FFCP PHASE1:Mm9::chr5:8046122..8046152,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=109552 | |EntrezGene=109552 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=195 | |||
|TSSclassifier=NA | |||
|UniProt=Q6P069 | |UniProt=Q6P069 | ||
|association_with_transcript=42bp_to_NM_025618,uc008wjh.1_5end | |association_with_transcript=42bp_to_NM_025618,uc008wjh.1_5end | ||
|cluster_id=chr5:8046122..8046152,+ | |||
|description=CAGE_peak_3_at_Sri_5end | |description=CAGE_peak_3_at_Sri_5end | ||
|id=chr5:8046122..8046152,+ | |id=chr5:8046122..8046152,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.00e-08!9;CL:0002251!1.00e-08!9 | |ontology_enrichment_celltype=CL:0002563!1.00e-08!9;CL:0002251!1.00e-08!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.01e-10,9;CL:0002251,4.01e-10,9;CL:0000239,6.45e-07,6;CL:0000677,6.45e-07,6;CL:0000584,6.45e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!7.96e-22!59;UBERON:0000160!5.97e-19!43;UBERON:0000344!2.80e-14!15;UBERON:0001242!1.44e-12!13;UBERON:0000060!1.44e-12!13;UBERON:0001262!1.44e-12!13;UBERON:0004786!1.44e-12!13;UBERON:0003350!1.00e-08!9;UBERON:0004808!1.00e-08!9;UBERON:0001277!1.00e-08!9;UBERON:0004923!1.72e-08!24;UBERON:0006554!1.56e-07!16;UBERON:0002113!3.86e-07!14;UBERON:0003918!3.86e-07!14;UBERON:0005095!3.86e-07!14;UBERON:0007687!3.86e-07!14;UBERON:0004119!7.31e-07!130;UBERON:0000925!7.31e-07!130;UBERON:0006595!7.31e-07!130;UBERON:0001008!7.49e-07!17;UBERON:0001007!8.69e-07!128;UBERON:0001555!8.69e-07!128;UBERON:0007026!8.69e-07!128 | |ontology_enrichment_uberon=UBERON:0005409!7.96e-22!59;UBERON:0000160!5.97e-19!43;UBERON:0000344!2.80e-14!15;UBERON:0001242!1.44e-12!13;UBERON:0000060!1.44e-12!13;UBERON:0001262!1.44e-12!13;UBERON:0004786!1.44e-12!13;UBERON:0003350!1.00e-08!9;UBERON:0004808!1.00e-08!9;UBERON:0001277!1.00e-08!9;UBERON:0004923!1.72e-08!24;UBERON:0006554!1.56e-07!16;UBERON:0002113!3.86e-07!14;UBERON:0003918!3.86e-07!14;UBERON:0005095!3.86e-07!14;UBERON:0007687!3.86e-07!14;UBERON:0004119!7.31e-07!130;UBERON:0000925!7.31e-07!130;UBERON:0006595!7.31e-07!130;UBERON:0001008!7.49e-07!17;UBERON:0001007!8.69e-07!128;UBERON:0001555!8.69e-07!128;UBERON:0007026!8.69e-07!128 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.85e-33,47;UBERON:0000160,3.52e-33,31;UBERON:0000344,9.34e-17,15;UBERON:0001242,1.04e-14,13;UBERON:0001262,1.04e-14,13;UBERON:0004786,1.04e-14,13;UBERON:0003350,4.01e-10,9;UBERON:0004808,4.01e-10,9;UBERON:0001277,4.01e-10,9;UBERON:0004923,1.36e-08,24;UBERON:0000485,7.98e-08,11;UBERON:0001007,3.10e-07,116;UBERON:0001555,3.10e-07,116;UBERON:0007026,3.10e-07,116;UBERON:0004119,6.45e-07,118;UBERON:0000925,6.45e-07,118;UBERON:0006595,6.45e-07,118 | |||
|phase1_expression=0,31.4077866875425,30.9399482784885,30.5488853419898,36.5653882860833,23.6709773395765,32.004931761587,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,47.8377344152286,41.0642613110234,56.848964447387,51.2606775429299,44.3870739332931,120.094801096428,64.5197132185423,41.6853360031973,0,0,0,48.8159237379654,61.1743494919252,53.6965406970031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3928870897496,0,0,0,0,0,0,0,0,0,0,21.9233049060595,0,0,0,0,0,0,0,0.251333182659351,0.247194967734374,0,0,0,0,0,419.381462740775,0,0,90.6872545990499,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,369.408199375886,73.5172575324653,2.34617075588757,3.94802342162745,5.67016829817211,21.176770085451,32.2448163575062,46.0346015192393,63.11236518542,32.2809951259061,31.668236308834,29.6445143341315,32.9489307231313,62.0185391971413,96.1814321942389,100.168060446947,0.948339504765408,1.5994791765362,3.38123207019241,10.5898690479563,20.752916126936,9.39819986530269,19.7297995827683,24.9461150085528,42.5466552450126,23.5688583090639,0.296452627087149,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.339490171550376,0,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,5.68542244970086,0,0,0,0,0,0,0.36012218806262,0,0,0,0,0,0,0.938686832254841,0,0.220528398054962,0,0,0,0,0.328281799490123,49.2602613904448,0,0,0,0,0,0,0,0,0,0,238.667654503778,0.474503990371703,1.01659733563424,3.88819226958485,7.94535524854981,21.6178938108716,20.6342449968776,21.159284665686,98.9437460699632,292.929839639452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.419226325255965,1.65459157605013,2.66696073361938,3.7086310303001,2.24643446714271,1.76888048234658,1.77435509923168,3.77252682772152,3.183811253976,2.94515701062399,2.92920891673628,1.42888107384922,1.50649623728312,2.70072908649187,1.23625770240992,3.53277408322554,4.80016953339582,2.12970967391205,2.38436189947321,1.30811774969096,1.97629698872194,2.70766745253365,2.74391959309159,3.15683653725411,1.90125759384206,1.68342681497322,2.84724043498018,2.06859412988683,1.22769312950907,2.01417893541756,1.92906610981141,0,2.10538447600868,1.71896843238639,0.57386499620653,0,0 | |phase1_expression=0,31.4077866875425,30.9399482784885,30.5488853419898,36.5653882860833,23.6709773395765,32.004931761587,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,47.8377344152286,41.0642613110234,56.848964447387,51.2606775429299,44.3870739332931,120.094801096428,64.5197132185423,41.6853360031973,0,0,0,48.8159237379654,61.1743494919252,53.6965406970031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3928870897496,0,0,0,0,0,0,0,0,0,0,21.9233049060595,0,0,0,0,0,0,0,0.251333182659351,0.247194967734374,0,0,0,0,0,419.381462740775,0,0,90.6872545990499,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,369.408199375886,73.5172575324653,2.34617075588757,3.94802342162745,5.67016829817211,21.176770085451,32.2448163575062,46.0346015192393,63.11236518542,32.2809951259061,31.668236308834,29.6445143341315,32.9489307231313,62.0185391971413,96.1814321942389,100.168060446947,0.948339504765408,1.5994791765362,3.38123207019241,10.5898690479563,20.752916126936,9.39819986530269,19.7297995827683,24.9461150085528,42.5466552450126,23.5688583090639,0.296452627087149,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.339490171550376,0,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,5.68542244970086,0,0,0,0,0,0,0.36012218806262,0,0,0,0,0,0,0.938686832254841,0,0.220528398054962,0,0,0,0,0.328281799490123,49.2602613904448,0,0,0,0,0,0,0,0,0,0,238.667654503778,0.474503990371703,1.01659733563424,3.88819226958485,7.94535524854981,21.6178938108716,20.6342449968776,21.159284665686,98.9437460699632,292.929839639452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.419226325255965,1.65459157605013,2.66696073361938,3.7086310303001,2.24643446714271,1.76888048234658,1.77435509923168,3.77252682772152,3.183811253976,2.94515701062399,2.92920891673628,1.42888107384922,1.50649623728312,2.70072908649187,1.23625770240992,3.53277408322554,4.80016953339582,2.12970967391205,2.38436189947321,1.30811774969096,1.97629698872194,2.70766745253365,2.74391959309159,3.15683653725411,1.90125759384206,1.68342681497322,2.84724043498018,2.06859412988683,1.22769312950907,2.01417893541756,1.92906610981141,0,2.10538447600868,1.71896843238639,0.57386499620653,0,0 | ||
|short_description=p3@Sri | |short_description=p3@Sri | ||
}} | }} |
Latest revision as of 06:03, 26 September 2015
Short description: | p3@Sri |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Sri_5end |
Coexpression cluster: | MCL_coexpression_mm9:195 |
Association with transcript: | 42bp_to_NM_025618, uc008wjh.1_5end |
EntrezGene: | Sri |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.01e-10 | 9 |
epithelial cell of alimentary canal | 4.01e-10 | 9 |
brush border epithelial cell | 6.45e-07 | 6 |
gut absorptive cell | 6.45e-07 | 6 |
enterocyte | 6.45e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.85e-33 | 47 |
intestine | 3.52e-33 | 31 |
mucosa | 9.34e-17 | 15 |
intestinal mucosa | 1.04e-14 | 13 |
wall of intestine | 1.04e-14 | 13 |
gastrointestinal system mucosa | 1.04e-14 | 13 |
epithelium of mucosa | 4.01e-10 | 9 |
gastrointestinal system epithelium | 4.01e-10 | 9 |
intestinal epithelium | 4.01e-10 | 9 |
organ component layer | 1.36e-08 | 24 |
simple columnar epithelium | 7.98e-08 | 11 |
digestive system | 3.10e-07 | 116 |
digestive tract | 3.10e-07 | 116 |
primitive gut | 3.10e-07 | 116 |
endoderm-derived structure | 6.45e-07 | 118 |
endoderm | 6.45e-07 | 118 |
presumptive endoderm | 6.45e-07 | 118 |