FFCP PHASE1:Mm9::chr3:32848711..32848733,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=751 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:32848711..32848733,- | |||
|description=CAGE_peak_at_chr3:32848711..32848733,- | |description=CAGE_peak_at_chr3:32848711..32848733,- | ||
|id=chr3:32848711..32848733,- | |id=chr3:32848711..32848733,- | ||
|ontology_enrichment_celltype=CL:0000117!1.90e-12!23;CL:0000337!1.90e-12!23;CL:0002614!2.32e-08!3;CL:0000540!6.72e-08!33;CL:0000047!6.72e-08!33;CL:0000031!6.72e-08!33;CL:0000404!6.72e-08!33;CL:0000221!2.45e-07!44;CL:0000133!2.45e-07!44 | |ontology_enrichment_celltype=CL:0000117!1.90e-12!23;CL:0000337!1.90e-12!23;CL:0002614!2.32e-08!3;CL:0000540!6.72e-08!33;CL:0000047!6.72e-08!33;CL:0000031!6.72e-08!33;CL:0000404!6.72e-08!33;CL:0000221!2.45e-07!44;CL:0000133!2.45e-07!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,5.28e-16,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.32e-28!52;UBERON:0005068!5.32e-28!52;UBERON:0006241!5.32e-28!52;UBERON:0007135!5.32e-28!52;UBERON:0000073!1.25e-24!75;UBERON:0001016!1.25e-24!75;UBERON:0000033!5.60e-24!63;UBERON:0002346!7.88e-24!71;UBERON:0003075!7.88e-24!71;UBERON:0007284!7.88e-24!71;UBERON:0001017!9.46e-24!73;UBERON:0005743!9.46e-24!73;UBERON:0002616!1.16e-23!49;UBERON:0000955!4.51e-23!50;UBERON:0006238!4.51e-23!50;UBERON:0004121!8.75e-22!102;UBERON:0000924!8.75e-22!102;UBERON:0006601!8.75e-22!102;UBERON:0002020!4.02e-21!34;UBERON:0003056!1.43e-18!49;UBERON:0003080!1.18e-17!40;UBERON:0002780!3.46e-16!39;UBERON:0001890!3.46e-16!39;UBERON:0006240!3.46e-16!39;UBERON:0007811!7.94e-16!86;UBERON:0002791!1.22e-15!29;UBERON:0003528!1.22e-15!29;UBERON:0001893!1.22e-15!29;UBERON:0002298!7.27e-15!6;UBERON:0000153!6.29e-14!94;UBERON:0002021!9.15e-12!10;UBERON:0000411!9.15e-12!10;UBERON:0001950!9.15e-12!10;UBERON:0003076!2.39e-11!12;UBERON:0003057!2.39e-11!12;UBERON:0002950!2.45e-10!4;UBERON:0001891!2.45e-10!4;UBERON:0009616!2.45e-10!4;UBERON:0002420!4.07e-10!8;UBERON:0007245!4.07e-10!8;UBERON:0010009!4.07e-10!8;UBERON:0010011!4.07e-10!8;UBERON:0000454!4.07e-10!8;UBERON:0004111!4.25e-10!122;UBERON:0002240!2.01e-09!6;UBERON:0005174!2.01e-09!6;UBERON:0001137!2.01e-09!6;UBERON:0000025!2.36e-09!114;UBERON:0002038!2.32e-08!3;UBERON:0002308!2.32e-08!3;UBERON:0009663!2.32e-08!3;UBERON:0009661!2.32e-08!3;UBERON:0006331!2.32e-08!3;UBERON:0000125!2.32e-08!3;UBERON:0002619!3.17e-08!17;UBERON:0000956!4.58e-08!21;UBERON:0001869!4.58e-08!21;UBERON:0000203!4.58e-08!21;UBERON:0001948!2.86e-07!5;UBERON:0002315!2.86e-07!5 | |ontology_enrichment_uberon=UBERON:0001049!5.32e-28!52;UBERON:0005068!5.32e-28!52;UBERON:0006241!5.32e-28!52;UBERON:0007135!5.32e-28!52;UBERON:0000073!1.25e-24!75;UBERON:0001016!1.25e-24!75;UBERON:0000033!5.60e-24!63;UBERON:0002346!7.88e-24!71;UBERON:0003075!7.88e-24!71;UBERON:0007284!7.88e-24!71;UBERON:0001017!9.46e-24!73;UBERON:0005743!9.46e-24!73;UBERON:0002616!1.16e-23!49;UBERON:0000955!4.51e-23!50;UBERON:0006238!4.51e-23!50;UBERON:0004121!8.75e-22!102;UBERON:0000924!8.75e-22!102;UBERON:0006601!8.75e-22!102;UBERON:0002020!4.02e-21!34;UBERON:0003056!1.43e-18!49;UBERON:0003080!1.18e-17!40;UBERON:0002780!3.46e-16!39;UBERON:0001890!3.46e-16!39;UBERON:0006240!3.46e-16!39;UBERON:0007811!7.94e-16!86;UBERON:0002791!1.22e-15!29;UBERON:0003528!1.22e-15!29;UBERON:0001893!1.22e-15!29;UBERON:0002298!7.27e-15!6;UBERON:0000153!6.29e-14!94;UBERON:0002021!9.15e-12!10;UBERON:0000411!9.15e-12!10;UBERON:0001950!9.15e-12!10;UBERON:0003076!2.39e-11!12;UBERON:0003057!2.39e-11!12;UBERON:0002950!2.45e-10!4;UBERON:0001891!2.45e-10!4;UBERON:0009616!2.45e-10!4;UBERON:0002420!4.07e-10!8;UBERON:0007245!4.07e-10!8;UBERON:0010009!4.07e-10!8;UBERON:0010011!4.07e-10!8;UBERON:0000454!4.07e-10!8;UBERON:0004111!4.25e-10!122;UBERON:0002240!2.01e-09!6;UBERON:0005174!2.01e-09!6;UBERON:0001137!2.01e-09!6;UBERON:0000025!2.36e-09!114;UBERON:0002038!2.32e-08!3;UBERON:0002308!2.32e-08!3;UBERON:0009663!2.32e-08!3;UBERON:0009661!2.32e-08!3;UBERON:0006331!2.32e-08!3;UBERON:0000125!2.32e-08!3;UBERON:0002619!3.17e-08!17;UBERON:0000956!4.58e-08!21;UBERON:0001869!4.58e-08!21;UBERON:0000203!4.58e-08!21;UBERON:0001948!2.86e-07!5;UBERON:0002315!2.86e-07!5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,5.28e-16,3;UBERON:0002275,5.28e-16,3;UBERON:0001851,4.30e-12,1;UBERON:0005889,4.30e-12,1;UBERON:0000073,2.00e-07,54;UBERON:0001017,2.46e-07,73;UBERON:0001016,3.90e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,2.93680877595932,2.91852413186863,0.131886287730194,0.0914876436024097,0,0.837548997004143,0.56276261003168,1.37518422999129,0.294628585473668,0.142371680799103,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.449371918214468,0.457500602818626,0,0.521472960576829,1.27857728665165,0.83115217823824,0.648965052271031,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,0.703270119553219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0.920650473014354,0.572895513439397,0.68741272937475,0,1.5107877947794,0,1.35096360967266,0.906284817968409,0.51776031175182,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,2.93680877595932,2.91852413186863,0.131886287730194,0.0914876436024097,0,0.837548997004143,0.56276261003168,1.37518422999129,0.294628585473668,0.142371680799103,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.449371918214468,0.457500602818626,0,0.521472960576829,1.27857728665165,0.83115217823824,0.648965052271031,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,0.703270119553219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0.920650473014354,0.572895513439397,0.68741272937475,0,1.5107877947794,0,1.35096360967266,0.906284817968409,0.51776031175182,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:32848711..32848733,- | |short_description=p@chr3:32848711..32848733,- | ||
}} | }} |
Latest revision as of 09:28, 6 August 2015
Short description: | p@chr3:32848711..32848733, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:32848711..32848733, - |
Coexpression cluster: | MCL_coexpression_mm9:751 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 5.28e-16 | 3 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 5.28e-16 | 3 |
reticular formation | 5.28e-16 | 3 |
cortex | 4.30e-12 | 1 |
zygote cortex | 4.30e-12 | 1 |
regional part of nervous system | 2.00e-07 | 54 |
central nervous system | 2.46e-07 | 73 |
nervous system | 3.90e-07 | 75 |