FFCP PHASE1:Mm9::chr2:33764191..33764206,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3171 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:33764191..33764206,+ | |||
|description=CAGE_peak_at_chr2:33764191..33764206,+ | |description=CAGE_peak_at_chr2:33764191..33764206,+ | ||
|id=chr2:33764191..33764206,+ | |id=chr2:33764191..33764206,+ | ||
|ontology_enrichment_celltype=CL:0000084!4.17e-09!11;CL:0000827!4.17e-09!11;CL:0000838!3.40e-08!12;CL:0000542!1.99e-07!13;CL:0000051!1.99e-07!13;CL:0000791!8.35e-07!9;CL:0000789!8.35e-07!9;CL:0002420!8.35e-07!9;CL:0002419!8.35e-07!9;CL:0000790!8.35e-07!9 | |ontology_enrichment_celltype=CL:0000084!4.17e-09!11;CL:0000827!4.17e-09!11;CL:0000838!3.40e-08!12;CL:0000542!1.99e-07!13;CL:0000051!1.99e-07!13;CL:0000791!8.35e-07!9;CL:0000789!8.35e-07!9;CL:0002420!8.35e-07!9;CL:0002419!8.35e-07!9;CL:0000790!8.35e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.72e-22,9;CL:0000789,5.72e-22,9;CL:0002420,5.72e-22,9;CL:0002419,5.72e-22,9;CL:0000790,5.72e-22,9;CL:0000084,5.24e-18,11;CL:0000827,5.24e-18,11;CL:0000838,1.61e-16,12;CL:0000624,4.98e-16,8;CL:0000542,2.93e-15,13;CL:0000051,2.93e-15,13;CL:0000738,1.08e-11,17;CL:0002087,1.08e-11,17;CL:0000625,2.09e-09,1;CL:0000815,4.39e-09,1;CL:0000792,4.39e-09,1;CL:0000355,8.22e-09,9;CL:0002031,5.82e-08,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.71e-25,3;DOID:4045,3.71e-25,3;DOID:0050686,6.34e-13,6 | |||
|ontology_enrichment_uberon=UBERON:0002370!1.38e-09!23;UBERON:0000974!1.38e-09!23;UBERON:0004807!1.38e-09!23;UBERON:0005058!1.38e-09!23;UBERON:0003351!1.38e-09!23;UBERON:0009113!1.38e-09!23;UBERON:0003295!1.38e-09!23;UBERON:0009722!1.38e-09!23;UBERON:0005562!1.38e-09!23;UBERON:0007690!1.38e-09!23;UBERON:0006562!4.81e-09!24;UBERON:0003408!4.81e-09!24;UBERON:0001557!4.81e-09!24;UBERON:0001042!4.81e-09!24;UBERON:0008814!4.81e-09!24;UBERON:0009145!4.81e-09!24;UBERON:0000072!1.16e-07!27;UBERON:0004177!6.57e-07!29 | |ontology_enrichment_uberon=UBERON:0002370!1.38e-09!23;UBERON:0000974!1.38e-09!23;UBERON:0004807!1.38e-09!23;UBERON:0005058!1.38e-09!23;UBERON:0003351!1.38e-09!23;UBERON:0009113!1.38e-09!23;UBERON:0003295!1.38e-09!23;UBERON:0009722!1.38e-09!23;UBERON:0005562!1.38e-09!23;UBERON:0007690!1.38e-09!23;UBERON:0006562!4.81e-09!24;UBERON:0003408!4.81e-09!24;UBERON:0001557!4.81e-09!24;UBERON:0001042!4.81e-09!24;UBERON:0008814!4.81e-09!24;UBERON:0009145!4.81e-09!24;UBERON:0000072!1.16e-07!27;UBERON:0004177!6.57e-07!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,8.22e-09,9;UBERON:0002036,8.22e-09,9;UBERON:0002385,8.22e-09,9;UBERON:0000486,8.22e-09,9;UBERON:0007503,8.22e-09,9;UBERON:0001015,8.22e-09,9;UBERON:0002329,8.22e-09,9;UBERON:0003082,8.22e-09,9;UBERON:0003059,8.22e-09,9;UBERON:0007282,8.22e-09,9;UBERON:0004290,8.22e-09,9;UBERON:0009618,8.22e-09,9;UBERON:0000383,5.52e-08,10;UBERON:0007524,2.64e-07,11;UBERON:0003077,2.64e-07,11;UBERON:0007285,2.64e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,5.81054955487093,0.281577444303333,0,0,0,8.38883576662908,3.58423649917889,0,0,0,0.157731082679119,0,0.42438965179803,0.0850432901510698,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0447591376858,16.4080422349998,7.32933241563318,8.82347232046521,2.73218193983378,9.22469670759192,0,0,0,0,0,0,0,0,0,0,7.97898356212479,8.73843877770406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52091337055676,0,0,0,0,0.142371680799103,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0.469052119962192,0,0,0,0.154267112887378,0,0,0,0,0.32833492815819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0.276399947608848,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0.360586348559907,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0.292373642219257,0.192423683280659,0.584384510907845,0,0.221985953374065,0.179427713218951,0.167884616364078,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0.243106717068294,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,5.81054955487093,0.281577444303333,0,0,0,8.38883576662908,3.58423649917889,0,0,0,0.157731082679119,0,0.42438965179803,0.0850432901510698,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0447591376858,16.4080422349998,7.32933241563318,8.82347232046521,2.73218193983378,9.22469670759192,0,0,0,0,0,0,0,0,0,0,7.97898356212479,8.73843877770406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52091337055676,0,0,0,0,0.142371680799103,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0.469052119962192,0,0,0,0.154267112887378,0,0,0,0,0.32833492815819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0.276399947608848,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0.360586348559907,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0.292373642219257,0.192423683280659,0.584384510907845,0,0.221985953374065,0.179427713218951,0.167884616364078,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0.243106717068294,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p@chr2:33764191..33764206,+ | |short_description=p@chr2:33764191..33764206,+ | ||
}} | }} |
Latest revision as of 02:21, 5 August 2015
Short description: | p@chr2:33764191..33764206, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:33764191..33764206, + |
Coexpression cluster: | MCL_coexpression_mm9:3171 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.72e-22 | 9 |
alpha-beta T cell | 5.72e-22 | 9 |
immature T cell | 5.72e-22 | 9 |
mature T cell | 5.72e-22 | 9 |
immature alpha-beta T cell | 5.72e-22 | 9 |
T cell | 5.24e-18 | 11 |
pro-T cell | 5.24e-18 | 11 |
lymphoid lineage restricted progenitor cell | 1.61e-16 | 12 |
CD4-positive, alpha-beta T cell | 4.98e-16 | 8 |
lymphocyte | 2.93e-15 | 13 |
common lymphoid progenitor | 2.93e-15 | 13 |
leukocyte | 1.08e-11 | 17 |
nongranular leukocyte | 1.08e-11 | 17 |
CD8-positive, alpha-beta T cell | 2.09e-09 | 1 |
regulatory T cell | 4.39e-09 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 4.39e-09 | 1 |
multi-potent skeletal muscle stem cell | 8.22e-09 | 9 |
hematopoietic lineage restricted progenitor cell | 5.82e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 8.22e-09 | 9 |
striated muscle tissue | 8.22e-09 | 9 |
muscle tissue | 8.22e-09 | 9 |
multilaminar epithelium | 8.22e-09 | 9 |
epithelial vesicle | 8.22e-09 | 9 |
musculature | 8.22e-09 | 9 |
somite | 8.22e-09 | 9 |
myotome | 8.22e-09 | 9 |
presomitic mesoderm | 8.22e-09 | 9 |
presumptive segmental plate | 8.22e-09 | 9 |
dermomyotome | 8.22e-09 | 9 |
trunk paraxial mesoderm | 8.22e-09 | 9 |
musculature of body | 5.52e-08 | 10 |
dense mesenchyme tissue | 2.64e-07 | 11 |
paraxial mesoderm | 2.64e-07 | 11 |
presumptive paraxial mesoderm | 2.64e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.71e-25 | 3 |
muscle cancer | 3.71e-25 | 3 |
organ system cancer | 6.34e-13 | 6 |