FFCP PHASE1:Hg19::chr13:34392200..34392221,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5983 | |EntrezGene=5983 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9971 | |HGNC=9971 | ||
|TSSclassifier=strong | |||
|UniProt=C9JU95,P40938 | |UniProt=C9JU95,P40938 | ||
|association_with_transcript=0bp_to_ENST00000434425,NM_002915,NM_181558,uc001uuz.2,uc001uva.2,uc010ted.1_5end | |association_with_transcript=0bp_to_ENST00000434425,NM_002915,NM_181558,uc001uuz.2,uc001uva.2,uc010ted.1_5end | ||
|cluster_id=chr13:34392200..34392221,+ | |||
|description=CAGE_peak_3_at_RFC3_5end | |description=CAGE_peak_3_at_RFC3_5end | ||
|id=chr13:34392200..34392221,+ | |id=chr13:34392200..34392221,+ | ||
|ontology_enrichment_celltype=CL:0000542!8.98e-11!53;CL:0000051!8.98e-11!53;CL:0000838!2.86e-10!52;CL:0000945!2.91e-07!24;CL:0000826!2.91e-07!24 | |ontology_enrichment_celltype=CL:0000542!8.98e-11!53;CL:0000051!8.98e-11!53;CL:0000838!2.86e-10!52;CL:0000945!2.91e-07!24;CL:0000826!2.91e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000945;7.67e-08;24!CL:0002321;1.29e-07;15!CL:0000542;3.01e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,4.81e-10,53;CL:0000051,4.81e-10,53;CL:0000838,1.64e-09,52;CL:0000945,1.27e-07,24;CL:0000826,1.27e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000051;3.01e-07;53 | |||
|ontology_enrichment_disease=DOID:162!1.97e-15!235;DOID:2531!3.98e-14!51;DOID:0060083!3.98e-14!51;DOID:14566!4.55e-14!239;DOID:1240!9.08e-10!39;DOID:0050686!5.25e-08!137;DOID:0050687!1.07e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:2531;2.59e-10;51!DOID:0060083;2.59e-10;51!DOID:1240;8.62e-10;39!DOID:8692;2.03e-07;31!DOID:3095;5.90e-07;22!DOID:2994;5.90e-07;22!DOID:0060058;6.12e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.86e-15,51;DOID:0060083,2.86e-15,51;DOID:162,1.72e-13,235;DOID:14566,3.01e-12,239;DOID:1240,1.06e-10,39;DOID:0060058,3.72e-07,10;DOID:3095,4.43e-07,22;DOID:2994,4.43e-07,22;DOID:0050686,4.46e-07,137;DOID:8692,5.74e-07,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001557,2.23e-07,19 | |||
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| ||
|short_description=p3@RFC3 | |short_description=p3@RFC3 | ||
}} | }} |
Latest revision as of 04:51, 17 September 2015
Short description: | p3@RFC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RFC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000434425, NM_002915, NM_181558, uc001uuz.2, uc001uva.2, uc010ted.1_5end |
EntrezGene: | RFC3 |
HGNC: | 9971 |
UniProt: | C9JU95P40938 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.81e-10 | 53 |
common lymphoid progenitor | 4.81e-10 | 53 |
lymphoid lineage restricted progenitor cell | 1.64e-09 | 52 |
lymphocyte of B lineage | 1.27e-07 | 24 |
pro-B cell | 1.27e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
upper respiratory tract | 2.23e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.86e-15 | 51 |
immune system cancer | 2.86e-15 | 51 |
cancer | 1.72e-13 | 235 |
disease of cellular proliferation | 3.01e-12 | 239 |
leukemia | 1.06e-10 | 39 |
lymphoma | 3.72e-07 | 10 |
germ cell and embryonal cancer | 4.43e-07 | 22 |
germ cell cancer | 4.43e-07 | 22 |
organ system cancer | 4.46e-07 | 137 |
myeloid leukemia | 5.74e-07 | 31 |