FFCP PHASE1:Hg19::chr10:129858236..129858250,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:129858236..129858250,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_at_chr10:129858236..129858250,+ | |description=CAGE_peak_at_chr10:129858236..129858250,+ | ||
|id=chr10:129858236..129858250,+ | |id=chr10:129858236..129858250,+ | ||
|ontology_enrichment_celltype=CL:0000766!2.96e-35!76;CL:0000738!3.98e-33!140;CL:0000037!1.35e-31!172;CL:0000566!1.35e-31!172;CL:0002057!5.48e-31!42;CL:0002194!2.57e-29!63;CL:0000576!2.57e-29!63;CL:0000040!2.57e-29!63;CL:0000559!2.57e-29!63;CL:0002009!4.67e-29!65;CL:0002032!5.11e-29!165;CL:0000837!5.11e-29!165;CL:0002087!1.21e-28!119;CL:0000763!4.74e-28!112;CL:0000049!4.74e-28!112;CL:0000988!6.03e-28!182;CL:0000557!9.79e-28!71;CL:0000860!1.60e-27!45;CL:0000839!3.72e-27!70;CL:0002031!2.26e-25!124;CL:0000094!3.09e-08!8;CL:0002393!5.61e-08!9;CL:0002397!5.61e-08!9 | |ontology_enrichment_celltype=CL:0000766!2.96e-35!76;CL:0000738!3.98e-33!140;CL:0000037!1.35e-31!172;CL:0000566!1.35e-31!172;CL:0002057!5.48e-31!42;CL:0002194!2.57e-29!63;CL:0000576!2.57e-29!63;CL:0000040!2.57e-29!63;CL:0000559!2.57e-29!63;CL:0002009!4.67e-29!65;CL:0002032!5.11e-29!165;CL:0000837!5.11e-29!165;CL:0002087!1.21e-28!119;CL:0000763!4.74e-28!112;CL:0000049!4.74e-28!112;CL:0000988!6.03e-28!182;CL:0000557!9.79e-28!71;CL:0000860!1.60e-27!45;CL:0000839!3.72e-27!70;CL:0002031!2.26e-25!124;CL:0000094!3.09e-08!8;CL:0002393!5.61e-08!9;CL:0002397!5.61e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.52e-31;33!CL:0002057;5.52e-31;33!CL:0000473;1.12e-27;39!CL:0000234;1.12e-27;39!CL:0000576;3.20e-25;48!CL:0000766;4.58e-24;69!CL:0000094;3.13e-17;8!CL:0002393;7.01e-13;6!CL:0002397;7.01e-13;6!CL:0000081;4.95e-12;11!CL:0000763;6.06e-12;100!CL:0002087;2.42e-09;104!CL:0000738;4.23e-09;136!CL:0000775;5.25e-08;3!CL:0000623;1.51e-07;3!CL:0000226;3.80e-07;3!CL:0000842;3.80e-07;3!CL:0000767;7.42e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.42e-54,72;CL:0000473,9.77e-48,48;CL:0000234,9.77e-48,48;CL:0000860,1.03e-46,42;CL:0002057,1.03e-46,42;CL:0002009,2.62e-43,61;CL:0002194,5.98e-43,59;CL:0000576,5.98e-43,59;CL:0000040,5.98e-43,59;CL:0000559,5.98e-43,59;CL:0000738,3.69e-41,136;CL:0000557,2.58e-40,67;CL:0000763,1.73e-39,108;CL:0000049,1.73e-39,108;CL:0000839,4.30e-39,66;CL:0000037,3.39e-35,168;CL:0002087,3.48e-33,115;CL:0002032,5.37e-33,161;CL:0000837,5.37e-33,161;CL:0000988,1.80e-32,177;CL:0002031,3.95e-29,120;CL:0000094,4.31e-17,8;CL:0002393,7.89e-14,9;CL:0002397,7.89e-14,9;CL:0000081,6.19e-12,11;CL:0000134,3.34e-08,354;CL:0000775,5.29e-08,3;CL:0002320,9.59e-08,361;CL:0000623,1.49e-07,3;CL:0000825,1.49e-07,3;CL:0000226,3.52e-07,3;CL:0000842,3.52e-07,3;CL:0000767,9.86e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.83e-36;42!CL:0000049;1.43e-13;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.31e-29!102;UBERON:0003061!5.31e-29!102;UBERON:0002193!1.93e-28!112;UBERON:0002371!2.37e-23!80;UBERON:0007023!7.89e-22!115;UBERON:0001474!5.64e-20!86;UBERON:0002405!1.63e-19!115;UBERON:0004765!4.07e-16!101;UBERON:0001434!4.07e-16!101;UBERON:0001049!1.88e-10!57;UBERON:0005068!1.88e-10!57;UBERON:0006241!1.88e-10!57;UBERON:0007135!1.88e-10!57;UBERON:0002780!6.89e-10!41;UBERON:0001890!6.89e-10!41;UBERON:0006240!6.89e-10!41;UBERON:0003080!2.11e-09!42;UBERON:0002020!2.20e-09!34;UBERON:0003528!2.20e-09!34;UBERON:0002791!6.29e-09!33;UBERON:0001893!2.06e-08!34;UBERON:0002616!4.76e-08!59;UBERON:0000955!1.11e-07!69;UBERON:0006238!1.11e-07!69;UBERON:0001869!1.23e-07!32;UBERON:0002619!1.41e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.90e-07;15!UBERON:0000179;3.90e-07;15!UBERON:0000463;3.90e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.23e-36,98;UBERON:0003061,1.23e-36,98;UBERON:0002193,4.72e-35,108;UBERON:0002371,4.28e-34,76;UBERON:0001474,1.04e-30,82;UBERON:0002405,1.20e-28,93;UBERON:0004765,6.63e-27,90;UBERON:0001434,2.29e-24,100;UBERON:0003081,2.39e-11,203;UBERON:0002204,5.41e-10,167;UBERON:0002384,1.45e-07,371;UBERON:0000178,3.70e-07,15;UBERON:0000179,3.70e-07,15;UBERON:0000463,3.70e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0.164201178899891,0.0787107813136792,3.14691421479123,2.30297638858328,2.01260960310899,0,0,0,0.309868802321207,0,0.293600439334847,12.1878989877013,16.4446446925516,11.718587018656,0.447830948479849,0,0.257575567634187,4.21654892460738,2.64513160582167,0.970336244751265,7.67015821788759,4.52284676824008,4.02618282163635,8.05538698502021,4.61089271752381,0.945928919554341,3.10271112662957,2.5819387343353,2.70852973188684,7.52969358170419,2.45615535052061,0.449446968890169,4.89734227793444,0.320929027076094,0.639337125799041,2.30895910130701,3.39088217956774,0.852449501065388,9.86711411337186,2.26954089876456,0.622822248995575,19.8486445552827,10.429658368404,1.52032191293582,6.65939452896706,1.47311054395026,0.632924774881769,2.11255286311942,2.97646019951061,2.93522103711726,3.48218756554135,5.25619124945272,16.3940098431022,1.14005097496499,0.59675003159727,1.64397738388171,0,0.546138611262131,0,0.853460445133014,0,0.574752439954483,0,0,0,0,1.52909291250092,0,0,0.790152254325231,1.180258620683,0.393010762749165,2.2616164889946,0.167186495390678,0,1.4203434172042,0,0,0.294605907474837,0.443067789167242,1.35401931882508,0.896639238079726,0.780356085359269,0.493313713811028,1.10540007114339,0,0.444859689486181,0.267540828089713,1.04535523804977,0,0,0,0.253019692019503,0.318565414324097,0,0,0,0.255973222308837,0,0.236777252044017,0,4.03213486449465,5.34880391567015,2.60683926989038,0,0,0,0,0,0.144846518960824,0,0,0.283604451492204,0,0.087834785693126,0.392937226493138,0,0,0.649094787309367,1.74129737299267,2.39324328933957,3.10037811596945,0.571994910780128,0.371457501329565,0,0,0.694281003215189,0,0,0.275118041940067,0,0,0,1.33888245105868,0,0,0.976248230192678,0.735326160691737,0.81014194788176,0.0892997282840798,0,0.337834441449967,0,0,0.183201743930407,9.22462922052443,15.511210565933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0,0,0.122988438543114,0,0.109750285408626,0,0.301586917234893,0.277765335475589,0,0,0,0.115930404975077,0,0.144366447761074,0.925971025153221,1.71228737011138,0,0,0,0.234004265139238,0.743155811443641,0,0.335964256397719,0.141775097242386,0.806026704325635,0,0,0,0,0.621984346622316,0.144119953416961,1.00993946741104,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0.099972991182057,1.2162378064119,2.00902836572851,10.5416969741516,0,0,0,0,0,0,0.336255431980582,7.09310736726938,7.76259269494262,8.72732646702289,0,0,0,0,0,81.6417656102429,74.7903648010062,21.5496066986738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.47748907103838,3.66714141391649,2.45473382947922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.184161977871793,0,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,2.04180339991335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0.282431402330337,0,0,0,0,0.507447609232169,2.29391162142713,0.569647187174163,0.714695326373367,1.23408681925858,1.29694662238543,2.70015718619057,1.58625035258854,0,0,0,0.371606350251437,0.144269212976445,0.213425530045242,0.159426272728822,0.399158742865633,0,0.846694330895531,1.29848776109822,0.842391534340376,0.228234679033192,0.783399478865116,12.5317238545034,0,0.1605880751037,0.201799707191048,0.425846237690326,1.37402137902306,0.307240764308458,0.223676107892416,0.333698283423817,0.19538809540204,0.278406173895242,0,0,0,0,0,1.31857361344705,0,0.222886768554957,0,0,0,0,1.9882952955326,1.68803299692615,0.111308705022906,0,0.211125408127993,0.597743964753209,0.276283915531148,0,0,0.123084805461069,0,0.0898683511473268,0,1.02314474045374,0.591860433821602,0,0,1.93866549219044,0.649376687132959,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,1.52581736317083,0.442317039724898,0,0.438770794307945,0,0.139423744278603,0.384751292518985,0.341826167541004,0,0.179515288819544,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0.123563938946503,0,0.67401132980677,0,0,0.364909578431332,0,0,0,0,0,0.568679216656392,0,0.103688191397247,0,0,0,0,0,0,0,0.195984794828755,0.435296032902013,0.17472666824203,0.687944129886466,0,0,0,0.387956065953678,0,0,0,0,0.379864775735272,0,0.0801588202515337,0.426905989478705,0.19980960958213,0,0,0,0,0,0.471388069233591,0.135904206073614,0.104602846312333,0,0,2.40168115483916,0.821432273351958,0,0,0.262887354279314,0,0.458320848023367,1.43574604915363,0.199679000498991,0.858452096273142,0,0.134366944973453,0,0,0,0,0,0.0984274815147488,0,1.59045937961861,0.953423842781029,0,0,0,1.1248694577575,0,0.485996453264197,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.775697738169303,0.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| ||
|short_description=p@chr10:129858236..129858250,+ | |short_description=p@chr10:129858236..129858250,+ | ||
}} | }} |
Latest revision as of 11:38, 23 July 2015
Short description: | p@chr10:129858236..129858250, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:129858236..129858250, + |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.23e-36 | 98 |
blood island | 1.23e-36 | 98 |
hemolymphoid system | 4.72e-35 | 108 |
bone marrow | 4.28e-34 | 76 |
bone element | 1.04e-30 | 82 |
immune system | 1.20e-28 | 93 |
skeletal element | 6.63e-27 | 90 |
skeletal system | 2.29e-24 | 100 |
lateral plate mesoderm | 2.39e-11 | 203 |
musculoskeletal system | 5.41e-10 | 167 |
connective tissue | 1.45e-07 | 371 |
blood | 3.70e-07 | 15 |
haemolymphatic fluid | 3.70e-07 | 15 |
organism substance | 3.70e-07 | 15 |