FFCP PHASE1:Hg19::chr10:28287780..28287802,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55130 | |EntrezGene=55130 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=25583 | |HGNC=25583 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc009xky.2_5end | |association_with_transcript=0bp_to_uc009xky.2_5end | ||
|cluster_id=chr10:28287780..28287802,- | |||
|description=CAGE_peak_3_at_ARMC4_5end | |description=CAGE_peak_3_at_ARMC4_5end | ||
|id=chr10:28287780..28287802,- | |id=chr10:28287780..28287802,- | ||
|ontology_enrichment_celltype=CL:0002620!2.61e-08!23 | |ontology_enrichment_celltype=CL:0002620!2.61e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.38e-11;23!CL:0000222;3.56e-07;1!CL:0002032;8.47e-07;1!CL:0002574;8.47e-07;1!CL:0000557;8.47e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,3.08e-11,23;CL:0002574,8.02e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3307;7.86e-13;2!DOID:0060085;8.47e-07;1!DOID:3165;8.47e-07;1!DOID:0060121;8.47e-07;1!DOID:2438;8.47e-07;1!DOID:4418;8.47e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,7.89e-13,2;DOID:0060085,5.69e-07,1;DOID:3165,5.69e-07,1;DOID:0060121,5.69e-07,1;DOID:2438,5.69e-07,1;DOID:4418,5.69e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;6.12e-12;2!UBERON:0001282;8.47e-07;1!UBERON:0009842;8.47e-07;1!UBERON:0003704;8.47e-07;1!UBERON:0001171;8.47e-07;1!UBERON:0001172;8.47e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,3.70e-12,2;UBERON:0002097,1.17e-07,41;UBERON:0001282,6.38e-07,1;UBERON:0009842,6.38e-07,1;UBERON:0003704,6.38e-07,1;UBERON:0001171,6.38e-07,1;UBERON:0001172,6.38e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.189069634328136,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0.71153252537342,0,0,0,0,0,0,0.357198913136319,0,0.450445921933289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.352303495931295,0.161872944368132,0,0,0.122834317311768,0.206651562351531,0,0.741800787835671,0,0,0,0.250237039743928,0.277064115484183,0.877955241761676,0.30648779579902,0.45071417671979,0,0.717558542755448,0.427114777637135,0.423863802319124,1.80054657650641,0.92747276314595,3.09168648054755,3.35010341396862,0.337552664482532,0.0974370051611986,1.26216887122057,0.828449087780694,0,1.77504796258307,1.10827308050404,0,0,0,0,0,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0.591534000199219,0.842923450390509,1.44606617930089,0.55146986366197,0.217879444092406,0,0.269662616320329,0.98110732562673,0.38474715694639,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.34779121492523,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0.358234090811393,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0.871533458600294,0.599837947092342,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0,0,0.207970861530807,0,0.473107245101804,0,0.300946099727719,0,0,0,0,1.39013783148933,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,1.03333003348146,0.910455840033585,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0,0,0.103041011647722,0.27470839445503,0.330037999682352,0,0,0,0.096670718292122,0.154048617114644,0,0.137836572484531,0.322260734604821,0.435050081742686,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07923474549989,0.274537029736055,0.117812402345686,0,0,0,0,0,0,1.22849920267187,0.282810863907425,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0,0,0.422215270595328,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03051603426729,0.307240764308458,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.140669416410513,2.22617410045812,0,0.63337622438398,0.19924798825107,0,0.251932747854276,0.511343412510774,0,0,0,0,0,0.0986434056369336,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0,0.219385397153973,0.32681539055697,0,0.230850775511391,1.70913083770502,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,1.68798451622422,0.326465616318295,0,0,0,0,0,0,0,0,0.404406797884062,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.063186579628488,0.901940516486955,0.518440956986236,0,0,0.627865836814451,0,0,0,0,0,0,0.52418000472609,0.171986032471617,0,0.0730893170861856,0.0821154570532092,0,0,0,0.137041924646751,1.78843150532691,0,0.195551382734803,0.961905843018405,0.426905989478705,0.19980960958213,0.576361668616424,0,0,0,0.745515213392595,0,3.39760515184035,4.28871669880566,0.407992870545287,0,0,0,1.27746588066972,0,0,0,0,0,0,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0.528001682597033,0.179287339332845,0.959575986597226,0,0,0,0.542999601753713,0,0.653174720218818,3.59190574687462,0,0.681552087141687,0,0,0,0.129282956361551,0,0,0,0.640724475406168,2.82967749179399,0.828478110694391,0,0,0,0.638341257770182,0,0,0,0,0.314108192500469,0,0.122026264901963,0,1.14681839138014,0.443716206147409,0.18628920882415,0.138348634936231,0.124980407962107,0,0,0,0,0.144921028610825,0,0.233713309847224,0,0,0,0,0,0,0,0,0.159296767163702,0.449803112163605,0.465788870628778,0,0,1.04349012362347,0.150257608997218,0,1.22061219961398,0,0.322231671127465,0,0.398095888698616,0,0,0,2.52369796457302,0,0,0.260994291965212,0.226705925512272,0.231522474323834,0.489473409012935,0.179088841081487,0,0.438568099157414,0.176689145945881,0.192914038270915,1.01365464391844,0,0,0.607719912354764,0.138258436151731,0,0,0,0.655219697692825,0,0,0,0.213383459388282,0,2.83757976783418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0.3062454773532,0.385375350578757,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0.596748666348824,0.376051641746286,0.20170506870352,0,0,0.49131575253029,0.147856086217045,0,0,0.206686796501184,0.19024743058172,0,0,0,0.175871244359621,0,0,0,1.82089681270989,1.36597314810779,0,0,0.171488009437418,0.0679697329768317,0,0.118193840883968,0.333694205676207,0.470958557103084,0,0,0,0,0,0,0,0.116241425368125,0.173858272302579,2.40513409419076,0,0,0,0,0.354996002191696,0.766920642832419,0.423387050190929,0.22910686854405,0.93061915699296,0,0.111855431797792,0,0,0,0,0,0,0,0,0.237840181555137,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0.357107877211315,0.352894871715692,0,0,0,0,0,0.0679914901909147,0,0,1.85997509083376,0.462175628631418,0,0,0.109265571963696,0,0.101988829741982,0,0,0,0.303114792872958,0,0,0.103432995861895,0,0.714193294391221,0,0.0620747142958579,1.6819779387092,0,0.404234377916439,0,0,0,0.932388670104793,0.332660356546013,0.89543595472072,2.7749109928206,3.8614456457388,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.189069634328136,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0.71153252537342,0,0,0,0,0,0,0.357198913136319,0,0.450445921933289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.352303495931295,0.161872944368132,0,0,0.122834317311768,0.206651562351531,0,0.741800787835671,0,0,0,0.250237039743928,0.277064115484183,0.877955241761676,0.30648779579902,0.45071417671979,0,0.717558542755448,0.427114777637135,0.423863802319124,1.80054657650641,0.92747276314595,3.09168648054755,3.35010341396862,0.337552664482532,0.0974370051611986,1.26216887122057,0.828449087780694,0,1.77504796258307,1.10827308050404,0,0,0,0,0,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0.591534000199219,0.842923450390509,1.44606617930089,0.55146986366197,0.217879444092406,0,0.269662616320329,0.98110732562673,0.38474715694639,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.34779121492523,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0.358234090811393,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0.871533458600294,0.599837947092342,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0,0,0.207970861530807,0,0.473107245101804,0,0.300946099727719,0,0,0,0,1.39013783148933,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,1.03333003348146,0.910455840033585,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0,0,0.103041011647722,0.27470839445503,0.330037999682352,0,0,0,0.096670718292122,0.154048617114644,0,0.137836572484531,0.322260734604821,0.435050081742686,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07923474549989,0.274537029736055,0.117812402345686,0,0,0,0,0,0,1.22849920267187,0.282810863907425,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0,0,0,0.422215270595328,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03051603426729,0.307240764308458,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.140669416410513,2.22617410045812,0,0.63337622438398,0.19924798825107,0,0.251932747854276,0.511343412510774,0,0,0,0,0,0.0986434056369336,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0,0.219385397153973,0.32681539055697,0,0.230850775511391,1.70913083770502,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,1.68798451622422,0.326465616318295,0,0,0,0,0,0,0,0,0.404406797884062,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.063186579628488,0.901940516486955,0.518440956986236,0,0,0.627865836814451,0,0,0,0,0,0,0.52418000472609,0.171986032471617,0,0.0730893170861856,0.0821154570532092,0,0,0,0.137041924646751,1.78843150532691,0,0.195551382734803,0.961905843018405,0.426905989478705,0.19980960958213,0.576361668616424,0,0,0,0.745515213392595,0,3.39760515184035,4.28871669880566,0.407992870545287,0,0,0,1.27746588066972,0,0,0,0,0,0,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0.528001682597033,0.179287339332845,0.959575986597226,0,0,0,0.542999601753713,0,0.653174720218818,3.59190574687462,0,0.681552087141687,0,0,0,0.129282956361551,0,0,0,0.640724475406168,2.82967749179399,0.828478110694391,0,0,0,0.638341257770182,0,0,0,0,0.314108192500469,0,0.122026264901963,0,1.14681839138014,0.443716206147409,0.18628920882415,0.138348634936231,0.124980407962107,0,0,0,0,0.144921028610825,0,0.233713309847224,0,0,0,0,0,0,0,0,0.159296767163702,0.449803112163605,0.465788870628778,0,0,1.04349012362347,0.150257608997218,0,1.22061219961398,0,0.322231671127465,0,0.398095888698616,0,0,0,2.52369796457302,0,0,0.260994291965212,0.226705925512272,0.231522474323834,0.489473409012935,0.179088841081487,0,0.438568099157414,0.176689145945881,0.192914038270915,1.01365464391844,0,0,0.607719912354764,0.138258436151731,0,0,0,0.655219697692825,0,0,0,0.213383459388282,0,2.83757976783418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0.3062454773532,0.385375350578757,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0.596748666348824,0.376051641746286,0.20170506870352,0,0,0.49131575253029,0.147856086217045,0,0,0.206686796501184,0.19024743058172,0,0,0,0.175871244359621,0,0,0,1.82089681270989,1.36597314810779,0,0,0.171488009437418,0.0679697329768317,0,0.118193840883968,0.333694205676207,0.470958557103084,0,0,0,0,0,0,0,0.116241425368125,0.173858272302579,2.40513409419076,0,0,0,0,0.354996002191696,0.766920642832419,0.423387050190929,0.22910686854405,0.93061915699296,0,0.111855431797792,0,0,0,0,0,0,0,0,0.237840181555137,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0.357107877211315,0.352894871715692,0,0,0,0,0,0.0679914901909147,0,0,1.85997509083376,0.462175628631418,0,0,0.109265571963696,0,0.101988829741982,0,0,0,0.303114792872958,0,0,0.103432995861895,0,0.714193294391221,0,0.0620747142958579,1.6819779387092,0,0.404234377916439,0,0,0,0.932388670104793,0.332660356546013,0.89543595472072,2.7749109928206,3.8614456457388,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p3@ARMC4 | |short_description=p3@ARMC4 | ||
}} | }} |
Latest revision as of 19:35, 17 September 2015
Short description: | p3@ARMC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ARMC4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc009xky.2_5end |
EntrezGene: | ARMC4 |
HGNC: | 25583 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 3.08e-11 | 23 |
stromal cell of pancreas | 8.02e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 3.70e-12 | 2 |
skin of body | 1.17e-07 | 41 |
intralobular bile duct | 6.38e-07 | 1 |
acinus | 6.38e-07 | 1 |
intrahepatic bile duct | 6.38e-07 | 1 |
portal lobule | 6.38e-07 | 1 |
hepatic acinus | 6.38e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
teratoma | 7.89e-13 | 2 |
organ system benign neoplasm | 5.69e-07 | 1 |
skin benign neoplasm | 5.69e-07 | 1 |
integumentary system benign neoplasm | 5.69e-07 | 1 |
dermis tumor | 5.69e-07 | 1 |
cutaneous fibrous histiocytoma | 5.69e-07 | 1 |