FFCP PHASE1:Mm9::chr5:92864245..92864261,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=269113 | |EntrezGene=269113 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8BTS4 | |UniProt=Q8BTS4 | ||
|association_with_transcript=0bp_to_ENSMUST00000038514_5end | |association_with_transcript=0bp_to_ENSMUST00000038514_5end | ||
|cluster_id=chr5:92864245..92864261,- | |||
|description=CAGE_peak_4_at_Nup54_5end | |description=CAGE_peak_4_at_Nup54_5end | ||
|id=chr5:92864245..92864261,- | |id=chr5:92864245..92864261,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.96e-07,9;CL:0000789,7.96e-07,9;CL:0002420,7.96e-07,9;CL:0002419,7.96e-07,9;CL:0000790,7.96e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!5.27e-08!23;UBERON:0000974!5.27e-08!23;UBERON:0004807!5.27e-08!23;UBERON:0005058!5.27e-08!23;UBERON:0003351!5.27e-08!23;UBERON:0009113!5.27e-08!23;UBERON:0003295!5.27e-08!23;UBERON:0009722!5.27e-08!23;UBERON:0005562!5.27e-08!23;UBERON:0007690!5.27e-08!23;UBERON:0000072!5.51e-08!27;UBERON:0006562!1.91e-07!24;UBERON:0001557!1.91e-07!24;UBERON:0001042!1.91e-07!24;UBERON:0008814!1.91e-07!24;UBERON:0009145!1.91e-07!24;UBERON:0004177!2.24e-07!29;UBERON:0003408!5.15e-07!24 | |ontology_enrichment_uberon=UBERON:0002370!5.27e-08!23;UBERON:0000974!5.27e-08!23;UBERON:0004807!5.27e-08!23;UBERON:0005058!5.27e-08!23;UBERON:0003351!5.27e-08!23;UBERON:0009113!5.27e-08!23;UBERON:0003295!5.27e-08!23;UBERON:0009722!5.27e-08!23;UBERON:0005562!5.27e-08!23;UBERON:0007690!5.27e-08!23;UBERON:0000072!5.51e-08!27;UBERON:0006562!1.91e-07!24;UBERON:0001557!1.91e-07!24;UBERON:0001042!1.91e-07!24;UBERON:0008814!1.91e-07!24;UBERON:0009145!1.91e-07!24;UBERON:0004177!2.24e-07!29;UBERON:0003408!5.15e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.14e-09,23;UBERON:0000974,1.14e-09,23;UBERON:0004807,1.14e-09,23;UBERON:0005058,1.14e-09,23;UBERON:0003351,1.14e-09,23;UBERON:0009113,1.14e-09,23;UBERON:0003295,1.14e-09,23;UBERON:0009722,1.14e-09,23;UBERON:0005562,1.14e-09,23;UBERON:0007690,1.14e-09,23;UBERON:0000072,2.12e-09,27;UBERON:0000153,2.86e-09,43;UBERON:0007811,3.39e-09,36;UBERON:0006562,8.08e-09,24;UBERON:0003408,8.08e-09,24;UBERON:0001557,8.08e-09,24;UBERON:0001042,8.08e-09,24;UBERON:0008814,8.08e-09,24;UBERON:0009145,8.08e-09,24;UBERON:0004177,2.19e-08,29;UBERON:0005057,2.19e-08,29;UBERON:0000077,3.00e-07,35 | |||
|phase1_expression=2.24208385946712,0.348975407639361,0,0,0,1.17515490338323,1.63528848416868,2.96983643915625,5.34997144176334,3.7450324211519,6.16384685611818,6.78063351460359,2.73921167889929,3.14713448708391,2.33176833270964,0.607425802169478,0.699561878128147,1.73504190947031,1.50825876966313,4.2438965179803,0.510259740906419,1.58865521921416,0.783599367416806,0.639969691173627,0.68822784320151,0.57423196411502,0.86152399231815,0.861884930743556,0.190023419456374,0,0.443461021310609,1.27006134691926,2.46025915033828,0,0.577703239502549,0.332469290716985,0.612508068787107,0.837063261473815,1.5626706890476,2.09409497589519,2.35292595212406,2.04913645487534,1.94204141212461,1.1330713617802,1.52065396829272,1.28482726513177,0.782391344348039,0,0,0.58328969722285,0.979904951377538,0,1.67782606057736,2.17608642603403,2.35265659399725,0.514518872071894,0,0,0.809265843438391,2.11596391708813,1.26766280701236,0,0,0,0,0.7104801149461,0.299600110518405,0.768436610643109,2.69592992002042,2.70011876663381,2.73422449756797,0.571301968807607,0,2.57230678351403,1.82106394934649,1.83843757322004,0,0.510749352340751,0.614426133024974,2.50583946687368,1.18933936683133,1.04182674111352,1.3959149950069,0.56276261003168,0.763991238884051,0.589257170947335,0.427115042397309,2.05039390407831,2.57469057332826,1.51143120213571,0,1.72084775396277,3.39985666853875,0.539703191637817,0,0,0.421333260395256,0.340860645156116,1.03914401841148,1.41335829804136,1.12674735821344,0,0,0,2.16491041011214,3.29367825117628,1.01104889002957,0.34255163915718,2.58937883647172,1.48442139064825,2.25530924795977,2.13125834818499,1.38369298353635,0.753613202763113,1.05829836422134,0.628332956648377,2.22475470960936,0.433798070759735,0,1.13236794963186,1.32504911076236,1.45462575940567,1.86391761218122,0.878342391034642,0,0.510914110417183,1.67741174308288,1.19980546198682,1.01656181658452,0.149790639404823,1.37250180845588,3.14135880282161,0.695297280769106,0.511430914660661,0.62336413367868,0.324482526135515,1.52759045775474,0.622034853050465,0.505445516867349,0.420883711772948,2.99277018814219,2.29902104433473,2.88099407688559,1.35634336052144,2.17716797284249,1.92170580427275,1.40552586839593,1.03481348295606,1.94011193639558,3.40390944302075,2.28736461413134,1.53437012699302,1.39023624612799,0.696504333044333,0.61734640922383,2.38841120182192,0.702213187313235,1.28673953557358,1.42081749697796,1.24275463521301,2.81431271977315,1.98068267607116,2.13070262026689,1.77087808572663,0.617068451549513,0.232533944750408,0.536546802799238,1.28441876603886,1.15191894939436,0.32833492815819,0.405344047729279,0.292399974850665,0.439100230582101,0.402619256281115,1.26173969138476,2.98423375899925,0.330418782983798,0.793351699990633,2.77274725695804,2.55460339046482,1.54640953586512,1.00841762311671,1.11189021922435,0.190225626112559,0,0,2.01068167040216,0.994782360205754,0,1.79763881730844,0,0.199141273254367,1.32767530667157,1.37098215131675,1.1270773567308,1.01825663922657,0.969762435838129,1.19230893813542,0.505892296994058,0.442830443938806,0.627994911365499,0.616985819609003,1.48226313543574,2.00214126859313,0.982794975566015,2.24862112384854,2.84004169943904,1.20588579876208,1.01850340712568,1.43848068725405,0.486405680325106,1.92192989231657,0,0.744281895337007,1.5601883655728,0.505157755894224,1.07638448113147,0.482443521363367,0.923765950833023,3.03186258832776,1.79261474086228,1.86719594352707,1.64283173801951,1.50755631697634,0,0.390267295715598,0.472905432318573,0.44292937929755,0.797273843287435,0.327726629431476,0.690739927463582,0.144649058581512,0,0.54390568381871,0.983528546038072,0.827810238914197,0,0.234423373184406,2.78689407140348,0.252470927204373,1.57754109708128,1.56175497718655,0.861693590931196,2.38968797952552,0.668396022247182,1.41538265394416,0.809621403349789,1.16902343164525,2.37172666767914,1.60660658210904,1.41940085208269,1.24645922567079,1.79175655288934,0.659880491890142,0,1.45668381692989,1.81394134178851,1.13163047853539,0.885905678642318,0.614870295887855,1.55056975900933,0.727067458955011,0,0.948110273807448,0,0,0.340439605753788,1.8006109403131,1.68166288917581,1.28602221018955,1.41872186913819,1.24858172321449,1.97458824722545,0.608929898229199,1.87737366450968,2.96564899209348,0.661585194164886,0.49465875882444,1.45317984026315,1.08563264870681,1.43246812803764,0.492422699235184,0,0.18542530201051,0.683483523191411,0.82554747185289,1.11116716421827,1.13021074202815,2.05041341581538,2.74533807847827,1.86976272993241,2.09927178485487,2.07299960706636,0.954670618015114,2.21435195506795,1.62655573701479,1.94409613479242,1.04544148007234,0.87345025498471,0.809186078308924,0.909188012978695,1.04702376793612,0.388844919875379,0,0.56369293868419,2.69129782879162,1.65458490457098,1.16670713006429,1.6790777052105,2.36538575687089,3.0512882047896,1.95306577265925,2.72634295506848,1.44950472495604,0.576060012515731,2.8441000856536,1.21635129174099,1.74608627180206,1.94881234466693,4.11761400035207,3.17890167650024,3.36547258655913,2.80610101631697,3.73575864808146,3.50551310612999,3.93222122033678,3.99577311032985,3.84847366561318,3.3894301632655,0.680191150845634,2.66383144048878,2.69141569828427,3.35769232728157,0.772758376128762,2.62755465631655,1.09890974560359,1.2862102744744,0,0.564751842617067,0.460325236507177,1.71868654031819,0.171853182343688,0.685082519770642,0.755393897389701,1.35004500046361,0.45032120322422,0,0,2.69847103718859,3.19219898720825,2.56100408631201,1.94485373654635,1.67690530102386,1.65459157605013,1.55572709461131,1.03017528619447,0.64183841918363,1.26348605881899,1.2673964994512,0.943131706930381,1.40462261204824,0.832326981263301,1.03383844120104,0.952587382566147,0.695305955669133,0.964546102318525,2.47251540481984,1.47198920134397,2.40008476669791,1.59728225543404,0.953744759789284,1.45346416632329,0.658765662907314,1.18460451048347,0.548783918618318,0.789209134313529,1.35804113845862,0.561142271657738,0.830445126869219,1.18205378850676,1.22769312950907,0.77468420592983,1.15743966588685,1.24905288968973,1.16965804222704,2.36358159453128,0.956441660344217,0.661774257358546,0.695603506861264 | |phase1_expression=2.24208385946712,0.348975407639361,0,0,0,1.17515490338323,1.63528848416868,2.96983643915625,5.34997144176334,3.7450324211519,6.16384685611818,6.78063351460359,2.73921167889929,3.14713448708391,2.33176833270964,0.607425802169478,0.699561878128147,1.73504190947031,1.50825876966313,4.2438965179803,0.510259740906419,1.58865521921416,0.783599367416806,0.639969691173627,0.68822784320151,0.57423196411502,0.86152399231815,0.861884930743556,0.190023419456374,0,0.443461021310609,1.27006134691926,2.46025915033828,0,0.577703239502549,0.332469290716985,0.612508068787107,0.837063261473815,1.5626706890476,2.09409497589519,2.35292595212406,2.04913645487534,1.94204141212461,1.1330713617802,1.52065396829272,1.28482726513177,0.782391344348039,0,0,0.58328969722285,0.979904951377538,0,1.67782606057736,2.17608642603403,2.35265659399725,0.514518872071894,0,0,0.809265843438391,2.11596391708813,1.26766280701236,0,0,0,0,0.7104801149461,0.299600110518405,0.768436610643109,2.69592992002042,2.70011876663381,2.73422449756797,0.571301968807607,0,2.57230678351403,1.82106394934649,1.83843757322004,0,0.510749352340751,0.614426133024974,2.50583946687368,1.18933936683133,1.04182674111352,1.3959149950069,0.56276261003168,0.763991238884051,0.589257170947335,0.427115042397309,2.05039390407831,2.57469057332826,1.51143120213571,0,1.72084775396277,3.39985666853875,0.539703191637817,0,0,0.421333260395256,0.340860645156116,1.03914401841148,1.41335829804136,1.12674735821344,0,0,0,2.16491041011214,3.29367825117628,1.01104889002957,0.34255163915718,2.58937883647172,1.48442139064825,2.25530924795977,2.13125834818499,1.38369298353635,0.753613202763113,1.05829836422134,0.628332956648377,2.22475470960936,0.433798070759735,0,1.13236794963186,1.32504911076236,1.45462575940567,1.86391761218122,0.878342391034642,0,0.510914110417183,1.67741174308288,1.19980546198682,1.01656181658452,0.149790639404823,1.37250180845588,3.14135880282161,0.695297280769106,0.511430914660661,0.62336413367868,0.324482526135515,1.52759045775474,0.622034853050465,0.505445516867349,0.420883711772948,2.99277018814219,2.29902104433473,2.88099407688559,1.35634336052144,2.17716797284249,1.92170580427275,1.40552586839593,1.03481348295606,1.94011193639558,3.40390944302075,2.28736461413134,1.53437012699302,1.39023624612799,0.696504333044333,0.61734640922383,2.38841120182192,0.702213187313235,1.28673953557358,1.42081749697796,1.24275463521301,2.81431271977315,1.98068267607116,2.13070262026689,1.77087808572663,0.617068451549513,0.232533944750408,0.536546802799238,1.28441876603886,1.15191894939436,0.32833492815819,0.405344047729279,0.292399974850665,0.439100230582101,0.402619256281115,1.26173969138476,2.98423375899925,0.330418782983798,0.793351699990633,2.77274725695804,2.55460339046482,1.54640953586512,1.00841762311671,1.11189021922435,0.190225626112559,0,0,2.01068167040216,0.994782360205754,0,1.79763881730844,0,0.199141273254367,1.32767530667157,1.37098215131675,1.1270773567308,1.01825663922657,0.969762435838129,1.19230893813542,0.505892296994058,0.442830443938806,0.627994911365499,0.616985819609003,1.48226313543574,2.00214126859313,0.982794975566015,2.24862112384854,2.84004169943904,1.20588579876208,1.01850340712568,1.43848068725405,0.486405680325106,1.92192989231657,0,0.744281895337007,1.5601883655728,0.505157755894224,1.07638448113147,0.482443521363367,0.923765950833023,3.03186258832776,1.79261474086228,1.86719594352707,1.64283173801951,1.50755631697634,0,0.390267295715598,0.472905432318573,0.44292937929755,0.797273843287435,0.327726629431476,0.690739927463582,0.144649058581512,0,0.54390568381871,0.983528546038072,0.827810238914197,0,0.234423373184406,2.78689407140348,0.252470927204373,1.57754109708128,1.56175497718655,0.861693590931196,2.38968797952552,0.668396022247182,1.41538265394416,0.809621403349789,1.16902343164525,2.37172666767914,1.60660658210904,1.41940085208269,1.24645922567079,1.79175655288934,0.659880491890142,0,1.45668381692989,1.81394134178851,1.13163047853539,0.885905678642318,0.614870295887855,1.55056975900933,0.727067458955011,0,0.948110273807448,0,0,0.340439605753788,1.8006109403131,1.68166288917581,1.28602221018955,1.41872186913819,1.24858172321449,1.97458824722545,0.608929898229199,1.87737366450968,2.96564899209348,0.661585194164886,0.49465875882444,1.45317984026315,1.08563264870681,1.43246812803764,0.492422699235184,0,0.18542530201051,0.683483523191411,0.82554747185289,1.11116716421827,1.13021074202815,2.05041341581538,2.74533807847827,1.86976272993241,2.09927178485487,2.07299960706636,0.954670618015114,2.21435195506795,1.62655573701479,1.94409613479242,1.04544148007234,0.87345025498471,0.809186078308924,0.909188012978695,1.04702376793612,0.388844919875379,0,0.56369293868419,2.69129782879162,1.65458490457098,1.16670713006429,1.6790777052105,2.36538575687089,3.0512882047896,1.95306577265925,2.72634295506848,1.44950472495604,0.576060012515731,2.8441000856536,1.21635129174099,1.74608627180206,1.94881234466693,4.11761400035207,3.17890167650024,3.36547258655913,2.80610101631697,3.73575864808146,3.50551310612999,3.93222122033678,3.99577311032985,3.84847366561318,3.3894301632655,0.680191150845634,2.66383144048878,2.69141569828427,3.35769232728157,0.772758376128762,2.62755465631655,1.09890974560359,1.2862102744744,0,0.564751842617067,0.460325236507177,1.71868654031819,0.171853182343688,0.685082519770642,0.755393897389701,1.35004500046361,0.45032120322422,0,0,2.69847103718859,3.19219898720825,2.56100408631201,1.94485373654635,1.67690530102386,1.65459157605013,1.55572709461131,1.03017528619447,0.64183841918363,1.26348605881899,1.2673964994512,0.943131706930381,1.40462261204824,0.832326981263301,1.03383844120104,0.952587382566147,0.695305955669133,0.964546102318525,2.47251540481984,1.47198920134397,2.40008476669791,1.59728225543404,0.953744759789284,1.45346416632329,0.658765662907314,1.18460451048347,0.548783918618318,0.789209134313529,1.35804113845862,0.561142271657738,0.830445126869219,1.18205378850676,1.22769312950907,0.77468420592983,1.15743966588685,1.24905288968973,1.16965804222704,2.36358159453128,0.956441660344217,0.661774257358546,0.695603506861264 | ||
|short_description=p4@Nup54 | |short_description=p4@Nup54 | ||
}} | }} |
Latest revision as of 09:19, 26 September 2015
Short description: | p4@Nup54 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Nup54_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000038514_5end |
EntrezGene: | Nup54 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.96e-07 | 9 |
alpha-beta T cell | 7.96e-07 | 9 |
immature T cell | 7.96e-07 | 9 |
mature T cell | 7.96e-07 | 9 |
immature alpha-beta T cell | 7.96e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.14e-09 | 23 |
neck | 1.14e-09 | 23 |
respiratory system epithelium | 1.14e-09 | 23 |
hemolymphoid system gland | 1.14e-09 | 23 |
pharyngeal epithelium | 1.14e-09 | 23 |
thymic region | 1.14e-09 | 23 |
pharyngeal gland | 1.14e-09 | 23 |
entire pharyngeal arch endoderm | 1.14e-09 | 23 |
thymus primordium | 1.14e-09 | 23 |
early pharyngeal endoderm | 1.14e-09 | 23 |
segment of respiratory tract | 2.12e-09 | 27 |
anterior region of body | 2.86e-09 | 43 |
craniocervical region | 3.39e-09 | 36 |
pharynx | 8.08e-09 | 24 |
gland of gut | 8.08e-09 | 24 |
upper respiratory tract | 8.08e-09 | 24 |
chordate pharynx | 8.08e-09 | 24 |
pharyngeal arch system | 8.08e-09 | 24 |
pharyngeal region of foregut | 8.08e-09 | 24 |
hemopoietic organ | 2.19e-08 | 29 |
immune organ | 2.19e-08 | 29 |
mixed endoderm/mesoderm-derived structure | 3.00e-07 | 35 |