FFCP PHASE1:Hg19::chr10:47023421..47023433,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:47023421..47023433,- | |||
|coexpression_cluster_id=C2060 | |||
|description=CAGE_peak_at_chr10:47023421..47023433,- | |description=CAGE_peak_at_chr10:47023421..47023433,- | ||
|id=chr10:47023421..47023433,- | |id=chr10:47023421..47023433,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;7.05e-18;2!CL:0000540;7.80e-07;6!CL:0000404;7.80e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.44e-17,8;CL:0000540,8.02e-07,6;CL:0000031,8.02e-07,6;CL:0000404,8.02e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.17e-98;3!CL:0000031;7.80e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.46e-43!57;UBERON:0005068!1.46e-43!57;UBERON:0006241!1.46e-43!57;UBERON:0007135!1.46e-43!57;UBERON:0001017!7.97e-40!82;UBERON:0002616!1.13e-38!59;UBERON:0005743!1.29e-37!86;UBERON:0003075!1.39e-35!86;UBERON:0007284!1.39e-35!86;UBERON:0000955!5.30e-34!69;UBERON:0006238!5.30e-34!69;UBERON:0002346!1.20e-33!90;UBERON:0000073!2.57e-33!94;UBERON:0001016!2.57e-33!94;UBERON:0007023!1.53e-26!115;UBERON:0002780!1.43e-24!41;UBERON:0001890!1.43e-24!41;UBERON:0006240!1.43e-24!41;UBERON:0003080!6.89e-24!42;UBERON:0004733!1.48e-23!12;UBERON:0002028!1.48e-23!12;UBERON:0007277!1.48e-23!12;UBERON:0003076!7.91e-23!15;UBERON:0003057!7.91e-23!15;UBERON:0004732!1.33e-21!13;UBERON:0002020!2.61e-21!34;UBERON:0003528!2.61e-21!34;UBERON:0001893!7.52e-21!34;UBERON:0000153!1.04e-20!129;UBERON:0007811!1.04e-20!129;UBERON:0000033!1.47e-20!123;UBERON:0004121!3.85e-20!169;UBERON:0001869!1.31e-19!32;UBERON:0000924!1.80e-19!173;UBERON:0006601!1.80e-19!173;UBERON:0003056!5.28e-19!61;UBERON:0002791!6.41e-19!33;UBERON:0002298!6.94e-16!8;UBERON:0002619!1.24e-15!22;UBERON:0000025!1.79e-15!194;UBERON:0002680!1.56e-14!9;UBERON:0001895!1.56e-14!9;UBERON:0010092!1.56e-14!9;UBERON:0000956!1.47e-13!25;UBERON:0000203!1.47e-13!25;UBERON:0000483!2.84e-12!309;UBERON:0000119!4.68e-12!312;UBERON:0000349!5.84e-12!5;UBERON:0004111!1.36e-11!241;UBERON:0001896!1.39e-11!3;UBERON:0005290!1.39e-11!3;UBERON:0010096!1.39e-11!3;UBERON:0000988!1.44e-11!3;UBERON:0000477!1.68e-11!286;UBERON:0001950!2.02e-11!20;UBERON:0001871!9.49e-11!7;UBERON:0000475!3.34e-10!365;UBERON:0002420!7.84e-10!9;UBERON:0007245!7.84e-10!9;UBERON:0010009!7.84e-10!9;UBERON:0010011!7.84e-10!9;UBERON:0000454!7.84e-10!9;UBERON:0002308!1.08e-09!9;UBERON:0000125!1.08e-09!9;UBERON:0000064!4.85e-09!219;UBERON:0001876!1.49e-08!2;UBERON:0000481!1.86e-08!347;UBERON:0002148!2.75e-08!2;UBERON:0009662!2.75e-08!2;UBERON:0001954!4.37e-08!2;UBERON:0003022!4.37e-08!2;UBERON:0002421!4.37e-08!2;UBERON:0002600!4.37e-08!2;UBERON:0000062!6.97e-07!511 | |ontology_enrichment_uberon=UBERON:0001049!1.46e-43!57;UBERON:0005068!1.46e-43!57;UBERON:0006241!1.46e-43!57;UBERON:0007135!1.46e-43!57;UBERON:0001017!7.97e-40!82;UBERON:0002616!1.13e-38!59;UBERON:0005743!1.29e-37!86;UBERON:0003075!1.39e-35!86;UBERON:0007284!1.39e-35!86;UBERON:0000955!5.30e-34!69;UBERON:0006238!5.30e-34!69;UBERON:0002346!1.20e-33!90;UBERON:0000073!2.57e-33!94;UBERON:0001016!2.57e-33!94;UBERON:0007023!1.53e-26!115;UBERON:0002780!1.43e-24!41;UBERON:0001890!1.43e-24!41;UBERON:0006240!1.43e-24!41;UBERON:0003080!6.89e-24!42;UBERON:0004733!1.48e-23!12;UBERON:0002028!1.48e-23!12;UBERON:0007277!1.48e-23!12;UBERON:0003076!7.91e-23!15;UBERON:0003057!7.91e-23!15;UBERON:0004732!1.33e-21!13;UBERON:0002020!2.61e-21!34;UBERON:0003528!2.61e-21!34;UBERON:0001893!7.52e-21!34;UBERON:0000153!1.04e-20!129;UBERON:0007811!1.04e-20!129;UBERON:0000033!1.47e-20!123;UBERON:0004121!3.85e-20!169;UBERON:0001869!1.31e-19!32;UBERON:0000924!1.80e-19!173;UBERON:0006601!1.80e-19!173;UBERON:0003056!5.28e-19!61;UBERON:0002791!6.41e-19!33;UBERON:0002298!6.94e-16!8;UBERON:0002619!1.24e-15!22;UBERON:0000025!1.79e-15!194;UBERON:0002680!1.56e-14!9;UBERON:0001895!1.56e-14!9;UBERON:0010092!1.56e-14!9;UBERON:0000956!1.47e-13!25;UBERON:0000203!1.47e-13!25;UBERON:0000483!2.84e-12!309;UBERON:0000119!4.68e-12!312;UBERON:0000349!5.84e-12!5;UBERON:0004111!1.36e-11!241;UBERON:0001896!1.39e-11!3;UBERON:0005290!1.39e-11!3;UBERON:0010096!1.39e-11!3;UBERON:0000988!1.44e-11!3;UBERON:0000477!1.68e-11!286;UBERON:0001950!2.02e-11!20;UBERON:0001871!9.49e-11!7;UBERON:0000475!3.34e-10!365;UBERON:0002420!7.84e-10!9;UBERON:0007245!7.84e-10!9;UBERON:0010009!7.84e-10!9;UBERON:0010011!7.84e-10!9;UBERON:0000454!7.84e-10!9;UBERON:0002308!1.08e-09!9;UBERON:0000125!1.08e-09!9;UBERON:0000064!4.85e-09!219;UBERON:0001876!1.49e-08!2;UBERON:0000481!1.86e-08!347;UBERON:0002148!2.75e-08!2;UBERON:0009662!2.75e-08!2;UBERON:0001954!4.37e-08!2;UBERON:0003022!4.37e-08!2;UBERON:0002421!4.37e-08!2;UBERON:0002600!4.37e-08!2;UBERON:0000062!6.97e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;8.87e-50;6!UBERON:0002680;1.55e-33;9!UBERON:0001895;1.55e-33;9!UBERON:0004733;2.13e-25;12!UBERON:0002028;2.13e-25;12!UBERON:0004732;1.62e-23;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,7.51e-50,6;UBERON:0006215,7.51e-50,6;UBERON:0002680,1.39e-33,9;UBERON:0001895,1.39e-33,9;UBERON:0010092,1.39e-33,9;UBERON:0004733,1.96e-25,12;UBERON:0002028,1.96e-25,12;UBERON:0007277,1.96e-25,12;UBERON:0004732,1.50e-23,13;UBERON:0003076,1.57e-20,15;UBERON:0003057,1.57e-20,15;UBERON:0001017,2.00e-10,81;UBERON:0001016,1.91e-09,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0.343135620597051,0,0,0.100528972411631,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0.254094624222463,2.60279707715243,2.31986643833309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,1.52581736317083,4.09143261745531,1.47773809476774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.92562821219883,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0.665574309221114,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0.227662191351298,0,0,0,0.339848664884159,0,0,0,0,0.157115589916002,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0.109940516745429,0.150962843566674,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.413731983447581,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0.343135620597051,0,0,0.100528972411631,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0.254094624222463,2.60279707715243,2.31986643833309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,1.52581736317083,4.09143261745531,1.47773809476774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.92562821219883,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0.665574309221114,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0.227662191351298,0,0,0,0.339848664884159,0,0,0,0,0.157115589916002,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0.109940516745429,0.150962843566674,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.413731983447581,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:47023421..47023433,- | |short_description=p@chr10:47023421..47023433,- | ||
}} | }} |
Latest revision as of 13:51, 23 July 2015
Short description: | p@chr10:47023421..47023433, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:47023421..47023433, - |
Coexpression cluster: | C2060_cerebellum_Neural_parietal_Neurons_brain_maxillary_occipital |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.44e-17 | 8 |
neuron | 8.02e-07 | 6 |
neuroblast | 8.02e-07 | 6 |
electrically signaling cell | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 7.51e-50 | 6 |
rhombic lip | 7.51e-50 | 6 |
regional part of metencephalon | 1.39e-33 | 9 |
metencephalon | 1.39e-33 | 9 |
future metencephalon | 1.39e-33 | 9 |
segmental subdivision of hindbrain | 1.96e-25 | 12 |
hindbrain | 1.96e-25 | 12 |
presumptive hindbrain | 1.96e-25 | 12 |
segmental subdivision of nervous system | 1.50e-23 | 13 |
posterior neural tube | 1.57e-20 | 15 |
chordal neural plate | 1.57e-20 | 15 |
central nervous system | 2.00e-10 | 81 |
nervous system | 1.91e-09 | 89 |