609663291,1.40462261204824,1.6646539625266,1.89537047553524,1.90517476513229,1.62238056322798,2.70072908649187,2.06042950401653,2.50238164228475,2.05721551431249,1.95223386775271,1.66905332963125,3.34296758254356,1.12931256498397,2.45382362885862,2.56099162021882,2.10455769150274,1.7654534799962,2.24456908663095,2.01679530811096,1.0835493061312,2.45538625901814,2.32405261778949,1.92906610981141,0.749431733813838,1.87145286756327,0.644613162144895,1.53030665655075,1.10295709559758,1.85494268496337
|phase1_expression=2.40223270657191,1.39590163055744,0.909998478779072,2.11724947914781,2.00358291978539,1.00727563147134,1.86890112476421,0.516493293766305,0,0.468129052643987,0,0.239316476986009,0.342401459862411,0.437102012094987,0.999329285446988,1.01237633694913,0.699561878128147,0.630924330716475,0.959801035240171,0,1.9559956734746,0.595745707205312,1.82839852397255,1.11994695955385,0.91763712426868,1.14846392823004,0.86152399231815,1.72376986148711,1.33016393619462,1.00812051903972,0.886922042621219,1.90509202037889,7.38077745101484,0,1.44425809875637,2.65975432573588,3.26670970019791,0,0,0,0.588231488031014,0,0.485510353031154,1.25896817975577,1.21652317463417,2.0190142737785,0,1.30815093828268,1.09843091367236,1.1665793944457,2.09979632438044,1.43752564364972,0.503347818173209,0,0,1.80081605225163,1.71920063963254,1.03134418455488,0.809265843438391,0.528990979272033,0.633831403506179,0.677689064138264,1.77858959222228,1.3498495759221,0,0,0.599200221036809,1.53687322128622,1.76272340924412,2.02508907497536,1.26194976810829,1.71390590642282,0.441737081903227,0.489963196859816,1.43768206527355,0,8.8092704799511,10.9811110753261,11.2132769277058,0.527545150920775,1.09785172322892,1.56274011167028,4.74611098302348,1.68828783009504,3.20876320331301,0.883885756421003,1.70846016958924,1.1183966749518,0.832988126665025,1.96486056277642,0.579728977403356,2.58127163094416,1.3599426674155,0.539703191637817,1.94932925234301,0,1.54488862144927,1.36344258062446,1.03914401841148,0.35333957451034,2.25349471642689,1.28326477414318,0,0,1.5154372870785,2.02687892380079,2.52762222507392,1.02765491747154,0,8.90652834388949,2.60227990149204,5.48037860961854,4.61230994512117,6.0289056221049,4.11560474974967,5.78066320116507,1.48316980640624,2.16899035379867,0.884610551949874,0.970601099684455,1.10420759230197,0.969750506270444,0,3.80615036115011,3.56059401582874,4.34276993854605,0.11981512450592,0,0.254140454146129,10.9347166765521,15.0975198930147,1.63350657746724,4.86708096538374,4.34716277461562,13.0906468072523,12.4925772562173,1.52759045775474,0.746441823660558,1.0108910337347,2.31486041475121,2.21204753036596,3.44853156650209,2.52086981727489,2.26057226753573,1.76894897793452,1.5373646434182,1.49922759295566,2.58703370739016,2.37124792226126,2.64748512234947,1.23165786914764,1.7535658594206,1.94633074457919,1.74126083261083,1.4404749548556,2.18937693500343,0.702213187313235,0.257347907114715,0.284163499395593,4.97101854085205,4.45599513964083,3.06105504483725,1.89395788468168,3.14822770795846,2.77680803197281,3.48800917125612,4.02410102099429,2.10177616260905,3.12663714835613,4.10418660197738,3.40489000092594,5.4093995347373,5.26920276698522,5.90508242545636,2.52347938276953,1.85228302282712,2.31293148088659,2.11560453330835,2.77274725695804,2.32236671860439,1.41754207454303,3.02525286935014,2.89091456998331,2.09248188723815,2.37264530772256,3.45867804920423,2.26201687920243,3.18330355265841,2.33956904542944,2.69645822596266,2.59365659849633,1.59313018603494,0.948339504765408,1.82797620175566,2.25415471346161,2.44381593414377,1.35766741017338,2.59502533594179,2.46622494784603,3.24742325555125,4.86696056308262,4.31890073726302,2.37162101669719,2.66952169145751,1.37591296579242,1.79889689907883,1.62288097110802,2.41177159752417,2.5462585178142,3.45235364940973,1.13494658742525,3.56929837144506,4.31304619582064,1.86070473834252,4.68056509671841,3.03094653536534,3.58794827043824,1.4473305640901,1.29327233116623,2.08440552947533,0.977789858652155,1.18821560042632,0,2.01007508930179,1.90434912708811,0.195133647857799,0.945810864637146,1.10732344824387,1.2756381492599,0.81931657357869,1.03610989119537,1.44649058581512,0,0,0.491764273019036,0.827810238914197,15.2523060488402,9.96299336033727,2.29508923527346,5.30188947129183,0.94652465824877,1.56175497718655,0.646270193198397,2.15071918157297,2.00518806674155,1.98153571552183,1.61924280669958,1.16902343164525,1.18586333383957,6.42642632843614,2.55492153374884,0.712262414669021,1.62886959353576,1.31976098378028,0,1.94224508923985,0.906970670894253,2.45186603682668,1.77181135728464,2.45948118355142,2.06742634534577,1.81766864738753,1.42598951353889,1.8962205476149,2.10837217149998,2.06271086496374,2.04263763452273,2.52085531643834,2.32845630808958,1.50035924522115,1.24138163549592,1.07021290561242,1.81003922662333,0.913394847343798,0.469343416127421,1.69465656691056,1.32317038832977,1.6488625294148,1.45317984026315,1.56813604813205,2.26807453605959,3.93938159388147,3.20628920292836,19.655082013114,0.683483523191411,1.23832120777933,1.11116716421827,0.941842285023455,0.956859594047176,0.228778173206523,0.509935289981566,0.139951452323658,0.414599921413271,1.90934123603023,2.05618395827738,1.21991680276109,1.83609079397062,1.04544148007234,0.87345025498471,1.48350781023303,0.743881101528023,1.83229159388821,1.94422459937689,1.86401793926078,0,1.04661582230785,1.65458490457098,2.72231663681667,2.32487682259916,3.04121025883401,2.11243029562357,2.0832701575032,1.8874681996628,0.483168241652012,1.15212002503146,0.948033361884535,3.44632865993279,2.36235201479103,1.81889152168913,1.07416017400489,1.39076948346885,1.44234539423963,0.886137163047463,1.21159739937777,1.06689529317,1.00826185136841,0.877120926657772,1.05833025804362,0.350630706544707,1.81384306892169,2.66383144048878,2.9605572681127,0.839423081820392,0.965947970160952,1.12609485270709,1.83151624267265,1.07184189539533,2.00628841614145,2.82375921308533,1.38097570952153,2.86447756719698,1.54667864109319,6.85082519770642,4.5323633843382,2.02506750069542,4.95353323546643,0.906284817968409,2.07104124700728,4.25528125095124,3.59122386060928,2.04880326904961,1.21553358534147,1.46729213839588,1.47074806760011,1.55572709461131,1.64828045791115,3.20919209591815,2.02157769411038,1.52087579934144,2.26351609663291,1.40462261204824,1.6646539625266,1.89537047553524,1.90517476513229,1.62238056322798,2.70072908649187,2.06042950401653,2.50238164228475,2.05721551431249,1.95223386775271,1.66905332963125,3.34296758254356,1.12931256498397,2.45382362885862,2.56099162021882,2.10455769150274,1.7654534799962,2.24456908663095,2.01679530811096,1.0835493061312,2.45538625901814,2.32405261778949,1.92906610981141,0.749431733813838,1.87145286756327,0.644613162144895,1.53030665655075,1.10295709559758,1.85494268496337
|short_description=p2@Atpaf1
}}
}}

Revision as of 14:43, 18 April 2012

Short description:p2@Atpaf1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Atpaf1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_NM_181040_5end
EntrezGene:Atpaf1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Atpaf1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.12
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.96
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.83
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G67.38
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.27
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.22
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.76
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.44
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.98
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.21
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.83
Mouse Schwann, donor2.CNhs12573.11746-123F91.96
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D78.91
adrenal gland, embryo E14.CNhs11038.406-44C52.60
adrenal gland, embryo E16.CNhs11004.1254-43D65.48
adrenal gland, embryo E17.CNhs11043.1263-45I14.61
adrenal gland, embryo E18.CNhs11026.1262-18F56.03
adrenal gland, neonate N00.CNhs11191.1311-23C14.12
adrenal gland, neonate N25.CNhs11223.1377-27I35.78
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H12.17
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.81
cerebellum, neonate N30.CNhs11135.1395-42I23.56
colon, adult.CNhs10468.36-18H74.34
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A410.93
corpus striatum, adult.CNhs10487.19-21D815.10
corpus striatum, neonate N00.CNhs11226.630-43F11.63
cortex, adult.CNhs10473.12-14D54.87
cortex, neonate N30.CNhs11107.1392-42F24.35
diencephalon, adult.CNhs10482.20-12F213.09
diencephalon, neonate N30.CNhs11201.1388-42B212.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.53
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C62.21
eyeball, embryo E14.CNhs10521.399-16E23.45
eyeball, embryo E15.CNhs10593.426-16C92.52
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C61.77
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G81.50
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H22.65
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I62.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E94.97
heart, embryo E12.CNhs11015.353-12F54.46
heart, embryo E13.CNhs11013.376-3I93.06
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C83.15
heart, embryo E16.CNhs11021.457-17C62.78
heart, embryo E17.CNhs11025.479-18E53.49
heart, embryo E18.CNhs11030.1283-20G34.02
heart, neonate N00.CNhs11213.639-21E32.10
heart, neonate N03.CNhs11221.1349-25I23.13
heart, neonate N10.CNhs11118.749-24G14.10
heart, neonate N16.CNhs11209.782-15G13.40
heart, neonate N20.CNhs11127.821-26I65.41
heart, neonate N25.CNhs11196.1351-25D35.27
heart, neonate N30.CNhs11202.1390-42D25.91
hippocampus, adult.CNhs10478.13-16E82.52
hippocampus, neonate N00.CNhs11228.627-43G11.85
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A32.12
intestine, embryo E12.CNhs11019.1251-16I52.77
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H43.03
intestine, embryo E17.CNhs10582.482-18D32.89
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E93.46
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F23.18
intestine, neonate N10.CNhs11098.755-23A52.34
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E32.59
intestine, neonate N30.CNhs11131.1384-42G11.59
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F81.83
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G72.60
kidney, neonate N10.CNhs11206.758-6D52.47
kidney, neonate N20.CNhs11113.832-19I13.25
kidney, neonate N25.CNhs11122.1353-25F34.87
kidney, neonate N30.CNhs11203.1385-42H14.32
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F82.67
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E11.80
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F52.41
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F41.13
liver, neonate N03.CNhs11123.1345-25G23.57
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B94.68
liver, neonate N20.CNhs11220.823-25A33.03
liver, neonate N25.CNhs11198.1368-26H13.59
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C215.25
medulla oblongata, neonate N30.CNhs11200.1396-42A39.96
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.30
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.30
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I96.43
ovary, adult.CNhs10507.91-2I72.55
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E52.45
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E62.52
pituitary gland, embryo E13.CNhs11009.370-44C72.33
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C31.65
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H31.57
skin, neonate N06.CNhs11097.693-20I52.27
skin, neonate N10.CNhs11108.762-6C43.94
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C919.66
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D41.84
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B81.48
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I11.94
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C51.65
testis, embryo E16.CNhs11033.470-26G52.72
testis, embryo E17.CNhs11029.486-18I52.32
testis, embryo E18.CNhs11027.503-18G53.04
testis, neonate N00.CNhs11189.1300-22B72.11
testis, neonate N07.CNhs11222.726-26I42.08
testis, neonate N10.CNhs11204.763-44D91.89
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I43.45
thymus, embryo E15.CNhs11005.430-45I22.36
thymus, embryo E16.CNhs11002.456-26C51.82
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F81.44
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C41.21
thymus, neonate N07.CNhs11211.713-19D31.07
thymus, neonate N10.CNhs11194.748-24E41.01
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G71.06
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.96
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E51.83
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I84.26
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.32
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.85





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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