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FFCP PHASE1:Mm9::chr5:88994034..88994083,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr5:88994034..88994083,+
|short_description=p2@Rufy3
|description=CAGE_peak_2_at_Rufy3_5end
|association_with_transcript=0bp_to_ENSMUST00000101048,uc008xzw.1,uc008xzx.1_5end
|EntrezGene=52822
|EntrezGene=52822
|HGNC=
|HGNC=
|UniProt=E9QL96,Q9D394
|UniProt=E9QL96,Q9D394
|association_with_transcript=0bp_to_ENSMUST00000101048,uc008xzw.1,uc008xzx.1_5end
|description=CAGE_peak_2_at_Rufy3_5end
|id=chr5:88994034..88994083,+
|ontology_enrichment_disease=
|phase1_expression=8.80818659076367,11.8651638597383,16.3799726180233,20.5675663688644,24.0429950374247,15.277013743982,10.9797941079897,3.74457637980571,8.72890077340334,6.55380673701582,3.08192342805909,4.3874687447435,1.19840510951844,0.874204024189974,0.666219523631325,3.44207954562704,4.19737126876888,6.94016763788123,7.81552271552711,10.6097412949508,8.07911256435163,8.14185799847259,8.35839325244593,4.15980299262857,6.8822784320151,13.2073351746455,9.04600191934057,10.9890328669803,6.27077284206034,9.8291750606373,6.43018480900384,0.635030673459631,1.23012957516914,0,7.51014211353314,8.97667084935859,9.18762103180661,5.02237956884289,2.3440060335714,5.75876118371178,4.1176204162171,4.09827290975067,3.88408282424923,3.9028013572429,5.17022349219524,4.22157529971868,4.69434806608824,3.48840250208714,2.19686182734472,4.08302788055995,3.63964696225943,1.43752564364972,7.88578248471361,3.62681071005672,3.02484419228218,2.05807548828758,4.01146815914259,3.6097046459421,30.9544185115185,34.9134046319542,25.9870875437533,0,1.77858959222228,8.99899717281399,3.9554654502679,7.104801149461,6.5912024314049,2.30530983192933,13.9980976616445,16.0657066614712,14.7227472945967,13.139945282575,11.4851641294839,20.3334726696824,17.7314121383737,17.4651569455904,6.60695285996332,8.42736431362239,11.981309593987,35.2136388239618,36.5035697973615,33.8593690861894,11.4465029590566,6.75315132038016,9.93188610549266,18.5616008848411,19.0778052270798,28.519115211271,11.510381386644,9.8998743739889,13.3337664802772,17.2084775396277,5.439770669662,14.0322829825832,18.1937396885347,12.9927797258227,9.83110940922263,5.11290967734173,4.67614808285164,5.3000936176551,7.18301440861071,10.2661181931454,17.8363667794652,14.2213340630666,3.24736561516821,3.04031838570118,4.54972000513305,12.1034912502204,5.69663344023778,7.27366481417641,6.59244241711316,7.30717147949139,8.07154240396205,7.988299949289,9.8774513993992,7.91699525376955,18.2924276123437,7.22996784599558,8.84610551949874,6.47067399789637,6.8460870722722,4.363877278217,5.59175283654366,4.39171195517321,2.93225389538837,7.40825460104915,3.35482348616577,4.79922184794726,3.04968544975355,9.13722900369418,5.49000723382352,13.9476330845279,6.08385120672968,5.62574006126727,5.81806524766768,5.67844420737152,6.31404055871961,6.46916247172484,5.81262344397452,16.414464759145,7.41686524887411,13.3343220571414,12.7844112161798,16.2761203262572,12.5187158438443,13.1957131893395,14.2426621330788,14.2286853906459,4.74249584452253,5.67318240503458,5.98233822157426,5.91828477554452,6.39508673218875,11.4923214952315,10.906453229621,6.17006227137329,2.80885274925294,1.80143534980301,1.98914449576915,6.83515049367156,6.80125573945179,7.20248245844059,7.33908680314152,9.83821158737019,6.32495162838251,7.44108623201305,8.85302224618743,10.9759421825139,8.3925523455875,6.40253109908471,9.07970666913584,8.47959927066927,6.80605357402257,7.64976586934119,5.67782861123144,23.7709654596147,8.92130714056255,8.72686869989696,3.62590025909898,5.80591679651096,7.98978260196979,8.0673409849337,9.33987784148455,7.22857379227725,6.16887780007865,6.25856027951241,7.54005626400809,6.96347652144028,6.23885078781184,7.19055526923377,4.32276099749388,9.75792238946399,4.1726938209678,7.76889885746156,9.01661885384643,12.6263823264095,13.7706265889014,15.5701520156507,18.7812515259044,23.1747932327975,24.6488002710958,26.0368015874999,21.937494404449,3.83743743147016,4.32429789249047,5.39669069723649,6.08580364165509,4.3411888755435,4.83789118384698,5.75392274901621,9.24170792617702,8.78596522201861,14.3768206527355,10.7920874823866,9.98520553966594,11.8712072635143,10.0462551572271,14.473305640901,4.43407656399851,5.87423376488503,5.54080919902888,6.11082308790677,6.10194645550105,8.5428191295326,7.61739650835244,14.2447562936193,8.51229778173431,5.3151525515706,9.24837658213425,6.22680595919804,7.9435091658312,6.219909519005,46.7452980211744,25.0196614556606,3.93411418415229,5.51873492609465,10.9174401191699,12.4244387787735,3.93443868904021,6.05930225290495,3.78609863299508,4.29482618726302,5.38558494331997,5.4962823529087,8.91194696329577,7.35998980050964,2.02405350837447,7.3063964477828,7.90575555893047,6.42642632843614,7.94864477166304,4.62970569534864,6.67836533349662,8.24850614862677,9.2921596837974,3.39892890616974,8.16273603804828,6.41257271170054,5.31543407185391,11.3751004739253,8.78656196771952,6.18007340111759,9.26893183800275,9.16506598013866,5.27093042874994,14.4389760547462,3.40439605753788,4.32146625675145,2.71653235943784,5.78709994585299,4.43350584105684,4.63758925765383,6.91105886528908,3.65357938937519,3.75474732901937,18.6412222360162,26.9044645627054,16.6535115470895,12.1098320021929,11.7007074360622,10.8628833042854,11.4898629821543,6.99554007911642,17.2445530869774,5.63873906632914,7.22354037871279,5.18544676635193,2.63715839806567,2.1871076435364,2.28778173206523,4.24946074984638,2.79902904647316,3.86959926652387,11.4560474161814,5.3777118908793,7.5228202836934,6.80433647177348,10.8725913927524,7.42432716737004,7.95699643670442,10.4143354213923,13.3495530411855,12.0541925161367,6.21339313086926,3.94585057078933,7.92437694033088,5.12921320417003,6.80579159204167,6.32883135040882,6.42033276864957,6.68936260280798,7.81226309063701,11.5345278868282,11.5960377996483,8.06484017522023,4.74016680942267,7.29810775044591,6.47079030138412,7.66532855568991,8.05620130503666,7.3512101269068,4.80781798079875,4.87375439676105,4.34155734777035,4.95344243257499,4.43635214602098,5.26272555994663,6.06134602334076,5.37633750035217,9.52267611183888,2.44184548711471,2.87084341150322,3.69346156000973,13.1368923941889,9.19644129710792,9.89018771043231,9.86094543763703,15.5487352250963,5.64751842617067,3.68260189205742,5.72895513439397,5.499301834998,6.16574267793578,5.2877572817279,4.72515750162264,5.85417564191487,4.53142408984205,2.5888015587591,6.53860289780313,8.37952234142165,7.34154504742777,13.6139761558245,7.75568701723535,12.685202083051,6.00066165064361,11.743998262617,13.1576875932644,10.3605856823157,10.8996098952803,13.5810965797975,10.6751318515666,10.756225604018,13.1527223908354,12.3836359733599,14.2537720912172,15.2398284166327,13.5988347265091,9.86232764900462,8.22886205724997,9.58369353260422,10.4911923576821,10.61028841416,11.0107975085937,11.0845136338096,10.2439664808753,7.89209134313529,9.77789619690205,9.53941861818155,12.5753119211625,15.0711858034612,11.4584692087513,11.7751999301334,8.29498427218908,11.7410971630835,8.18760629558929,13.1071342969462,6.31251495827183,7.27951683094401,6.26043156175138
|phase1_expression=8.80818659076367,11.8651638597383,16.3799726180233,20.5675663688644,24.0429950374247,15.277013743982,10.9797941079897,3.74457637980571,8.72890077340334,6.55380673701582,3.08192342805909,4.3874687447435,1.19840510951844,0.874204024189974,0.666219523631325,3.44207954562704,4.19737126876888,6.94016763788123,7.81552271552711,10.6097412949508,8.07911256435163,8.14185799847259,8.35839325244593,4.15980299262857,6.8822784320151,13.2073351746455,9.04600191934057,10.9890328669803,6.27077284206034,9.8291750606373,6.43018480900384,0.635030673459631,1.23012957516914,0,7.51014211353314,8.97667084935859,9.18762103180661,5.02237956884289,2.3440060335714,5.75876118371178,4.1176204162171,4.09827290975067,3.88408282424923,3.9028013572429,5.17022349219524,4.22157529971868,4.69434806608824,3.48840250208714,2.19686182734472,4.08302788055995,3.63964696225943,1.43752564364972,7.88578248471361,3.62681071005672,3.02484419228218,2.05807548828758,4.01146815914259,3.6097046459421,30.9544185115185,34.9134046319542,25.9870875437533,0,1.77858959222228,8.99899717281399,3.9554654502679,7.104801149461,6.5912024314049,2.30530983192933,13.9980976616445,16.0657066614712,14.7227472945967,13.139945282575,11.4851641294839,20.3334726696824,17.7314121383737,17.4651569455904,6.60695285996332,8.42736431362239,11.981309593987,35.2136388239618,36.5035697973615,33.8593690861894,11.4465029590566,6.75315132038016,9.93188610549266,18.5616008848411,19.0778052270798,28.519115211271,11.510381386644,9.8998743739889,13.3337664802772,17.2084775396277,5.439770669662,14.0322829825832,18.1937396885347,12.9927797258227,9.83110940922263,5.11290967734173,4.67614808285164,5.3000936176551,7.18301440861071,10.2661181931454,17.8363667794652,14.2213340630666,3.24736561516821,3.04031838570118,4.54972000513305,12.1034912502204,5.69663344023778,7.27366481417641,6.59244241711316,7.30717147949139,8.07154240396205,7.988299949289,9.8774513993992,7.91699525376955,18.2924276123437,7.22996784599558,8.84610551949874,6.47067399789637,6.8460870722722,4.363877278217,5.59175283654366,4.39171195517321,2.93225389538837,7.40825460104915,3.35482348616577,4.79922184794726,3.04968544975355,9.13722900369418,5.49000723382352,13.9476330845279,6.08385120672968,5.62574006126727,5.81806524766768,5.67844420737152,6.31404055871961,6.46916247172484,5.81262344397452,16.414464759145,7.41686524887411,13.3343220571414,12.7844112161798,16.2761203262572,12.5187158438443,13.1957131893395,14.2426621330788,14.2286853906459,4.74249584452253,5.67318240503458,5.98233822157426,5.91828477554452,6.39508673218875,11.4923214952315,10.906453229621,6.17006227137329,2.80885274925294,1.80143534980301,1.98914449576915,6.83515049367156,6.80125573945179,7.20248245844059,7.33908680314152,9.83821158737019,6.32495162838251,7.44108623201305,8.85302224618743,10.9759421825139,8.3925523455875,6.40253109908471,9.07970666913584,8.47959927066927,6.80605357402257,7.64976586934119,5.67782861123144,23.7709654596147,8.92130714056255,8.72686869989696,3.62590025909898,5.80591679651096,7.98978260196979,8.0673409849337,9.33987784148455,7.22857379227725,6.16887780007865,6.25856027951241,7.54005626400809,6.96347652144028,6.23885078781184,7.19055526923377,4.32276099749388,9.75792238946399,4.1726938209678,7.76889885746156,9.01661885384643,12.6263823264095,13.7706265889014,15.5701520156507,18.7812515259044,23.1747932327975,24.6488002710958,26.0368015874999,21.937494404449,3.83743743147016,4.32429789249047,5.39669069723649,6.08580364165509,4.3411888755435,4.83789118384698,5.75392274901621,9.24170792617702,8.78596522201861,14.3768206527355,10.7920874823866,9.98520553966594,11.8712072635143,10.0462551572271,14.473305640901,4.43407656399851,5.87423376488503,5.54080919902888,6.11082308790677,6.10194645550105,8.5428191295326,7.61739650835244,14.2447562936193,8.51229778173431,5.3151525515706,9.24837658213425,6.22680595919804,7.9435091658312,6.219909519005,46.7452980211744,25.0196614556606,3.93411418415229,5.51873492609465,10.9174401191699,12.4244387787735,3.93443868904021,6.05930225290495,3.78609863299508,4.29482618726302,5.38558494331997,5.4962823529087,8.91194696329577,7.35998980050964,2.02405350837447,7.3063964477828,7.90575555893047,6.42642632843614,7.94864477166304,4.62970569534864,6.67836533349662,8.24850614862677,9.2921596837974,3.39892890616974,8.16273603804828,6.41257271170054,5.31543407185391,11.3751004739253,8.78656196771952,6.18007340111759,9.26893183800275,9.16506598013866,5.27093042874994,14.4389760547462,3.40439605753788,4.32146625675145,2.71653235943784,5.78709994585299,4.43350584105684,4.63758925765383,6.91105886528908,3.65357938937519,3.75474732901937,18.6412222360162,26.9044645627054,16.6535115470895,12.1098320021929,11.7007074360622,10.8628833042854,11.4898629821543,6.99554007911642,17.2445530869774,5.63873906632914,7.22354037871279,5.18544676635193,2.63715839806567,2.1871076435364,2.28778173206523,4.24946074984638,2.79902904647316,3.86959926652387,11.4560474161814,5.3777118908793,7.5228202836934,6.80433647177348,10.8725913927524,7.42432716737004,7.95699643670442,10.4143354213923,13.3495530411855,12.0541925161367,6.21339313086926,3.94585057078933,7.92437694033088,5.12921320417003,6.80579159204167,6.32883135040882,6.42033276864957,6.68936260280798,7.81226309063701,11.5345278868282,11.5960377996483,8.06484017522023,4.74016680942267,7.29810775044591,6.47079030138412,7.66532855568991,8.05620130503666,7.3512101269068,4.80781798079875,4.87375439676105,4.34155734777035,4.95344243257499,4.43635214602098,5.26272555994663,6.06134602334076,5.37633750035217,9.52267611183888,2.44184548711471,2.87084341150322,3.69346156000973,13.1368923941889,9.19644129710792,9.89018771043231,9.86094543763703,15.5487352250963,5.64751842617067,3.68260189205742,5.72895513439397,5.499301834998,6.16574267793578,5.2877572817279,4.72515750162264,5.85417564191487,4.53142408984205,2.5888015587591,6.53860289780313,8.37952234142165,7.34154504742777,13.6139761558245,7.75568701723535,12.685202083051,6.00066165064361,11.743998262617,13.1576875932644,10.3605856823157,10.8996098952803,13.5810965797975,10.6751318515666,10.756225604018,13.1527223908354,12.3836359733599,14.2537720912172,15.2398284166327,13.5988347265091,9.86232764900462,8.22886205724997,9.58369353260422,10.4911923576821,10.61028841416,11.0107975085937,11.0845136338096,10.2439664808753,7.89209134313529,9.77789619690205,9.53941861818155,12.5753119211625,15.0711858034612,11.4584692087513,11.7751999301334,8.29498427218908,11.7410971630835,8.18760629558929,13.1071342969462,6.31251495827183,7.27951683094401,6.26043156175138
|short_description=p2@Rufy3
}}
}}

Revision as of 18:42, 18 April 2012

Short description:p2@Rufy3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rufy3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000101048, uc008xzw.1, uc008xzx.1_5end
EntrezGene:Rufy3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rufy3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.81
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I511.87
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I616.38
CD326+ enterocyte, pool1.CNhs13542.11848-124I320.57
CD326+ enterocyte, pool2.CNhs13197.11849-124I424.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I715.28
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I810.98
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.74
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E78.73
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.55
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.08
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.39
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.20
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.87
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.44
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.94
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A47.82
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A610.61
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.08
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.14
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I98.36
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.88
GP2+ M cell, pool1.CNhs13228.11845-124H913.21
GP2+ M cell, pool2.CNhs13231.11846-124I19.05
GP2+ M cell, pool3.CNhs13240.11847-124I210.99
Ileum epithelium, pool1.CNhs13199.10252-104B96.27
Ileum epithelium, pool2.CNhs13232.10253-104C19.83
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.51
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F68.98
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F79.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.10
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.90
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.17
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.22
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.49
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.08
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.64
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A27.89
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C330.95
Mouse Granule cells, donor2.CNhs12357.11731-123E334.91
Mouse Granule cells, donor3.CNhs12108.11636-122C725.99
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.10
Mouse Microglia, donor1.CNhs12629.11718-123C86.59
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D514.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F516.07
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D914.72
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F113.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.49
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D220.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F217.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D617.47
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.98
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D435.21
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F436.50
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D833.86
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E411.45
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.93
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D618.56
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F619.08
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E128.52
Mouse Schwann, donor1.CNhs12507.11728-123D911.51
Mouse Schwann, donor2.CNhs12573.11746-123F99.90
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G313.33
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F717.21
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C814.03
Mouse hepatocyte, donor6.CNhs13090.11822-124F418.19
Mouse hepatocyte, donor8.CNhs13091.11824-124F612.99
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A79.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I85.30
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.18
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I817.84
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.04
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B612.10
accessory axillary lymph node, adult.CNhs10475.1063-29H95.70
adrenal gland, adult.CNhs10508.49-24D77.27
adrenal gland, embryo E14.CNhs11038.406-44C56.59
adrenal gland, embryo E16.CNhs11004.1254-43D67.31
adrenal gland, embryo E17.CNhs11043.1263-45I18.07
adrenal gland, embryo E18.CNhs11026.1262-18F57.99
adrenal gland, neonate N00.CNhs11191.1311-23C19.88
adrenal gland, neonate N25.CNhs11223.1377-27I37.92
amnion, adult pregnant day17.5.CNhs10488.583-22A818.29
aorta, adult.CNhs10498.46-23H17.23
bone (os femoris), adult.CNhs10483.56-12G28.85
bone (os femoris), neonate N02.CNhs11227.1985-43F56.47
bone (os femoris), neonate N16.CNhs11225.1525-43A66.85
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B24.39
cerebellum, neonate N30.CNhs11135.1395-42I22.93
colon, adult.CNhs10468.36-18H77.41
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.35
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.05
corpora quadrigemina, adult.CNhs10501.16-22A49.14
corpus striatum, adult.CNhs10487.19-21D85.49
corpus striatum, neonate N00.CNhs11226.630-43F113.95
cortex, adult.CNhs10473.12-14D56.08
cortex, neonate N30.CNhs11107.1392-42F25.63
diencephalon, adult.CNhs10482.20-12F25.82
diencephalon, neonate N30.CNhs11201.1388-42B25.68
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.47
epididymis, adult.CNhs10490.58-23B25.81
eyeball, adult.CNhs10484.31-12G416.41
eyeball, embryo E12.CNhs11016.345-16C67.42
eyeball, embryo E14.CNhs10521.399-16E213.33
eyeball, embryo E15.CNhs10593.426-16C912.78
eyeball, embryo E17.CNhs11023.1261-18D416.28
eyeball, neonate N00.CNhs11207.633-15C612.52
eyeball, neonate N01.CNhs11140.1532-43E713.20
eyeball, neonate N02.CNhs11205.1551-44G814.24
eyeball, neonate N16.CNhs11188.777-19A214.23
forelimb, embryo E11.CNhs10596.335-25E24.74
forelimb, embryo E12.CNhs10600.359-14H25.67
forelimb, embryo E13.CNhs10589.384-1E25.98
forelimb, embryo E14.CNhs10577.413-26A85.92
forelimb, embryo E15.CNhs11007.437-20E76.40
forelimb, embryo E17.CNhs10598.1517-43C411.49
forelimb, embryo E18.CNhs11008.1520-43B510.91
gonad, embryo E13.CNhs11044.1564-45I66.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E96.84
heart, embryo E12.CNhs11015.353-12F56.80
heart, embryo E13.CNhs11013.376-3I97.20
heart, embryo E14.CNhs10597.403-26D47.34
heart, embryo E15.CNhs11017.431-16C89.84
heart, embryo E16.CNhs11021.457-17C66.32
heart, embryo E17.CNhs11025.479-18E57.44
heart, embryo E18.CNhs11030.1283-20G38.85
heart, neonate N00.CNhs11213.639-21E310.98
heart, neonate N03.CNhs11221.1349-25I28.39
heart, neonate N10.CNhs11118.749-24G16.40
heart, neonate N16.CNhs11209.782-15G19.08
heart, neonate N20.CNhs11127.821-26I68.48
heart, neonate N25.CNhs11196.1351-25D36.81
heart, neonate N30.CNhs11202.1390-42D27.65
hippocampus, adult.CNhs10478.13-16E85.68
hippocampus, neonate N00.CNhs11228.627-43G123.77
intestinal mucosa, adult.CNhs10506.860-29I38.92
intestine, adult.CNhs10496.178-9A38.73
intestine, embryo E12.CNhs11019.1251-16I53.63
intestine, embryo E13.CNhs11010.381-16D55.81
intestine, embryo E15.CNhs10602.976-16D87.99
intestine, embryo E16.CNhs10585.463-22H48.07
intestine, embryo E17.CNhs10582.482-18D39.34
intestine, embryo E18.CNhs10526.1289-20F77.23
intestine, neonate N00.CNhs11126.644-26D16.17
intestine, neonate N01.CNhs11192.1322-23E96.26
intestine, neonate N06.CNhs11102.688-20B87.54
intestine, neonate N07.CNhs11095.720-20F26.96
intestine, neonate N10.CNhs11098.755-23A56.24
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E34.32
intestine, neonate N30.CNhs11131.1384-42G19.76
kidney, embryo E14.CNhs10606.411-4I94.17
kidney, embryo E15.CNhs10997.434-16F87.77
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I212.63
kidney, embryo E18.CNhs11001.1288-20C713.77
kidney, neonate N00.CNhs11214.646-21G715.57
kidney, neonate N10.CNhs11206.758-6D518.78
kidney, neonate N20.CNhs11113.832-19I123.17
kidney, neonate N25.CNhs11122.1353-25F324.65
kidney, neonate N30.CNhs11203.1385-42H126.04
liver, adult pregnant day01.CNhs10466.508-5B221.94
liver, embryo E12.CNhs10601.355-15F83.84
liver, embryo E13.CNhs10524.378-3H64.32
liver, embryo E14.CNhs10594.409-16E15.40
liver, embryo E15.CNhs10520.433-16D76.09
liver, embryo E16.CNhs10523.462-17F54.34
liver, embryo E17.CNhs10510.481-18A34.84
liver, embryo E18.CNhs10579.499-43G45.75
liver, neonate N00.CNhs11117.641-24F49.24
liver, neonate N03.CNhs11123.1345-25G28.79
liver, neonate N06.CNhs11101.684-20A814.38
liver, neonate N07.CNhs11103.716-20H210.79
liver, neonate N10.CNhs11115.751-24B99.99
liver, neonate N20.CNhs11220.823-25A311.87
liver, neonate N25.CNhs11198.1368-26H110.05
liver, neonate N30.CNhs11106.1382-42D114.47
lung, adult.CNhs10474.28-22B14.43
lung, embryo E12.CNhs10522.354-16G25.87
lung, embryo E14.CNhs10604.404-26F85.54
lung, embryo E15.CNhs11020.432-17C56.11
lung, embryo E16.CNhs10998.458-17B66.10
lung, embryo E17.CNhs10605.480-44A68.54
lung, embryo E18.CNhs10583.1287-20I67.62
lung, neonate N00.CNhs11224.640-42C614.24
lung, neonate N06.CNhs11212.683-20E58.51
lung, neonate N07.CNhs11111.715-19A35.32
lung, neonate N10.CNhs11219.750-23E69.25
lung, neonate N20.CNhs11109.822-18A46.23
lung, neonate N25.CNhs11119.1359-25C77.94
lung, neonate N30.CNhs11133.1394-42H26.22
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A146.75
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A125.02
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H25.52
medulla oblongata, adult.CNhs10477.17-12C210.92
medulla oblongata, neonate N30.CNhs11200.1396-42A312.42
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.93
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.06
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.79
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.39
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.50
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.91
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.36
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.31
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.91
olfactory brain, adult.CNhs10489.18-22I96.43
ovary, adult.CNhs10507.91-2I77.95
ovary, embryo E18.CNhs11040.505-44H74.63
ovary, neonate N00.CNhs11217.1299-22I46.68
oviduct, adult pregnant day01.CNhs10500.988-6G68.25
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F43.40
pancreas, embryo E15.CNhs11042.1556-45F28.16
pancreas, embryo E16.CNhs11003.460-26E56.41
pancreas, embryo E17.CNhs10599.1558-45G35.32
pancreas, embryo E18.CNhs10580.1535-43I711.38
pancreas, neonate N00.CNhs11105.645-26G98.79
pancreas, neonate N01.CNhs11138.1531-43D76.18
pancreas, neonate N02.CNhs11139.1539-43D89.27
pancreas, neonate N16.CNhs11136.787-43B69.17
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H514.44
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E64.32
pituitary gland, embryo E13.CNhs11009.370-44C72.72
pituitary gland, embryo E14.CNhs11037.398-44A55.79
pituitary gland, embryo E15.CNhs10592.427-16B94.43
pituitary gland, embryo E16.CNhs11036.449-43F64.64
pituitary gland, embryo E17.CNhs11039.1265-44F56.91
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I73.75
placenta, adult pregnant day17.CNhs10464.577-18G318.64
prostate, adult.CNhs10470.859-1F826.90
skin, adult.CNhs10492.30-1C316.65
skin, neonate N00.CNhs11124.650-25G412.11
skin, neonate N03.CNhs11215.662-22H311.70
skin, neonate N06.CNhs11097.693-20I510.86
skin, neonate N10.CNhs11108.762-6C411.49
small intestine, neonate N16.CNhs11114.790-21I17.00
spinal cord, adult.CNhs10505.24-13C917.24
spleen, adult.CNhs10465.25-2G25.64
spleen, embryo E16.CNhs11035.461-43C17.22
spleen, embryo E18.CNhs11011.1271-21F25.19
spleen, neonate N10.CNhs11116.752-24D12.64
spleen, neonate N20.CNhs11112.824-19H12.19
spleen, neonate N25.CNhs11099.1354-25G32.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.25
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.87
stomach, adult.CNhs10503.33-1H611.46
stomach, embryo E12.CNhs10588.356-43E35.38
stomach, embryo E15.CNhs10603.1252-16G87.52
stomach, embryo E16.CNhs11022.459-17D46.80
stomach, embryo E17.CNhs11006.1035-18D510.87
stomach, embryo E18.CNhs10999.1286-20C67.42
stomach, neonate N03.CNhs11193.1340-24B87.96
stomach, neonate N07.CNhs11210.718-18A910.41
stomach, neonate N25.CNhs11104.1355-25E413.35
stomach, neonate N30.CNhs11134.1386-42I112.05
submandibular gland, adult.CNhs10469.59-29C16.21
testis, adult.CNhs10504.57-7G53.95
testis, embryo E13.CNhs11031.389-23F57.92
testis, embryo E15.CNhs11034.443-27C55.13
testis, embryo E16.CNhs11033.470-26G56.81
testis, embryo E17.CNhs11029.486-18I56.33
testis, embryo E18.CNhs11027.503-18G56.42
testis, neonate N00.CNhs11189.1300-22B76.69
testis, neonate N07.CNhs11222.726-26I47.81
testis, neonate N10.CNhs11204.763-44D911.53
testis, neonate N20.CNhs11110.839-18H311.60
testis, neonate N30.CNhs11130.1391-42E28.06
thymus, adult.CNhs10471.38-12B54.74
thymus, embryo E14.CNhs11041.402-44I47.30
thymus, embryo E15.CNhs11005.430-45I26.47
thymus, embryo E16.CNhs11002.456-26C57.67
thymus, embryo E17.CNhs10581.478-18C18.06
thymus, embryo E18.CNhs10595.1273-19G47.35
thymus, neonate N02.CNhs11181.1541-43F84.81
thymus, neonate N03.CNhs11137.2104-43C74.87
thymus, neonate N06.CNhs11197.681-26C44.34
thymus, neonate N07.CNhs11211.713-19D34.95
thymus, neonate N10.CNhs11194.748-24E44.44
thymus, neonate N20.CNhs11186.820-7A25.26
thymus, neonate N25.CNhs11125.1362-25G76.06
thymus, neonate N30.CNhs11132.1393-42G25.38
tongue, adult.CNhs10499.32-1B49.52
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.87
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.69
urinary bladder, adult.CNhs10481.879-12E413.14
uterus, adult pregnant day19.CNhs10497.590-15F59.20
uterus, adult.CNhs10509.92-27E59.89
vagina, adult.CNhs10502.89-27D59.86
vesicular gland, adult.CNhs10491.51-27F815.55
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.50
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I86.54
whole body, embryo E12.CNhs10587.857-27C98.38
whole body, embryo E13.CNhs10512.372-23H27.34
whole body, embryo E14.5.CNhs10578.420-27D213.61
whole body, embryo E14.CNhs10519.395-14B17.76
whole body, embryo E16.CNhs10514.453-14F212.69
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G511.74
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G513.16
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.36
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.90
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.68
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G510.76
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G513.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G512.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G514.25
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G515.24
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G513.60
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.86
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.23
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G59.58
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.49
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.01
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G511.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.24
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.78
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G512.58
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G515.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.78
whole body, embryo E17.5.CNhs10513.490-9F98.29
whole body, embryo E17.CNhs10517.475-3I511.74
whole body, embryo E18.CNhs10516.493-3B38.19
whole body, neonate N00.CNhs10525.657-19C213.11
whole body, neonate N01.CNhs10576.659-23C66.31
whole body, neonate N06.CNhs10515.692-21D17.28
whole body, neonate N10.CNhs10518.761-6B46.26





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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