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FFCP PHASE1:Mm9::chr3:69525918..69525993,+: Difference between revisions

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|description=CAGE_peak_1_at_Nmd3_5end
|description=CAGE_peak_1_at_Nmd3_5end
|id=chr3:69525918..69525993,+
|id=chr3:69525918..69525993,+
|ontology_enrichment_celltype=CL:0000988!6.20e-12!32;CL:0002032!6.20e-12!32;CL:0000037!6.20e-12!32;CL:0000566!6.20e-12!32;CL:0000837!6.20e-12!32;CL:0000542!1.14e-08!13;CL:0000051!1.14e-08!13;CL:0002031!2.63e-08!25;CL:0000838!2.72e-08!12;CL:0000084!9.13e-08!11;CL:0000827!9.13e-08!11
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=34.4320021275307,21.287499866001,19.5649672937501,23.8946726932396,23.5420993074783,30.7219067598758,34.8082834487333,56.1686456970857,167.538579360483,152.844135688262,156.322004989886,132.501556091254,62.6594671548213,56.5610003650913,45.9691471305615,44.3420835583719,48.2697695908421,59.6223492527069,53.7488579734496,42.8633548316011,36.1433983142047,56.5958421845046,71.0463426457904,34.8783481689627,42.2113077163593,18.9496548157957,25.8457197695445,25.210134224249,30.4037471130198,35.2842181663903,30.8205409810874,67.9482820601805,47.9750534315965,47.5445043046316,46.7939623997065,47.3768739271703,54.3090487657902,16.7412652294763,28.9094077473806,30.8879008944541,16.4704816648684,25.2726829434625,27.1885797697446,42.301330839794,45.7209959800011,42.7663932536718,9.38869613217647,6.75877984779384,9.44650585758229,10.6936444490856,8.81914456239784,7.18762821824858,66.4419119988636,66.7333170650437,66.5465722302079,27.2695002198104,26.0745430344269,26.2992767061496,15.9830004079082,16.9277113367051,20.9164363157039,11.1818695582814,10.6715375533337,9.89889689009539,5.93319817540185,7.8152812644071,7.49000276296012,8.4528027170742,27.6851264863635,19.1708432431001,22.7150958259493,21.7094748146891,18.1112203580323,25.6005770359254,19.456630616702,27.5765635983006,37.4393995397922,29.1127130834228,26.5739302533301,14.1118327871307,17.6571152152651,26.5665818983948,27.080750903134,28.138130501584,26.2812986176113,25.9273155216828,23.9184423742493,31.8743052361264,78.7552410665114,38.2392094140335,22.3195656300292,41.3003460951065,110.835327394363,32.382191498269,35.0879265421741,54.2112533387776,39.043548796627,30.3365974188943,32.7330365799615,22.9670723431721,32.3939865486365,24.3820307087204,7.64415719119937,0,67.76169583651,62.0731670413992,70.2678978570549,39.8501740219519,81.8243712325063,47.9468109179384,37.2993452547192,38.9715812239541,33.6698625993845,45.518237446892,51.6214424325744,41.2186419561336,39.5511948374998,38.6080282976164,34.4998115260451,30.8974683399552,29.3719219552323,29.0925151881133,44.7340226923493,40.110969190582,32.673686262899,30.9103036802396,69.4927722134338,68.9888140642419,69.7615546631125,32.953940669061,37.972550033946,34.8062555352634,43.2822557278768,36.3115949409069,33.2460871295296,36.17980166411,33.0977932513528,28.9868241521517,34.1175723885461,33.0393713741764,38.645771559923,38.39365144039,36.3725502206805,36.6212707340788,34.4945050697232,39.5871395680186,29.7971484099938,29.4921842642478,30.8262229893964,38.9558525145708,36.2459315777735,36.1672958505498,37.2583313962301,33.432207986128,35.6003095985742,33.4377568255069,82.1589429156485,59.7047144506139,58.8218443748877,29.4118597000413,33.5372265772968,35.832350230742,35.7484550733667,37.3852040320067,35.7899701898718,43.4838476683263,37.8265495973463,42.8528806487512,38.1778851799275,38.2510191304292,25.9420190546738,31.7253972712971,36.0062189077323,29.7938249648025,43.9505992499026,30.4597652642682,18.8338706300765,28.0317600663357,49.4828741241743,47.144044387669,42.3973947749687,42.5552236955253,30.0210359190575,35.7624177091611,31.7934471234823,43.4805240471389,30.4115602648326,33.6236437749545,28.6597208065107,26.9645822596266,37.1757445784474,40.8239610171453,28.6398530439153,43.1859377664775,47.3372489826938,41.1375682247535,29.8686830238144,40.1176889772622,35.0962781039628,38.0834181787374,40.0346755995506,34.9213973898695,63.4408621966499,49.3861512919638,42.6533019395651,44.9724224769707,37.3262623354845,40.517762838406,42.0132655439343,29.6327021574335,70.6909588739154,48.5973701342904,37.3797336971122,37.2140947668503,43.0611988898094,56.3250897822059,53.2810318160079,57.8932225636041,29.7452636168234,41.3091277659657,41.7190339691586,41.7572911006963,35.4382274915638,33.668757745805,28.0891496245496,29.2700471786698,35.9408128562115,30.5621271715309,28.3829488210327,29.9869865929801,34.5369963731791,30.6656004192805,30.1582567878545,50.58322859514,30.9811492001993,39.183017975272,36.1238827472532,30.7094618871572,54.4264018650562,36.6082844446341,43.8556424988597,42.9482618726302,38.7762115919038,37.0401636826456,40.1037613348309,35.3845663486041,41.6955022725141,37.7010056705592,34.3900366813475,48.1981974632711,37.7560626653995,21.9020692510724,37.1382267326153,31.8392337336993,19.9117707509944,44.1860757802066,31.4416499243341,36.2121753131324,15.3556984298002,39.9665692327106,46.0002361839434,45.0781824552107,43.1361827845513,48.3536239641798,27.4088382294997,22.6898195146011,32.3417625466099,35.8321577122307,16.1698354728443,31.5075441496441,36.0000674293815,26.2202161875044,30.2770197907903,17.3545020995322,54.4438362707808,39.1889331098067,30.8739757276947,30.1741842882908,41.6578220875436,38.9621495035887,39.392873521035,44.4821838309116,34.6862195589522,28.1846459055975,32.8072091131877,32.6091251381892,47.4097990066462,44.6433243101118,34.5836396134194,41.8664056967936,84.8192365669338,81.3117938000453,73.2459861163446,42.005507192665,39.5419991976419,44.5269633007799,38.8819226958485,38.2631581706478,38.4318112193273,40.3244395690614,40.9961140397666,40.3104150655406,35.5145026819512,34.1736622197809,117.811824184996,36.6315537807748,30.7752792250202,36.751274597025,31.2566772816109,34.6360057256095,41.7791769578884,37.1082496805258,63.0204659998522,115.477209754831,78.0561316958815,42.0294790435477,34.8687370299082,43.1386020092274,45.9919713341394,45.4727806995403,48.8756132761912,45.3136844690283,43.5684105165003,49.271627574696,47.8578745793399,49.6064830873255,40.4450205069973,47.1438024037614,48.8545451118958,53.5083705331899,84.5766482355186,77.4230582539775,77.2269235274761,27.2397327585389,32.6567507285057,41.2091154601346,46.0892015019992,24.0754609936974,41.7916363536629,35.9053684475598,44.1129545348335,30.4180132748327,43.1601987455505,43.8128460486026,43.8764625150674,38.727623477283,49.8456649882625,34.6899408873719,32.1740777510948,40.7005370869052,37.3906596601554,31.6038732188782,36.053463972013,20.5904729464016,34.8927362648536,34.6138896161342,31.1291633304061,25.2697211763797,29.9105573870483,34.5186204736519,32.2126785696396,30.4759725447178,30.0387502637857,23.3383908728706,30.3616933975521,33.5662043606847,32.5547861634612,34.0029505510458,32.5725789766145,32.4780725271588,30.5198323132571,30.8134403260536,35.1969082753336,31.0535610962453,30.548971469753,28.9376682581627,36.2596983968451,31.4239672128334,29.7773895491677,27.97527299466,40.1046422306296,31.1423050783792,28.3572718142278,23.232383748229,33.6861516161388,31.8009159991481,32.3277281196345,34.4122613826444,46.3735671240843
|phase1_expression=34.4320021275307,21.287499866001,19.5649672937501,23.8946726932396,23.5420993074783,30.7219067598758,34.8082834487333,56.1686456970857,167.538579360483,152.844135688262,156.322004989886,132.501556091254,62.6594671548213,56.5610003650913,45.9691471305615,44.3420835583719,48.2697695908421,59.6223492527069,53.7488579734496,42.8633548316011,36.1433983142047,56.5958421845046,71.0463426457904,34.8783481689627,42.2113077163593,18.9496548157957,25.8457197695445,25.210134224249,30.4037471130198,35.2842181663903,30.8205409810874,67.9482820601805,47.9750534315965,47.5445043046316,46.7939623997065,47.3768739271703,54.3090487657902,16.7412652294763,28.9094077473806,30.8879008944541,16.4704816648684,25.2726829434625,27.1885797697446,42.301330839794,45.7209959800011,42.7663932536718,9.38869613217647,6.75877984779384,9.44650585758229,10.6936444490856,8.81914456239784,7.18762821824858,66.4419119988636,66.7333170650437,66.5465722302079,27.2695002198104,26.0745430344269,26.2992767061496,15.9830004079082,16.9277113367051,20.9164363157039,11.1818695582814,10.6715375533337,9.89889689009539,5.93319817540185,7.8152812644071,7.49000276296012,8.4528027170742,27.6851264863635,19.1708432431001,22.7150958259493,21.7094748146891,18.1112203580323,25.6005770359254,19.456630616702,27.5765635983006,37.4393995397922,29.1127130834228,26.5739302533301,14.1118327871307,17.6571152152651,26.5665818983948,27.080750903134,28.138130501584,26.2812986176113,25.9273155216828,23.9184423742493,31.8743052361264,78.7552410665114,38.2392094140335,22.3195656300292,41.3003460951065,110.835327394363,32.382191498269,35.0879265421741,54.2112533387776,39.043548796627,30.3365974188943,32.7330365799615,22.9670723431721,32.3939865486365,24.3820307087204,7.64415719119937,0,67.76169583651,62.0731670413992,70.2678978570549,39.8501740219519,81.8243712325063,47.9468109179384,37.2993452547192,38.9715812239541,33.6698625993845,45.518237446892,51.6214424325744,41.2186419561336,39.5511948374998,38.6080282976164,34.4998115260451,30.8974683399552,29.3719219552323,29.0925151881133,44.7340226923493,40.110969190582,32.673686262899,30.9103036802396,69.4927722134338,68.9888140642419,69.7615546631125,32.953940669061,37.972550033946,34.8062555352634,43.2822557278768,36.3115949409069,33.2460871295296,36.17980166411,33.0977932513528,28.9868241521517,34.1175723885461,33.0393713741764,38.645771559923,38.39365144039,36.3725502206805,36.6212707340788,34.4945050697232,39.5871395680186,29.7971484099938,29.4921842642478,30.8262229893964,38.9558525145708,36.2459315777735,36.1672958505498,37.2583313962301,33.432207986128,35.6003095985742,33.4377568255069,82.1589429156485,59.7047144506139,58.8218443748877,29.4118597000413,33.5372265772968,35.832350230742,35.7484550733667,37.3852040320067,35.7899701898718,43.4838476683263,37.8265495973463,42.8528806487512,38.1778851799275,38.2510191304292,25.9420190546738,31.7253972712971,36.0062189077323,29.7938249648025,43.9505992499026,30.4597652642682,18.8338706300765,28.0317600663357,49.4828741241743,47.144044387669,42.3973947749687,42.5552236955253,30.0210359190575,35.7624177091611,31.7934471234823,43.4805240471389,30.4115602648326,33.6236437749545,28.6597208065107,26.9645822596266,37.1757445784474,40.8239610171453,28.6398530439153,43.1859377664775,47.3372489826938,41.1375682247535,29.8686830238144,40.1176889772622,35.0962781039628,38.0834181787374,40.0346755995506,34.9213973898695,63.4408621966499,49.3861512919638,42.6533019395651,44.9724224769707,37.3262623354845,40.517762838406,42.0132655439343,29.6327021574335,70.6909588739154,48.5973701342904,37.3797336971122,37.2140947668503,43.0611988898094,56.3250897822059,53.2810318160079,57.8932225636041,29.7452636168234,41.3091277659657,41.7190339691586,41.7572911006963,35.4382274915638,33.668757745805,28.0891496245496,29.2700471786698,35.9408128562115,30.5621271715309,28.3829488210327,29.9869865929801,34.5369963731791,30.6656004192805,30.1582567878545,50.58322859514,30.9811492001993,39.183017975272,36.1238827472532,30.7094618871572,54.4264018650562,36.6082844446341,43.8556424988597,42.9482618726302,38.7762115919038,37.0401636826456,40.1037613348309,35.3845663486041,41.6955022725141,37.7010056705592,34.3900366813475,48.1981974632711,37.7560626653995,21.9020692510724,37.1382267326153,31.8392337336993,19.9117707509944,44.1860757802066,31.4416499243341,36.2121753131324,15.3556984298002,39.9665692327106,46.0002361839434,45.0781824552107,43.1361827845513,48.3536239641798,27.4088382294997,22.6898195146011,32.3417625466099,35.8321577122307,16.1698354728443,31.5075441496441,36.0000674293815,26.2202161875044,30.2770197907903,17.3545020995322,54.4438362707808,39.1889331098067,30.8739757276947,30.1741842882908,41.6578220875436,38.9621495035887,39.392873521035,44.4821838309116,34.6862195589522,28.1846459055975,32.8072091131877,32.6091251381892,47.4097990066462,44.6433243101118,34.5836396134194,41.8664056967936,84.8192365669338,81.3117938000453,73.2459861163446,42.005507192665,39.5419991976419,44.5269633007799,38.8819226958485,38.2631581706478,38.4318112193273,40.3244395690614,40.9961140397666,40.3104150655406,35.5145026819512,34.1736622197809,117.811824184996,36.6315537807748,30.7752792250202,36.751274597025,31.2566772816109,34.6360057256095,41.7791769578884,37.1082496805258,63.0204659998522,115.477209754831,78.0561316958815,42.0294790435477,34.8687370299082,43.1386020092274,45.9919713341394,45.4727806995403,48.8756132761912,45.3136844690283,43.5684105165003,49.271627574696,47.8578745793399,49.6064830873255,40.4450205069973,47.1438024037614,48.8545451118958,53.5083705331899,84.5766482355186,77.4230582539775,77.2269235274761,27.2397327585389,32.6567507285057,41.2091154601346,46.0892015019992,24.0754609936974,41.7916363536629,35.9053684475598,44.1129545348335,30.4180132748327,43.1601987455505,43.8128460486026,43.8764625150674,38.727623477283,49.8456649882625,34.6899408873719,32.1740777510948,40.7005370869052,37.3906596601554,31.6038732188782,36.053463972013,20.5904729464016,34.8927362648536,34.6138896161342,31.1291633304061,25.2697211763797,29.9105573870483,34.5186204736519,32.2126785696396,30.4759725447178,30.0387502637857,23.3383908728706,30.3616933975521,33.5662043606847,32.5547861634612,34.0029505510458,32.5725789766145,32.4780725271588,30.5198323132571,30.8134403260536,35.1969082753336,31.0535610962453,30.548971469753,28.9376682581627,36.2596983968451,31.4239672128334,29.7773895491677,27.97527299466,40.1046422306296,31.1423050783792,28.3572718142278,23.232383748229,33.6861516161388,31.8009159991481,32.3277281196345,34.4122613826444,46.3735671240843
|short_description=p1@Nmd3
|short_description=p1@Nmd3
}}
}}

Revision as of 19:20, 18 April 2012

Short description:p1@Nmd3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nmd3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000143041, NM_133787, uc008pmk.1, uc008pml.1_5end
EntrezGene:Nmd3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nmd3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G734.43
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I521.29
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I619.56
CD326+ enterocyte, pool1.CNhs13542.11848-124I323.89
CD326+ enterocyte, pool2.CNhs13197.11849-124I423.54
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I730.72
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I834.81
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E956.17
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7167.54
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2152.84
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6156.32
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1132.50
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E462.66
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E856.56
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A145.97
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A344.34
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A548.27
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A259.62
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A453.75
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A642.86
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A336.14
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H256.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I971.05
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D134.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D242.21
GP2+ M cell, pool1.CNhs13228.11845-124H918.95
GP2+ M cell, pool2.CNhs13231.11846-124I125.85
GP2+ M cell, pool3.CNhs13240.11847-124I225.21
Ileum epithelium, pool1.CNhs13199.10252-104B930.40
Ileum epithelium, pool2.CNhs13232.10253-104C135.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C830.82
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I367.95
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G647.98
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E947.54
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F546.79
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F647.38
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F754.31
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G816.74
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H128.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H330.89
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G916.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H225.27
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H427.19
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D842.30
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D945.72
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B342.77
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B79.39
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.76
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B89.45
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C310.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A266.44
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I966.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A166.55
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C127.27
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E126.07
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C526.30
Mouse Granule cells, donor1.CNhs12131.11713-123C315.98
Mouse Granule cells, donor2.CNhs12357.11731-123E316.93
Mouse Granule cells, donor3.CNhs12108.11636-122C720.92
Mouse Meningeal cells, donor1.CNhs12132.11716-123C611.18
Mouse Meningeal cells, donor3.CNhs12109.11639-122D110.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.82
Mouse Microglia, donor1.CNhs12629.11718-123C87.49
Mouse Microglia, donor2.CNhs12634.11736-123E88.45
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D527.69
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F519.17
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D922.72
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F121.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D518.11
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D225.60
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F219.46
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D627.58
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D337.44
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F329.11
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D726.57
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D414.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F417.66
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D826.57
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E427.08
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E528.14
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I626.28
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D625.93
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F623.92
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E131.87
Mouse Schwann, donor1.CNhs12507.11728-123D978.76
Mouse Schwann, donor2.CNhs12573.11746-123F938.24
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G322.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F741.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C4110.84
Mouse hepatocyte, donor3.CNhs12615.11637-122C832.38
Mouse hepatocyte, donor6.CNhs13090.11822-124F435.09
Mouse hepatocyte, donor8.CNhs13091.11824-124F654.21
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A739.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I730.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E332.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I822.97
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G632.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H124.38
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G167.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G262.07
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G370.27
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B639.85
accessory axillary lymph node, adult.CNhs10475.1063-29H981.82
adrenal gland, adult.CNhs10508.49-24D747.95
adrenal gland, embryo E14.CNhs11038.406-44C537.30
adrenal gland, embryo E16.CNhs11004.1254-43D638.97
adrenal gland, embryo E17.CNhs11043.1263-45I133.67
adrenal gland, embryo E18.CNhs11026.1262-18F545.52
adrenal gland, neonate N00.CNhs11191.1311-23C151.62
adrenal gland, neonate N25.CNhs11223.1377-27I341.22
amnion, adult pregnant day17.5.CNhs10488.583-22A839.55
aorta, adult.CNhs10498.46-23H138.61
bone (os femoris), adult.CNhs10483.56-12G234.50
bone (os femoris), neonate N02.CNhs11227.1985-43F530.90
bone (os femoris), neonate N16.CNhs11225.1525-43A629.37
bone (os femoris), neonate N20.CNhs11195.1350-25C329.09
cecum, adult.CNhs10467.37-13H444.73
cerebellum, adult.CNhs10494.15-8B240.11
cerebellum, neonate N30.CNhs11135.1395-42I232.67
colon, adult.CNhs10468.36-18H730.91
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C769.49
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D168.99
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D469.76
corpora quadrigemina, adult.CNhs10501.16-22A432.95
corpus striatum, adult.CNhs10487.19-21D837.97
corpus striatum, neonate N00.CNhs11226.630-43F134.81
cortex, adult.CNhs10473.12-14D543.28
cortex, neonate N30.CNhs11107.1392-42F236.31
diencephalon, adult.CNhs10482.20-12F233.25
diencephalon, neonate N30.CNhs11201.1388-42B236.18
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B133.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A228.99
epididymis, adult.CNhs10490.58-23B234.12
eyeball, adult.CNhs10484.31-12G433.04
eyeball, embryo E12.CNhs11016.345-16C638.65
eyeball, embryo E14.CNhs10521.399-16E238.39
eyeball, embryo E15.CNhs10593.426-16C936.37
eyeball, embryo E17.CNhs11023.1261-18D436.62
eyeball, neonate N00.CNhs11207.633-15C634.49
eyeball, neonate N01.CNhs11140.1532-43E739.59
eyeball, neonate N02.CNhs11205.1551-44G829.80
eyeball, neonate N16.CNhs11188.777-19A229.49
forelimb, embryo E11.CNhs10596.335-25E230.83
forelimb, embryo E12.CNhs10600.359-14H238.96
forelimb, embryo E13.CNhs10589.384-1E236.25
forelimb, embryo E14.CNhs10577.413-26A836.17
forelimb, embryo E15.CNhs11007.437-20E737.26
forelimb, embryo E17.CNhs10598.1517-43C433.43
forelimb, embryo E18.CNhs11008.1520-43B535.60
gonad, embryo E13.CNhs11044.1564-45I633.44
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C882.16
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D259.70
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D558.82
heart, embryo E11.CNhs10586.331-24E929.41
heart, embryo E12.CNhs11015.353-12F533.54
heart, embryo E13.CNhs11013.376-3I935.83
heart, embryo E14.CNhs10597.403-26D435.75
heart, embryo E15.CNhs11017.431-16C837.39
heart, embryo E16.CNhs11021.457-17C635.79
heart, embryo E17.CNhs11025.479-18E543.48
heart, embryo E18.CNhs11030.1283-20G337.83
heart, neonate N00.CNhs11213.639-21E342.85
heart, neonate N03.CNhs11221.1349-25I238.18
heart, neonate N10.CNhs11118.749-24G138.25
heart, neonate N16.CNhs11209.782-15G125.94
heart, neonate N20.CNhs11127.821-26I631.73
heart, neonate N25.CNhs11196.1351-25D336.01
heart, neonate N30.CNhs11202.1390-42D229.79
hippocampus, adult.CNhs10478.13-16E843.95
hippocampus, neonate N00.CNhs11228.627-43G130.46
intestinal mucosa, adult.CNhs10506.860-29I318.83
intestine, adult.CNhs10496.178-9A328.03
intestine, embryo E12.CNhs11019.1251-16I549.48
intestine, embryo E13.CNhs11010.381-16D547.14
intestine, embryo E15.CNhs10602.976-16D842.40
intestine, embryo E16.CNhs10585.463-22H442.56
intestine, embryo E17.CNhs10582.482-18D330.02
intestine, embryo E18.CNhs10526.1289-20F735.76
intestine, neonate N00.CNhs11126.644-26D131.79
intestine, neonate N01.CNhs11192.1322-23E943.48
intestine, neonate N06.CNhs11102.688-20B830.41
intestine, neonate N07.CNhs11095.720-20F233.62
intestine, neonate N10.CNhs11098.755-23A528.66
intestine, neonate N20.CNhs11187.827-18D126.96
intestine, neonate N25.CNhs11121.1352-25E337.18
intestine, neonate N30.CNhs11131.1384-42G140.82
kidney, embryo E14.CNhs10606.411-4I928.64
kidney, embryo E15.CNhs10997.434-16F843.19
kidney, embryo E16.CNhs10584.464-22A547.34
kidney, embryo E17.CNhs11028.483-18I241.14
kidney, embryo E18.CNhs11001.1288-20C729.87
kidney, neonate N00.CNhs11214.646-21G740.12
kidney, neonate N10.CNhs11206.758-6D535.10
kidney, neonate N20.CNhs11113.832-19I138.08
kidney, neonate N25.CNhs11122.1353-25F340.03
kidney, neonate N30.CNhs11203.1385-42H134.92
liver, adult pregnant day01.CNhs10466.508-5B263.44
liver, embryo E12.CNhs10601.355-15F849.39
liver, embryo E13.CNhs10524.378-3H642.65
liver, embryo E14.CNhs10594.409-16E144.97
liver, embryo E15.CNhs10520.433-16D737.33
liver, embryo E16.CNhs10523.462-17F540.52
liver, embryo E17.CNhs10510.481-18A342.01
liver, embryo E18.CNhs10579.499-43G429.63
liver, neonate N00.CNhs11117.641-24F470.69
liver, neonate N03.CNhs11123.1345-25G248.60
liver, neonate N06.CNhs11101.684-20A837.38
liver, neonate N07.CNhs11103.716-20H237.21
liver, neonate N10.CNhs11115.751-24B943.06
liver, neonate N20.CNhs11220.823-25A356.33
liver, neonate N25.CNhs11198.1368-26H153.28
liver, neonate N30.CNhs11106.1382-42D157.89
lung, adult.CNhs10474.28-22B129.75
lung, embryo E12.CNhs10522.354-16G241.31
lung, embryo E14.CNhs10604.404-26F841.72
lung, embryo E15.CNhs11020.432-17C541.76
lung, embryo E16.CNhs10998.458-17B635.44
lung, embryo E17.CNhs10605.480-44A633.67
lung, embryo E18.CNhs10583.1287-20I628.09
lung, neonate N00.CNhs11224.640-42C629.27
lung, neonate N06.CNhs11212.683-20E535.94
lung, neonate N07.CNhs11111.715-19A330.56
lung, neonate N10.CNhs11219.750-23E628.38
lung, neonate N20.CNhs11109.822-18A429.99
lung, neonate N25.CNhs11119.1359-25C734.54
lung, neonate N30.CNhs11133.1394-42H230.67
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A130.16
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A150.58
mammary gland, adult lactating day02.CNhs10480.595-22B630.98
mammary gland, adult pregnant day19.CNhs10476.588-5H239.18
medulla oblongata, adult.CNhs10477.17-12C236.12
medulla oblongata, neonate N30.CNhs11200.1396-42A330.71
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C754.43
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C236.61
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E143.86
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E242.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E338.78
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D737.04
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D840.10
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D935.38
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D441.70
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D537.70
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D634.39
olfactory brain, adult.CNhs10489.18-22I948.20
ovary, adult.CNhs10507.91-2I737.76
ovary, embryo E18.CNhs11040.505-44H721.90
ovary, neonate N00.CNhs11217.1299-22I437.14
oviduct, adult pregnant day01.CNhs10500.988-6G631.84
pancreas, adult.CNhs10486.34-16E419.91
pancreas, embryo E14.CNhs11012.405-44F444.19
pancreas, embryo E15.CNhs11042.1556-45F231.44
pancreas, embryo E16.CNhs11003.460-26E536.21
pancreas, embryo E17.CNhs10599.1558-45G315.36
pancreas, embryo E18.CNhs10580.1535-43I739.97
pancreas, neonate N00.CNhs11105.645-26G946.00
pancreas, neonate N01.CNhs11138.1531-43D745.08
pancreas, neonate N02.CNhs11139.1539-43D843.14
pancreas, neonate N16.CNhs11136.787-43B648.35
pancreas, neonate N25.CNhs11094.1555-45E227.41
pancreas, neonate N30.CNhs11182.1548-44H522.69
pituitary gland, adult.CNhs10493.21-1G832.34
pituitary gland, embryo E12.CNhs11018.346-16E635.83
pituitary gland, embryo E13.CNhs11009.370-44C716.17
pituitary gland, embryo E14.CNhs11037.398-44A531.51
pituitary gland, embryo E15.CNhs10592.427-16B936.00
pituitary gland, embryo E16.CNhs11036.449-43F626.22
pituitary gland, embryo E17.CNhs11039.1265-44F530.28
pituitary gland, neonate N00.CNhs11190.1308-22E917.35
placenta, adult pregnant day10.CNhs10472.539-13I754.44
placenta, adult pregnant day17.CNhs10464.577-18G339.19
prostate, adult.CNhs10470.859-1F830.87
skin, adult.CNhs10492.30-1C330.17
skin, neonate N00.CNhs11124.650-25G441.66
skin, neonate N03.CNhs11215.662-22H338.96
skin, neonate N06.CNhs11097.693-20I539.39
skin, neonate N10.CNhs11108.762-6C444.48
small intestine, neonate N16.CNhs11114.790-21I134.69
spinal cord, adult.CNhs10505.24-13C928.18
spleen, adult.CNhs10465.25-2G232.81
spleen, embryo E16.CNhs11035.461-43C132.61
spleen, embryo E18.CNhs11011.1271-21F247.41
spleen, neonate N10.CNhs11116.752-24D144.64
spleen, neonate N20.CNhs11112.824-19H134.58
spleen, neonate N25.CNhs11099.1354-25G341.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C684.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C981.31
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D373.25
stomach, adult.CNhs10503.33-1H642.01
stomach, embryo E12.CNhs10588.356-43E339.54
stomach, embryo E15.CNhs10603.1252-16G844.53
stomach, embryo E16.CNhs11022.459-17D438.88
stomach, embryo E17.CNhs11006.1035-18D538.26
stomach, embryo E18.CNhs10999.1286-20C638.43
stomach, neonate N03.CNhs11193.1340-24B840.32
stomach, neonate N07.CNhs11210.718-18A941.00
stomach, neonate N25.CNhs11104.1355-25E440.31
stomach, neonate N30.CNhs11134.1386-42I135.51
submandibular gland, adult.CNhs10469.59-29C134.17
testis, adult.CNhs10504.57-7G5117.81
testis, embryo E13.CNhs11031.389-23F536.63
testis, embryo E15.CNhs11034.443-27C530.78
testis, embryo E16.CNhs11033.470-26G536.75
testis, embryo E17.CNhs11029.486-18I531.26
testis, embryo E18.CNhs11027.503-18G534.64
testis, neonate N00.CNhs11189.1300-22B741.78
testis, neonate N07.CNhs11222.726-26I437.11
testis, neonate N10.CNhs11204.763-44D963.02
testis, neonate N20.CNhs11110.839-18H3115.48
testis, neonate N30.CNhs11130.1391-42E278.06
thymus, adult.CNhs10471.38-12B542.03
thymus, embryo E14.CNhs11041.402-44I434.87
thymus, embryo E15.CNhs11005.430-45I243.14
thymus, embryo E16.CNhs11002.456-26C545.99
thymus, embryo E17.CNhs10581.478-18C145.47
thymus, embryo E18.CNhs10595.1273-19G448.88
thymus, neonate N02.CNhs11181.1541-43F845.31
thymus, neonate N03.CNhs11137.2104-43C743.57
thymus, neonate N06.CNhs11197.681-26C449.27
thymus, neonate N07.CNhs11211.713-19D347.86
thymus, neonate N10.CNhs11194.748-24E449.61
thymus, neonate N20.CNhs11186.820-7A240.45
thymus, neonate N25.CNhs11125.1362-25G747.14
thymus, neonate N30.CNhs11132.1393-42G248.85
tongue, adult.CNhs10499.32-1B453.51
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H384.58
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F777.42
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G577.23
urinary bladder, adult.CNhs10481.879-12E427.24
uterus, adult pregnant day19.CNhs10497.590-15F532.66
uterus, adult.CNhs10509.92-27E541.21
vagina, adult.CNhs10502.89-27D546.09
vesicular gland, adult.CNhs10491.51-27F824.08
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A141.79
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A235.91
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A344.11
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D730.42
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A443.16
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A543.81
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A643.88
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A738.73
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A849.85
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A934.69
whole body, embryo E11.CNhs11014.324-5I832.17
whole body, embryo E12.CNhs10587.857-27C940.70
whole body, embryo E13.CNhs10512.372-23H237.39
whole body, embryo E14.5.CNhs10578.420-27D231.60
whole body, embryo E14.CNhs10519.395-14B136.05
whole body, embryo E16.CNhs10514.453-14F220.59
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G534.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G534.61
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G531.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G525.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G529.91
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G534.52
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G532.21
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G530.48
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G530.04
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G523.34
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G530.36
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G533.57
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G532.55
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G534.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G532.57
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G532.48
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G530.52
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G530.81
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G535.20
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G531.05
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G530.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G528.94
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G536.26
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G531.42
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G529.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G527.98
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G540.10
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G531.14
whole body, embryo E17.5.CNhs10513.490-9F928.36
whole body, embryo E17.CNhs10517.475-3I523.23
whole body, embryo E18.CNhs10516.493-3B333.69
whole body, neonate N00.CNhs10525.657-19C231.80
whole body, neonate N01.CNhs10576.659-23C632.33
whole body, neonate N06.CNhs10515.692-21D134.41
whole body, neonate N10.CNhs10518.761-6B446.37





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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