FFCP PHASE1:Hg19::chr14:23002427..23002444,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12038 | |HGNC=12038 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000390527_5end | |association_with_transcript=0bp_to_ENST00000390527_5end | ||
|cluster_id=chr14:23002427..23002444,+ | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_1_at_TRAJ10_5end | |description=CAGE_peak_1_at_TRAJ10_5end | ||
|id=chr14:23002427..23002444,+ | |id=chr14:23002427..23002444,+ | ||
|ontology_enrichment_celltype=CL:0000838!3.23e-37!52;CL:0000542!2.13e-36!53;CL:0000051!2.13e-36!53;CL:0000791!6.47e-34!18;CL:0000789!6.47e-34!18;CL:0002420!6.47e-34!18;CL:0002419!6.47e-34!18;CL:0000790!6.47e-34!18;CL:0000084!1.43e-23!25;CL:0000827!1.43e-23!25;CL:0000625!8.76e-22!11;CL:0000945!2.28e-17!24;CL:0000826!2.28e-17!24;CL:0000624!4.66e-16!6;CL:0002087!5.16e-14!119;CL:0002031!3.26e-13!124;CL:0000898!1.38e-12!3;CL:0000738!3.95e-12!140;CL:0002032!2.16e-09!165;CL:0000837!2.16e-09!165;CL:0000815!5.98e-09!2;CL:0000792!5.98e-09!2;CL:0002677!5.98e-09!2;CL:0000037!9.00e-09!172;CL:0000566!9.00e-09!172;CL:0000988!5.66e-08!182 | |ontology_enrichment_celltype=CL:0000838!3.23e-37!52;CL:0000542!2.13e-36!53;CL:0000051!2.13e-36!53;CL:0000791!6.47e-34!18;CL:0000789!6.47e-34!18;CL:0002420!6.47e-34!18;CL:0002419!6.47e-34!18;CL:0000790!6.47e-34!18;CL:0000084!1.43e-23!25;CL:0000827!1.43e-23!25;CL:0000625!8.76e-22!11;CL:0000945!2.28e-17!24;CL:0000826!2.28e-17!24;CL:0000624!4.66e-16!6;CL:0002087!5.16e-14!119;CL:0002031!3.26e-13!124;CL:0000898!1.38e-12!3;CL:0000738!3.95e-12!140;CL:0002032!2.16e-09!165;CL:0000837!2.16e-09!165;CL:0000815!5.98e-09!2;CL:0000792!5.98e-09!2;CL:0002677!5.98e-09!2;CL:0000037!9.00e-09!172;CL:0000566!9.00e-09!172;CL:0000988!5.66e-08!182 | ||
|ontology_enrichment_celltype_v019=CL:0000625;3.72e-12;11!CL:0000945;5.66e-10;24!CL:0000791;1.20e-07;18!CL:0000789;1.20e-07;18!CL:0002419;1.20e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,5.62e-13,52;CL:0000542,1.01e-12,53;CL:0000051,1.01e-12,53;CL:0000625,4.42e-12,11;CL:0000945,5.66e-10,24;CL:0000826,5.66e-10,24;CL:0000791,1.33e-07,18;CL:0000789,1.33e-07,18;CL:0002420,1.33e-07,18;CL:0002419,1.33e-07,18;CL:0000790,1.33e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;1.20e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;8.62e-16;1!DOID:0050177;8.62e-16;1!DOID:0050427;8.62e-16;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,8.63e-16,1;DOID:0050177,8.63e-16,1;DOID:0050427,8.63e-16,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!2.30e-13!7;UBERON:0002370!2.07e-09!4;UBERON:0005058!2.07e-09!4;UBERON:0009113!2.07e-09!4;UBERON:0003295!2.07e-09!4;UBERON:0005562!2.07e-09!4 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@TRAJ10 | |short_description=p1@TRAJ10 | ||
}} | }} |
Latest revision as of 06:36, 19 September 2015
Short description: | p1@TRAJ10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRAJ10_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | 0bp_to_ENST00000390527_5end |
EntrezGene: | NA |
HGNC: | 12038 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 5.62e-13 | 52 |
lymphocyte | 1.01e-12 | 53 |
common lymphoid progenitor | 1.01e-12 | 53 |
CD8-positive, alpha-beta T cell | 4.42e-12 | 11 |
lymphocyte of B lineage | 5.66e-10 | 24 |
pro-B cell | 5.66e-10 | 24 |
mature alpha-beta T cell | 1.33e-07 | 18 |
alpha-beta T cell | 1.33e-07 | 18 |
immature T cell | 1.33e-07 | 18 |
mature T cell | 1.33e-07 | 18 |
immature alpha-beta T cell | 1.33e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 8.63e-16 | 1 |
monogenic disease | 8.63e-16 | 1 |
xeroderma pigmentosum | 8.63e-16 | 1 |