FFCP PHASE1:Mm9::chr2:104966683..104966700,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=329480 | |EntrezGene=329480 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=743 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-16bp_to_ENSMUST00000172701,NR_015462,uc008lkn.1_5end | |association_with_transcript=-16bp_to_ENSMUST00000172701,NR_015462,uc008lkn.1_5end | ||
|cluster_id=chr2:104966683..104966700,- | |||
|description=CAGE_peak_3_at_AI314831_5end | |description=CAGE_peak_3_at_AI314831_5end | ||
|id=chr2:104966683..104966700,- | |id=chr2:104966683..104966700,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!4.19e-17!26;UBERON:0000990!4.19e-17!26;UBERON:0003133!7.30e-16!24;UBERON:0000991!3.27e-15!18;UBERON:0005564!3.27e-15!18;UBERON:0004176!3.54e-14!17;UBERON:0009196!3.54e-14!17;UBERON:0009117!3.54e-14!17;UBERON:0002323!4.76e-13!37;UBERON:0004458!4.76e-13!37;UBERON:0003886!1.93e-12!38;UBERON:0002553!7.25e-12!39;UBERON:0000473!2.42e-11!14;UBERON:0003101!1.60e-10!16;UBERON:0000079!1.60e-10!16;UBERON:0003135!3.00e-10!15;UBERON:0000464!2.22e-09!57;UBERON:0000926!1.54e-07!193;UBERON:0004120!1.54e-07!193;UBERON:0006603!1.54e-07!193;UBERON:0001008!2.17e-07!17;UBERON:0006554!6.87e-07!16;UBERON:0003103!7.34e-07!43;UBERON:0000474!7.45e-07!9 | |ontology_enrichment_uberon=UBERON:0005156!4.19e-17!26;UBERON:0000990!4.19e-17!26;UBERON:0003133!7.30e-16!24;UBERON:0000991!3.27e-15!18;UBERON:0005564!3.27e-15!18;UBERON:0004176!3.54e-14!17;UBERON:0009196!3.54e-14!17;UBERON:0009117!3.54e-14!17;UBERON:0002323!4.76e-13!37;UBERON:0004458!4.76e-13!37;UBERON:0003886!1.93e-12!38;UBERON:0002553!7.25e-12!39;UBERON:0000473!2.42e-11!14;UBERON:0003101!1.60e-10!16;UBERON:0000079!1.60e-10!16;UBERON:0003135!3.00e-10!15;UBERON:0000464!2.22e-09!57;UBERON:0000926!1.54e-07!193;UBERON:0004120!1.54e-07!193;UBERON:0006603!1.54e-07!193;UBERON:0001008!2.17e-07!17;UBERON:0006554!6.87e-07!16;UBERON:0003103!7.34e-07!43;UBERON:0000474!7.45e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000991,7.50e-35,18;UBERON:0005564,7.50e-35,18;UBERON:0005156,1.51e-33,26;UBERON:0000990,1.51e-33,26;UBERON:0003133,2.12e-32,24;UBERON:0004176,7.08e-32,17;UBERON:0009196,7.08e-32,17;UBERON:0009117,7.08e-32,17;UBERON:0000473,9.28e-24,14;UBERON:0003135,4.96e-22,15;UBERON:0003101,1.62e-20,16;UBERON:0000079,1.62e-20,16;UBERON:0002323,3.22e-20,37;UBERON:0004458,3.22e-20,37;UBERON:0003886,1.37e-19,38;UBERON:0002553,5.44e-19,39;UBERON:0000474,2.81e-11,9;UBERON:0000992,6.61e-10,3;UBERON:0002113,9.83e-10,14;UBERON:0003918,9.83e-10,14;UBERON:0011143,9.83e-10,14;UBERON:0005095,9.83e-10,14;UBERON:0007687,9.83e-10,14;UBERON:0003100,4.11e-09,11;UBERON:0003134,6.35e-09,8;UBERON:0000926,1.97e-07,120;UBERON:0004120,1.97e-07,120;UBERON:0006603,1.97e-07,120;UBERON:0006554,2.36e-07,18;UBERON:0001008,6.48e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85960031981627,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04091196059682,0.304465478312141,0.461230994512117,0.150722640552623,0.470354828542819,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85150218780886,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,5.9710280045548,0,0,0,0.621377317606506,0.469052119962192,1.44049649168812,0.473489471170421,0.590292695242212,0.617068451549513,0.465067889500816,0,0.467061369468678,0,0.164167464079095,0.324275238183423,0.292399974850665,0,0,0,0,0,0,0.639864751605702,0.464473343720877,0.515469845288373,0.605050573870028,0,0,0,0,0,0.198956472041151,0,0,0,0,1.89667900953082,2.51346727741403,4.50830942692322,4.88763186828754,1.93952487167626,2.59502533594179,0.189709611372772,0,0.156998727841375,0.246794327843601,0,1.00107063429656,0.196558995113203,0.224862112384854,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0.169745085775188,0.234690248288502,0.167506257441816,0.238043640886014,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0.117211686592203,0,0,0.315508219416257,0,1.29254038639679,0,0,0,0,0,0,0,1.41940085208269,3.5613120733451,6.8412522928502,3.29940245945071,0,0.728341908464944,0.604647113929502,0.188605079755898,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0.938686832254841,0,0.220528398054962,0,0,0,0,0,0,0,0,3.50857675537478,3.33350149265481,0.376736914009382,0,0,0,0,0,0,1.10717597753397,0.609958401380546,0.648032044930808,0.418176592028937,0.436725127492355,0.269728692769641,0,0,0,0,0.56369293868419,5.38259565758324,1.98550188548517,2.33341426012857,1.80823752868824,1.35164900392623,3.0512882047896,2.3436789271911,3.98465508817701,2.89900944991207,2.30424005006292,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0.19318959403219,1.31377732815827,1.09890974560359,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.798049746802062,0.170733605754134,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0,0.25347929989024,0.377252682772152,0.187283014939765,0.0640251524048693,0.114870937911227,0.952587382566147,0.115884325944855,0,0,0.441596760403192,0,0,0,0.145346416632329,0.470546902076653,0.25384382367503,0.182927972872773,0.263069711437843,0.407412341537585,0,0.118635018124174,0,0.818462086339379,0.309873682371932,0.192906610981141,0,0,0,0.382576664137687,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85960031981627,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04091196059682,0.304465478312141,0.461230994512117,0.150722640552623,0.470354828542819,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85150218780886,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,5.9710280045548,0,0,0,0.621377317606506,0.469052119962192,1.44049649168812,0.473489471170421,0.590292695242212,0.617068451549513,0.465067889500816,0,0.467061369468678,0,0.164167464079095,0.324275238183423,0.292399974850665,0,0,0,0,0,0,0.639864751605702,0.464473343720877,0.515469845288373,0.605050573870028,0,0,0,0,0,0.198956472041151,0,0,0,0,1.89667900953082,2.51346727741403,4.50830942692322,4.88763186828754,1.93952487167626,2.59502533594179,0.189709611372772,0,0.156998727841375,0.246794327843601,0,1.00107063429656,0.196558995113203,0.224862112384854,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0.169745085775188,0.234690248288502,0.167506257441816,0.238043640886014,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0.117211686592203,0,0,0.315508219416257,0,1.29254038639679,0,0,0,0,0,0,0,1.41940085208269,3.5613120733451,6.8412522928502,3.29940245945071,0,0.728341908464944,0.604647113929502,0.188605079755898,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0.938686832254841,0,0.220528398054962,0,0,0,0,0,0,0,0,3.50857675537478,3.33350149265481,0.376736914009382,0,0,0,0,0,0,1.10717597753397,0.609958401380546,0.648032044930808,0.418176592028937,0.436725127492355,0.269728692769641,0,0,0,0,0.56369293868419,5.38259565758324,1.98550188548517,2.33341426012857,1.80823752868824,1.35164900392623,3.0512882047896,2.3436789271911,3.98465508817701,2.89900944991207,2.30424005006292,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0.19318959403219,1.31377732815827,1.09890974560359,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.798049746802062,0.170733605754134,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0,0.25347929989024,0.377252682772152,0.187283014939765,0.0640251524048693,0.114870937911227,0.952587382566147,0.115884325944855,0,0,0.441596760403192,0,0,0,0.145346416632329,0.470546902076653,0.25384382367503,0.182927972872773,0.263069711437843,0.407412341537585,0,0.118635018124174,0,0.818462086339379,0.309873682371932,0.192906610981141,0,0,0,0.382576664137687,0,0 | ||
|short_description=p3@AI314831 | |short_description=p3@AI314831 | ||
}} | }} |
Latest revision as of 22:15, 1 October 2015
Short description: | p3@AI314831 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_AI314831_5end |
Coexpression cluster: | MCL_coexpression_mm9:743 |
Association with transcript: | -16bp_to_ENSMUST00000172701, NR_015462, uc008lkn.1_5end |
EntrezGene: | AI314831 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gonad | 7.50e-35 | 18 |
gonad primordium | 7.50e-35 | 18 |
reproductive structure | 1.51e-33 | 26 |
reproductive system | 1.51e-33 | 26 |
reproductive organ | 2.12e-32 | 24 |
external genitalia | 7.08e-32 | 17 |
indifferent external genitalia | 7.08e-32 | 17 |
indifferent gonad | 7.08e-32 | 17 |
testis | 9.28e-24 | 14 |
male reproductive organ | 4.96e-22 | 15 |
male organism | 1.62e-20 | 16 |
male reproductive system | 1.62e-20 | 16 |
body cavity | 3.22e-20 | 37 |
body cavity or lining | 3.22e-20 | 37 |
body cavity precursor | 1.37e-19 | 38 |
anatomical cavity | 5.44e-19 | 39 |
female reproductive system | 2.81e-11 | 9 |
female gonad | 6.61e-10 | 3 |
kidney | 9.83e-10 | 14 |
kidney mesenchyme | 9.83e-10 | 14 |
upper urinary tract | 9.83e-10 | 14 |
kidney rudiment | 9.83e-10 | 14 |
kidney field | 9.83e-10 | 14 |
female organism | 4.11e-09 | 11 |
female reproductive organ | 6.35e-09 | 8 |
mesoderm | 1.97e-07 | 120 |
mesoderm-derived structure | 1.97e-07 | 120 |
presumptive mesoderm | 1.97e-07 | 120 |
urinary system structure | 2.36e-07 | 18 |
renal system | 6.48e-07 | 19 |