FFCP PHASE1:Hg19::chr10:18580030..18580069,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:18580030..18580069,+ | |||
|coexpression_cluster_id=C76 | |||
|description=CAGE_peak_at_chr10:18580030..18580069,+ | |description=CAGE_peak_at_chr10:18580030..18580069,+ | ||
|id=chr10:18580030..18580069,+ | |id=chr10:18580030..18580069,+ | ||
|ontology_enrichment_celltype=CL:0000242!1.76e-17!2;CL:0002553!1.21e-09!1;CL:0000312!1.60e-07!5;CL:0000095!5.43e-07!17;CL:0000123!5.43e-07!17 | |ontology_enrichment_celltype=CL:0000242!1.76e-17!2;CL:0002553!1.21e-09!1;CL:0000312!1.60e-07!5;CL:0000095!5.43e-07!17;CL:0000123!5.43e-07!17 | ||
|ontology_enrichment_celltype_v019=CL:0002535;3.11e-21;2!CL:0000123;5.69e-21;2!CL:0000242;5.69e-21;2!CL:0000312;3.22e-09;5!CL:0000240;6.78e-08;6!CL:0000311;6.78e-08;6!CL:0000079;6.78e-08;6!CL:0000237;6.78e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,3.11e-21,2;CL:0000242,5.70e-21,2;CL:0000312,3.22e-09,5;CL:0000240,6.78e-08,6;CL:0000311,6.78e-08,6;CL:0000079,6.78e-08,6;CL:0000237,6.78e-08,6;CL:0000036,6.78e-08,6;CL:0000357,6.78e-08,6;CL:0000114,6.78e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000357;6.78e-08;6!CL:0000114;6.78e-08;6 | |||
|ontology_enrichment_disease=DOID:2355!5.72e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:4362;2.53e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,2.53e-09,5 | |||
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|ontology_enrichment_uberon_v019=UBERON:0003296;1.41e-88;4!UBERON:0010133;1.41e-88;4!UBERON:0000007;3.49e-79;2!UBERON:0001894;3.85e-51;7!UBERON:0006955;3.11e-21;2!UBERON:0004801;3.11e-21;2!UBERON:0001905;5.69e-21;2!UBERON:0002757;5.69e-21;2!UBERON:0010134;5.69e-21;2!UBERON:0005408;5.69e-21;2!UBERON:0001899;5.69e-21;2!UBERON:0002784;3.42e-11;4!UBERON:0002368;4.03e-10;33!UBERON:0000002;5.54e-08;6!UBERON:0001560;5.54e-08;6!UBERON:0002780;1.98e-07;41!UBERON:0001890;1.98e-07;41!UBERON:0000949;2.00e-07;43 | |||
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|short_description=p@chr10:18580030..18580069,+ | |short_description=p@chr10:18580030..18580069,+ | ||
}} | }} |
Latest revision as of 12:23, 23 July 2015
Short description: | p@chr10:18580030..18580069, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:18580030..18580069, + |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 3.11e-21 | 2 |
Merkel cell | 5.70e-21 | 2 |
keratinocyte | 3.22e-09 | 5 |
stratified squamous epithelial cell | 6.78e-08 | 6 |
keratin accumulating cell | 6.78e-08 | 6 |
stratified epithelial cell | 6.78e-08 | 6 |
keratinizing barrier epithelial cell | 6.78e-08 | 6 |
epithelial fate stem cell | 6.78e-08 | 6 |
stratified epithelial stem cell | 6.78e-08 | 6 |
surface ectodermal cell | 6.78e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 1.41e-88 | 4 |
neuroendocrine gland | 1.41e-88 | 4 |
pituitary gland | 5.22e-79 | 2 |
diencephalon | 3.85e-51 | 7 |
future diencephalon | 3.85e-51 | 7 |
uterine epithelium | 3.11e-21 | 2 |
cervix epithelium | 3.11e-21 | 2 |
pineal body | 4.66e-21 | 2 |
regional part of epithalamus | 4.66e-21 | 2 |
secretory circumventricular organ | 4.66e-21 | 2 |
circumventricular organ | 4.66e-21 | 2 |
epithalamus | 4.66e-21 | 2 |
regional part of diencephalon | 3.10e-11 | 4 |
endocrine gland | 5.49e-11 | 35 |
regional part of forebrain | 2.74e-09 | 41 |
forebrain | 2.74e-09 | 41 |
anterior neural tube | 2.74e-09 | 41 |
future forebrain | 2.74e-09 | 41 |
endocrine system | 1.01e-08 | 45 |
uterine cervix | 5.54e-08 | 6 |
neck of organ | 5.54e-08 | 6 |
regional part of nervous system | 2.17e-07 | 53 |
regional part of brain | 2.17e-07 | 53 |
neural tube | 4.88e-07 | 56 |
neural rod | 4.88e-07 | 56 |
future spinal cord | 4.88e-07 | 56 |
neural keel | 4.88e-07 | 56 |
gland | 8.00e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 2.53e-09 | 5 |