FFCP PHASE1:Hg19::chr13:46542074..46542106,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23091 | |EntrezGene=23091 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=20368 | |HGNC=20368 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=56bp_to_uc001vaq.2_5end | |association_with_transcript=56bp_to_uc001vaq.2_5end | ||
|cluster_id=chr13:46542074..46542106,- | |||
|description=CAGE_peak_6_at_ZC3H13_5end | |description=CAGE_peak_6_at_ZC3H13_5end | ||
|id=chr13:46542074..46542106,- | |id=chr13:46542074..46542106,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.38e-07!239;DOID:162!3.56e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.20e-12!57;UBERON:0005068!1.20e-12!57;UBERON:0006241!1.20e-12!57;UBERON:0007135!1.20e-12!57;UBERON:0002780!1.81e-12!41;UBERON:0001890!1.81e-12!41;UBERON:0006240!1.81e-12!41;UBERON:0003080!1.08e-11!42;UBERON:0001017!1.61e-11!82;UBERON:0002020!3.02e-11!34;UBERON:0003528!3.02e-11!34;UBERON:0005743!2.34e-10!86;UBERON:0000955!3.36e-10!69;UBERON:0006238!3.36e-10!69;UBERON:0000073!4.71e-10!94;UBERON:0001016!4.71e-10!94;UBERON:0002791!7.02e-10!33;UBERON:0002616!8.58e-10!59;UBERON:0001893!1.03e-09!34;UBERON:0001869!2.12e-09!32;UBERON:0002346!2.74e-09!90;UBERON:0007023!2.23e-08!115;UBERON:0003075!7.29e-08!86;UBERON:0007284!7.29e-08!86;UBERON:0002619!2.64e-07!22;UBERON:0000956!3.51e-07!25;UBERON:0000203!3.51e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.09e-11;34!UBERON:0002020;1.09e-11;34!UBERON:0002791;2.38e-11;32!UBERON:0002780;5.74e-11;41!UBERON:0001890;5.74e-11;41!UBERON:0002619;4.71e-10;22!UBERON:0001869;4.84e-10;32!UBERON:0001893;1.40e-09;34!UBERON:0000073;5.09e-09;53!UBERON:0002616;5.09e-09;53!UBERON:0000956;1.93e-08;25!UBERON:0000203;1.93e-08;25!UBERON:0000125;2.24e-08;9!UBERON:0002308;2.24e-08;9!UBERON:0001950;4.09e-08;20!UBERON:0002050;1.21e-07;5!UBERON:0005423;1.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.89e-16,56;UBERON:0005068,1.89e-16,56;UBERON:0006241,1.89e-16,56;UBERON:0007135,1.89e-16,56;UBERON:0000073,3.87e-15,53;UBERON:0002616,3.87e-15,53;UBERON:0002780,4.29e-15,41;UBERON:0001890,4.29e-15,41;UBERON:0003080,4.29e-15,41;UBERON:0006240,4.29e-15,41;UBERON:0003528,1.24e-14,34;UBERON:0002020,1.24e-14,34;UBERON:0002346,1.28e-14,86;UBERON:0001017,1.07e-12,81;UBERON:0002791,1.56e-12,32;UBERON:0000955,1.80e-12,68;UBERON:0006238,1.80e-12,68;UBERON:0001016,2.76e-12,89;UBERON:0003075,8.98e-12,82;UBERON:0007284,8.98e-12,82;UBERON:0001893,1.75e-11,34;UBERON:0001869,5.75e-11,32;UBERON:0003056,1.54e-10,61;UBERON:0010371,4.01e-10,104;UBERON:0002619,5.19e-10,22;UBERON:0004121,3.01e-09,171;UBERON:0000924,3.01e-09,171;UBERON:0006601,3.01e-09,171;UBERON:0000125,1.21e-08,9;UBERON:0002308,1.21e-08,9;UBERON:0000956,2.09e-08,25;UBERON:0000203,2.09e-08,25;UBERON:0001950,5.94e-08,20 | |||
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|phase1_expression=0,0.642301571672949,0.422863212287913,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0.123766352960047,0,0,1.20538905604795,0,1.46379839637152,0,0,0,0.85870796139317,0.136874425072884,0.502170558379211,0.687720651731561,1.23150884174919,0.314843125254717,0,0,0,0,0,0,0.542270404062111,1.56386155736164,0,0,0.200544447470142,0,0.223915474239924,0.32389366601898,0,0.872389432677388,1.13362783106643,0.485168122375632,1.39457422143411,0.822335776043652,0.929119112685311,1.43846196161075,0.768482119587302,0.236482229888585,0.344745680736619,0.645484683583826,0,1.31769637679823,1.36453075028923,0.674170453335254,0.918251677112708,0.320929027076094,0.639337125799041,0.329851300186716,0.797854630486527,0.426224750532694,2.03146467040009,2.26954089876456,0.622822248995575,2.26123798731069,2.08593167368081,0.434377689410233,1.21079900526674,0.736555271975129,0,0,0.212604299965044,0,0.44931452458598,0.300353785683013,0.64290234678832,0,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,1.17903228824749,0.822405995998037,0.334372990781356,0,0,1.94826728407911,0.222820913770347,0,0,0,0.384273959177026,0.650296737799391,0.822189523018381,0,0,0.14828656316206,0,1.04535523804977,0.113309342697566,0.383220493601921,0.34362744548263,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0.267440195783507,0.579297615531196,4.87613732627923,0,0,0,0.50133791063589,0.434539556882471,0,0.486634870302636,0,0,0.175669571386252,0.130979075497713,0,0,0,0,0.398873881556595,0.238490624305342,0,0,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.337834441449967,0,0,0,3.9534125230819,0,0,0,0.12663051166458,0.397227542439656,1.14734648299525,2.83734705758686,0,0,0.49333509683432,0.622422070799533,0.269421344139376,0.326923806226917,0,0,0,0,0,0.597794722207204,0,0,0,0.408308342509787,0.61417158655884,0,0,0.247266929278557,0,0,0.336672227908132,0.125118519871964,0,0,0,0.300476117813194,0,2.51145489964407,0.640672166455702,0.635795703478686,1.50045548042201,0.206105058476878,0.772921620136887,0.18611685633159,1.35021065793013,0,2.52433774244115,0.460249493211497,0.161646056818812,1.42003837006646,0.503760491138201,0.339121184620975,0,0,0,0.731842236777572,0.530119073285941,0.929551542956147,0.932949495138334,1.00928340350251,0.36497735907583,0,0,0,0.928735856063958,0,0.354920400119532,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,1.26755034821831,0,10.6342183202653,0.441463099414651,0.122988438543114,0.514703430895577,0.439001141634502,0,1.10581869652794,0.185176890317059,0.325808305310325,0,1.44331342025273,0.231860809950154,0,0,0,0.761016608938393,0,0,0,0,0.148631162288728,0,0.503946384596579,0,0.895585227028483,0,0,0.492663237895943,0.352193736052904,0.207328115540772,0,0.25248486685276,0.444485260045183,0.381988425558278,0,0,1.23392991243988,2.10240140490742,0.285826432630578,0,0,0.22001485746285,0.129271715757778,0,0.845302752556,0,0,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0.301439377059586,0,0.899756920638513,0,0.502257091432126,0,0,0,0,0.434343920002738,1.02738161275192,0.179060963239896,0.896681151948218,0,1.07813787429759,0.385029108839245,0.508189248444927,0,2.31986643833309,0.167516265334349,0.637938751653163,0,2.99161459204025,0,0.36807447515742,0.500170521059677,1.08506009479894,0.623912584592421,0.535286966391485,1.10391690523754,0.702848489956279,0,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0.431428401637234,0.213455115606889,0,0,0.30239029332968,0.496215615637554,0.61384789315225,0.280660094433074,0.128139149255701,0,0.64341568457443,0,1.07946785661859,0,0.492762936082855,0.519254429183621,0.232420756919918,0.966875596732978,0.200506470303285,2.11786274552562,0.34444334449382,1.0925470080403,0.393373244878272,0,0.0770153371044148,0,0,0.633309773357254,0,0,1.51141141271498,0,0,0,0,0,0,0.657779629937804,0,0,0,0.325378394664303,0.412164046590889,0.824125183365091,0.082509499920588,0,0.650060246036521,0,0,0.308097234229289,0,0.551346289938122,0.107420244868274,0.580066775656914,0.596586391912706,0.890320356467374,0.165284915360978,0.192190067365106,0.382838137483752,1.0115778085555,0,1.25924938732256,0,0,0,0,0,0.143124886741991,0.744316738719335,0.316379424718726,0,0,1.71175595213568,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,1.21856744815642,0,0.136499911407986,0.848432591722276,0,0,0,0,0,0.655894752046633,0.202910376962704,0,0,0.286822704408103,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0,0,0,0.540031437238115,0,0.427296284509893,0,0.735120647943095,1.48642540100575,0.721346064882224,0.355709216742071,1.59426272728822,0.997896857164083,0.191505370132367,0.846694330895531,0.649243880549111,2.24637742490767,0.456469358066384,1.88015874927628,0,0.677167111206413,0.642352300414798,1.21079824314629,0,3.43505344755765,0.307240764308458,0.223676107892416,0,1.56310476321632,0.278406173895242,0,0,0,0,0.18714054040822,0.586032717087576,0.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| ||
|short_description=p6@ZC3H13 | |short_description=p6@ZC3H13 | ||
}} | }} |
Latest revision as of 12:35, 17 September 2015
Short description: | p6@ZC3H13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ZC3H13_5end |
Coexpression cluster: | NA |
Association with transcript: | 56bp_to_uc001vaq.2_5end |
EntrezGene: | ZC3H13 |
HGNC: | 20368 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.89e-16 | 56 |
neural rod | 1.89e-16 | 56 |
future spinal cord | 1.89e-16 | 56 |
neural keel | 1.89e-16 | 56 |
regional part of nervous system | 3.87e-15 | 53 |
regional part of brain | 3.87e-15 | 53 |
regional part of forebrain | 4.29e-15 | 41 |
forebrain | 4.29e-15 | 41 |
anterior neural tube | 4.29e-15 | 41 |
future forebrain | 4.29e-15 | 41 |
brain grey matter | 1.24e-14 | 34 |
gray matter | 1.24e-14 | 34 |
neurectoderm | 1.28e-14 | 86 |
central nervous system | 1.07e-12 | 81 |
regional part of telencephalon | 1.56e-12 | 32 |
brain | 1.80e-12 | 68 |
future brain | 1.80e-12 | 68 |
nervous system | 2.76e-12 | 89 |
neural plate | 8.98e-12 | 82 |
presumptive neural plate | 8.98e-12 | 82 |
telencephalon | 1.75e-11 | 34 |
cerebral hemisphere | 5.75e-11 | 32 |
pre-chordal neural plate | 1.54e-10 | 61 |
ecto-epithelium | 4.01e-10 | 104 |
regional part of cerebral cortex | 5.19e-10 | 22 |
ectoderm-derived structure | 3.01e-09 | 171 |
ectoderm | 3.01e-09 | 171 |
presumptive ectoderm | 3.01e-09 | 171 |
neural nucleus | 1.21e-08 | 9 |
nucleus of brain | 1.21e-08 | 9 |
cerebral cortex | 2.09e-08 | 25 |
pallium | 2.09e-08 | 25 |
neocortex | 5.94e-08 | 20 |