FFCP PHASE1:Hg19::chr10:14457224..14457226,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:14457224..14457226,+ | |||
|description=CAGE_peak_at_chr10:14457224..14457226,+ | |description=CAGE_peak_at_chr10:14457224..14457226,+ | ||
|id=chr10:14457224..14457226,+ | |id=chr10:14457224..14457226,+ | ||
|ontology_enrichment_celltype=CL:0000515!2.62e-18!4;CL:0000680!3.55e-10!57;CL:0000056!3.55e-10!57;CL:0000355!3.55e-10!57;CL:0000359!8.51e-09!32;CL:0002595!1.32e-07!5;CL:0000055!3.12e-07!180 | |ontology_enrichment_celltype=CL:0000515!2.62e-18!4;CL:0000680!3.55e-10!57;CL:0000056!3.55e-10!57;CL:0000355!3.55e-10!57;CL:0000359!8.51e-09!32;CL:0002595!1.32e-07!5;CL:0000055!3.12e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0002593;3.61e-34;2!CL:0002590;3.66e-23;3!CL:1000306;9.45e-18;4!CL:0002547;9.45e-18;4!CL:0002595;1.40e-14;5!CL:0000359;6.09e-10;32!CL:0000192;2.48e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,3.61e-34,2;CL:0002590,4.09e-23,3;CL:1000306,8.69e-18,4;CL:0002547,8.69e-18,4;CL:0002595,1.40e-14,5;CL:0000359,2.22e-09,32;CL:0000192,2.95e-07,43;CL:0000514,2.95e-07,43 | |||
|ontology_enrichment_development_v019=CL:0000514;2.48e-07;43 | |||
|ontology_enrichment_disease=DOID:2513!1.21e-09!1 | |ontology_enrichment_disease=DOID:2513!1.21e-09!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!6.19e-10!83;UBERON:0002329!6.19e-10!83;UBERON:0003077!6.19e-10!83;UBERON:0003059!6.19e-10!83;UBERON:0007282!6.19e-10!83;UBERON:0009618!6.19e-10!83;UBERON:0007285!6.19e-10!83;UBERON:0001134!2.02e-09!61;UBERON:0002036!2.02e-09!61;UBERON:0003082!2.02e-09!61;UBERON:0002385!4.44e-09!63;UBERON:0001015!4.44e-09!63;UBERON:0000383!4.44e-09!63;UBERON:0001282!4.87e-09!1;UBERON:0009842!4.87e-09!1;UBERON:0003704!4.87e-09!1;UBERON:0001171!4.87e-09!1;UBERON:0001172!4.87e-09!1;UBERON:0002119!6.22e-09!4;UBERON:0004531!6.22e-09!4;UBERON:0000486!3.17e-08!82;UBERON:0004290!4.89e-08!70;UBERON:0003834!1.32e-07!5;UBERON:0001533!1.32e-07!5;UBERON:0005256!3.59e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;3.61e-34;2!UBERON:0004797;9.45e-18;4!UBERON:0000415;9.45e-18;4!UBERON:0007240;9.45e-18;4!UBERON:0005742;9.45e-18;4!UBERON:0005734;9.45e-18;4!UBERON:0004664;9.45e-18;4!UBERON:0004663;9.45e-18;4!UBERON:0003834;1.40e-14;5!UBERON:0001533;1.40e-14;5!UBERON:0005284;1.71e-14;5!UBERON:0003513;8.16e-11;7!UBERON:0004573;5.52e-08;33!UBERON:0004571;5.52e-08;33!UBERON:0006876;2.55e-07;11!UBERON:0001637;4.40e-07;42!UBERON:0003509;4.40e-07;42!UBERON:0004572;4.40e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,3.61e-34,2;UBERON:0000415,8.69e-18,4;UBERON:0007240,8.69e-18,4;UBERON:0005742,8.69e-18,4;UBERON:0005734,8.69e-18,4;UBERON:0004664,8.69e-18,4;UBERON:0004663,8.69e-18,4;UBERON:0003834,1.40e-14,5;UBERON:0001533,1.40e-14,5;UBERON:0005284,1.83e-14,5;UBERON:0003513,8.16e-11,7;UBERON:0004797,8.99e-11,7;UBERON:0004573,3.79e-09,33;UBERON:0004571,3.79e-09,33;UBERON:0002049,1.14e-08,78;UBERON:0007798,1.14e-08,78;UBERON:0001637,2.04e-07,42;UBERON:0003509,2.04e-07,42;UBERON:0004572,2.04e-07,42;UBERON:0006876,2.63e-07,11 | |||
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|short_description=p@chr10:14457224..14457226,+ | |short_description=p@chr10:14457224..14457226,+ | ||
}} | }} |
Latest revision as of 12:00, 23 July 2015
Short description: | p@chr10:14457224..14457226, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:14457224..14457226, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 3.61e-34 | 2 |
smooth muscle cell of the brain vasculature | 4.09e-23 | 3 |
fibroblast of tunica adventitia of artery | 8.69e-18 | 4 |
fibroblast of the aortic adventitia | 8.69e-18 | 4 |
smooth muscle cell of the subclavian artery | 1.40e-14 | 5 |
vascular associated smooth muscle cell | 2.22e-09 | 32 |
smooth muscle cell | 2.95e-07 | 43 |
smooth muscle myoblast | 2.95e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 3.61e-34 | 2 |
artery wall | 8.69e-18 | 4 |
tunica adventitia of artery | 8.69e-18 | 4 |
adventitia | 8.69e-18 | 4 |
tunica adventitia of blood vessel | 8.69e-18 | 4 |
aorta tunica adventitia | 8.69e-18 | 4 |
aorta wall | 8.69e-18 | 4 |
thoracic segment blood vessel | 1.40e-14 | 5 |
subclavian artery | 1.40e-14 | 5 |
brain vasculature | 1.83e-14 | 5 |
trunk blood vessel | 8.16e-11 | 7 |
blood vessel layer | 8.99e-11 | 7 |
systemic artery | 3.79e-09 | 33 |
systemic arterial system | 3.79e-09 | 33 |
vasculature | 1.14e-08 | 78 |
vascular system | 1.14e-08 | 78 |
artery | 2.04e-07 | 42 |
arterial blood vessel | 2.04e-07 | 42 |
arterial system | 2.04e-07 | 42 |
vasculature of organ | 2.63e-07 | 11 |